Cp4.1LG19g00970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g00970
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ultraviolet-B receptor UVR8 isoform X1
Location	Cp4.1LG19: 685698 .. 693063 (-)
RNA-Seq Expression	Cp4.1LG19g00970
Synteny	Cp4.1LG19g00970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGACGTCGCGGTTTCTTGATCCTTCGGGCATTAACGCAATGTATGCAACTTCCCTGGGTTCTTCAGCTAATCTCTATCGAACTCTAGCTTCTGCTTCTAGCGGGGAAGACGTAGCACAATTCGTAGCCACCGATCGAAACCCATTTCTTAAATCCCACTATTTCTTCGAGTCTCAATCTATAATTCTCCAAATCCGCAACCAAAATCGATAAAAGTTCATGTCATTGCCTGGCAGTTCGTTTGATCTTTGAATTCGGAGTAAATTGCTCACAGAATTCGATAGAAGCAAAGCTATGCTTGTCAGAAGGCGTTTAGCGGAGCTGATAATCGGTTTCAATTCGGAAACTAGGAGGAGAAGAAGCCGATTGTTGTCGAGCAATTCTGGGAAGAGATTTGCAGCGGTTTGGGGAAATGGAGATTTCGGGAGGCTGGGGCTTGGAAATTTGGATTCTCAGTGGAGGCCTGTTGCGTGTTCTTCCTTTGATCGCGAAATGCTCAAGGATATTGCATGTGGTGGTGCTCACACTCTGTTCTTAACAGGTCTTAAACTTCTCTTCTTTCGAATTTTGCGGCTTATATGAGATTGTTTATGGGATTTGTAGTGTTTTGTATCTGTATCTATTTGAGGGACATTGTGTTACGTTTCGAGTCCCGCAGATGTTGAGAGCAATCTCCTATGTTTTGTTGGTGAAAATTGTGAAGATGTCAGCTGTGTTCGAGTAAAAGCTCACAAATTATCCCCCTACTTTGGCAGAATCTGGACGTGTTTATGCTACTGGTCTTAATAATTTTGGGCAGCTGGGAATCCTCGAGGAACAAGGCTACTGTACAGTATGTTTTCTCCCACTCGATCACCATTATCTATGTGTGATAGTTTTTAGTATCGATATTCTGCGCCTGAAGTAATGGTTGATCCTTAAGTTTTTGTTTTAGCTTTATCTTGTTGAACACAACTCTTTGTGAAAAACACTCGCCCTCTTTATTAACACCAATCGAGAAGAGATTACAAGACACTCTGTGCTCTTAATTGCTTGGGATGAAAACCTTGGTAGGTTGGAGGGGTATTTATAGTAGAGGCTCAACACTTTATTCCTAAAATATCTAACTATTTATTCCTAAAGCACCTTAATTCTTTTCCTAAAATAAGGAGTATCTTTATTTCTAAAATACCTAAATCATTTTCGTAAAATAGATAGACAATGAGTTCATACAATTATTGGGTTAATGATGATATTTTAACATATCTTTCCATCTTTCTTAATGTGGTCTTATGTTTCTGGGTTTTTCTTGTATTTTTAAAATTTTTCTTTTTGTAAAGACACGTTAATTATCACTTATCAGCATGGCGTCTCGGTGCAGGAGCCTGTTGAAGTTAGAATTCAGAAAGAAGCTGTTCATATCGCAGCTGGTTATAATCACTCTTGTGTTGTTACAGGTTTGCTCTACATTCCACTTGATTCGAGCGAAGACTAGCCTTGAACTATTAAACTTAATTCAGAAGTAATTTGTAATGGTTAACAACTTGTTGAAGATAGGACACAAATGAATTAACTTTATTGAATGGGAAGAGTTGTCCTAGTTAGCTCTTTGTTGGATAGGGCACAAAAGATAGGACAAAAATGAATTAAGTTTTGGTCCTAATATGATCTCAATTGGTTATTAGATGTGATTGCACATTTCATAAGGTTCATATTGCATCCGTTCCAATAGCATAGTTGGATCTTATGGCTCGATTCTTCTAGGGCTATTTTGAGGAAAGTCAACTCTATAGGATCAGAAGAATTTTGGAAGAGGTTGATAGATAGATGTTCGGGAAATATTTTGGACATCGTGGGTTTTGTCTCCCTGGTCTTTTTTCAATAAGAACTTTTGTAATTATAATTTTTCCACCATTTATCTAAACCGAAGCGATATTTTTGTATTCCTATGATATATATTTTAAATTGTTGTCTTTTGTATATTTCTTTGGAAGTTCAAATGTCATACCAAATTTAAAGAATTACTGTTACATTAAGTTCTTCAAAACGTTCTTTGATATCCTTCGGATAAAAGCATCTAGGTAAAGTATTATTATACAACATGCACTAAAAATCGACTGGCATCTCTCTGGGCAATAATCTTATGCGAGCAACTCATTCTTCATATAATTTAACTGCTTCTGGAAATTTCGAATACTATTAATTAACTTTCTGATGTATTACTCAAAAAGGAATTATACAATAACTCTTCTACTCTAGCTTCATTTGTTGACTTTATATTTTACTTCTTTATAGCTGATGGAGAACTGTATATGTGGGGGATGAATTCAAGTGGGCAGCTTGGTCTTGGAAAGAGTAAGCACTAGTTTCTGAAAATATTTTTCTTACACTGTATATGTGGGGGATGAATTCATATGCAAATTAATGTTTCTGTAGGACAGGTTGTTAGACAATGGAAAATGAAAGAATGAAATAGCCTAATCTTCTTAGTTTTTCTTTTTCGTTAATGGGTTAGGGTGGGGTTGTGAATTTATTCGGTACAACGTGGTTGTTCCCTTTGTAAGTCATAATGTTATTTGTTTTTAGTAGATAATCATGAATATTAGTTGTCAATCTATAACCAGTCGATAATTATGTTATCATTGTTTTGCAATTCTATTTATTTGTTGTGGTTGTCCCCCTTGAGGTGGACCTTGTACTTCTTTCCTTGTTTGAAAGAGAAGATAGTGATAGACCCCTATTGCGAAGCTTTATTGTCGTTATGTGTTGGTAACTCCGAAAACAAAGCATGTTGACTAGGAGATATTTTAGAGGGACTCAAGGAACCTAGTTACTAGTAACTTCTAAAACAAAGCATATTGACTTGGAGAAGGTCATCTTATAGCTCAAAATCCAATTATATGTCATAAGGAAAGGTATTTTAGTCGATGAATATTTCATACAGGAAATGACTGATGCAGGTGTAATATGTATTATTTATCTTTTGACTTTAGATTAAAATGCCGATTGCTTAACTATAGTACTTTCGAAAGGGTTGTTTTCCATTTTTTTTGGTCATTATAATTACGATTATTAGTTGTCTATCTTTATGTCTCTATGGTTATGCTACAACGCTGCGCTAGTAATTTTCTTTGCTAATTTTTAGTTAGTCTTTCATGACAGGAATAGATAAAATACTAATTTTCTCCCTCTCAAACTCGGTTGTACTGTTATACAGGGTCAGCAAAATCCGTATGCCTACCTACTAAAGTAAATAGCTTAGATGGGATTGTGATTAGGAGGGCTGCTTTAGGTTCAGACCACTCGATGGCTGTTACTGGTATAAATATCCTACCACATTTCAGTTTAGTAGTTTTACCGTTTTCATGGCGTTTCAGGAATTTGTGATATTATATTTTTCACCAGATGGAGGTGAAGTCTTAAGTTGGGGAGATGGACGATCGGGAAGATTGGGTCATGGCCACGAGTCATCATTATTGGGGTTTTTAAAAAGCACCAGGTACTGTTAGATTCATACTGATCTGTGATCCCTTCTTCCTTTCTCATTTCCCCTACAGAAAAATAAAAGAAGAATAAATTGACATTTGACCAAACATTTTTTGAGCATATAGGTGTATAAACTTATCGACTTTGAATTTTCTCATCTAGATTCATGATGCATCATACCATTCTTTGTTTCTTGTGTTCTTATGACATGTATATTTTTTTGTAGCGAATATACGCCCAGGCTAATTAAAGAACTTGAGGGGATTAAGGTAATCTTTCCATAGTGAGCTTTCATTCATCACCTTTAGGTTGCCAATTTTTTTAAAACTTTTTTTTTTCAGGTTGAACGGATTGCTGCAGGGATGCTGCACTCAGCGTGTGTAGATGGTTGTTTTTTTTTTTTCTAATTTTTTTTATGGCAAATGTCTGTTTCATTGTTGCTTCTTTTGGCACATTGTTGTTTTGCTAATGTTGAACAAATTTAGCAGAGAATGGAGCTGTTTTCATATTTGGTGAGAGAGCAACAAACAGAGTGGCAAGTTCCAATTCAATGTTGAAATTGATTTTATGTTTGTCTAGTAAAGCTACATTTTGCTTGATGTTCTTGCATTTAAATTATTAATGGTATGATACAGAGCTTTGGTGAGGCGAACAAGGAAACAACACCATCAATGATCAGCACGCTTTTGAACTGCGAAGAAGTTTCCTGTGGTGGTTATCACACGTGTGTCCTAACAAGTAACTTTATCCTTTTTTATTATTTCGAGAGTTGTAATCATTCCTGCCATTGATGTGTAACTTCAGATTTTTTTCTTTTATCTGAGCAAATTATATATTAAAATTGTTCTTAGCCAGTAAGCAATTATATATAAAGGTCGTCATAAATGAGTTAGTATAGTTTGTCTGATATCTTTGCTGTATTTTTCTATGGTTTCATTATGACAACAATAAAGCAAAGTAGCCAGTGTTCTTAGTATGTACATGTTATGTGACAGCCGTGTGCATACAGAACGTTCTAATTTTCACAATGGGGTGCTCATCCTCGGTTCTAATGATGGATGACTATATGATTTCTAAGTCAAGACATGTAGTACTTGAGATTCTGAACATGGCCTCATCTTTGACCTTTTTGTTTCTTGTTGTAGAAGGTGGGGACCTGTACAGTTGGGGTTCGAATGAGAATGGCTGTCTCGGGAATGGGTATGCCTCGCTGCAATAATATTCTGTAGTTTGGACCTCTTTTCTAATTTTGATGGCTCGCCGACTAAAATATTGTGTTCGTGATATCTGGTTATATTCAGGTCCACGAGTGTCTTTCATCTCCCCGAAAAAGTCGAAGGTCCCTTTTCAAAATCTCCCGTAAGCAAGGTTGGAGTTTTATGGTCTTCCATCAGAATTACTTGAATGATTTTATCATTTGTTTTCCTTGTGGAGACAACTTTAATTTTATCTAGTTTGAAAACCACCTCGTAATTTCTTTCTACCTATATTTTTTATTGTCTGAAAAGGGCAAAATAAATCATATGTGTGGTAAGGACAAAATGCCAAAAGAAAATGAATGATAATTCTGACGTGTTTGATATTTTTTATATTCATCCTGTTCAATATATTTAACAATCACATTTCACAGGTATCTTGTGGATGGAAACATACAGCAGCAATCTCAGGTAATAATATTTCAGCGGTCACCAAAGAAAACTATTTTGTATTTTCCTTGCAATATTAAAGGTAAAATTTGTTAAGTTTGTTGTTGAATCAGGTGGTGCCATTTTCACGTGGGGCTGGGGAGGTTCCCACGGAACGTTTTCGGTGGATGGCCATTCGTCTGGGGGTCAGCTGGTATGCTTCTCTTGCATTTATTTTCTTGTTATCTATGCTGCTCAATTGGATTTACTGCTGGATTTGTTTAGAGTTGGTCGACATTTAATGTGTATGCTTGAAATCTACGGTTTTGTTAGACAATCTACTGCCGTTGGAGATGGTTTCATTTGAAAATACTAATTGTTAGACGAACACGACTCTCTACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGAGCTTCCCCAAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCATTCTCTAAATTAGCCGATGTGGGACTTCCATCATCCAACACCTCCCCTCGAACAAAGTGCGCCTCCCCTTAATCGAGGCTTGACTCCTTTGGAGTCGTAGTCATTTTTTGACTGCCTTCGAGGAGGGGCTTGGCTCCTTTTCTTTTTGAGTTCTTTGTTCGATATTTGTACCAATCTATTGGCACGACTAAGTTTAGGGCATGGCCCTGATACCATGTTAGACGAACACGACTCTCCACAATGGTACGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACACTTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGGGACTTCCATCATCCAACACTAATGACAGGCACATGGTTCAGTGGCATTGGATCTCTGCCCTGAACCTACTTATTCTTTATATGATCAAACGATCACTTCTCTCATTGATTAGTTCAAGTACAAAGAAATTATTTACTGAAGGTTTCGAGTTTTAACTGTGTTCTTATACCTCTAGCCCATGTTATATGTTTCAATCTTGTGGAAACGTCCATTTGATAGCTATTTTTGTCTTCAGTTTTCAGTTGGTATAGAATAGATTTGTGTAGCTCTCCATTTTGTTCTTTATTTGGGTGTTTTTCTCGTTAAGAAAAGGAACTATTTGCTTTTTTATATCAAATTCTGTGACCACCCAAGCCTACAGCTAGCCGATATTGTCCTTTTTGGGTTTTTCCTTTCGGGTTTCCCCTCAAGGTTTTTAAAATGCATCTGCTAGGGAGAAGTATCCACTCCCTTATAAAGAATGTTTCATTCTCCTCCCCAACTGATGTGATTTCACAATCTACCCTCCTTCGGGGCCCAGCATCTTCGTTGGCACTCGTTCCCTTGTCCAATCGATGTGGGACACCCCAATCCACCCCCTTCAAGGCCCAGCGTCTTTGCTGGCACACCGCCTTGTGTCCACCCCCCTTCAGAGCTCAGCCTCCTCGCTGGCATATTGCTTGGTCTCTAGCTCTGATACCATTTGTAACAGTCCAAGCTCACTGCTAGTAAATATTGTCCTTTTTGGGTTTTTCCTTTTGAATTTTCCCTCAAAGTTTTTAAAACGTGTCTGCTAGAGAGAGGTTTCCACACCCTTATAAAGAATGTTTCATTCTCCTTCTCAATCGATGTTGGATCTCACAAATTCTAAATTCAAGATTTCAGCCACCTACAATATTTGGTCCGATACAACATTTAGGACAATCTTGAATGGTTTATACCCATAAAGGATTTGGTTTAATTATAGGGACATGGAAGCGACATTGACTATGTGAAACCGACAATGATCGACCTCGGAGAGAATGTGAAGGCAGTACAAGTCTCCTGTGGGTTCAACCACACTGGTGCGATACTCGAGTACATGTGAGAGTTTCAAACTTTAACCACACCAGTACAATAGTAAAGAGGCTGTGTTCATAATTTTCGAGTCGAAATTATAATATGTTCGTTCATGTATAAATACATCATTTCCTGTTAAGGCAAATAAAACTGTAAACTCTGTATATGTCATGCTTCGGGTGTCAGAGAAATAATCATAAACATGGGAGAATGATACCCAAATCTTAGGACATTTATTCAAACATTCAATTTGGCATTGTTCTTTGCAGCTCAAGTTCATAATGTTCGTCACATATTCTCTCATTTACTTGACATTTAAGCATTATGTTCTATTTATTTTCTGAGTTT

mRNA sequence

CAGACGTCGCGGTTTCTTGATCCTTCGGGCATTAACGCAATGTATGCAACTTCCCTGGGTTCTTCAGCTAATCTCTATCGAACTCTAGCTTCTGCTTCTAGCGGGGAAGACGTAGCACAATTCGTAGCCACCGATCGAAACCCATTTCTTAAATCCCACTATTTCTTCGAGTCTCAATCTATAATTCTCCAAATCCGCAACCAAAATCGATAAAAGTTCATGTCATTGCCTGGCAGTTCGTTTGATCTTTGAATTCGGAGTAAATTGCTCACAGAATTCGATAGAAGCAAAGCTATGCTTGTCAGAAGGCGTTTAGCGGAGCTGATAATCGGTTTCAATTCGGAAACTAGGAGGAGAAGAAGCCGATTGTTGTCGAGCAATTCTGGGAAGAGATTTGCAGCGGTTTGGGGAAATGGAGATTTCGGGAGGCTGGGGCTTGGAAATTTGGATTCTCAGTGGAGGCCTGTTGCGTGTTCTTCCTTTGATCGCGAAATGCTCAAGGATATTGCATGTGGTGGTGCTCACACTCTGTTCTTAACAGAATCTGGACGTGTTTATGCTACTGGTCTTAATAATTTTGGGCAGCTGGGAATCCTCGAGGAACAAGGCTACTGTACACATGGCGTCTCGGTGCAGGAGCCTGTTGAAGTTAGAATTCAGAAAGAAGCTGTTCATATCGCAGCTGGTTATAATCACTCTTGTGTTGTTACAGCTGATGGAGAACTGTATATGTGGGGGATGAATTCAAGTGGGCAGCTTGGTCTTGGAAAGAGGTCAGCAAAATCCGTATGCCTACCTACTAAAGTAAATAGCTTAGATGGGATTGTGATTAGGAGGGCTGCTTTAGGTTCAGACCACTCGATGGCTGTTACTGATGGAGGTGAAGTCTTAAGTTGGGGAGATGGACGATCGGGAAGATTGGGTCATGGCCACGAGTCATCATTATTGGGGTTTTTAAAAAGCACCAGCGAATATACGCCCAGGCTAATTAAAGAACTTGAGGGGATTAAGAGCTTTGGTGAGGCGAACAAGGAAACAACACCATCAATGATCAGCACGCTTTTGAACTGCGAAGAAGTTTCCTGTGGTGGTTATCACACGTGTGTCCTAACAAAAGGTGGGGACCTGTACAGTTGGGGTTCGAATGAGAATGGCTGTCTCGGGAATGGGTCCACGAGTGTCTTTCATCTCCCCGAAAAAGTCGAAGGTCCCTTTTCAAAATCTCCCGTATCTTGTGGATGGAAACATACAGCAGCAATCTCAGGTGGTGCCATTTTCACGTGGGGCTGGGGAGGTTCCCACGGAACGTTTTCGGTGGATGGCCATTCGTCTGGGGGTCAGCTGGGACATGGAAGCGACATTGACTATGTGAAACCGACAATGATCGACCTCGGAGAGAATGTGAAGGCAGTACAAGTCTCCTGTGGGTTCAACCACACTGGTGCGATACTCGAGTACATGTGAGAGTTTCAAACTTTAACCACACCAGTACAATAGTAAAGAGGCTGTGTTCATAATTTTCGAGTCGAAATTATAATATGTTCGTTCATGTATAAATACATCATTTCCTGTTAAGGCAAATAAAACTGTAAACTCTGTATATGTCATGCTTCGGGTGTCAGAGAAATAATCATAAACATGGGAGAATGATACCCAAATCTTAGGACATTTATTCAAACATTCAATTTGGCATTGTTCTTTGCAGCTCAAGTTCATAATGTTCGTCACATATTCTCTCATTTACTTGACATTTAAGCATTATGTTCTATTTATTTTCTGAGTTT

Coding sequence (CDS)

ATGCTTGTCAGAAGGCGTTTAGCGGAGCTGATAATCGGTTTCAATTCGGAAACTAGGAGGAGAAGAAGCCGATTGTTGTCGAGCAATTCTGGGAAGAGATTTGCAGCGGTTTGGGGAAATGGAGATTTCGGGAGGCTGGGGCTTGGAAATTTGGATTCTCAGTGGAGGCCTGTTGCGTGTTCTTCCTTTGATCGCGAAATGCTCAAGGATATTGCATGTGGTGGTGCTCACACTCTGTTCTTAACAGAATCTGGACGTGTTTATGCTACTGGTCTTAATAATTTTGGGCAGCTGGGAATCCTCGAGGAACAAGGCTACTGTACACATGGCGTCTCGGTGCAGGAGCCTGTTGAAGTTAGAATTCAGAAAGAAGCTGTTCATATCGCAGCTGGTTATAATCACTCTTGTGTTGTTACAGCTGATGGAGAACTGTATATGTGGGGGATGAATTCAAGTGGGCAGCTTGGTCTTGGAAAGAGGTCAGCAAAATCCGTATGCCTACCTACTAAAGTAAATAGCTTAGATGGGATTGTGATTAGGAGGGCTGCTTTAGGTTCAGACCACTCGATGGCTGTTACTGATGGAGGTGAAGTCTTAAGTTGGGGAGATGGACGATCGGGAAGATTGGGTCATGGCCACGAGTCATCATTATTGGGGTTTTTAAAAAGCACCAGCGAATATACGCCCAGGCTAATTAAAGAACTTGAGGGGATTAAGAGCTTTGGTGAGGCGAACAAGGAAACAACACCATCAATGATCAGCACGCTTTTGAACTGCGAAGAAGTTTCCTGTGGTGGTTATCACACGTGTGTCCTAACAAAAGGTGGGGACCTGTACAGTTGGGGTTCGAATGAGAATGGCTGTCTCGGGAATGGGTCCACGAGTGTCTTTCATCTCCCCGAAAAAGTCGAAGGTCCCTTTTCAAAATCTCCCGTATCTTGTGGATGGAAACATACAGCAGCAATCTCAGGTGGTGCCATTTTCACGTGGGGCTGGGGAGGTTCCCACGGAACGTTTTCGGTGGATGGCCATTCGTCTGGGGGTCAGCTGGGACATGGAAGCGACATTGACTATGTGAAACCGACAATGATCGACCTCGGAGAGAATGTGAAGGCAGTACAAGTCTCCTGTGGGTTCAACCACACTGGTGCGATACTCGAGTACATGTGA

Protein sequence

MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVACSSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVRIQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIKSFGEANKETTPSMISTLLNCEEVSCGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVSCGWKHTAAISGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYM

Homology

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BLAST of Cp4.1LG19g00970 vs. ExPASy Swiss-Prot
Match: Q9FN03 (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.8e-43
Identity = 112/361 (31.02%), Postives = 173/361 (47.92%), Query Frame = 0


Query: 38  WGNGDFGRLGLGNLDSQWRPVACSSFDREMLKDIACGGAHTLFLTESG-RVYATGLNNFG 97
           WG G+ G+LG G+ + +  P   S+ D   +  + CG  HT+  ++SG  VY+ G  +FG
Sbjct: 39  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98

Query: 98  QLGILEEQGYCT-------HGVSVQEPVEVRIQKEAVHIAAGYNHSCVVTADGELYMWGM 157
           +LG        T       HG+ +++            IA G +H   VT +GE+  WG 
Sbjct: 99  RLGHGNSSDLFTPLPIKALHGIRIKQ------------IACGDSHCLAVTMEGEVQSWGR 158

Query: 158 NSSGQLGLGKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTDGGEVLSWGDGRSGRL 217
           N +GQLGLG    +   +P K+ + +GI I+  A G++H+ AVT+ G++  WG GR G L
Sbjct: 159 NQNGQLGLG--DTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNL 218

Query: 218 GHGHESSLLGFLKSTSEYTPRLIKELEGIKSFGEANKETTPSMISTLLNCEEVSCGGYHT 277
           G G           T    P  +    G K                      V+CG  HT
Sbjct: 219 GLGDR---------TDRLVPERVTSTGGEK-------------------MSMVACGWRHT 278

Query: 278 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSK--SPVSCGWKHTAAI-SGGA 337
             ++  G LY++G ++ G LG+G      +P K+E   +   S +S GW+HT A+ S G 
Sbjct: 279 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 338

Query: 338 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 388
           ++ WGW            +  GQ+G G+++D   P  +   ++ K VQVSCG+ HT A+ 
Sbjct: 339 LYGWGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVT 345

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BLAST of Cp4.1LG19g00970 vs. ExPASy Swiss-Prot
Match: Q6PAV2 (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 4.9e-40
Identity = 118/356 (33.15%), Postives = 174/356 (48.88%), Query Frame = 0


Query: 38  WGNGDFGRLGLGNLDSQ--WRPVACSSFDREMLKDIACGGAHTLFLTESGRVYATGLNNF 97
           WGN  +G+LGLG +D +    P     F  + ++D+ CG  HT+F+ + G VY  G N+ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 98  GQLGILEEQGYCTHGVSVQEPVEVRI--QKEAVHIAAGYNHSCVVTADGELYMWGMNSSG 157
           GQLG         H  S ++P +V     +  V +A G  H+  +   G++Y WG++S G
Sbjct: 64  GQLG---------HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 123

Query: 158 QLGLGKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGH 217
           QLGL + S + + +P  + SL  I I + A G  HS+A++   EV  WG  + G+LG G 
Sbjct: 124 QLGL-QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 183

Query: 218 ESSLLGFLKSTSEYTPRLIKELEGIKSFGEANKETTPSMISTLLNCEEVSCGGYHTCVLT 277
           +       K TS   P+LIK L GI           P M        +V+ GG H+ VLT
Sbjct: 184 DCQ-----KQTS---PQLIKSLLGI-----------PFM--------QVAAGGAHSFVLT 243

Query: 278 KGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPV--SCGWKHTAAIS-GGAIFTW 337
             G ++ WG N+ G LG    +  ++P  ++   S+  V   CG  HTAA++  G +FT+
Sbjct: 244 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 303

Query: 338 GWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 387
           G GG             GQLGH S    + P  +         QV+CG  HT A +
Sbjct: 304 GAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310

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BLAST of Cp4.1LG19g00970 vs. ExPASy Swiss-Prot
Match: Q5PQN1 (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus OX=10116 GN=Herc4 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.5e-40
Identity = 117/356 (32.87%), Postives = 174/356 (48.88%), Query Frame = 0


Query: 38  WGNGDFGRLGLGNLDSQ--WRPVACSSFDREMLKDIACGGAHTLFLTESGRVYATGLNNF 97
           WGN  +G+LGLG +D +    P     F  + ++D+ CG  HT+F+ + G VY  G N+ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 98  GQLGILEEQGYCTHGVSVQEPVEVRI--QKEAVHIAAGYNHSCVVTADGELYMWGMNSSG 157
           GQLG         H  S ++P +V     +  V ++ G  H+  +   G++Y WG++S G
Sbjct: 64  GQLG---------HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 123

Query: 158 QLGLGKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGH 217
           QLGL + S + + +P  + SL  I I + A G  HS+A++   EV  WG  + G+LG G 
Sbjct: 124 QLGL-QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 183

Query: 218 ESSLLGFLKSTSEYTPRLIKELEGIKSFGEANKETTPSMISTLLNCEEVSCGGYHTCVLT 277
           E       K TS   P+LIK L GI           P M        +V+ GG H+ VLT
Sbjct: 184 ECQ-----KQTS---PQLIKSLLGI-----------PFM--------QVAAGGAHSFVLT 243

Query: 278 KGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPV--SCGWKHTAAIS-GGAIFTW 337
             G ++ WG N+ G LG    +  ++P  ++   S+  V   CG  HTAA++  G +FT+
Sbjct: 244 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 303

Query: 338 GWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 387
           G GG             GQLGH S    + P  +         Q++CG  HT A +
Sbjct: 304 GAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310

[Close]

BLAST of Cp4.1LG19g00970 vs. ExPASy Swiss-Prot
Match: Q5GLZ8 (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens OX=9606 GN=HERC4 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.2e-39
Identity = 115/356 (32.30%), Postives = 173/356 (48.60%), Query Frame = 0


Query: 38  WGNGDFGRLGLGNLDSQ--WRPVACSSFDREMLKDIACGGAHTLFLTESGRVYATGLNNF 97
           WGN  FG+LGLG +D +    P     F  + ++D+ CG  HT+F+ + G VY  G N+ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 98  GQLGILEEQGYCTHGVSVQEPVEVRI--QKEAVHIAAGYNHSCVVTADGELYMWGMNSSG 157
           GQLG         H  S ++P +V     +  V ++ G  H+  +   G++Y WG++S G
Sbjct: 64  GQLG---------HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 123

Query: 158 QLGLGKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGH 217
           QLGL   S + + +P  + SL  I I + A G  HS+A++   EV  WG  + G+LG G 
Sbjct: 124 QLGL-VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGT 183

Query: 218 ESSLLGFLKSTSEYTPRLIKELEGIKSFGEANKETTPSMISTLLNCEEVSCGGYHTCVLT 277
           +       K TS   P+L+K L GI           P M        +V+ GG H+ VLT
Sbjct: 184 DCK-----KQTS---PQLLKSLLGI-----------PFM--------QVAAGGAHSFVLT 243

Query: 278 KGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPV--SCGWKHTAAIS-GGAIFTW 337
             G ++ WG N+ G LG    +  ++P  ++   S+  V   CG  HTAA++  G +FT+
Sbjct: 244 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTF 303

Query: 338 GWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 387
           G GG             GQLGH S    + P  +         +++CG  HT A +
Sbjct: 304 GAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310

[Close]

BLAST of Cp4.1LG19g00970 vs. ExPASy Swiss-Prot
Match: Q15034 (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens OX=9606 GN=HERC3 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.8e-35
Identity = 109/354 (30.79%), Postives = 163/354 (46.05%), Query Frame = 0


Query: 38  WGNGDFGRLGLG-NLDS-QWRPVACSSFDREMLKDIACGGAHTLFLTESGRVYATGLNNF 97
           WG    G+ G+  NL      P  C       +K++ACGG H++FL E G VY  GLN  
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 98  GQLGILEEQGYCTHGVSVQEPVEVRIQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQL 157
           GQLG  E +G      +  E +     +  +H+A G +HS  ++  G+L+ WG  S GQL
Sbjct: 64  GQLG-HEREG------NKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 123

Query: 158 GLGKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHES 217
           GL   +  SV +P  +  L+   I + + G+ H +A+   G+  +WG    G+LG G E 
Sbjct: 124 GL-MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE- 183

Query: 218 SLLGFLKSTSEYTPRLIKELEGIKSFGEANKETTPSMISTLLNCEEVSCGGYHTCVLTKG 277
                    S+ +P+ ++ LEGI                      +V+ GG H+  L+  
Sbjct: 184 -------FPSQASPQRVRSLEGIP-------------------LAQVAAGGAHSFALSLS 243

Query: 278 GDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPV--SCGWKHTAAIS-GGAIFTWGW 337
           G ++ WG N  G LG         P  V+   ++  V  SCG +HTA ++  G +FT+G 
Sbjct: 244 GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 303

Query: 338 GGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 387
           G            S GQLGH S  D V P  +      +  Q++CG  HT A +
Sbjct: 304 G------------SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310

[Close]

BLAST of Cp4.1LG19g00970 vs. NCBI nr
Match: XP_023518662.1 (ultraviolet-B receptor UVR8 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 750 bits (1937), Expect = 2.27e-272
Identity = 383/423 (90.54%), Postives = 383/423 (90.54%), Query Frame = 0


Query: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60
           MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC
Sbjct: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60

Query: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR 120
           SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT      EPVEVR
Sbjct: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT------EPVEVR 120

Query: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180
           IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR
Sbjct: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180

Query: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK- 240
           RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK 
Sbjct: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIKV 240

Query: 241 ------------------------------SFGEANKETTPSMISTLLNCEEVSCGGYHT 300
                                         SFGEANKETTPSMISTLLNCEEVSCGGYHT
Sbjct: 241 ERIAAGMLHSACVDENGAVFIFGERATNRVSFGEANKETTPSMISTLLNCEEVSCGGYHT 300

Query: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS---CGWKHTAAISGGA 360
           CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS   CGWKHTAAISGGA
Sbjct: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVSKVSCGWKHTAAISGGA 360

Query: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 389
           IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL
Sbjct: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 417

[Close]

BLAST of Cp4.1LG19g00970 vs. NCBI nr
Match: XP_022966331.1 (ultraviolet-B receptor UVR8 isoform X1 [Cucurbita maxima])

HSP 1 Score: 744 bits (1921), Expect = 6.23e-270
Identity = 379/423 (89.60%), Postives = 381/423 (90.07%), Query Frame = 0


Query: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60
           ML RRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC
Sbjct: 1   MLARRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60

Query: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR 120
           SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT      EPVEVR
Sbjct: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT------EPVEVR 120

Query: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180
           IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR
Sbjct: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180

Query: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK- 240
           RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK 
Sbjct: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIKV 240

Query: 241 ------------------------------SFGEANKETTPSMISTLLNCEEVSCGGYHT 300
                                         SFGEANK TTPSMISTLL+CEEVSCGGYHT
Sbjct: 241 KRIAAGMLHSACVDENGAVFIFGERATNRLSFGEANKATTPSMISTLLDCEEVSCGGYHT 300

Query: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS---CGWKHTAAISGGA 360
           CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS   CGWKHTAAISGGA
Sbjct: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVSKVSCGWKHTAAISGGA 360

Query: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 389
           IFTWGWGGSHGTFSVDGHSSGGQLGHGSD+DYVKPTMIDLGENVKAVQVSCGFNHTGAIL
Sbjct: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 417

[Close]

BLAST of Cp4.1LG19g00970 vs. NCBI nr
Match: XP_023518663.1 (ultraviolet-B receptor UVR8 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 742 bits (1915), Expect = 4.92e-269
Identity = 381/423 (90.07%), Postives = 381/423 (90.07%), Query Frame = 0


Query: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60
           MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC
Sbjct: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60

Query: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR 120
           SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT      EPVEVR
Sbjct: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT------EPVEVR 120

Query: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180
           IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR
Sbjct: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180

Query: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK- 240
           RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK 
Sbjct: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIKV 240

Query: 241 ------------------------------SFGEANKETTPSMISTLLNCEEVSCGGYHT 300
                                         SFGEANKETTPSMISTLLNCEEVSCGGYHT
Sbjct: 241 ERIAAGMLHSACVDENGAVFIFGERATNRVSFGEANKETTPSMISTLLNCEEVSCGGYHT 300

Query: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS---CGWKHTAAISGGA 360
           CVLT G DLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS   CGWKHTAAISGGA
Sbjct: 301 CVLTSG-DLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVSKVSCGWKHTAAISGGA 360

Query: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 389
           IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL
Sbjct: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 416

[Close]

BLAST of Cp4.1LG19g00970 vs. NCBI nr
Match: XP_022925248.1 (ultraviolet-B receptor UVR8 isoform X3 [Cucurbita moschata])

HSP 1 Score: 742 bits (1915), Expect = 5.11e-269
Identity = 377/423 (89.13%), Postives = 381/423 (90.07%), Query Frame = 0


Query: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60
           ML RRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC
Sbjct: 1   MLARRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60

Query: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR 120
           SSFDRE+LKDIACGGAHTLFLTESGRVYATGLNN GQLGILEEQGYCT      EPVEVR
Sbjct: 61  SSFDREILKDIACGGAHTLFLTESGRVYATGLNNLGQLGILEEQGYCT------EPVEVR 120

Query: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180
           IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR
Sbjct: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180

Query: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK- 240
           RAALGSDHSMAVTDGG+VLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK 
Sbjct: 181 RAALGSDHSMAVTDGGKVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIKV 240

Query: 241 ------------------------------SFGEANKETTPSMISTLLNCEEVSCGGYHT 300
                                         SFG+ANKETTPSMISTLLNCEEVSCGGYHT
Sbjct: 241 KRIAAGMLHSACVDENGAVFIFGERATNRVSFGDANKETTPSMISTLLNCEEVSCGGYHT 300

Query: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS---CGWKHTAAISGGA 360
           CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS   CGWKHTAAISGGA
Sbjct: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVSKVSCGWKHTAAISGGA 360

Query: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 389
           IFTWGWGGSHGTFSVDGHSSGGQLGHGSD+DYVKPTMIDLGENVKAVQVSCGFNHTGAIL
Sbjct: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 417

[Close]

BLAST of Cp4.1LG19g00970 vs. NCBI nr
Match: KAG6595621.1 (putative E3 ubiquitin-protein ligase HERC4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 739 bits (1907), Expect = 8.46e-268
Identity = 376/423 (88.89%), Postives = 378/423 (89.36%), Query Frame = 0


Query: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60
           ML RRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPV C
Sbjct: 1   MLARRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVGC 60

Query: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR 120
           SSFDRE+LKDIACGGAHTLFLTESGRVYATGLNN GQLGILEEQGYCT      EP EVR
Sbjct: 61  SSFDREILKDIACGGAHTLFLTESGRVYATGLNNLGQLGILEEQGYCT------EPAEVR 120

Query: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180
           IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR
Sbjct: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180

Query: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK- 240
           RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHE SLLGFLKSTSEYTPRLIKELEGIK 
Sbjct: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHEPSLLGFLKSTSEYTPRLIKELEGIKV 240

Query: 241 ------------------------------SFGEANKETTPSMISTLLNCEEVSCGGYHT 300
                                         SFG+ANKETTPSMISTLLNCEEVSCGGYHT
Sbjct: 241 KRIAAGMLHSACVDENGAVFIFGERATNRVSFGDANKETTPSMISTLLNCEEVSCGGYHT 300

Query: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS---CGWKHTAAISGGA 360
           CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS   CGWKHTAAISGGA
Sbjct: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVSKVSCGWKHTAAISGGA 360

Query: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 389
           IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL
Sbjct: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 417

[Close]

BLAST of Cp4.1LG19g00970 vs. ExPASy TrEMBL
Match: A0A6J1HP08 (ultraviolet-B receptor UVR8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466019 PE=4 SV=1)

HSP 1 Score: 744 bits (1921), Expect = 3.01e-270
Identity = 379/423 (89.60%), Postives = 381/423 (90.07%), Query Frame = 0


Query: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60
           ML RRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC
Sbjct: 1   MLARRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60

Query: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR 120
           SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT      EPVEVR
Sbjct: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT------EPVEVR 120

Query: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180
           IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR
Sbjct: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180

Query: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK- 240
           RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK 
Sbjct: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIKV 240

Query: 241 ------------------------------SFGEANKETTPSMISTLLNCEEVSCGGYHT 300
                                         SFGEANK TTPSMISTLL+CEEVSCGGYHT
Sbjct: 241 KRIAAGMLHSACVDENGAVFIFGERATNRLSFGEANKATTPSMISTLLDCEEVSCGGYHT 300

Query: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS---CGWKHTAAISGGA 360
           CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS   CGWKHTAAISGGA
Sbjct: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVSKVSCGWKHTAAISGGA 360

Query: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 389
           IFTWGWGGSHGTFSVDGHSSGGQLGHGSD+DYVKPTMIDLGENVKAVQVSCGFNHTGAIL
Sbjct: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 417

[Close]

BLAST of Cp4.1LG19g00970 vs. ExPASy TrEMBL
Match: A0A6J1EEN4 (ultraviolet-B receptor UVR8 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432545 PE=4 SV=1)

HSP 1 Score: 742 bits (1915), Expect = 2.47e-269
Identity = 377/423 (89.13%), Postives = 381/423 (90.07%), Query Frame = 0


Query: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60
           ML RRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC
Sbjct: 1   MLARRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60

Query: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR 120
           SSFDRE+LKDIACGGAHTLFLTESGRVYATGLNN GQLGILEEQGYCT      EPVEVR
Sbjct: 61  SSFDREILKDIACGGAHTLFLTESGRVYATGLNNLGQLGILEEQGYCT------EPVEVR 120

Query: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180
           IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR
Sbjct: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180

Query: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK- 240
           RAALGSDHSMAVTDGG+VLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK 
Sbjct: 181 RAALGSDHSMAVTDGGKVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIKV 240

Query: 241 ------------------------------SFGEANKETTPSMISTLLNCEEVSCGGYHT 300
                                         SFG+ANKETTPSMISTLLNCEEVSCGGYHT
Sbjct: 241 KRIAAGMLHSACVDENGAVFIFGERATNRVSFGDANKETTPSMISTLLNCEEVSCGGYHT 300

Query: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS---CGWKHTAAISGGA 360
           CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS   CGWKHTAAISGGA
Sbjct: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVSKVSCGWKHTAAISGGA 360

Query: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 389
           IFTWGWGGSHGTFSVDGHSSGGQLGHGSD+DYVKPTMIDLGENVKAVQVSCGFNHTGAIL
Sbjct: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 417

[Close]

BLAST of Cp4.1LG19g00970 vs. ExPASy TrEMBL
Match: A0A6J1HMP4 (ultraviolet-B receptor UVR8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466019 PE=4 SV=1)

HSP 1 Score: 736 bits (1899), Expect = 6.53e-267
Identity = 377/423 (89.13%), Postives = 379/423 (89.60%), Query Frame = 0


Query: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60
           ML RRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC
Sbjct: 1   MLARRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60

Query: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR 120
           SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT      EPVEVR
Sbjct: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT------EPVEVR 120

Query: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180
           IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR
Sbjct: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180

Query: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK- 240
           RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK 
Sbjct: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIKV 240

Query: 241 ------------------------------SFGEANKETTPSMISTLLNCEEVSCGGYHT 300
                                         SFGEANK TTPSMISTLL+CEEVSCGGYHT
Sbjct: 241 KRIAAGMLHSACVDENGAVFIFGERATNRLSFGEANKATTPSMISTLLDCEEVSCGGYHT 300

Query: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS---CGWKHTAAISGGA 360
           CVLT G DLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS   CGWKHTAAISGGA
Sbjct: 301 CVLTSG-DLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVSKVSCGWKHTAAISGGA 360

Query: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 389
           IFTWGWGGSHGTFSVDGHSSGGQLGHGSD+DYVKPTMIDLGENVKAVQVSCGFNHTGAIL
Sbjct: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 416

[Close]

BLAST of Cp4.1LG19g00970 vs. ExPASy TrEMBL
Match: A0A6J1DMZ3 (ultraviolet-B receptor UVR8 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022061 PE=4 SV=1)

HSP 1 Score: 677 bits (1746), Expect = 1.38e-243
Identity = 342/422 (81.04%), Postives = 363/422 (86.02%), Query Frame = 0


Query: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60
           ML RRR AE IIGFNSET RRRSR LSSNSGKRFAAVWGNGDFGRLGLG LDSQWRPVAC
Sbjct: 1   MLSRRRFAEFIIGFNSETWRRRSRRLSSNSGKRFAAVWGNGDFGRLGLGTLDSQWRPVAC 60

Query: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR 120
           S+F+ E LKDIACGGAHTLFLTESGRVYATGLNNFGQLGI +++ Y T      EPVEV+
Sbjct: 61  SAFEHETLKDIACGGAHTLFLTESGRVYATGLNNFGQLGISDDKSYST------EPVEVK 120

Query: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180
           IQKEAVHI+AGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAK+V LPTKV+SLDGIVI+
Sbjct: 121 IQKEAVHISAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKAVHLPTKVDSLDGIVIK 180

Query: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK- 240
           RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHES+LLGFLKSTSEYTPRLIKEL+GIK 
Sbjct: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESTLLGFLKSTSEYTPRLIKELDGIKV 240

Query: 241 ------------------------------SFGEANKETTPSMISTLLNCEEVSCGGYHT 300
                                          F EANK T PS+ISTLLNCEEV+CGGYHT
Sbjct: 241 KQIAAGMLHSACVDENGAVFIFGERAMNRVGFDEANKATIPSIISTLLNCEEVACGGYHT 300

Query: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS---CGWKHTAAISGGA 360
           CVLTK GDLYSWGSNENGCLGNGST+VF LPE+VEGPFS+SPVS   CGWKHTAAISGGA
Sbjct: 301 CVLTKAGDLYSWGSNENGCLGNGSTNVFDLPERVEGPFSRSPVSKVSCGWKHTAAISGGA 360

Query: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 388
           IFTWGWGGSHGTFSVDGHSSGGQLGHGSD+DYVKP M+D+GENVK+VQVSCGFNHTGAIL
Sbjct: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPMMVDIGENVKSVQVSCGFNHTGAIL 416

[Close]

BLAST of Cp4.1LG19g00970 vs. ExPASy TrEMBL
Match: A0A6J1HRS2 (PH, RCC1 and FYVE domains-containing protein 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466019 PE=4 SV=1)

HSP 1 Score: 667 bits (1720), Expect = 6.69e-240
Identity = 346/423 (81.80%), Postives = 350/423 (82.74%), Query Frame = 0


Query: 1   MLVRRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60
           ML RRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC
Sbjct: 1   MLARRRLAELIIGFNSETRRRRSRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVAC 60

Query: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR 120
           SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT      EPVEVR
Sbjct: 61  SSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFGQLGILEEQGYCT------EPVEVR 120

Query: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIR 180
           IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKR    +     +         
Sbjct: 121 IQKEAVHIAAGYNHSCVVTADGELYMWGMNSSGQLGLGKRICDIIFFSMFIFFFS----- 180

Query: 181 RAALGSDHSMAVTDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK- 240
                        DGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK 
Sbjct: 181 ------------PDGGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIKV 240

Query: 241 ------------------------------SFGEANKETTPSMISTLLNCEEVSCGGYHT 300
                                         SFGEANK TTPSMISTLL+CEEVSCGGYHT
Sbjct: 241 KRIAAGMLHSACVDENGAVFIFGERATNRLSFGEANKATTPSMISTLLDCEEVSCGGYHT 300

Query: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS---CGWKHTAAISGGA 360
           CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVS   CGWKHTAAISGGA
Sbjct: 301 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPVSKVSCGWKHTAAISGGA 360

Query: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 389
           IFTWGWGGSHGTFSVDGHSSGGQLGHGSD+DYVKPTMIDLGENVKAVQVSCGFNHTGAIL
Sbjct: 361 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 400

[Close]

BLAST of Cp4.1LG19g00970 vs. TAIR 10
Match: AT5G08710.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 505.0 bits (1299), Expect = 5.4e-143
Identity = 246/401 (61.35%), Postives = 296/401 (73.82%), Query Frame = 0


Query: 23  SRLLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVACSSFDREMLKDIACGGAHTLFLT 82
           SR +SS SGKRFAA+WG+GD+GRLGLGNLDSQW P  CS+     +  +ACGGAHTLFLT
Sbjct: 39  SRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLT 98

Query: 83  ESGRVYATGLNNFGQLGILEEQGYCTHGVSVQEPVEVR-IQKEAVHIAAGYNHSCVVTAD 142
           E+ RV+ATGLN+ GQLG+ + + +        +P+EV  + K+ +HI+AGY HS  +T D
Sbjct: 99  ETRRVFATGLNDCGQLGVSDVKSH------AMDPLEVSGLDKDILHISAGYYHSAAITVD 158

Query: 143 GELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTDGGEVLSW 202
           GELYMWG NSSGQLGLGK++A+ V +PTKV +L GI I+  ALGS+HS+AVTDGGEVLSW
Sbjct: 159 GELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSW 218

Query: 203 GDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIK---------------------- 262
           G G SGRLGHGH+SSL G L+S SE+TPRLIKELEGIK                      
Sbjct: 219 GGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFM 278

Query: 263 ---------SFGEANKETTPSMISTLLNCEEVSCGGYHTCVLTKGGDLYSWGSNENGCLG 322
                     FG     TTPS+IS +   EEV+CGGYHTCV+T+GG+LY+WGSNENGCLG
Sbjct: 279 FGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLG 338

Query: 323 NGSTSVFHLPEKVEGPF---SKSPVSCGWKHTAAISGGAIFTWGWGGSHGTFSVDGHSSG 382
             ST V H P +VEGPF   + S VSCGWKHTAAIS   +FTWGWGGSHGTFSVDGHSSG
Sbjct: 339 TDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSG 398

Query: 383 GQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAILEY 389
           GQLGHGSD+DY +P M+DLG+NV+AV +SCGFNHT A+LE+
Sbjct: 399 GQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433

[Close]

BLAST of Cp4.1LG19g00970 vs. TAIR 10
Match: AT5G63860.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-44
Identity = 112/361 (31.02%), Postives = 173/361 (47.92%), Query Frame = 0


Query: 38  WGNGDFGRLGLGNLDSQWRPVACSSFDREMLKDIACGGAHTLFLTESG-RVYATGLNNFG 97
           WG G+ G+LG G+ + +  P   S+ D   +  + CG  HT+  ++SG  VY+ G  +FG
Sbjct: 39  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98

Query: 98  QLGILEEQGYCT-------HGVSVQEPVEVRIQKEAVHIAAGYNHSCVVTADGELYMWGM 157
           +LG        T       HG+ +++            IA G +H   VT +GE+  WG 
Sbjct: 99  RLGHGNSSDLFTPLPIKALHGIRIKQ------------IACGDSHCLAVTMEGEVQSWGR 158

Query: 158 NSSGQLGLGKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTDGGEVLSWGDGRSGRL 217
           N +GQLGLG    +   +P K+ + +GI I+  A G++H+ AVT+ G++  WG GR G L
Sbjct: 159 NQNGQLGLG--DTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNL 218

Query: 218 GHGHESSLLGFLKSTSEYTPRLIKELEGIKSFGEANKETTPSMISTLLNCEEVSCGGYHT 277
           G G           T    P  +    G K                      V+CG  HT
Sbjct: 219 GLGDR---------TDRLVPERVTSTGGEK-------------------MSMVACGWRHT 278

Query: 278 CVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSK--SPVSCGWKHTAAI-SGGA 337
             ++  G LY++G ++ G LG+G      +P K+E   +   S +S GW+HT A+ S G 
Sbjct: 279 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 338

Query: 338 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPTMIDLGENVKAVQVSCGFNHTGAIL 388
           ++ WGW            +  GQ+G G+++D   P  +   ++ K VQVSCG+ HT A+ 
Sbjct: 339 LYGWGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVT 345

[Close]

BLAST of Cp4.1LG19g00970 vs. TAIR 10
Match: AT1G69710.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain )

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-30
Identity = 114/383 (29.77%), Postives = 168/383 (43.86%), Query Frame = 0


Query: 25  LLSSNSGKRFAAVWGNGDFGRLGLGNLDSQWRPVACSSFDREMLKDIACGGAHTLFLTES 84
           +L +  G+ F+  WG G  G+LG G      +P   SS      K +ACG  HT  +T+S
Sbjct: 313 VLVTKQGEIFS--WGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQS 372

Query: 85  GRVYA--TGLNNFGQLGILEEQGYCTHGVSVQEPVEVRIQKEAVH---IAAGYNHSCVVT 144
           G +Y+   G +N   LG   E        S   P  V    + ++   +A G  H+ VV 
Sbjct: 373 GDLYSWGDGTHNVDLLGHGNES-------SCWIPKRVTGDLQGLYVSDVACGPWHTAVVA 432

Query: 145 ADGELYMWGMNSSGQLGLGKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTD----- 204
           + G+L+ +G  + G LG G R + SV  P +V SL G+++ + A G  H+ AV +     
Sbjct: 433 SSGQLFTFGDGTFGALGHGDRRSTSV--PREVESLIGLIVTKVACGVWHTAAVVEVTNEA 492

Query: 205 --------GGEVLSWGDGRSGRLGHGHESSLLGFLKSTSEYTPRLIKELEGIKSFGEANK 264
                    G+V +WGDG  G+LGHG   + L          P  +  L           
Sbjct: 493 SEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKL---------LPECVISL----------- 552

Query: 265 ETTPSMISTLLNCEEVSCGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGP 324
                   T  N  +V+CG   T   T  G +Y+ GS   G LGN  T+  + PE+VEG 
Sbjct: 553 --------TNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGN-PTAKGNFPERVEGD 612

Query: 325 F---SKSPVSCGWKHTAAI-SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDIDYVKPT 384
               S   ++CG  H A + S   I+TWG G              GQLGHG+  +  +P 
Sbjct: 613 IVEASVEEIACGSYHVAVLTSKSEIYTWGKG------------LNGQLGHGNVENKREPA 643

Query: 385 MIDLGENVKAVQVSCGFNHTGAI 386
           ++      +   ++CG N T  I
Sbjct: 673 VVGFLREKQVKAITCGSNFTAVI 643

[Close]

BLAST of Cp4.1LG19g00970 vs. TAIR 10
Match: AT5G60870.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 129.8 bits (325), Expect = 4.8e-30
Identity = 92/307 (29.97%), Postives = 141/307 (45.93%), Query Frame = 0


Query: 37  VWGNGDFGRLGLGNLDSQWRPVACSSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFG 96
           +WG GD GRLG G  +S + P     F+   ++ IA GG H++ LT  G V+  G   FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182

Query: 97  QLGILEEQGYCTHGVSVQEPVEVRIQK----EAVHIAAGYNHSCVVTADGELYMWGM-NS 156
            LG         H V  +E V  R+      +   IA    H+  +T  GELYMWG    
Sbjct: 183 ALG---------HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEG 242

Query: 157 SGQLGL----GKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTDGGEVLSWGDGRSG 216
            G+LGL    G      + +P+KV +L  + +   + G   +MA+T  G++ +WG   + 
Sbjct: 243 DGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNY 302

Query: 217 RLGHGHESSLLGFLKSTSEYTPRLIKELEGIKSFGEANKETTPSMISTLLNCEEVSCGGY 276
            LG G          +   + P  +  LEG++                     +++CGGY
Sbjct: 303 ELGRG---------DNLGGWEPMPVPSLEGVR-------------------ITQIACGGY 362

Query: 277 HTCVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPV--SCGWKHTAAIS-G 332
           H+  LT+ G + SWG   +G LG+ S     +P ++E    K  V  + G   +AAI+ G
Sbjct: 363 HSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDG 391

[Close]

BLAST of Cp4.1LG19g00970 vs. TAIR 10
Match: AT5G60870.2 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 126.3 bits (316), Expect = 5.3e-29
Identity = 93/316 (29.43%), Postives = 141/316 (44.62%), Query Frame = 0


Query: 37  VWGNGDFGRLGLGNLDSQWRPVACSSFDREMLKDIACGGAHTLFLTESGRVYATGLNNFG 96
           +WG GD GRLG G  +S + P     F+   ++ IA GG H++ LT  G V+  G   FG
Sbjct: 54  IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 113

Query: 97  QLGILEEQGYCTHGVSVQEPVEVRIQK----EAVHIAAGYNHSCVVTADGELYMWGM-NS 156
            LG         H V  +E V  R+      +   IA    H+  +T  GELYMWG    
Sbjct: 114 ALG---------HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEG 173

Query: 157 SGQLGL----GKRSAKSVCLPTKVNSLDGIVIRRAALGSDHSMAVTDGGEVLSWGDGRSG 216
            G+LGL    G      + +P+KV +L  + +   + G   +MA+T  G++ +WG   + 
Sbjct: 174 DGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNY 233

Query: 217 RLGHGHESSLLGFLKSTSEYTPRLIKELEGIKSFGEANKETTPSMISTLLNCEEVSCGGY 276
            LG G          +   + P  +  LEG++                     +++CGGY
Sbjct: 234 ELGRG---------DNLGGWEPMPVPSLEGVR-------------------ITQIACGGY 293

Query: 277 HTCVLTKGGDLYSWGSNENGCLGNGSTSVFHLPEKVEGPFSKSPV--SCGWKHTAAISGG 336
           H+  LT+ G + SWG   +G LG+ S     +P ++E    K  V  + G   +AAI+G 
Sbjct: 294 HSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGW 331

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g00970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN03	2.8e-43	31.02	Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1	[more]
Q6PAV2	4.9e-40	33.15	Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=...	[more]
Q5PQN1	6.5e-40	32.87	Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus OX=10116 GN=Herc...	[more]
Q5GLZ8	4.2e-39	32.30	Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens OX=9606 GN=HERC4 PE=1...	[more]
Q15034	4.8e-35	30.79	Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens OX=9606 GN=HERC3 PE=1...	[more]

BLAST of Cp4.1LG19g00970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518662.1	2.27e-272	90.54	ultraviolet-B receptor UVR8 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022966331.1	6.23e-270	89.60	ultraviolet-B receptor UVR8 isoform X1 [Cucurbita maxima]	[more]
XP_023518663.1	4.92e-269	90.07	ultraviolet-B receptor UVR8 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022925248.1	5.11e-269	89.13	ultraviolet-B receptor UVR8 isoform X3 [Cucurbita moschata]	[more]
KAG6595621.1	8.46e-268	88.89	putative E3 ubiquitin-protein ligase HERC4, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Cp4.1LG19g00970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HP08	3.01e-270	89.60	ultraviolet-B receptor UVR8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114660...	[more]
A0A6J1EEN4	2.47e-269	89.13	ultraviolet-B receptor UVR8 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1HMP4	6.53e-267	89.13	ultraviolet-B receptor UVR8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114660...	[more]
A0A6J1DMZ3	1.38e-243	81.04	ultraviolet-B receptor UVR8 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1HRS2	6.69e-240	81.80	PH, RCC1 and FYVE domains-containing protein 1 isoform X3 OS=Cucurbita maxima OX...	[more]

BLAST of Cp4.1LG19g00970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08710.1	5.4e-143	61.35	Regulator of chromosome condensation (RCC1) family protein	[more]
AT5G63860.1	2.0e-44	31.02	Regulator of chromosome condensation (RCC1) family protein	[more]
AT1G69710.1	2.1e-30	29.77	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]
AT5G60870.1	4.8e-30	29.97	Regulator of chromosome condensation (RCC1) family protein	[more]
AT5G60870.2	5.3e-29	29.43	Regulator of chromosome condensation (RCC1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000408	Regulator of chromosome condensation, RCC1	PRINTS	PR00633	RCCNDNSATION	coord: 142..158 score: 26.47 coord: 182..198 score: 38.24 coord: 68..81 score: 42.86 coord: 34..50 score: 46.08 coord: 198..212 score: 35.56 coord: 87..103 score: 38.24
IPR000408	Regulator of chromosome condensation, RCC1	PFAM	PF00415	RCC1	coord: 276..322 e-value: 2.1E-11 score: 44.3 coord: 141..192 e-value: 6.7E-12 score: 45.8 coord: 196..272 e-value: 5.5E-8 score: 33.3 coord: 343..385 e-value: 4.7E-6 score: 27.1
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 142..195 score: 15.5693
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 276..325 score: 12.091999
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 33..84 score: 12.1121
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 85..141 score: 13.0769
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 325..388 score: 11.2478
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 196..275 score: 12.071899
None	No IPR available	PFAM	PF13540	RCC1_2	coord: 69..97 e-value: 2.7E-10 score: 39.8
None	No IPR available	PANTHER	PTHR45622	UBIQUITIN-PROTEIN LIGASE E3A-RELATED	coord: 244..388
None	No IPR available	PANTHER	PTHR45622	UBIQUITIN-PROTEIN LIGASE E3A-RELATED	coord: 29..239
None	No IPR available	PANTHER	PTHR45622:SF21	OS11G0545800 PROTEIN	coord: 244..388
None	No IPR available	PANTHER	PTHR45622:SF21	OS11G0545800 PROTEIN	coord: 29..239
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	GENE3D	2.130.10.30		coord: 23..239 e-value: 2.0E-56 score: 193.3
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	GENE3D	2.130.10.30		coord: 240..388 e-value: 4.9E-33 score: 116.5
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	SUPERFAMILY	50985	RCC1/BLIP-II	coord: 312..385
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	SUPERFAMILY	50985	RCC1/BLIP-II	coord: 35..335

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g00970.1	Cp4.1LG19g00970.1	mRNA