Cp4.1LG19g01200 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG19g01200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG19: 936032 .. 936551 (-)
RNA-Seq ExpressionCp4.1LG19g01200
SyntenyCp4.1LG19g01200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACAAAAAAGTCCAAGAATTTCTTCAAGGCAAGAAAAAAAATGGCAAAGAAGATGATGGCGGTGGTTCTAATGTGTGTGTTGGTGGTATCGGCGCTGCAATTCTCCACTCCTGACAAATCAACTGAAATGTAGGCCAAATTCAAGTCGTTCTTTAGCGACTTTAGCACCGTGGAGGCAAAATTTAAGTCGTGCGCTGCAACCTGCCAAAAGAAATGCACTAATGCTTCATGTCGTTCTAAGTGTGATGCAGATTGCGGCAAAAAGGAAGTTGAAAGTACATTTTCTATCTCTTTTAGACAAATCTTTTTAACATTCTAGACGAAAATGTATAACTCTTTATTCTAACTTATTAGTATACCTACAAATAGAATTGTTAGTGCAACCCTTAGTTTCTTTTTTATTTAAGTACGTGAGATTCTTATTTTTTAAATTTTTATTGTTTATTTTGCAGATAAATTTAAAATCAAGATACCCCATTGATAATCGAGCGTGAGATGAAAAGAAAACAGCTTCGAAGAA

mRNA sequence

GACAAAAAAGTCCAAGAATTTCTTCAAGGCAAGAAAAAAAATGGCAAAGAAGATGATGGCGGTGGTTCTAATGTGTGTGTTGGTGGTATCGGCGCTGCAATTCTCCACTCCTGACAAATCAACTGAAATGCCAAATTCAAGTCGTTCTTTAGCGACTTTAGCACCGTGGAGGCAAAATTTAAGTCGTGCGCTGCAACCTGCCAAAAGAAATGCACTAATGCTTCATGTCGTTCTAAGTGTGATGCAGATTGCGGCAAAAAGGAAGTTGAAAATAAATTTAAAATCAAGATACCCCATTGATAATCGAGCGTGAGATGAAAAGAAAACAGCTTCGAAGAA

Coding sequence (CDS)

ATGGCAAAGAAGATGATGGCGGTGGTTCTAATGTGTGTGTTGGTGGTATCGGCGCTGCAATTCTCCACTCCTGACAAATCAACTGAAATGCCAAATTCAAGTCGTTCTTTAGCGACTTTAGCACCGTGGAGGCAAAATTTAAGTCGTGCGCTGCAACCTGCCAAAAGAAATGCACTAATGCTTCATGTCGTTCTAAGTGTGATGCAGATTGCGGCAAAAAGGAAGTTGAAAATAAATTTAAAATCAAGATACCCCATTGATAATCGAGCGTGA

Protein sequence

MAKKMMAVVLMCVLVVSALQFSTPDKSTEMPNSSRSLATLAPWRQNLSRALQPAKRNALMLHVVLSVMQIAAKRKLKINLKSRYPIDNRA
Homology
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BLAST of Cp4.1LG19g01200 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 52.8 bits (125), Expect = 1.32e-06
Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 1  MAKKMMAVVLMCVLVVSALQFSTPDKSTEMPNSSRS 36
          MAKKMMAVVLMCVLVVSALQFST DKSTEM    +S
Sbjct: 1  MAKKMMAVVLMCVLVVSALQFSTADKSTEMEAKFKS 36

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g01200 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG19g01200 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6595593.11.32e-0683.33hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cp4.1LG19g01200 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG19g01200 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g01200.1Cp4.1LG19g01200.1mRNA