Cp4.1LG19g02310 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g02310
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	HTH myb-type domain-containing protein
Location	Cp4.1LG19: 2031934 .. 2032833 (+)
RNA-Seq Expression	Cp4.1LG19g02310
Synteny	Cp4.1LG19g02310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAAGAGCATTCGAATTGGTTCTCGAGATGGGAAGAGGAGCTTCCATCTCCAGATGAACTCATGCCTCTTTCTCAAACCCTAATAACCCCCGATCTAGCTTTAGCTTTCGATATTCAAAATCCCACCAATTGCAGTCCGCCGTTGCCTTGCCCATCTCCGCCGCTTTCGAATCCCCTACCCGGCTCCGGCAACGGAATTCCGCTGCCCAACTCGGGGGATTTCGGCGATTCCGCTGATTTAGGCTCCGGCGCCGGCAGCGACGAACCAGCCCGGACCCTCAAGCGGCCACGCCTAGTCTGGACTCCACAGCTCCACAAGCGATTCGTTGACGCTGTTGCCCATTTGGGGATCAAAAATGCTGTCCCTAAGACCATAATGCAGCTCATGAGTGTTGATGGCTTAACCAGAGAGAACGTAGCTAGCCATTTGCAGAAGTACCGTCTCTATCTCAAGCGTATGCAGGGTTTATCCAGTGGGGGTGGCGGCGCCGCCGCAGCTGGCTTGGTTGCTTCCTCTGATCCCGCCACCGACCATTTGTGCGCTAGCTCCCCTGTTCCACCCCATTTGCTTCACTCCGCTCGTGCTAGTTCAGACCACTTCATGCCCTTTGTTCCCATGGCCACTCTACAGCAGCACCACCACCACCTGCAGCAGATGGCCGCAGCTTCTGTCGTCGCCCACCCTCAGCTCCAGCCCCCCTATCATCGTGGGCAGTTTGGGTCACCATCAAACGGCCAATTTGAGCATCCATTTTTAGGTAGACAGTCCCAACCTATCCATAGAATGGGGGCACCAGTGCATAATTCAGTTCCTAATTACATTGAGGATTTGGAATCAGGCAATGCCAGTGGAGGAAGAAAAGTCCTCACCTTATTTCCTACTGGGGATGATTGA

mRNA sequence

ATGAGGGAAGAGCATTCGAATTGGTTCTCGAGATGGGAAGAGGAGCTTCCATCTCCAGATGAACTCATGCCTCTTTCTCAAACCCTAATAACCCCCGATCTAGCTTTAGCTTTCGATATTCAAAATCCCACCAATTGCAGTCCGCCGTTGCCTTGCCCATCTCCGCCGCTTTCGAATCCCCTACCCGGCTCCGGCAACGGAATTCCGCTGCCCAACTCGGGGGATTTCGGCGATTCCGCTGATTTAGGCTCCGGCGCCGGCAGCGACGAACCAGCCCGGACCCTCAAGCGGCCACGCCTAGTCTGGACTCCACAGCTCCACAAGCGATTCGTTGACGCTGTTGCCCATTTGGGGATCAAAAATGCTGTCCCTAAGACCATAATGCAGCTCATGAGTGTTGATGGCTTAACCAGAGAGAACGTAGCTAGCCATTTGCAGAAGTACCGTCTCTATCTCAAGCGTATGCAGGGTTTATCCAGTGGGGGTGGCGGCGCCGCCGCAGCTGGCTTGGTTGCTTCCTCTGATCCCGCCACCGACCATTTGTGCGCTAGCTCCCCTGTTCCACCCCATTTGCTTCACTCCGCTCGTGCTAGTTCAGACCACTTCATGCCCTTTGTTCCCATGGCCACTCTACAGCAGCACCACCACCACCTGCAGCAGATGGCCGCAGCTTCTGTCGTCGCCCACCCTCAGCTCCAGCCCCCCTATCATCGTGGGCAGTTTGGGTCACCATCAAACGGCCAATTTGAGCATCCATTTTTAGGTAGACAGTCCCAACCTATCCATAGAATGGGGGCACCAGTGCATAATTCAGTTCCTAATTACATTGAGGATTTGGAATCAGGCAATGCCAGTGGAGGAAGAAAAGTCCTCACCTTATTTCCTACTGGGGATGATTGA

Coding sequence (CDS)

ATGAGGGAAGAGCATTCGAATTGGTTCTCGAGATGGGAAGAGGAGCTTCCATCTCCAGATGAACTCATGCCTCTTTCTCAAACCCTAATAACCCCCGATCTAGCTTTAGCTTTCGATATTCAAAATCCCACCAATTGCAGTCCGCCGTTGCCTTGCCCATCTCCGCCGCTTTCGAATCCCCTACCCGGCTCCGGCAACGGAATTCCGCTGCCCAACTCGGGGGATTTCGGCGATTCCGCTGATTTAGGCTCCGGCGCCGGCAGCGACGAACCAGCCCGGACCCTCAAGCGGCCACGCCTAGTCTGGACTCCACAGCTCCACAAGCGATTCGTTGACGCTGTTGCCCATTTGGGGATCAAAAATGCTGTCCCTAAGACCATAATGCAGCTCATGAGTGTTGATGGCTTAACCAGAGAGAACGTAGCTAGCCATTTGCAGAAGTACCGTCTCTATCTCAAGCGTATGCAGGGTTTATCCAGTGGGGGTGGCGGCGCCGCCGCAGCTGGCTTGGTTGCTTCCTCTGATCCCGCCACCGACCATTTGTGCGCTAGCTCCCCTGTTCCACCCCATTTGCTTCACTCCGCTCGTGCTAGTTCAGACCACTTCATGCCCTTTGTTCCCATGGCCACTCTACAGCAGCACCACCACCACCTGCAGCAGATGGCCGCAGCTTCTGTCGTCGCCCACCCTCAGCTCCAGCCCCCCTATCATCGTGGGCAGTTTGGGTCACCATCAAACGGCCAATTTGAGCATCCATTTTTAGGTAGACAGTCCCAACCTATCCATAGAATGGGGGCACCAGTGCATAATTCAGTTCCTAATTACATTGAGGATTTGGAATCAGGCAATGCCAGTGGAGGAAGAAAAGTCCTCACCTTATTTCCTACTGGGGATGATTGA

Protein sequence

MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNPLPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDHLCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQFGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTGDD

Homology

[Close]

BLAST of Cp4.1LG19g02310 vs. ExPASy Swiss-Prot
Match: O22210 (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.4e-60
Identity = 136/234 (58.12%), Postives = 156/234 (66.67%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP----------------- 60
           MRE++ NWF RWEEELPSP+EL+P+SQTLITP LALAF I +P                 
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -TNCSPPLPCPSPPLSNPLPGSGNGIPLPNSGDF--GDSADLGSGAGSDEPARTLKRPRL 120
            ++ +P  P P+PP            P+  + DF  GDS DLGSG+   EPARTLKRPRL
Sbjct: 61  QSSTTPTTPTPTPP------------PMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPRL 120

Query: 121 VWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS 180
           VWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG   
Sbjct: 121 VWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG--- 180

Query: 181 GGGGAAAAGLVASSDPATDHLCASSPVPPHLLHSARASSDHFMPFVPMATLQQH 215
           G G     G V  SD ATD L ASSPVP H L     S D+ MP +  + + +H
Sbjct: 181 GNGNGITGGHVIVSDSATDRLFASSPVPAHFL-----SPDYLMPPLEHSYMGKH 214

[Close]

BLAST of Cp4.1LG19g02310 vs. ExPASy Swiss-Prot
Match: Q9SNB4 (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.7e-35
Identity = 121/304 (39.80%), Postives = 153/304 (50.33%), Query Frame = 0


Query: 10  SRWEEELPSPDELMPLSQTLITPDLALAFDI-------------QNPTNCSPPLPCPSPP 69
           S WE  LPS ++L  LS +LI P+LA+AF I              + T  S      S P
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  --------------LSNPLPGSGNGIPLPNSGDFGD----------SADLGSGAGSDEPA 129
                         + +  PGS +     ++GD  D          +A+ G     D   
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTEDLSG 139

Query: 130 RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYL 189
           +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYL
Sbjct: 140 KTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYL 199

Query: 190 KRMQGLSSGGGGAAAAGLVASSDPATDHLCASSPVPPHL---LHSARASSDHFMPFVPMA 249
           KRMQGL++ G              A+D L +S+PVPP     +     SS +    +P A
Sbjct: 200 KRMQGLTNEG------------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIPGA 259

Query: 250 TLQQHHHHLQQMAAASVVAHPQLQPPY-------------HRGQFGSPSNGQFE-HPFLG 260
                 +  QQM    V AH      Y             HR   G+  NG FE +P++ 
Sbjct: 260 ------YGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNPYMM 305

[Close]

BLAST of Cp4.1LG19g02310 vs. ExPASy Swiss-Prot
Match: Q94DH3 (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.1e-34
Identity = 105/235 (44.68%), Postives = 122/235 (51.91%), Query Frame = 0


Query: 12  WEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLP------------CPSPPLSN 71
           WE  LP  DEL PLSQ L+   LA AF I       PP P                 L  
Sbjct: 22  WETGLPGADELTPLSQPLVPAGLAAAFRI-------PPEPGRTLLDVHRASAATVSRLRR 81

Query: 72  PLPGSGNGIPL---PNSGDFGDSADLGSGA---GSDEPARTLKRPRLVWTPQLHKRFVDA 131
               S +  P      +G   D A+ G GA     +    + KR RLVWTPQLHKRFV+ 
Sbjct: 82  ASSSSSSSFPAFASKGAGTGADEAESGGGADGGNGNTNNSSSKRARLVWTPQLHKRFVEV 141

Query: 132 VAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVAS 191
           VAHLG+KNAVPKTIMQLM+V+GLTRENVASHLQKYRLY+KRMQGLS+ G           
Sbjct: 142 VAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEG----------- 201

Query: 192 SDPATDHLCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVA 229
               +DH+ AS+PVP   LH    S  H  P         HHH     A A+ V+
Sbjct: 202 -PSPSDHIFASTPVPHASLHDQVPSPYHPHP---------HHHSYNNAAYAATVS 228

[Close]

BLAST of Cp4.1LG19g02310 vs. ExPASy Swiss-Prot
Match: Q9LTH4 (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-33
Identity = 98/229 (42.79%), Postives = 125/229 (54.59%), Query Frame = 0


Query: 12  WEEELPSPDELMPLSQTLITPDLALAF----------------------DIQNPTNCSPP 71
           WE  LP+ D+L PLSQ L+   LALAF                       +++ TN S  
Sbjct: 29  WEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASSV 88

Query: 72  LPCPSPPLSNPLPGSGNGIPLPNSGDFG-----DSADLGSGAGSDEPARTLKRPRLVWTP 131
           +      + + +PGS       + G         +A+ G     D   +T KRPRLVWTP
Sbjct: 89  MEEVVDRVESSVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVWTP 148

Query: 132 QLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGG 191
           QLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QGL++    
Sbjct: 149 QLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTT---- 208

Query: 192 AAAAGLVASSDP--ATDHLCASSPVPPHLLHSARASSDHFMPFVPMATL 212
                     DP  ++D L +S+PVPP        S+      VP+ ++
Sbjct: 209 --------EEDPYSSSDQLFSSTPVPPQSFQDGGGSNGKLGVPVPVPSM 245

[Close]

BLAST of Cp4.1LG19g02310 vs. ExPASy Swiss-Prot
Match: Q940D0 (Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 4.4e-20
Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 85  GAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 144
           G   DE A  LK+PR+VW+ +LH++FV AV  LG++ AVPK I++LM+V GLTRENVASH
Sbjct: 225 GDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASH 284

Query: 145 LQKYRLYLKRMQGLSSGGG 164
           LQKYR+YL+R+ G+S   G
Sbjct: 285 LQKYRIYLRRLGGVSQHQG 303

[Close]

BLAST of Cp4.1LG19g02310 vs. NCBI nr
Match: XP_023517309.1 (transcription factor MYBC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 606 bits (1563), Expect = 7.28e-219
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180

Query: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ 240
           LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ
Sbjct: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ 240

Query: 241 FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTGDD 299
           FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTGDD
Sbjct: 241 FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTGDD 299

[Close]

BLAST of Cp4.1LG19g02310 vs. NCBI nr
Match: XP_022925141.1 (transcription factor MYBC1-like [Cucurbita moschata] >KAG6595431.1 Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027434.1 Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 598 bits (1541), Expect = 1.65e-215
Identity = 296/299 (99.00%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGG AAAAGLVASSDPATDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGAAAAAGLVASSDPATDH 180

Query: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ 240
           L ASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ
Sbjct: 181 LFASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ 240

Query: 241 FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTGDD 299
           FGSPSNGQFEHPFLGRQSQPIHRMGAPVH+SVPNYIEDLESGNASGGRKVLTLFPTGDD
Sbjct: 241 FGSPSNGQFEHPFLGRQSQPIHRMGAPVHSSVPNYIEDLESGNASGGRKVLTLFPTGDD 299

[Close]

BLAST of Cp4.1LG19g02310 vs. NCBI nr
Match: XP_022966125.1 (transcription factor MYBC1-like [Cucurbita maxima])

HSP 1 Score: 598 bits (1541), Expect = 1.65e-215
Identity = 295/299 (98.66%), Postives = 296/299 (99.00%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGG AAAGLVASSDPATDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGAAAGLVASSDPATDH 180

Query: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ 240
           L ASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAAS VAHPQLQPPYHRGQ
Sbjct: 181 LFASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASAVAHPQLQPPYHRGQ 240

Query: 241 FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTGDD 299
           FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNS+PNYIEDLESGNASGGRKVLTLFPTGDD
Sbjct: 241 FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSLPNYIEDLESGNASGGRKVLTLFPTGDD 299

[Close]

BLAST of Cp4.1LG19g02310 vs. NCBI nr
Match: XP_004144322.1 (transcription factor MYBC1 [Cucumis sativus] >KGN54684.1 hypothetical protein Csa_012282 [Cucumis sativus])

HSP 1 Score: 539 bits (1389), Expect = 2.61e-192
Identity = 273/302 (90.40%), Postives = 279/302 (92.38%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQNP+N SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI  PNS DFGDSADLGSGA SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGGG  AA LV SSDPATDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAA-LVGSSDPATDH 180

Query: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVA-HPQLQPPYHR- 240
           L ASSPVPPHLLHSAR SSDHF+P+VPMATLQQHHHH QQMAAA+ VA H QLQPPYHR 
Sbjct: 181 LFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQ 240

Query: 241 -GQFGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTG 299
            G FGSP NGQFEHPFL RQSQPIHRMG PVHNSVPNYIEDLES NA+GGRKVLTLFPTG
Sbjct: 241 VGHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTG 300

[Close]

BLAST of Cp4.1LG19g02310 vs. NCBI nr
Match: XP_038882973.1 (transcription factor MYBC1-like [Benincasa hispida])

HSP 1 Score: 538 bits (1387), Expect = 5.27e-192
Identity = 274/302 (90.73%), Postives = 277/302 (91.72%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP+N SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI  PNS DFGDSADLGSGA  DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGGG   A LV SSDPATDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGGA-LVGSSDPATDH 180

Query: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVA-HPQLQPPYHR- 240
           L ASSPVPPHLLHSAR SSDHF+PFVPMATLQQHHHH QQMAAA+ VA H QLQPPYHR 
Sbjct: 181 LFASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVASHSQLQPPYHRQ 240

Query: 241 -GQFGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTG 299
            G FGSP NGQFEHPFL RQSQPIHRMGA VHNSVPNYIEDLES NASGGRKVLTLFPTG
Sbjct: 241 VGHFGSPPNGQFEHPFLARQSQPIHRMGASVHNSVPNYIEDLESANASGGRKVLTLFPTG 300

[Close]

BLAST of Cp4.1LG19g02310 vs. ExPASy TrEMBL
Match: A0A6J1HQR7 (transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111465901 PE=4 SV=1)

HSP 1 Score: 598 bits (1541), Expect = 7.97e-216
Identity = 295/299 (98.66%), Postives = 296/299 (99.00%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGG AAAGLVASSDPATDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGAAAGLVASSDPATDH 180

Query: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ 240
           L ASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAAS VAHPQLQPPYHRGQ
Sbjct: 181 LFASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASAVAHPQLQPPYHRGQ 240

Query: 241 FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTGDD 299
           FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNS+PNYIEDLESGNASGGRKVLTLFPTGDD
Sbjct: 241 FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSLPNYIEDLESGNASGGRKVLTLFPTGDD 299

[Close]

BLAST of Cp4.1LG19g02310 vs. ExPASy TrEMBL
Match: A0A6J1EBD5 (transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111432475 PE=4 SV=1)

HSP 1 Score: 598 bits (1541), Expect = 7.97e-216
Identity = 296/299 (99.00%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGG AAAAGLVASSDPATDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGAAAAAGLVASSDPATDH 180

Query: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ 240
           L ASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ
Sbjct: 181 LFASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVAHPQLQPPYHRGQ 240

Query: 241 FGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTGDD 299
           FGSPSNGQFEHPFLGRQSQPIHRMGAPVH+SVPNYIEDLESGNASGGRKVLTLFPTGDD
Sbjct: 241 FGSPSNGQFEHPFLGRQSQPIHRMGAPVHSSVPNYIEDLESGNASGGRKVLTLFPTGDD 299

[Close]

BLAST of Cp4.1LG19g02310 vs. ExPASy TrEMBL
Match: A0A0A0L0V3 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G425730 PE=4 SV=1)

HSP 1 Score: 539 bits (1389), Expect = 1.26e-192
Identity = 273/302 (90.40%), Postives = 279/302 (92.38%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQNP+N SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI  PNS DFGDSADLGSGA SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGGG  AA LV SSDPATDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAA-LVGSSDPATDH 180

Query: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVA-HPQLQPPYHR- 240
           L ASSPVPPHLLHSAR SSDHF+P+VPMATLQQHHHH QQMAAA+ VA H QLQPPYHR 
Sbjct: 181 LFASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQ 240

Query: 241 -GQFGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTG 299
            G FGSP NGQFEHPFL RQSQPIHRMG PVHNSVPNYIEDLES NA+GGRKVLTLFPTG
Sbjct: 241 VGHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTG 300

[Close]

BLAST of Cp4.1LG19g02310 vs. ExPASy TrEMBL
Match: A0A5A7SKT7 (Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00270 PE=4 SV=1)

HSP 1 Score: 536 bits (1381), Expect = 2.09e-191
Identity = 273/302 (90.40%), Postives = 277/302 (91.72%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP+N SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI  PNS DFGDSADLGSGA SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GG G  AA LV SSDPATDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAA-LVGSSDPATDH 180

Query: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVA-HPQLQPPYHR- 240
           L ASSPVPPHLLHSAR SSDHF+PFVPMATLQQHHHH QQMAAA+ VA H QLQPPYHR 
Sbjct: 181 LFASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQ 240

Query: 241 -GQFGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTG 299
            G FGSP NGQFEHPFL RQSQPIHRMG  VHNSVPNYIEDLES NA+GGRKVLTLFPTG
Sbjct: 241 VGHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTG 300

[Close]

BLAST of Cp4.1LG19g02310 vs. ExPASy TrEMBL
Match: A0A1S3C2U8 (transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103495840 PE=4 SV=1)

HSP 1 Score: 536 bits (1381), Expect = 2.09e-191
Identity = 273/302 (90.40%), Postives = 277/302 (91.72%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNCSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP+N SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI  PNS DFGDSADLGSGA SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GG G  AA LV SSDPATDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAA-LVGSSDPATDH 180

Query: 181 LCASSPVPPHLLHSARASSDHFMPFVPMATLQQHHHHLQQMAAASVVA-HPQLQPPYHR- 240
           L ASSPVPPHLLHSAR SSDHF+PFVPMATLQQHHHH QQMAAA+ VA H QLQPPYHR 
Sbjct: 181 LFASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQ 240

Query: 241 -GQFGSPSNGQFEHPFLGRQSQPIHRMGAPVHNSVPNYIEDLESGNASGGRKVLTLFPTG 299
            G FGSP NGQFEHPFL RQSQPIHRMG  VHNSVPNYIEDLES NA+GGRKVLTLFPTG
Sbjct: 241 VGHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTG 300

[Close]

BLAST of Cp4.1LG19g02310 vs. TAIR 10
Match: AT3G10760.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 337.8 bits (865), Expect = 8.8e-93
Identity = 211/348 (60.63%), Postives = 234/348 (67.24%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPT----NCSPP------L 60
           MRE+ S+WF+RWEEELPSP+ELMP+SQ+LI+PDLALAFDI+ P     N + P       
Sbjct: 1   MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQ 60

Query: 61  PCPSPPLSNPLPGSGNGIPLPNSGDF-GDSADLGS-GAGSDEPARTLKRPRLVWTPQLHK 120
             P  P    LP S       +S +F  DSADLGS GA  DEPARTLKRPRLVWTPQLHK
Sbjct: 61  TTPPTPSQLQLPSS----QANSSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHK 120

Query: 121 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAA 180
           RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGG     
Sbjct: 121 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGG----- 180

Query: 181 GLVASSDPATDHLCASSPVPPHLLHSARA-SSDHFMP-FVPMATLQQHHHHLQQMAAASV 240
              A SDPATD L ASSPVP H LH  R  SSDHFMP FVP+ATLQQ    +   AAA+ 
Sbjct: 181 ---AGSDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQ-QQQMAAAAAAAA 240

Query: 241 VAHPQLQPP-YHR---------------------GQFGSP---------SNGQFEHPFLG 300
            A+P LQPP +HR                     GQFGSP         +NG+F+  FL 
Sbjct: 241 AANPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSFLA 300

[Close]

BLAST of Cp4.1LG19g02310 vs. TAIR 10
Match: AT5G05090.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 276.6 bits (706), Expect = 2.4e-74
Identity = 172/308 (55.84%), Postives = 203/308 (65.91%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDI--QNPTNCSPPLPCPSPPLS 60
           MREE SNWF++WEEELPSP+EL+PLSQ+LITPDLA+AFD+   N +N   PLP  +P   
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHRNNNSNSGQPLPQTTP--- 60

Query: 61  NPLPGSGNGIPLPNSGDFGDSADLGSGAGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLG 120
                     P PNS     SA++   +  DEPARTLKRPRLVWTPQLHKRFVDAVAHLG
Sbjct: 61  ----------PQPNS-----SAEIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLG 120

Query: 121 IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGAAAAGLVASSDPAT 180
           IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM+   SGGGG  +          +
Sbjct: 121 IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK---SGGGGGGSGD--------S 180

Query: 181 DHLCASSPVPPHLLH-SARASSDHFMP-FVPMATLQQHHHHLQQMAAASVVAHPQLQPPY 240
           DHL ASSPVPPH LH ++R SSD F+P FVP++T QQH       A  S   H Q+    
Sbjct: 181 DHLFASSPVPPHFLHPTSRQSSDLFIPSFVPISTQQQH-----IAAPPSQFLHRQISAV- 240

Query: 241 HRGQFGSPSNGQFEHPFLGRQ----SQPIHRMGA-PVHNSVPNYIEDLESGNASGGRKVL 300
               F SP+    +  FL RQ     QP+ +  +  +H+ V NY +DL+    SG + VL
Sbjct: 241 ---NFTSPTKATDQAMFLARQQSELQQPVFKPSSLHLHSQVANYTQDLK----SGAKTVL 266

[Close]

BLAST of Cp4.1LG19g02310 vs. TAIR 10
Match: AT2G40970.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 232.3 bits (591), Expect = 5.2e-61
Identity = 136/234 (58.12%), Postives = 156/234 (66.67%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP----------------- 60
           MRE++ NWF RWEEELPSP+EL+P+SQTLITP LALAF I +P                 
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -TNCSPPLPCPSPPLSNPLPGSGNGIPLPNSGDF--GDSADLGSGAGSDEPARTLKRPRL 120
            ++ +P  P P+PP            P+  + DF  GDS DLGSG+   EPARTLKRPRL
Sbjct: 61  QSSTTPTTPTPTPP------------PMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPRL 120

Query: 121 VWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS 180
           VWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG   
Sbjct: 121 VWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG--- 180

Query: 181 GGGGAAAAGLVASSDPATDHLCASSPVPPHLLHSARASSDHFMPFVPMATLQQH 215
           G G     G V  SD ATD L ASSPVP H L     S D+ MP +  + + +H
Sbjct: 181 GNGNGITGGHVIVSDSATDRLFASSPVPAHFL-----SPDYLMPPLEHSYMGKH 214

[Close]

BLAST of Cp4.1LG19g02310 vs. TAIR 10
Match: AT3G46640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-36
Identity = 121/304 (39.80%), Postives = 153/304 (50.33%), Query Frame = 0


Query: 10  SRWEEELPSPDELMPLSQTLITPDLALAFDI-------------QNPTNCSPPLPCPSPP 69
           S WE  LPS ++L  LS +LI P+LA+AF I              + T  S      S P
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  --------------LSNPLPGSGNGIPLPNSGDFGD----------SADLGSGAGSDEPA 129
                         + +  PGS +     ++GD  D          +A+ G     D   
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTEDLSG 139

Query: 130 RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYL 189
           +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYL
Sbjct: 140 KTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYL 199

Query: 190 KRMQGLSSGGGGAAAAGLVASSDPATDHLCASSPVPPHL---LHSARASSDHFMPFVPMA 249
           KRMQGL++ G              A+D L +S+PVPP     +     SS +    +P A
Sbjct: 200 KRMQGLTNEG------------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIPGA 259

Query: 250 TLQQHHHHLQQMAAASVVAHPQLQPPY-------------HRGQFGSPSNGQFE-HPFLG 260
                 +  QQM    V AH      Y             HR   G+  NG FE +P++ 
Sbjct: 260 ------YGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNPYMM 305

[Close]

BLAST of Cp4.1LG19g02310 vs. TAIR 10
Match: AT3G46640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-36
Identity = 121/304 (39.80%), Postives = 153/304 (50.33%), Query Frame = 0


Query: 10  SRWEEELPSPDELMPLSQTLITPDLALAFDI-------------QNPTNCSPPLPCPSPP 69
           S WE  LPS ++L  LS +LI P+LA+AF I              + T  S      S P
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  --------------LSNPLPGSGNGIPLPNSGDFGD----------SADLGSGAGSDEPA 129
                         + +  PGS +     ++GD  D          +A+ G     D   
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTEDLSG 139

Query: 130 RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYL 189
           +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYL
Sbjct: 140 KTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYL 199

Query: 190 KRMQGLSSGGGGAAAAGLVASSDPATDHLCASSPVPPHL---LHSARASSDHFMPFVPMA 249
           KRMQGL++ G              A+D L +S+PVPP     +     SS +    +P A
Sbjct: 200 KRMQGLTNEG------------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIPGA 259

Query: 250 TLQQHHHHLQQMAAASVVAHPQLQPPY-------------HRGQFGSPSNGQFE-HPFLG 260
                 +  QQM    V AH      Y             HR   G+  NG FE +P++ 
Sbjct: 260 ------YGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNPYMM 305

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g02310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22210	7.4e-60	58.12	Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1	[more]
Q9SNB4	1.7e-35	39.80	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
Q94DH3	4.1e-34	44.68	Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 ...	[more]
Q9LTH4	1.2e-33	42.79	Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1	[more]
Q940D0	4.4e-20	59.49	Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE...	[more]

BLAST of Cp4.1LG19g02310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517309.1	7.28e-219	100.00	transcription factor MYBC1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022925141.1	1.65e-215	99.00	transcription factor MYBC1-like [Cucurbita moschata] >KAG6595431.1 Transcription...	[more]
XP_022966125.1	1.65e-215	98.66	transcription factor MYBC1-like [Cucurbita maxima]	[more]
XP_004144322.1	2.61e-192	90.40	transcription factor MYBC1 [Cucumis sativus] >KGN54684.1 hypothetical protein Cs...	[more]
XP_038882973.1	5.27e-192	90.73	transcription factor MYBC1-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG19g02310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQR7	7.97e-216	98.66	transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111465901 PE=4...	[more]
A0A6J1EBD5	7.97e-216	99.00	transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111432475 PE...	[more]
A0A0A0L0V3	1.26e-192	90.40	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G42573...	[more]
A0A5A7SKT7	2.09e-191	90.40	Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C2U8	2.09e-191	90.40	transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103495840 PE=4 SV=1	[more]

BLAST of Cp4.1LG19g02310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10760.1	8.8e-93	60.63	Homeodomain-like superfamily protein	[more]
AT5G05090.1	2.4e-74	55.84	Homeodomain-like superfamily protein	[more]
AT2G40970.1	5.2e-61	58.12	Homeodomain-like superfamily protein	[more]
AT3G46640.1	1.2e-36	39.80	Homeodomain-like superfamily protein	[more]
AT3G46640.2	1.2e-36	39.80	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 94..156 e-value: 7.7E-32 score: 111.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..62
None	No IPR available	PANTHER	PTHR31442:SF31	HOMEODOMAIN-LIKE PROTEIN-RELATED	coord: 1..299
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 101..149 e-value: 2.2E-8 score: 34.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 102..153 score: 11.409622
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 98..150 e-value: 3.1E-24 score: 83.0
IPR044841	Transcription factor LUX/BOA-like	PANTHER	PTHR31442	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..299
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 94..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g02310.1	Cp4.1LG19g02310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity