Cp4.1LG19g01170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATCATCCACACATTAAGAAACCAAGAAAGGAACAAAAAGGGGAGGAATTTTTCTTTTAAGGTAAAAAAATATTTTAAAAAATGGCGAAGAAGATGACGGCAGTGCTTCTAACGTGCGTTGTGTTGGTATCCGCATTGCAATTCTCCACTGCTGATAGCCCAGCTGAAATGGAGGCCAGATTCAAGTCGTTCTTCGGTGACTTGAGCGGCGTGGAGGCAAAATTTAAGTCGTGTGCTGCAACCTGCGAGAAGGAATGTGTGGCCAAAGGCGAGACCAGTGAATCATGCAAACCAAAGTGTGAGACAGATTGCGGCAAAAAGGAAGTTTCAGGTATATCTTTTTTTTGTCTCTTAAGAAAACGGTAAAATAATTTTTCTCNCTCTTAAGAGAACGGTAAAATAATTTTTCTCAAAAATTTTACACTTTGTGTATTAATGTTAATTTTTGTTGTGCTTATTTTGCAGAGAAGTTTAACATCCATCTAACCTGATGAGATGGAAAGGGAAGGAAGAGCTCAGCATAGTGATCGATTTGGTTTAGAACATCGTTATAATTTATTTAAATAATTCTTGTGAAAGGAATTTTTAAAATTCTCTTTCATTTTTGTAATGTATTTATTTTTTTTTATTATAAAACGTTTCTTTAATATTGTTGGTTTCTTTGATCAACGAAC CAATCATCCACACATTAAGAAACCAAGAAAGGAACAAAAAGGGGAGGAATTTTTCTTTTAAGGTAAAAAAATATTTTAAAAAATGGCGAAGAAGATGACGGCAGTGCTTCTAACGTGCGTTGTGTTGGTATCCGCATTGCAATTCTCCACTGCTGATAGCCCAGCTGAAATGGAGGCCAGATTCAAGTCGTTCTTCGGTGACTTGAGCGGCGTGGAGGCAAAATTTAAGTCGTGTGCTGCAACCTGCGAGAAGGAATGTGTGGCCAAAGGCGAGACCAGTGAATCATGCAAACCAAAGTGTGAGACAGATTGCGGCAAAAAGGAAGTTTCAGAGAAGTTTAACATCCATCTAACCTGATGAGATGGAAAGGGAAGGAAGAGCTCAGCATAGTGATCGATTTGGTTTAGAACATCGTTATAATTTATTTAAATAATTCTTGTGAAAGGAATTTTTAAAATTCTCTTTCATTTTTGTAATGTATTTATTTTTTTTTATTATAAAACGTTTCTTTAATATTGTTGGTTTCTTTGATCAACGAAC ATGGCGAAGAAGATGACGGCAGTGCTTCTAACGTGCGTTGTGTTGGTATCCGCATTGCAATTCTCCACTGCTGATAGCCCAGCTGAAATGGAGGCCAGATTCAAGTCGTTCTTCGGTGACTTGAGCGGCGTGGAGGCAAAATTTAAGTCGTGTGCTGCAACCTGCGAGAAGGAATGTGTGGCCAAAGGCGAGACCAGTGAATCATGCAAACCAAAGTGTGAGACAGATTGCGGCAAAAAGGAAGTTTCAGAGAAGTTTAACATCCATCTAACCTGA MAKKMTAVLLTCVVLVSALQFSTADSPAEMEARFKSFFGDLSGVEAKFKSCAATCEKECVAKGETSESCKPKCETDCGKKEVSEKFNIHLT Homology
BLAST of Cp4.1LG19g01170 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.7e-04 Identity = 22/41 (53.66%), Postives = 26/41 (63.41%), Query Frame = 0
BLAST of Cp4.1LG19g01170 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 167 bits (424), Expect = 4.91e-52 Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Cp4.1LG19g01170 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114 bits (284), Expect = 9.74e-31 Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 0
BLAST of Cp4.1LG19g01170 vs. NCBI nr
Match: KAG6595591.1 (hypothetical protein SDJN03_12144, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100 bits (249), Expect = 2.15e-25 Identity = 54/91 (59.34%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of Cp4.1LG19g01170 vs. NCBI nr
Match: KAG6595588.1 (hypothetical protein SDJN03_12141, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.8 bits (247), Expect = 4.33e-25 Identity = 53/91 (58.24%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of Cp4.1LG19g01170 vs. NCBI nr
Match: KAG6595589.1 (hypothetical protein SDJN03_12142, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.8 bits (247), Expect = 4.33e-25 Identity = 53/91 (58.24%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of Cp4.1LG19g01170 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 8.33e-17 Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of Cp4.1LG19g01170 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.56e-16 Identity = 43/93 (46.24%), Postives = 60/93 (64.52%), Query Frame = 0
BLAST of Cp4.1LG19g01170 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.56e-16 Identity = 43/93 (46.24%), Postives = 60/93 (64.52%), Query Frame = 0
BLAST of Cp4.1LG19g01170 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.35e-16 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 0
BLAST of Cp4.1LG19g01170 vs. ExPASy TrEMBL
Match: A0A5A7T8P0 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002620 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.84e-15 Identity = 43/93 (46.24%), Postives = 56/93 (60.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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