Cp4.1LG19g00340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g00340
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Eukaryotic translation initiation factor 3 subunit E
Location	Cp4.1LG19: 276521 .. 280288 (-)
RNA-Seq Expression	Cp4.1LG19g00340
Synteny	Cp4.1LG19g00340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGTACGACCTAACTCCGCGAATCGCTCCAAATTTGGACCGTCATCTTGTTTTCCCTCTCCTCGAATTCCTTCAAGAGAGGCAGTTTTACCCTGACGAGCAGATCCTCAAGGCCAAAATCGAGCTTCTCAACAGGACCAATATGGTTGATTACGCCATGGACATTCACAAGTCGCTGTATCACACCGACGATGTTCCTCAAGGCATGGCCATCTCTTGGTTTTTTATTTTATTTTGTTACTTGTTTTTTGTATGTTGACGTGTTTGTGATGGGATTGGTGCAGACATGGTGGATAGAAGGGTGGAAGTGGTGGCGAGGCTTAAGGCTTTGGAGGAGTCCGCGGCGCCACTTGTTGCTTTTCTGCAGAATCCGGCTGCTGTTCAGGAACTGAGGGCTGATAAGCAGTACAATCTTCAAATGCTTAATGATCGTTATCAGGTACATTCATGGTCTCAGAATTACAATTTATTTTTTCTGTTGTACTTATGCCTTCTCTCCAATAAACAACGTTCAATTCTTTGTTCGGATGTAATATCATCTTGGTTGAAGCTCAGTGCTGCTATTTATGTTCTTTCTTTTATGTTCTAGCTCCTTTTGCATAAAGCTCTTGTTACATTTGATTGGTTTGGGGGTTCTTTAACTTTACATTTAGTATTGAGAGTGGTTATTGAATTAGCTTTTTGGGTTTCGTAAAAACCTATTTTCAGATTGGTCCAGATCAAATAGAAGCGTTATACCAATATGCCAAATTTCAGTTCGAGTGTGGGAACTACTCTGGTGCTGCTGACTATCTCTATCAGTACAGAGCCTTATGCACAGACAGTGAAAGGAGCCTGAGTGCTCTGTGGGGAAAATTGGCAGCTGAAATTTTAATGCAGAATTGGGATATTGCTGTCGAGGAGCTTAATCGTTTAAAAGAGATTATCGACTCCAAGGTGGGGTGACCTATCTAGCTCTTTTTATTTGTGTGTACAATACATGCCATCGCTCTACTGACTTTCTTTCTTGTGATGCCTAATGAAGAATTTCTCATCACCGATGAAACAAGTGCAAGGCAGAATATGGTTGATGCATTGGAGCCTCTTCATATTTTTCAATCACGACAATGGAAGAACACAGATAATTGACCTGTTTAATCAAGATAAGTAAGTCTACTGGGTCTTGTCTGTTTTCACTACTTTTTATTGATAATACATGTAGAAGTACTCTTCCCTGTTTTGATAAGTTAATTATCTGCAATTCTTAATTATGTGAAGACATCTTCTTAAAAAAAAAAGAAGTTCCTTTAGGGCTCATTTTGCTTGATTGGAGCCTCTTAAAAATAATGCTTCATATGTTCTCCATGATAAGGTCATGGAAGACAAAATGAAAAACATGCCCTTATGTAGATGAGATAATTGATGTGGATATTCATAATGAGGGCCCATGTCTAACAGTAAAACATGAAAATAAGTTTGTGACATGAATTAAGAATAGAGGATCCATCTGAGTGATGAGTTAATTCAGGCCTTTCCCTGTTGTTTTAATGAGGTGATACTTTTCTATTCTGTAGGTATTTAAATGCCATTCAAACCAATGCTCCCCATCTTTTACGCTATTTGGCCACTGCATTCATTGTTAACAAAAGGCGGCGGCCACAATTCAAAGATTTTATCAAGGTTATTCAGCAGGAACAATATTCCTATAATGATCCCATCACAGAGTTTTTGACTTGTGTGTATGTCAATTATGATTTCGATGGGGCACAAAAGAAGATGAGGGAGTGCGAAGAAGTAAGTTTCCTGATTCTTTTTTTCTTTACGAGTAATTAGAGAGTATATCCTTATTTCCAATGGTGCTTTTTGTTCATTGTTTAGAGGTGGTGTTCGGACGGTTTGGTTACAAAGTCTTAGCTGGTCGTGAACGATAAATGCTGTCAATTCTTAAAATTCTGTTGTGTTTTCAAGGCATAATTTACCACTTGTCCTCAATGTAGGTTATATTGAACGATCCTTTCCTAGGAAAGAGGCTTGAAGAAGGTAACCTTTCCACCGTTCCTTTGAGAGATGAGTTTTTGGAAACTGCTCGTCTTTTCGTCTTTGAGACTTTCTGCAGAATACATCAGCGTATTGATATGAGGTGCATACTTATTCATTCTCTCTTAAAAGTTGTTATCTACTGATAGTTATTTATTGGGTGAATAATGCTACTCTTTCCTTGTGTACGATAGAAAAGTGTATATCATGCAAGATTTTGGAGGGTCAAAATCCTGATGATAGCATTGAACATGCATTGAGCAATTAACATGCTTGTATATTTACACATTTTCTGTGACAATTGTGGAAACTAACGAATAGTAGCTAGCTGTGTAATCAAGAGAAAAGACTTTTGGCTTACCTTCTCAGCATTTTTAAACTTGTCTGTGGTTTCTACTCTACGAGTTTACAATACTCTCTCCTTTTTACTTTTTTTAGGAGCTTAAATTTGCAAACGGGTGTCAACAATATTCATTGGGAGTTTGAAATTTATATCATACAAATTGTATTGATTAGAACTGTAGATGAATTTTAAGATATCTAATTTGAGAAGCTCATCTTTGTTTCTTGTTTGTGTTTACCTCCTCTGTTCTCCATTCTTATCACTTGAAGATGGGATGGGTGGGAGCAAAAGAGGAAGAAAGGAGGTTTTACTCTAAGTTTGTAGTAAGATTGCCTTCAGCCAGTTAGTAACAGATCTGATTCTAAATCCTCTCTTTTAGTGCTGCTAAATAATGAGGTTCTCTAATGTATAAAGCTTGGTTCTCAGGATTTGGATTGGTAAAACAATACTTCCTGACCATTATTGTATATCTTCTGTCATTATAACTTGTGACTTTTCTTGGTTCATTTCGTTGTTATTATCTCAAGTGCTGGTAACTTGTGGCAGCGTCCTTGCTGAAAAGTTGAACTTGAATTATGAGGAAGCTGAGCGGTGGATTGTAAATCTCGTGCGCACGTCAAAGCTTGATGCAAAGCTTGATTCAAAGACAGGAACGGTTATAATGGAAACGAACGAGCCTGACGTGTAAGTTTATTTCCTTTGTTTTCTCAACCTTCCCCCACAGTCCGTCCTATATCTGTGAAATGTTTACAACTCTTAGATTACTGCCACAAAGTACTGTTCTTTTTAGTCAAATGAAATTTTGATCATTGAATTTTCAGGGTTGGGTCTGCTAGGCATTTGAAAAACTCTAGCCTTCGAACTTGTAATTGGACTTAGTTCTTAAACTTTGAGAAAAATTTCAAAATTTTGAAAGTTTACAAGGACCAAAACTTATAATTGGACTTAGTTTTGGCTCAATTATTTGAGGTTGTAGAACTTGTGGTAATAAATTGTTAATATGAAATTGACACGCTTCGTTTTCAGGCATGAGCAATTGATCGACCACACGAAGTCATTATCTGGGCGTACTTACAAGTTAGTGACCCAACTTCTAGAGCATGCACAGGCTCAAGCAGCTAGATAAATTTTGGGTGGTGCCTCTTTTTTTCCTGAATTTATGTTTTTTTTTTTTTTTTNTCACTATGAGATTAGAGCAAGATTTCCATATCTTTTCCCCCATAATTTATGCTAATTTTATGCTTCCATATTCTTATACCAATGATTATTCTAGAAAAATCTTAACAAAAATGTAAAGAATTTTTTTAATATACTAATTACTAATAAATGTTTTGTAATATTTATGTGGAGACCACCATTTCTCTCATTATTTTTATCTTAGTTCTGTTGATCCTACACTTTCGA

mRNA sequence

ATGGCGTTGTACGACCTAACTCCGCGAATCGCTCCAAATTTGGACCGTCATCTTGTTTTCCCTCTCCTCGAATTCCTTCAAGAGAGGCAGTTTTACCCTGACGAGCAGATCCTCAAGGCCAAAATCGAGCTTCTCAACAGGACCAATATGGTTGATTACGCCATGGACATTCACAAGTCGCTGTATCACACCGACGATGTTCCTCAAGGCATGGCCATCTCTTGGTTTTTTATTTTATTTTACATGGTGGATAGAAGGGTGGAAGTGGTGGCGAGGCTTAAGGCTTTGGAGGAGTCCGCGGCGCCACTTGTTGCTTTTCTGCAGAATCCGGCTGCTGTTCAGGAACTGAGGGCTGATAAGCAGTACAATCTTCAAATGCTTAATGATCGTTATCAGAATTTCTCATCACCGATGAAACAAGTGCAAGGCAGAATATGGTTGATGCATTGGAGCCTCTTCATATTTTTCAATCACGACAATGGAAGAACACAGATAATTGACCTGTTTAATCAAGATAAGTATTTAAATGCCATTCAAACCAATGCTCCCCATCTTTTACGCTATTTGGCCACTGCATTCATTGTTAACAAAAGGCGGCGGCCACAATTCAAAGATTTTATCAAGGTTATTCAGCAGGAACAATATTCCTATAATGATCCCATCACAGAGTTTTTGACTTGTGTGTATGTCAATTATGATTTCGATGGGGCACAAAAGAAGATGAGGGAGTGCGAAGAAGATTTGGATTGCGTCCTTGCTGAAAAGTTGAACTTGAATTATGAGGAAGCTGAGCGGTGGATTGTAAATCTCGTGCGCACGTCAAAGCTTGATGCAAAGCTTGATTCAAAGACAGGAACGGTTATAATGGAAACGAACGAGCCTGACGTGCATGAGCAATTGATCGACCACACGAAGTCATTATCTGGGCGTACTTACAAGTTAGTGACCCAACTTCTAGAGCATGCACAGGCTCAAGCAGCTAGATAAATTTTGGGTGGTGCCTCTTTTTTTCCTGAATTTATGTTTTTTTTTTTTTTTTNTCACTATGAGATTAGAGCAAGATTTCCATATCTTTTCCCCCATAATTTATGCTAATTTTATGCTTCCATATTCTTATACCAATGATTATTCTAGAAAAATCTTAACAAAAATGTAAAGAATTTTTTTAATATACTAATTACTAATAAATGTTTTGTAATATTTATGTGGAGACCACCATTTCTCTCATTATTTTTATCTTAGTTCTGTTGATCCTACACTTTCGA

Coding sequence (CDS)

ATGGCGTTGTACGACCTAACTCCGCGAATCGCTCCAAATTTGGACCGTCATCTTGTTTTCCCTCTCCTCGAATTCCTTCAAGAGAGGCAGTTTTACCCTGACGAGCAGATCCTCAAGGCCAAAATCGAGCTTCTCAACAGGACCAATATGGTTGATTACGCCATGGACATTCACAAGTCGCTGTATCACACCGACGATGTTCCTCAAGGCATGGCCATCTCTTGGTTTTTTATTTTATTTTACATGGTGGATAGAAGGGTGGAAGTGGTGGCGAGGCTTAAGGCTTTGGAGGAGTCCGCGGCGCCACTTGTTGCTTTTCTGCAGAATCCGGCTGCTGTTCAGGAACTGAGGGCTGATAAGCAGTACAATCTTCAAATGCTTAATGATCGTTATCAGAATTTCTCATCACCGATGAAACAAGTGCAAGGCAGAATATGGTTGATGCATTGGAGCCTCTTCATATTTTTCAATCACGACAATGGAAGAACACAGATAATTGACCTGTTTAATCAAGATAAGTATTTAAATGCCATTCAAACCAATGCTCCCCATCTTTTACGCTATTTGGCCACTGCATTCATTGTTAACAAAAGGCGGCGGCCACAATTCAAAGATTTTATCAAGGTTATTCAGCAGGAACAATATTCCTATAATGATCCCATCACAGAGTTTTTGACTTGTGTGTATGTCAATTATGATTTCGATGGGGCACAAAAGAAGATGAGGGAGTGCGAAGAAGATTTGGATTGCGTCCTTGCTGAAAAGTTGAACTTGAATTATGAGGAAGCTGAGCGGTGGATTGTAAATCTCGTGCGCACGTCAAAGCTTGATGCAAAGCTTGATTCAAAGACAGGAACGGTTATAATGGAAACGAACGAGCCTGACGTGCATGAGCAATTGATCGACCACACGAAGTCATTATCTGGGCGTACTTACAAGTTAGTGACCCAACTTCTAGAGCATGCACAGGCTCAAGCAGCTAGATAA

Protein sequence

MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKSLYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADKQYNLQMLNDRYQNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRECEEDLDCVLAEKLNLNYEEAERWIVNLVRTSKLDAKLDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR

Homology

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BLAST of Cp4.1LG19g00340 vs. ExPASy Swiss-Prot
Match: Q9C5Z3 (Eukaryotic translation initiation factor 3 subunit E OS=Arabidopsis thaliana OX=3702 GN=TIF3E1 PE=1 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 5.5e-133
Identity = 264/445 (59.33%), Postives = 289/445 (64.94%), Query Frame = 0


Query: 4   YDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKSLYH 63
           YDLTP IAPNLDRHLVFP+ EFLQERQ YPDEQILK+KI+LLN+TNMVDYAMDIHKSLYH
Sbjct: 8   YDLTPLIAPNLDRHLVFPIFEFLQERQLYPDEQILKSKIQLLNQTNMVDYAMDIHKSLYH 67

Query: 64  TDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADKQYN 123
           T+D PQ            MV+RR EVVARLK+LEE+AAPLV+FL NP AVQELRADKQYN
Sbjct: 68  TEDAPQ-----------EMVERRTEVVARLKSLEEAAAPLVSFLLNPNAVQELRADKQYN 127

Query: 124 LQMLNDRYQ--------------------------------------------------- 183
           LQML +RYQ                                                   
Sbjct: 128 LQMLKERYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRTLCSNLERSLSALWGKLA 187

Query: 184 -------------------------NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIID 243
                                    +FSSP+ QVQ RIWLMHW L+IFFNHDNGRTQIID
Sbjct: 188 SEILMQNWDIALEELNRLKEIIDSKSFSSPLNQVQNRIWLMHWGLYIFFNHDNGRTQIID 247

Query: 244 LFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTC 303
           LFNQDKYLNAIQT+APHLLRYLATAFIVNKRRRPQ K+FIKVIQQE YSY DPI EFL C
Sbjct: 248 LFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQLKEFIKVIQQEHYSYKDPIIEFLAC 307

Query: 304 VYVNYDFDGAQKKMRECEE-----------------------------------DLDC-- 329
           V+VNYDFDGAQKKM+ECEE                                   +  C  
Sbjct: 308 VFVNYDFDGAQKKMKECEEVIVNDPFLGKRVEDGNFSTVPLRDEFLENARLFVFETYCKI 367

[Close]

BLAST of Cp4.1LG19g00340 vs. ExPASy Swiss-Prot
Match: Q3T102 (Eukaryotic translation initiation factor 3 subunit E OS=Bos taurus OX=9913 GN=EIF3E PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.7e-73
Identity = 173/434 (39.86%), Postives = 229/434 (52.76%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLT RIA  LDRHLVFPLLEFL  ++ Y ++++L+ K++LL+ TNMVD+AMD++K+
Sbjct: 1   MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKN 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELR--- 120
           LY +DD+P  +            ++R  VVA+LK L+    P+V   ++P   ++++   
Sbjct: 61  LY-SDDIPHALR-----------EKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTR 120

Query: 121 ---------ADKQYNLQMLND---RYQNF------------------------------- 180
                    ADK    Q   D   RY  F                               
Sbjct: 121 DGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSS 180

Query: 181 ---------------------------------SSPMKQVQGRIWLMHWSLFIFFNHDNG 240
                                            SSP++ +Q R WL+HWSLF+FFNH  G
Sbjct: 181 LWGKLASEILMQNWDAAMEDLTRLKETIDNNSVSSPLQSLQQRTWLIHWSLFVFFNHPKG 240

Query: 241 RTQIIDLF-NQDKYLNAIQTNAPHLLRYLATAFIVNK---RRRPQFKDFIKVIQQEQYSY 300
           R  IIDLF  Q +YLNAIQT  PH+LRYL TA I NK   +RR   KD +KVIQQE Y+Y
Sbjct: 241 RDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVLKDLVKVIQQESYTY 300

Query: 301 NDPITEFLTCVYVNYDFDGAQKKMRECEEDL----------------------------- 319
            DPITEF+ C+YVN+DFDGAQKK+RECE  L                             
Sbjct: 301 KDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIENARLFIFETFCRIH 360

[Close]

BLAST of Cp4.1LG19g00340 vs. ExPASy Swiss-Prot
Match: P60228 (Eukaryotic translation initiation factor 3 subunit E OS=Homo sapiens OX=9606 GN=EIF3E PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.7e-73
Identity = 173/434 (39.86%), Postives = 229/434 (52.76%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLT RIA  LDRHLVFPLLEFL  ++ Y ++++L+ K++LL+ TNMVD+AMD++K+
Sbjct: 1   MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKN 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELR--- 120
           LY +DD+P  +            ++R  VVA+LK L+    P+V   ++P   ++++   
Sbjct: 61  LY-SDDIPHALR-----------EKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTR 120

Query: 121 ---------ADKQYNLQMLND---RYQNF------------------------------- 180
                    ADK    Q   D   RY  F                               
Sbjct: 121 DGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSS 180

Query: 181 ---------------------------------SSPMKQVQGRIWLMHWSLFIFFNHDNG 240
                                            SSP++ +Q R WL+HWSLF+FFNH  G
Sbjct: 181 LWGKLASEILMQNWDAAMEDLTRLKETIDNNSVSSPLQSLQQRTWLIHWSLFVFFNHPKG 240

Query: 241 RTQIIDLF-NQDKYLNAIQTNAPHLLRYLATAFIVNK---RRRPQFKDFIKVIQQEQYSY 300
           R  IIDLF  Q +YLNAIQT  PH+LRYL TA I NK   +RR   KD +KVIQQE Y+Y
Sbjct: 241 RDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVLKDLVKVIQQESYTY 300

Query: 301 NDPITEFLTCVYVNYDFDGAQKKMRECEEDL----------------------------- 319
            DPITEF+ C+YVN+DFDGAQKK+RECE  L                             
Sbjct: 301 KDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIENARLFIFETFCRIH 360

[Close]

BLAST of Cp4.1LG19g00340 vs. ExPASy Swiss-Prot
Match: Q4R6G8 (Eukaryotic translation initiation factor 3 subunit E OS=Macaca fascicularis OX=9541 GN=EIF3E PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.7e-73
Identity = 173/434 (39.86%), Postives = 229/434 (52.76%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLT RIA  LDRHLVFPLLEFL  ++ Y ++++L+ K++LL+ TNMVD+AMD++K+
Sbjct: 1   MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKN 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELR--- 120
           LY +DD+P  +            ++R  VVA+LK L+    P+V   ++P   ++++   
Sbjct: 61  LY-SDDIPHALR-----------EKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTR 120

Query: 121 ---------ADKQYNLQMLND---RYQNF------------------------------- 180
                    ADK    Q   D   RY  F                               
Sbjct: 121 DGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSS 180

Query: 181 ---------------------------------SSPMKQVQGRIWLMHWSLFIFFNHDNG 240
                                            SSP++ +Q R WL+HWSLF+FFNH  G
Sbjct: 181 LWGKLASEILMQNWDAAMEDLTRLKETIDNNSVSSPLQSLQQRTWLIHWSLFVFFNHPKG 240

Query: 241 RTQIIDLF-NQDKYLNAIQTNAPHLLRYLATAFIVNK---RRRPQFKDFIKVIQQEQYSY 300
           R  IIDLF  Q +YLNAIQT  PH+LRYL TA I NK   +RR   KD +KVIQQE Y+Y
Sbjct: 241 RDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVLKDLVKVIQQESYTY 300

Query: 301 NDPITEFLTCVYVNYDFDGAQKKMRECEEDL----------------------------- 319
            DPITEF+ C+YVN+DFDGAQKK+RECE  L                             
Sbjct: 301 KDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIENARLFIFETFCRIH 360

[Close]

BLAST of Cp4.1LG19g00340 vs. ExPASy Swiss-Prot
Match: P60229 (Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus OX=10090 GN=Eif3e PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.7e-73
Identity = 173/434 (39.86%), Postives = 229/434 (52.76%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLT RIA  LDRHLVFPLLEFL  ++ Y ++++L+ K++LL+ TNMVD+AMD++K+
Sbjct: 1   MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKN 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELR--- 120
           LY +DD+P  +            ++R  VVA+LK L+    P+V   ++P   ++++   
Sbjct: 61  LY-SDDIPHALR-----------EKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTR 120

Query: 121 ---------ADKQYNLQMLND---RYQNF------------------------------- 180
                    ADK    Q   D   RY  F                               
Sbjct: 121 DGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSS 180

Query: 181 ---------------------------------SSPMKQVQGRIWLMHWSLFIFFNHDNG 240
                                            SSP++ +Q R WL+HWSLF+FFNH  G
Sbjct: 181 LWGKLASEILMQNWDAAMEDLTRLKETIDNNSVSSPLQSLQQRTWLIHWSLFVFFNHPKG 240

Query: 241 RTQIIDLF-NQDKYLNAIQTNAPHLLRYLATAFIVNK---RRRPQFKDFIKVIQQEQYSY 300
           R  IIDLF  Q +YLNAIQT  PH+LRYL TA I NK   +RR   KD +KVIQQE Y+Y
Sbjct: 241 RDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVLKDLVKVIQQESYTY 300

Query: 301 NDPITEFLTCVYVNYDFDGAQKKMRECEEDL----------------------------- 319
            DPITEF+ C+YVN+DFDGAQKK+RECE  L                             
Sbjct: 301 KDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIENARLFIFETFCRIH 360

[Close]

BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match: PQM35239.1 (Eukaryotic translation initiation factor 3 subunit E [Prunus yedoensis var. nudiflora])

HSP 1 Score: 557 bits (1435), Expect = 1.70e-198
Identity = 284/332 (85.54%), Postives = 301/332 (90.66%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLTPRIAPNLDRHLVFPLLEFLQERQ YPDEQILK+KIELLN+TNMVDYAMDIHKS
Sbjct: 1   MAEYDLTPRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120
           LYHT+DVPQ M           V+RRVEVVARLKALEESAAPLV FLQN AAVQELRADK
Sbjct: 61  LYHTEDVPQDM-----------VERRVEVVARLKALEESAAPLVNFLQNAAAVQELRADK 120

Query: 121 QYNLQMLNDRYQNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT 180
           QYNLQML++RYQ+FSSPM QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT
Sbjct: 121 QYNLQMLHERYQSFSSPMNQVQNRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT 180

Query: 181 NAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKK 240
           NAPHL+RYLATAFIVNKRRRPQFKDFIKVIQQEQ SY DPITEFLTCVYVNYDFDGAQKK
Sbjct: 181 NAPHLVRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLTCVYVNYDFDGAQKK 240

Query: 241 MRECEEDLD----CVLAEKLNLNYEEAERWIVNLVRTSKLDAKLDSKTGTVIMETNEPDV 300
           MRECEE L      VLAEKLNLNYEEAERWIVNL+R+SKLDAK+DS++GTVIME N P+V
Sbjct: 241 MRECEESLGDRGVIVLAEKLNLNYEEAERWIVNLIRSSKLDAKIDSQSGTVIMEPNHPNV 300

Query: 301 HEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR 328
           +EQLIDHTK+LSGRTYKLV QLLEHAQ+Q AR
Sbjct: 301 YEQLIDHTKALSGRTYKLVGQLLEHAQSQVAR 321

[Close]

BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match: XP_023518937.1 (eukaryotic translation initiation factor 3 subunit E [Cucurbita pepo subsp. pepo])

HSP 1 Score: 559 bits (1440), Expect = 1.99e-197
Identity = 313/448 (69.87%), Postives = 314/448 (70.09%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS
Sbjct: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120
           LYHTDDVPQ M           VDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK
Sbjct: 61  LYHTDDVPQDM-----------VDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120

Query: 121 QYNLQMLNDRYQ------------------------------------------------ 180
           QYNLQMLNDRYQ                                                
Sbjct: 121 QYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTDSERSLSALWG 180

Query: 181 ----------------------------NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQ 240
                                       NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQ
Sbjct: 181 KLAAEILMQNWDIAVEELNRLKEIIDSKNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQ 240

Query: 241 IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF 300
           IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF
Sbjct: 241 IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF 300

Query: 301 LTCVYVNYDFDGAQKKMRECEE-----------------------------------DLD 328
           LTCVYVNYDFDGAQKKMRECEE                                   +  
Sbjct: 301 LTCVYVNYDFDGAQKKMRECEEVILNDPFLGKRLEEGNLSTVPLRDEFLETARLFVFETF 360

[Close]

BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match: KAG7027648.1 (Eukaryotic translation initiation factor 3 subunit E, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 555 bits (1429), Expect = 9.39e-196
Identity = 310/448 (69.20%), Postives = 313/448 (69.87%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLT RIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS
Sbjct: 1   MAEYDLTRRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120
           LYHTDDVPQGMAISW           VEVVARLKALEESAAPLVAFLQNPAAVQELRADK
Sbjct: 61  LYHTDDVPQGMAISW-----------VEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120

Query: 121 QYNLQMLNDRYQ------------------------------------------------ 180
           QYNLQMLNDRYQ                                                
Sbjct: 121 QYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTDSERSLSALWG 180

Query: 181 ----------------------------NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQ 240
                                       NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQ
Sbjct: 181 KLAAEILMQNWDIAVEELNRLKEIIDSKNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQ 240

Query: 241 IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF 300
           IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPIT+F
Sbjct: 241 IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITQF 300

Query: 301 LTCVYVNYDFDGAQKKMRECEE-----------------------------------DLD 328
           LTCVYVNYDFDGAQKKMRECEE                                   +  
Sbjct: 301 LTCVYVNYDFDGAQKKMRECEEVILNDPFLGKRLEEGNLSTVPLRDEFLETARLFVFETF 360

[Close]

BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match: XP_022966317.1 (eukaryotic translation initiation factor 3 subunit E [Cucurbita maxima])

HSP 1 Score: 554 bits (1427), Expect = 1.89e-195
Identity = 310/448 (69.20%), Postives = 313/448 (69.87%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS
Sbjct: 1   MAEYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120
           LYHTDDVPQ M           VDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK
Sbjct: 61  LYHTDDVPQDM-----------VDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120

Query: 121 QYNLQMLNDRYQ------------------------------------------------ 180
           QYNLQMLNDRYQ                                                
Sbjct: 121 QYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTDSERSLSALWG 180

Query: 181 ----------------------------NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQ 240
                                       NFSSPMKQVQGRIWLMHWSLFIFFNH+NGRTQ
Sbjct: 181 KLAAEILMQNWDIAVEELNRLKEIIDSKNFSSPMKQVQGRIWLMHWSLFIFFNHENGRTQ 240

Query: 241 IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF 300
           IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF
Sbjct: 241 IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF 300

Query: 301 LTCVYVNYDFDGAQKKMRECEE-----------------------------------DLD 328
           LTCVYVNYDFDGAQKKMRECEE                                   +  
Sbjct: 301 LTCVYVNYDFDGAQKKMRECEEVILNDPFLGKRLEEGNLSTVPLRDEFLETARLFVFETF 360

[Close]

BLAST of Cp4.1LG19g00340 vs. NCBI nr
Match: KAA3472103.1 (Eukaryotic translation initiation factor 3 subunit E [Gossypium australe])

HSP 1 Score: 543 bits (1399), Expect = 8.05e-193
Identity = 275/344 (79.94%), Postives = 295/344 (85.76%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLTPRI PNLDRHLVFPLLEFLQERQ YPDEQILKAKIELLN+TNMVDYAMDIHKS
Sbjct: 1   MATYDLTPRIGPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120
           LYHTDDVPQ M           V+RRVEVVARLKALE++AAPLV FLQNP AVQELRADK
Sbjct: 61  LYHTDDVPQDM-----------VERRVEVVARLKALEDAAAPLVTFLQNPNAVQELRADK 120

Query: 121 QYNLQMLNDRYQNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT 180
           QYNLQMLNDRYQNFSSP+ QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT
Sbjct: 121 QYNLQMLNDRYQNFSSPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT 180

Query: 181 NAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKK 240
           +APHLLRYLATAFIVNKRRRPQFK+FIKVIQQ+Q SY DPITEFL CVYVNY+FDGAQKK
Sbjct: 181 SAPHLLRYLATAFIVNKRRRPQFKEFIKVIQQDQCSYKDPITEFLACVYVNYEFDGAQKK 240

Query: 241 MRECEEDLDCVLAE----------------KLNLNYEEAERWIVNLVRTSKLDAKLDSKT 300
           M+ECEE L C   +                KLNLNYEE ERWIVNL+R SKLDAK+DSKT
Sbjct: 241 MKECEEYLSCGYEDMILQSMEKLRKQLNILKLNLNYEEGERWIVNLIRNSKLDAKIDSKT 300

Query: 301 GTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR 328
           GTVIME N+P+V+EQLIDHTK+L GRT+KLV+QLL+H QAQ AR
Sbjct: 301 GTVIMEPNQPNVYEQLIDHTKALQGRTFKLVSQLLDHVQAQPAR 333

[Close]

BLAST of Cp4.1LG19g00340 vs. ExPASy TrEMBL
Match: A0A314UKL5 (Eukaryotic translation initiation factor 3 subunit E OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_00301 PE=3 SV=1)

HSP 1 Score: 557 bits (1435), Expect = 8.24e-199
Identity = 284/332 (85.54%), Postives = 301/332 (90.66%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLTPRIAPNLDRHLVFPLLEFLQERQ YPDEQILK+KIELLN+TNMVDYAMDIHKS
Sbjct: 1   MAEYDLTPRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120
           LYHT+DVPQ M           V+RRVEVVARLKALEESAAPLV FLQN AAVQELRADK
Sbjct: 61  LYHTEDVPQDM-----------VERRVEVVARLKALEESAAPLVNFLQNAAAVQELRADK 120

Query: 121 QYNLQMLNDRYQNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT 180
           QYNLQML++RYQ+FSSPM QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT
Sbjct: 121 QYNLQMLHERYQSFSSPMNQVQNRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT 180

Query: 181 NAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKK 240
           NAPHL+RYLATAFIVNKRRRPQFKDFIKVIQQEQ SY DPITEFLTCVYVNYDFDGAQKK
Sbjct: 181 NAPHLVRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLTCVYVNYDFDGAQKK 240

Query: 241 MRECEEDLD----CVLAEKLNLNYEEAERWIVNLVRTSKLDAKLDSKTGTVIMETNEPDV 300
           MRECEE L      VLAEKLNLNYEEAERWIVNL+R+SKLDAK+DS++GTVIME N P+V
Sbjct: 241 MRECEESLGDRGVIVLAEKLNLNYEEAERWIVNLIRSSKLDAKIDSQSGTVIMEPNHPNV 300

Query: 301 HEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR 328
           +EQLIDHTK+LSGRTYKLV QLLEHAQ+Q AR
Sbjct: 301 YEQLIDHTKALSGRTYKLVGQLLEHAQSQVAR 321

[Close]

BLAST of Cp4.1LG19g00340 vs. ExPASy TrEMBL
Match: A0A6J1HMM9 (Eukaryotic translation initiation factor 3 subunit E OS=Cucurbita maxima OX=3661 GN=LOC111466010 PE=3 SV=1)

HSP 1 Score: 554 bits (1427), Expect = 9.16e-196
Identity = 310/448 (69.20%), Postives = 313/448 (69.87%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS
Sbjct: 1   MAEYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120
           LYHTDDVPQ M           VDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK
Sbjct: 61  LYHTDDVPQDM-----------VDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120

Query: 121 QYNLQMLNDRYQ------------------------------------------------ 180
           QYNLQMLNDRYQ                                                
Sbjct: 121 QYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTDSERSLSALWG 180

Query: 181 ----------------------------NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQ 240
                                       NFSSPMKQVQGRIWLMHWSLFIFFNH+NGRTQ
Sbjct: 181 KLAAEILMQNWDIAVEELNRLKEIIDSKNFSSPMKQVQGRIWLMHWSLFIFFNHENGRTQ 240

Query: 241 IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF 300
           IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF
Sbjct: 241 IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF 300

Query: 301 LTCVYVNYDFDGAQKKMRECEE-----------------------------------DLD 328
           LTCVYVNYDFDGAQKKMRECEE                                   +  
Sbjct: 301 LTCVYVNYDFDGAQKKMRECEEVILNDPFLGKRLEEGNLSTVPLRDEFLETARLFVFETF 360

[Close]

BLAST of Cp4.1LG19g00340 vs. ExPASy TrEMBL
Match: A0A5B6VSM5 (Eukaryotic translation initiation factor 3 subunit E OS=Gossypium australe OX=47621 GN=eif3e-a PE=4 SV=1)

HSP 1 Score: 543 bits (1399), Expect = 3.90e-193
Identity = 275/344 (79.94%), Postives = 295/344 (85.76%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLTPRI PNLDRHLVFPLLEFLQERQ YPDEQILKAKIELLN+TNMVDYAMDIHKS
Sbjct: 1   MATYDLTPRIGPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120
           LYHTDDVPQ M           V+RRVEVVARLKALE++AAPLV FLQNP AVQELRADK
Sbjct: 61  LYHTDDVPQDM-----------VERRVEVVARLKALEDAAAPLVTFLQNPNAVQELRADK 120

Query: 121 QYNLQMLNDRYQNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT 180
           QYNLQMLNDRYQNFSSP+ QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT
Sbjct: 121 QYNLQMLNDRYQNFSSPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQT 180

Query: 181 NAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKK 240
           +APHLLRYLATAFIVNKRRRPQFK+FIKVIQQ+Q SY DPITEFL CVYVNY+FDGAQKK
Sbjct: 181 SAPHLLRYLATAFIVNKRRRPQFKEFIKVIQQDQCSYKDPITEFLACVYVNYEFDGAQKK 240

Query: 241 MRECEEDLDCVLAE----------------KLNLNYEEAERWIVNLVRTSKLDAKLDSKT 300
           M+ECEE L C   +                KLNLNYEE ERWIVNL+R SKLDAK+DSKT
Sbjct: 241 MKECEEYLSCGYEDMILQSMEKLRKQLNILKLNLNYEEGERWIVNLIRNSKLDAKIDSKT 300

Query: 301 GTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR 328
           GTVIME N+P+V+EQLIDHTK+L GRT+KLV+QLL+H QAQ AR
Sbjct: 301 GTVIMEPNQPNVYEQLIDHTKALQGRTFKLVSQLLDHVQAQPAR 333

[Close]

BLAST of Cp4.1LG19g00340 vs. ExPASy TrEMBL
Match: A0A6J1EB55 (Eukaryotic translation initiation factor 3 subunit E OS=Cucurbita moschata OX=3662 GN=LOC111432445 PE=3 SV=1)

HSP 1 Score: 544 bits (1402), Expect = 5.82e-192
Identity = 306/448 (68.30%), Postives = 310/448 (69.20%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLTPRIAPNLDRHLVFPLLEFLQERQFY DEQILKAKIELLNRTNMVDYAMDIHKS
Sbjct: 1   MAEYDLTPRIAPNLDRHLVFPLLEFLQERQFYHDEQILKAKIELLNRTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120
           LYHTDDVPQ M           VDRRVEVV RLKALEESAAPLVAFLQNPAAVQELRADK
Sbjct: 61  LYHTDDVPQDM-----------VDRRVEVVTRLKALEESAAPLVAFLQNPAAVQELRADK 120

Query: 121 QYNLQMLNDRYQ------------------------------------------------ 180
           QYNLQMLNDRYQ                                                
Sbjct: 121 QYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTDSERSLSALWG 180

Query: 181 ----------------------------NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQ 240
                                       NFSS MKQVQGRIWLMHWSLFIFFNHDNGRTQ
Sbjct: 181 KLAAEILMQNWDIAVEELNRLKEIIDSKNFSSSMKQVQGRIWLMHWSLFIFFNHDNGRTQ 240

Query: 241 IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF 300
           IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF
Sbjct: 241 IIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEF 300

Query: 301 LTCVYVNYDFDGAQKKMRECEE-----------------------------------DLD 328
           LTCVYVNYDFDGAQKKMRECEE                                   +  
Sbjct: 301 LTCVYVNYDFDGAQKKMRECEEVILNDPFLGKRIEEGNLSTVPLRDEFLETARLFVFETF 360

[Close]

BLAST of Cp4.1LG19g00340 vs. ExPASy TrEMBL
Match: A0A2R6RU47 (Eukaryotic translation initiation factor 3 subunit E OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03957 PE=3 SV=1)

HSP 1 Score: 537 bits (1383), Expect = 6.87e-191
Identity = 273/335 (81.49%), Postives = 294/335 (87.76%), Query Frame = 0


Query: 1   MALYDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKS 60
           MA YDLTPRIAPNLDRHLVFPLLEFLQERQ Y DE ILKAKIELLN TNMVDYAMDIHKS
Sbjct: 1   MANYDLTPRIAPNLDRHLVFPLLEFLQERQLYADEDILKAKIELLNNTNMVDYAMDIHKS 60

Query: 61  LYHTDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADK 120
           LYHTDDVPQ M           V+RRVEVV RLKALEE+A PLV+FLQNP AVQELRADK
Sbjct: 61  LYHTDDVPQDM-----------VERRVEVVGRLKALEEAATPLVSFLQNPNAVQELRADK 120

Query: 121 QYNLQMLNDRYQ-------NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDK 180
           QYNLQMLN+RYQ       +F++P+ QVQ RIWLMHWSLFIFFNHDNGRTQIIDLFNQDK
Sbjct: 121 QYNLQMLNERYQIGPEQIESFATPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDK 180

Query: 181 YLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYD 240
           YLNAIQTNAPHLLRYLAT+FIVNKRRRPQFKDFIKVIQQEQYS+ DPITEFL C+YVNYD
Sbjct: 181 YLNAIQTNAPHLLRYLATSFIVNKRRRPQFKDFIKVIQQEQYSHEDPITEFLACIYVNYD 240

Query: 241 FDGAQKKMRECEEDLDCVLAEKLNLNYEEAERWIVNLVRTSKLDAKLDSKTGTVIMETNE 300
           FD AQKKM+ECEE    VLAEKLNLNY+EAERWIVNL+RTSKLDAK+DS+ GTVIME N 
Sbjct: 241 FDAAQKKMKECEER---VLAEKLNLNYDEAERWIVNLIRTSKLDAKIDSELGTVIMEPNH 300

Query: 301 PDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR 328
           P+V+EQLIDHTK+LSGRTYKLV+QLLEH+Q Q AR
Sbjct: 301 PNVYEQLIDHTKALSGRTYKLVSQLLEHSQGQTAR 321

[Close]

BLAST of Cp4.1LG19g00340 vs. TAIR 10
Match: AT3G57290.1 (eukaryotic translation initiation factor 3E )

HSP 1 Score: 475.3 bits (1222), Expect = 3.9e-134
Identity = 264/445 (59.33%), Postives = 289/445 (64.94%), Query Frame = 0


Query: 4   YDLTPRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKSLYH 63
           YDLTP IAPNLDRHLVFP+ EFLQERQ YPDEQILK+KI+LLN+TNMVDYAMDIHKSLYH
Sbjct: 8   YDLTPLIAPNLDRHLVFPIFEFLQERQLYPDEQILKSKIQLLNQTNMVDYAMDIHKSLYH 67

Query: 64  TDDVPQGMAISWFFILFYMVDRRVEVVARLKALEESAAPLVAFLQNPAAVQELRADKQYN 123
           T+D PQ            MV+RR EVVARLK+LEE+AAPLV+FL NP AVQELRADKQYN
Sbjct: 68  TEDAPQ-----------EMVERRTEVVARLKSLEEAAAPLVSFLLNPNAVQELRADKQYN 127

Query: 124 LQMLNDRYQ--------------------------------------------------- 183
           LQML +RYQ                                                   
Sbjct: 128 LQMLKERYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRTLCSNLERSLSALWGKLA 187

Query: 184 -------------------------NFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIID 243
                                    +FSSP+ QVQ RIWLMHW L+IFFNHDNGRTQIID
Sbjct: 188 SEILMQNWDIALEELNRLKEIIDSKSFSSPLNQVQNRIWLMHWGLYIFFNHDNGRTQIID 247

Query: 244 LFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTC 303
           LFNQDKYLNAIQT+APHLLRYLATAFIVNKRRRPQ K+FIKVIQQE YSY DPI EFL C
Sbjct: 248 LFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQLKEFIKVIQQEHYSYKDPIIEFLAC 307

Query: 304 VYVNYDFDGAQKKMRECEE-----------------------------------DLDC-- 329
           V+VNYDFDGAQKKM+ECEE                                   +  C  
Sbjct: 308 VFVNYDFDGAQKKMKECEEVIVNDPFLGKRVEDGNFSTVPLRDEFLENARLFVFETYCKI 367

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g00340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5Z3	5.5e-133	59.33	Eukaryotic translation initiation factor 3 subunit E OS=Arabidopsis thaliana OX=...	[more]
Q3T102	3.7e-73	39.86	Eukaryotic translation initiation factor 3 subunit E OS=Bos taurus OX=9913 GN=EI...	[more]
P60228	3.7e-73	39.86	Eukaryotic translation initiation factor 3 subunit E OS=Homo sapiens OX=9606 GN=...	[more]
Q4R6G8	3.7e-73	39.86	Eukaryotic translation initiation factor 3 subunit E OS=Macaca fascicularis OX=9...	[more]
P60229	3.7e-73	39.86	Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus OX=10090 GN...	[more]

BLAST of Cp4.1LG19g00340 vs. NCBI nr


Match Name	E-value	Identity	Description
PQM35239.1	1.70e-198	85.54	Eukaryotic translation initiation factor 3 subunit E [Prunus yedoensis var. nudi...	[more]
XP_023518937.1	1.99e-197	69.87	eukaryotic translation initiation factor 3 subunit E [Cucurbita pepo subsp. pepo...	[more]
KAG7027648.1	9.39e-196	69.20	Eukaryotic translation initiation factor 3 subunit E, partial [Cucurbita argyros...	[more]
XP_022966317.1	1.89e-195	69.20	eukaryotic translation initiation factor 3 subunit E [Cucurbita maxima]	[more]
KAA3472103.1	8.05e-193	79.94	Eukaryotic translation initiation factor 3 subunit E [Gossypium australe]	[more]

BLAST of Cp4.1LG19g00340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A314UKL5	8.24e-199	85.54	Eukaryotic translation initiation factor 3 subunit E OS=Prunus yedoensis var. nu...	[more]
A0A6J1HMM9	9.16e-196	69.20	Eukaryotic translation initiation factor 3 subunit E OS=Cucurbita maxima OX=3661...	[more]
A0A5B6VSM5	3.90e-193	79.94	Eukaryotic translation initiation factor 3 subunit E OS=Gossypium australe OX=47...	[more]
A0A6J1EB55	5.82e-192	68.30	Eukaryotic translation initiation factor 3 subunit E OS=Cucurbita moschata OX=36...	[more]
A0A2R6RU47	6.87e-191	81.49	Eukaryotic translation initiation factor 3 subunit E OS=Actinidia chinensis var....	[more]

BLAST of Cp4.1LG19g00340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57290.1	3.9e-134	59.33	eukaryotic translation initiation factor 3E	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 234..254
IPR019010	Eukaryotic translation initiation factor 3 subunit E, N-terminal	SMART	SM01186	eIF3_N_2	coord: 5..135 e-value: 6.5E-51 score: 185.1
IPR019010	Eukaryotic translation initiation factor 3 subunit E, N-terminal	PFAM	PF09440	eIF3_N	coord: 5..132 e-value: 1.5E-37 score: 128.9
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 252..290 e-value: 2.3E-7 score: 31.3
IPR016650	Eukaryotic translation initiation factor 3 subunit E	PIRSF	PIRSF016255	Transl_init_eIF3e	coord: 247..328 e-value: 1.9E-24 score: 84.5 coord: 123..250 e-value: 1.8E-54 score: 183.5 coord: 1..133 e-value: 4.8E-25 score: 86.5
IPR016650	Eukaryotic translation initiation factor 3 subunit E	PANTHER	PTHR10317	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E	coord: 1..132 coord: 133..246 coord: 251..326
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 252..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g00340.1	Cp4.1LG19g00340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0071540	eukaryotic translation initiation factor 3 complex, eIF3e
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
molecular_function	GO:0003743	translation initiation factor activity