Cp4.1LG19g00160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g00160
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	VQ motif-containing protein 31-like
Location	Cp4.1LG19: 110455 .. 110994 (-)
RNA-Seq Expression	Cp4.1LG19g00160
Synteny	Cp4.1LG19g00160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCAAGGCATCATCGTAATGGAGAAGCCAGGCACCCAAACTCCTGTCAAGTGCAAGCCTTTGACGACGTTCGTCCAAACCGACACGACCGCGTTTCGAGAGATCGTGCAACGTCTAACCGGGCCATCGGAAAGCTACACGCTGCCATCGTCGAAGGCCGCGGGATCAAAGAGGCCGACCTCAACATCCAAACTGCATGAAAGGAGGCATTTGACAAGACCAAAGCTACAAATTGTGAAACCATCTCTTTCCCATTTCAAGCCTCCTAGCTTCATTACGAGCCCGATCGGGACACCACCGAGAGCTGATCATCCTAGCTTCATTACGAGCCCAGTCGGGACACCGTCGAAGATCATGTCGAAGCTGTCGATTGGGGACGGGGAGAAGGAGCTGAACAGCATTGAAGAAGAGAAGGCAACGAGAGAGAAGAGATTTTATTTGCATCCATCTCCAAGGTCCATGCATGGCTCTGCCCAACCAGAGTTACTTTCATTATTTCCTTTGGAATCTCCTAAAAAAACAAGTCACAAACCATGA

mRNA sequence

ATGCTGCAAGGCATCATCGTAATGGAGAAGCCAGGCACCCAAACTCCTGTCAAGTGCAAGCCTTTGACGACGTTCGTCCAAACCGACACGACCGCGTTTCGAGAGATCGTGCAACGTCTAACCGGGCCATCGGAAAGCTACACGCTGCCATCGTCGAAGGCCGCGGGATCAAAGAGGCCGACCTCAACATCCAAACTGCATGAAAGGAGGCATTTGACAAGACCAAAGCTACAAATTGTGAAACCATCTCTTTCCCATTTCAAGCCTCCTAGCTTCATTACGAGCCCGATCGGGACACCACCGAGAGCTGATCATCCTAGCTTCATTACGAGCCCAGTCGGGACACCGTCGAAGATCATGTCGAAGCTGTCGATTGGGGACGGGGAGAAGGAGCTGAACAGCATTGAAGAAGAGAAGGCAACGAGAGAGAAGAGATTTTATTTGCATCCATCTCCAAGGTCCATGCATGGCTCTGCCCAACCAGAGTTACTTTCATTATTTCCTTTGGAATCTCCTAAAAAAACAAGTCACAAACCATGA

Coding sequence (CDS)

ATGCTGCAAGGCATCATCGTAATGGAGAAGCCAGGCACCCAAACTCCTGTCAAGTGCAAGCCTTTGACGACGTTCGTCCAAACCGACACGACCGCGTTTCGAGAGATCGTGCAACGTCTAACCGGGCCATCGGAAAGCTACACGCTGCCATCGTCGAAGGCCGCGGGATCAAAGAGGCCGACCTCAACATCCAAACTGCATGAAAGGAGGCATTTGACAAGACCAAAGCTACAAATTGTGAAACCATCTCTTTCCCATTTCAAGCCTCCTAGCTTCATTACGAGCCCGATCGGGACACCACCGAGAGCTGATCATCCTAGCTTCATTACGAGCCCAGTCGGGACACCGTCGAAGATCATGTCGAAGCTGTCGATTGGGGACGGGGAGAAGGAGCTGAACAGCATTGAAGAAGAGAAGGCAACGAGAGAGAAGAGATTTTATTTGCATCCATCTCCAAGGTCCATGCATGGCTCTGCCCAACCAGAGTTACTTTCATTATTTCCTTTGGAATCTCCTAAAAAAACAAGTCACAAACCATGA

Protein sequence

MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP

Homology

[Close]

BLAST of Cp4.1LG19g00160 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.9e-36
Identity = 99/184 (53.80%), Postives = 120/184 (65.22%), Query Frame = 0


Query: 8   MEKPGTQ-TPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSS------KAAGSKRP 67
           M   G+Q     CKP+TTFVQTDT  FREIVQRLTGP+E+    ++      K A  KRP
Sbjct: 1   MNSKGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRP 60

Query: 68  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPP--RADHPSFITSPVGTPSK 127
             TSKLHERR   RPKL+IVKP LS FK       P GT P  ++ + + +TSPVGTPS 
Sbjct: 61  --TSKLHERRQCMRPKLEIVKPPLS-FK-------PTGTTPSSKSGNTNLLTSPVGTPSS 120

Query: 128 IMSKLSIGDGEKE---LNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKT 180
           + S LS+ +GE +    N  EEEKA +E+RFYLHPSPRS  G  +PELL+LFPL SP  +
Sbjct: 121 LFSNLSLIEGEPDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP-NS 173

[Close]

BLAST of Cp4.1LG19g00160 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11
Identity = 62/186 (33.33%), Postives = 89/186 (47.85%), Query Frame = 0


Query: 23  TTFVQTDTTAFREIVQRLTGPSE------------------------SYTLPSSKAAGSK 82
           TTFVQ DT++F+++VQ LTG +E                        S+++P  KA  +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 83  RPTSTS----KLHERRHLTR-----PKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFI 142
           + +S+S    +L+ERR+  +     P   +  P  S F P       I +P   D PS +
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRK---PEILSPSILDFPSLV 176

Query: 143 TSPVG--TPSKIMSKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLF 174
            SPV    P       S      EL +  EEKA +E+ FYLHPSP +     +P LL LF
Sbjct: 177 LSPVTPLIPDPFDRSGSSNQSPNELAA--EEKAMKERGFYLHPSPATTPMDPEPRLLPLF 236

[Close]

BLAST of Cp4.1LG19g00160 vs. ExPASy Swiss-Prot
Match: Q9M8L3 (VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 61/169 (36.09%), Postives = 86/169 (50.89%), Query Frame = 0


Query: 20  KPLTTFVQTDTTAFREIVQRLTGPS---ESYTLPSSKAAGSKRPTSTS----KLHERRHL 79
           +P T FVQ D + FR IVQ+LTG      S +  +  AA  K P +      KLHERR  
Sbjct: 12  EPNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQS 71

Query: 80  TRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIGDGEKEL 139
           ++ K+++    +++   P+   S         H  F+ SPV       +++S     +E 
Sbjct: 72  SK-KMEL---KVNNITNPNDAFSHF-------HRGFLVSPVSHLDPFWARVSPHSAREEH 131

Query: 140 NS---IEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHK 179
           ++    EE+KA  EK FY  PSPRS    A PELL LFPL SP  T+H+
Sbjct: 132 HAQPDKEEQKAIAEKGFYFLPSPRSGSEPA-PELLPLFPLRSPNGTNHR 168

[Close]

BLAST of Cp4.1LG19g00160 vs. ExPASy Swiss-Prot
Match: O23660 (VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09
Identity = 52/173 (30.06%), Postives = 87/173 (50.29%), Query Frame = 0


Query: 23  TTFVQTDTTAFREIVQRLTGPSES------------YTLPSSKAAGSKRPTSTSKLHERR 82
           TTF++TD ++F+++VQ LTG  ++            +++P  KA  +K+ +S+ +L ERR
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERR 95

Query: 83  HLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRAD---HPSFITSPVGTPSKIMSKLSIGD 142
           +  +  L I   + +H  PP  +T  I   P  D       ++ P   P       S  D
Sbjct: 96  NSMKHYLNI---NPTHSGPPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQ--SPSD 155

Query: 143 GEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLF---PLESPKKTSH 178
            +   +  ++E++ +EK FYL PSP +     +P LLSLF   P+ SP  + H
Sbjct: 156 SKPSFDD-DQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPMTPIHSPAPSPH 202

[Close]

BLAST of Cp4.1LG19g00160 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.7e-09
Identity = 66/203 (32.51%), Postives = 86/203 (42.36%), Query Frame = 0


Query: 23  TTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSK---------------RPTSTSKLH 82
           TTFVQ DT+ F+++VQ LTG S   T      A S                + T++ KL+
Sbjct: 49  TTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIKKTNSFKLY 108

Query: 83  ERRH------------------LTRPKLQIVKPSLSHFKPPSFITSP---------IGTP 142
           ERR                       +L     + SH + P F  SP         + +P
Sbjct: 109 ERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRF--SPRNSSSSENILLSP 168

Query: 143 PRADHPSF-ITSPV------GTPSKIMSKLSIGDGEKELNSIEEEKATREKRFYLHPSPR 177
              D P   + SPV        P    S LS+G      NS EE+KA  +K FYLHPSP 
Sbjct: 169 SMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLG------NSSEEDKAIADKGFYLHPSPV 228

[Close]

BLAST of Cp4.1LG19g00160 vs. NCBI nr
Match: KAG6595709.1 (VQ motif-containing protein 31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343 bits (881), Expect = 6.78e-119
Identity = 175/179 (97.77%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP 60
           MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP
Sbjct: 1   MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP 60

Query: 61  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIM 120
           TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSP+GTPPRADHPSFITSPVGTPSKIM
Sbjct: 61  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPVGTPPRADHPSFITSPVGTPSKIM 120

Query: 121 SKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP 179
           SKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESP KT+ KP
Sbjct: 121 SKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPTKTNQKP 179

[Close]

BLAST of Cp4.1LG19g00160 vs. NCBI nr
Match: XP_022925213.1 (VQ motif-containing protein 31-like [Cucurbita moschata])

HSP 1 Score: 341 bits (875), Expect = 5.58e-118
Identity = 175/179 (97.77%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP 60
           MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP
Sbjct: 1   MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP 60

Query: 61  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIM 120
           TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSP+GTPPRADHPSFITSPVGTPSKIM
Sbjct: 61  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPVGTPPRADHPSFITSPVGTPSKIM 120

Query: 121 SKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP 179
           SKLSIG GEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESP KTS KP
Sbjct: 121 SKLSIGVGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPTKTSQKP 179

[Close]

BLAST of Cp4.1LG19g00160 vs. NCBI nr
Match: XP_023518304.1 (VQ motif-containing protein 31 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338 bits (866), Expect = 1.03e-116
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 8   MEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLH 67
           MEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLH
Sbjct: 1   MEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLH 60

Query: 68  ERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIGD 127
           ERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIGD
Sbjct: 61  ERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIGD 120

Query: 128 GEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP 179
           GEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP
Sbjct: 121 GEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP 172

[Close]

BLAST of Cp4.1LG19g00160 vs. NCBI nr
Match: XP_022966462.1 (VQ motif-containing protein 31 [Cucurbita maxima])

HSP 1 Score: 338 bits (866), Expect = 2.39e-116
Identity = 171/179 (95.53%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP 60
           MLQG IVMEKPGTQTPVKCKPLTTFVQTDTTAFRE+VQRLTGPSESYTLPSSKA GSKRP
Sbjct: 18  MLQGTIVMEKPGTQTPVKCKPLTTFVQTDTTAFREVVQRLTGPSESYTLPSSKATGSKRP 77

Query: 61  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIM 120
           TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSP+GTPPRADHPSFITSPVGTP KIM
Sbjct: 78  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPVGTPPRADHPSFITSPVGTPLKIM 137

Query: 121 SKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP 179
           SKLSIGDGEKELNSIEEE+ATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTS  P
Sbjct: 138 SKLSIGDGEKELNSIEEERATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSQNP 196

[Close]

BLAST of Cp4.1LG19g00160 vs. NCBI nr
Match: XP_022149395.1 (VQ motif-containing protein 31 [Momordica charantia])

HSP 1 Score: 231 bits (590), Expect = 9.47e-75
Identity = 127/173 (73.41%), Postives = 142/173 (82.08%), Query Frame = 0


Query: 8   MEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLH 67
           MEK   Q+ V CKPLTTFVQTDTT FRE+VQRLTGPSES+T PS  A  SKRP +TSKLH
Sbjct: 1   MEKAANQSLVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTPPSKAAGSSKRPIATSKLH 60

Query: 68  ERRHLTRPKLQIVKPSLSHF-KPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIG 127
           ERRHLTRPKLQIVKP+ SHF KP S I+S        +HPS  +SP+GTPSKI+SKLSIG
Sbjct: 61  ERRHLTRPKLQIVKPAASHFFKPTSCISS--------EHPSCTSSPLGTPSKILSKLSIG 120

Query: 128 DGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP 179
           DGEKELN++EEEKA +E+RFYLHPSPRSM G AQPELL+LFPLESPK TS KP
Sbjct: 121 DGEKELNAMEEEKAIKERRFYLHPSPRSMPGYAQPELLTLFPLESPK-TSQKP 164

[Close]

BLAST of Cp4.1LG19g00160 vs. ExPASy TrEMBL
Match: A0A6J1EEK6 (VQ motif-containing protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111432521 PE=4 SV=1)

HSP 1 Score: 341 bits (875), Expect = 2.70e-118
Identity = 175/179 (97.77%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP 60
           MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP
Sbjct: 1   MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP 60

Query: 61  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIM 120
           TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSP+GTPPRADHPSFITSPVGTPSKIM
Sbjct: 61  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPVGTPPRADHPSFITSPVGTPSKIM 120

Query: 121 SKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP 179
           SKLSIG GEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESP KTS KP
Sbjct: 121 SKLSIGVGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPTKTSQKP 179

[Close]

BLAST of Cp4.1LG19g00160 vs. ExPASy TrEMBL
Match: A0A6J1HN19 (VQ motif-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111466109 PE=4 SV=1)

HSP 1 Score: 338 bits (866), Expect = 1.16e-116
Identity = 171/179 (95.53%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MLQGIIVMEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRP 60
           MLQG IVMEKPGTQTPVKCKPLTTFVQTDTTAFRE+VQRLTGPSESYTLPSSKA GSKRP
Sbjct: 18  MLQGTIVMEKPGTQTPVKCKPLTTFVQTDTTAFREVVQRLTGPSESYTLPSSKATGSKRP 77

Query: 61  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIM 120
           TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSP+GTPPRADHPSFITSPVGTP KIM
Sbjct: 78  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPVGTPPRADHPSFITSPVGTPLKIM 137

Query: 121 SKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP 179
           SKLSIGDGEKELNSIEEE+ATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTS  P
Sbjct: 138 SKLSIGDGEKELNSIEEERATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSQNP 196

[Close]

BLAST of Cp4.1LG19g00160 vs. ExPASy TrEMBL
Match: A0A6J1D5K7 (VQ motif-containing protein 31 OS=Momordica charantia OX=3673 GN=LOC111017822 PE=4 SV=1)

HSP 1 Score: 231 bits (590), Expect = 4.59e-75
Identity = 127/173 (73.41%), Postives = 142/173 (82.08%), Query Frame = 0


Query: 8   MEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLH 67
           MEK   Q+ V CKPLTTFVQTDTT FRE+VQRLTGPSES+T PS  A  SKRP +TSKLH
Sbjct: 1   MEKAANQSLVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTPPSKAAGSSKRPIATSKLH 60

Query: 68  ERRHLTRPKLQIVKPSLSHF-KPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIG 127
           ERRHLTRPKLQIVKP+ SHF KP S I+S        +HPS  +SP+GTPSKI+SKLSIG
Sbjct: 61  ERRHLTRPKLQIVKPAASHFFKPTSCISS--------EHPSCTSSPLGTPSKILSKLSIG 120

Query: 128 DGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP 179
           DGEKELN++EEEKA +E+RFYLHPSPRSM G AQPELL+LFPLESPK TS KP
Sbjct: 121 DGEKELNAMEEEKAIKERRFYLHPSPRSMPGYAQPELLTLFPLESPK-TSQKP 164

[Close]

BLAST of Cp4.1LG19g00160 vs. ExPASy TrEMBL
Match: A0A0A0KZ05 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G448640 PE=4 SV=1)

HSP 1 Score: 211 bits (537), Expect = 5.31e-67
Identity = 123/172 (71.51%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 8   MEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLH 67
           MEK  +Q+ V CKPLTTFVQTDT  FRE+VQRLTGPSES+T  SSK  GS+RPT+TSKLH
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTT-SSKGFGSRRPTTTSKLH 60

Query: 68  ERRHL-TRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIG 127
           ERR L TRPKLQIVKP  SHFK      + IG     +HPS+ITSP+GTPSKI+SKLSIG
Sbjct: 61  ERRQLITRPKLQIVKPCPSHFK------ATIG-----EHPSYITSPLGTPSKILSKLSIG 120

Query: 128 DGEKE-LNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSH 177
           D EKE LN++EEEKA +E+RFYLHPSPRSM   AQPELLSLFPLESPKK S+
Sbjct: 121 DEEKEELNNMEEEKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSN 160

[Close]

BLAST of Cp4.1LG19g00160 vs. ExPASy TrEMBL
Match: A0A5A7TPA5 (VQ motif-containing protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00210 PE=4 SV=1)

HSP 1 Score: 208 bits (529), Expect = 8.74e-66
Identity = 120/171 (70.18%), Postives = 136/171 (79.53%), Query Frame = 0


Query: 8   MEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLH 67
           MEK G+Q+ V CKPLTTFVQTDT  FRE+VQRLTGPSES+ + SSK  GS+RPT+TSKLH
Sbjct: 1   MEKGGSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHMM-SSKGVGSRRPTTTSKLH 60

Query: 68  ERRHL-TRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIG 127
           ERRHL TRPKLQIVKP  S+FK  +           ++H S+ITSPVGTPSKI+SKLSIG
Sbjct: 61  ERRHLITRPKLQIVKPCPSYFKATT-----------SEHLSYITSPVGTPSKILSKLSIG 120

Query: 128 DGEKE-LNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTS 176
           D EKE LN+ EEEKA +E+RFYLHPSPRSM   AQPELLSLFPLESPK  S
Sbjct: 121 DEEKEELNNKEEEKAIKERRFYLHPSPRSMAVYAQPELLSLFPLESPKNVS 159

[Close]

BLAST of Cp4.1LG19g00160 vs. TAIR 10
Match: AT5G08480.2 (VQ motif-containing protein )

HSP 1 Score: 151.4 bits (381), Expect = 7.0e-37
Identity = 99/184 (53.80%), Postives = 120/184 (65.22%), Query Frame = 0


Query: 8   MEKPGTQ-TPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSS------KAAGSKRP 67
           M   G+Q     CKP+TTFVQTDT  FREIVQRLTGP+E+    ++      K A  KRP
Sbjct: 1   MNSKGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRP 60

Query: 68  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPP--RADHPSFITSPVGTPSK 127
             TSKLHERR   RPKL+IVKP LS FK       P GT P  ++ + + +TSPVGTPS 
Sbjct: 61  --TSKLHERRQCMRPKLEIVKPPLS-FK-------PTGTTPSSKSGNTNLLTSPVGTPSS 120

Query: 128 IMSKLSIGDGEKE---LNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKT 180
           + S LS+ +GE +    N  EEEKA +E+RFYLHPSPRS  G  +PELL+LFPL SP  +
Sbjct: 121 LFSNLSLIEGEPDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP-NS 173

[Close]

BLAST of Cp4.1LG19g00160 vs. TAIR 10
Match: AT5G08480.1 (VQ motif-containing protein )

HSP 1 Score: 118.6 bits (296), Expect = 5.1e-27
Identity = 84/179 (46.93%), Postives = 98/179 (54.75%), Query Frame = 0


Query: 8   MEKPGTQ-TPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSS------KAAGSKRP 67
           M   G+Q     CKP+TTFVQTDT  FREIVQRLTGP+E+    ++      K A  KRP
Sbjct: 1   MNSKGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRP 60

Query: 68  TSTSKLHERRHLTRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIM 127
             TSKLHERR   RPKL+IVKP LS FKP                        G P    
Sbjct: 61  --TSKLHERRQCMRPKLEIVKPPLS-FKPTE----------------------GEPDSCT 120

Query: 128 SKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHKP 180
           + +            EEEKA +E+RFYLHPSPRS  G  +PELL+LFPL SP  +S KP
Sbjct: 121 TNIE-----------EEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP-NSSGKP 142

[Close]

BLAST of Cp4.1LG19g00160 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 72.0 bits (175), Expect = 5.4e-13
Identity = 63/191 (32.98%), Postives = 92/191 (48.17%), Query Frame = 0


Query: 23  TTFVQTDTTAFREIVQRLTGPSE------------------------SYTLPSSKAAGSK 82
           TTFVQ DT++F+++VQ LTG +E                        S+++P  KA  +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 83  RPTSTS----KLHERRHLTR-----PKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFI 142
           + +S+S    +L+ERR+  +     P   +  P  S F P       I +P   D PS +
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRK---PEILSPSILDFPSLV 176

Query: 143 TSPVG--TPSKIMSKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLF 179
            SPV    P       S      EL +  EEKA +E+ FYLHPSP +     +P LL LF
Sbjct: 177 LSPVTPLIPDPFDRSGSSNQSPNELAA--EEKAMKERGFYLHPSPATTPMDPEPRLLPLF 236

[Close]

BLAST of Cp4.1LG19g00160 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12
Identity = 62/186 (33.33%), Postives = 89/186 (47.85%), Query Frame = 0


Query: 23  TTFVQTDTTAFREIVQRLTGPSE------------------------SYTLPSSKAAGSK 82
           TTFVQ DT++F+++VQ LTG +E                        S+++P  KA  +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 83  RPTSTS----KLHERRHLTR-----PKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFI 142
           + +S+S    +L+ERR+  +     P   +  P  S F P       I +P   D PS +
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRK---PEILSPSILDFPSLV 176

Query: 143 TSPVG--TPSKIMSKLSIGDGEKELNSIEEEKATREKRFYLHPSPRSMHGSAQPELLSLF 174
            SPV    P       S      EL +  EEKA +E+ FYLHPSP +     +P LL LF
Sbjct: 177 LSPVTPLIPDPFDRSGSSNQSPNELAA--EEKAMKERGFYLHPSPATTPMDPEPRLLPLF 236

[Close]

BLAST of Cp4.1LG19g00160 vs. TAIR 10
Match: AT1G80450.1 (VQ motif-containing protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11
Identity = 61/169 (36.09%), Postives = 86/169 (50.89%), Query Frame = 0


Query: 20  KPLTTFVQTDTTAFREIVQRLTGPS---ESYTLPSSKAAGSKRPTSTS----KLHERRHL 79
           +P T FVQ D + FR IVQ+LTG      S +  +  AA  K P +      KLHERR  
Sbjct: 12  EPNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQS 71

Query: 80  TRPKLQIVKPSLSHFKPPSFITSPIGTPPRADHPSFITSPVGTPSKIMSKLSIGDGEKEL 139
           ++ K+++    +++   P+   S         H  F+ SPV       +++S     +E 
Sbjct: 72  SK-KMEL---KVNNITNPNDAFSHF-------HRGFLVSPVSHLDPFWARVSPHSAREEH 131

Query: 140 NS---IEEEKATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSHK 179
           ++    EE+KA  EK FY  PSPRS    A PELL LFPL SP  T+H+
Sbjct: 132 HAQPDKEEQKAIAEKGFYFLPSPRSGSEPA-PELLPLFPLRSPNGTNHR 168

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g00160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNP0	9.9e-36	53.80	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]
Q5M750	1.7e-11	33.33	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
Q9M8L3	1.9e-10	36.09	VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1	[more]
O23660	2.1e-09	30.06	VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1	[more]
Q9FHZ3	2.7e-09	32.51	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]

BLAST of Cp4.1LG19g00160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595709.1	6.78e-119	97.77	VQ motif-containing protein 31, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022925213.1	5.58e-118	97.77	VQ motif-containing protein 31-like [Cucurbita moschata]	[more]
XP_023518304.1	1.03e-116	100.00	VQ motif-containing protein 31 [Cucurbita pepo subsp. pepo]	[more]
XP_022966462.1	2.39e-116	95.53	VQ motif-containing protein 31 [Cucurbita maxima]	[more]
XP_022149395.1	9.47e-75	73.41	VQ motif-containing protein 31 [Momordica charantia]	[more]

BLAST of Cp4.1LG19g00160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEK6	2.70e-118	97.77	VQ motif-containing protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC11143252...	[more]
A0A6J1HN19	1.16e-116	95.53	VQ motif-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111466109 PE=4 ...	[more]
A0A6J1D5K7	4.59e-75	73.41	VQ motif-containing protein 31 OS=Momordica charantia OX=3673 GN=LOC111017822 PE...	[more]
A0A0A0KZ05	5.31e-67	71.51	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G448640 PE=4 SV=...	[more]
A0A5A7TPA5	8.74e-66	70.18	VQ motif-containing protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cp4.1LG19g00160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08480.2	7.0e-37	53.80	VQ motif-containing protein	[more]
AT5G08480.1	5.1e-27	46.93	VQ motif-containing protein	[more]
AT1G28280.2	5.4e-13	32.98	VQ motif-containing protein	[more]
AT1G28280.1	1.2e-12	33.33	VQ motif-containing protein	[more]
AT1G80450.1	1.3e-11	36.09	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 23..45 e-value: 2.5E-8 score: 33.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..116
None	No IPR available	PANTHER	PTHR33402:SF22	VQ MOTIF-CONTAINING PROTEIN 31	coord: 8..175
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 8..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g00160.1	Cp4.1LG19g00160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus