Cp4.1LG19g01130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCATCACAATCAAATTAAGAAAAAAAAACATAAAAAAGGAAAAAAAAAGTCGAAGAATTTTCTTCAAGGCAAGAAAAAAATGGCAAAGAAGATGATGGCAGTGGTTCTAATGTGTGTTTTGATGGTATCCGTACTGCAATTCTCCACTGCTGACAAATCATCAGCTGAAATGGAGGCAAAATTCAAGTCGTTCTTTAATGACTTTGGCTCCGTGGAAGCAAATTTTAAGACGTGTTCTGCAACCTGCCATAAGAAATGCGCTGATGCTGCATGTCGTAATAAGTGTGACGCAGATTGCGGCAAAAAGGAAGTTGAAAGTACATTTTTCTATCTCTTTAGACAAAAATCATTTTAACATTCAATATCAGAAAATGTATTAACTTTTTATTCTAACCTATTAATATATCTACAAATACAATAGTTGTTGCAACCCTTAGTTTAAACGTATAATTTTCTCATCGAATTTTGGTCGATTTACTCAATAGAAGTGAAGTTTGATTTCATATCAAATTTGACTTTCTTTTTTATTTAAGTTTGTGAGATTCTTACTTTTTAATTTTGTGCATTATTATTAATTTTTGTTGTGCTTATTTTGCAGATAAATTTAAGATCAAGATACCCCATTGATAATCGAGGAGGATAAAATGAAAGTGAGCGGTGAAAAA TCATCACAATCAAATTAAGAAAAAAAAACATAAAAAAGGAAAAAAAAAGTCGAAGAATTTTCTTCAAGGCAAGAAAAAAATGGCAAAGAAGATGATGGCAGTGGTTCTAATGTGTGTTTTGATGGTATCCGTACTGCAATTCTCCACTGCTGACAAATCATCAGCTGAAATGGAGGCAAAATTCAAGTCGTTCTTTAATGACTTTGGCTCCGTGGAAGCAAATTTTAAGACGTGTTCTGCAACCTGCCATAAGAAATGCGCTGATGCTGCATGTCGTAATAAGTGTGACGCAGATTGCGGCAAAAAGGAAGTTGAAAATAAATTTAAGATCAAGATACCCCATTGATAATCGAGGAGGATAAAATGAAAGTGAGCGGTGAAAAA ATGGCAAAGAAGATGATGGCAGTGGTTCTAATGTGTGTTTTGATGGTATCCGTACTGCAATTCTCCACTGCTGACAAATCATCAGCTGAAATGGAGGCAAAATTCAAGTCGTTCTTTAATGACTTTGGCTCCGTGGAAGCAAATTTTAAGACGTGTTCTGCAACCTGCCATAAGAAATGCGCTGATGCTGCATGTCGTAATAAGTGTGACGCAGATTGCGGCAAAAAGGAAGTTGAAAATAAATTTAAGATCAAGATACCCCATTGA MAKKMMAVVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSATCHKKCADAACRNKCDADCGKKEVENKFKIKIPH Homology
BLAST of Cp4.1LG19g01130 vs. NCBI nr
Match: KAG6595588.1 (hypothetical protein SDJN03_12141, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 167 bits (424), Expect = 3.95e-52 Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Cp4.1LG19g01130 vs. NCBI nr
Match: KAG6595589.1 (hypothetical protein SDJN03_12142, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 167 bits (423), Expect = 5.62e-52 Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0
BLAST of Cp4.1LG19g01130 vs. NCBI nr
Match: KAG6595591.1 (hypothetical protein SDJN03_12144, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 166 bits (420), Expect = 1.61e-51 Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Cp4.1LG19g01130 vs. NCBI nr
Match: KAG6595592.1 (hypothetical protein SDJN03_12145, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 163 bits (412), Expect = 2.68e-50 Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of Cp4.1LG19g01130 vs. NCBI nr
Match: KAG6595590.1 (hypothetical protein SDJN03_12143, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 148 bits (373), Expect = 2.61e-44 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of Cp4.1LG19g01130 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.53e-11 Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 0
BLAST of Cp4.1LG19g01130 vs. ExPASy TrEMBL
Match: A0A5A7T8P0 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002620 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.24e-11 Identity = 40/91 (43.96%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of Cp4.1LG19g01130 vs. ExPASy TrEMBL
Match: A0A1S3CAJ3 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103498825 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.24e-11 Identity = 40/91 (43.96%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of Cp4.1LG19g01130 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.59e-11 Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Cp4.1LG19g01130 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.59e-11 Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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