Cp4.1LG18g09440 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g09440
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor bHLH137-like
Location	Cp4.1LG18: 8230223 .. 8231813 (-)
RNA-Seq Expression	Cp4.1LG18g09440
Synteny	Cp4.1LG18g09440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTGTGGGAGCTTACATGTTATTATGAACAACTCCCAATTCCTCCCCTCTCCCGACTCCTTTGCGCTCTCAAAAATGAACCCATGTAGCTGGGAGTTGGAAGAAGCGCCACAAATCCCCCACTTTCACCACCTTCTTCCACCTCAAATCCAATCTTCCTCGGTTCAGCAAACTGCCCACCACCACCACCTCCCGCCTCGCATATTACCCACCGCCACCAACCCATTGCCTTCTTCCCACTCTCTCTCTCCGTCCGTATGTACTCTCCCTCTCACTTGTGTGTTTATGGTATGCATTATATATTAAGTGCTTCTAATTTAACCTCTGCTTATTCCCATTACCAGAAGGAGGACCCAAATGAAAGAGGGGGCGACGGCAAGAGGAGAGGCTACAAGCGTGCAAAAGCAGGAGGAGGCCGCAAGAAGCTCAAAACCCAAGACCACCCTCAAGTTCCTCCACCACCAGGGTACATCCACGTAAGAGCCAGGAGGGGTCAGGCCACAGACCGCCACAGCCTTGCAGAAAGGGTAATCGTCATATATATCCAAATTACCTCAATTCCTCTCTTTTAACTCTTAATTAATTACTAATTGGAGTTCCAGGTGAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTCTGCAGACGCTTGTTCCAGGCTGCCACAAGGTTCGTCCGCCTACTTTTATTACCTCTTGCTTTCTTCTACCCAATCACTCTCCTTCATCAAACCATATATATAAATATATATGCCACCATAGGTAACTGGGAAGGCCCTTATGCTGGACGAAATTATTAACTATGTTCAGTCCCTGCAAAGTCAAATTGAGGTACATATATCAAAAATTAAATAAACCCAATTAGCATCATGAATGGGCGCTAATTCATGCATTTTTCTTCACAACTCATTAAATACTTTGCAGCTTCTGTCCATGGAGCTTGCTTCTGTTCACCCCATCCGCTATGACTTTGGAATGGATAATCCAGAGGTATTCATCGGTACGCCAGTCACACAGGTATTGAACGGGAGTGGCATGGTGTCACGTTCAGAGCAGGCAGAATTGGCATATAATATGGCGTCATGCAACACATTTCAGGCCACAGGCGGTGGCGGTGGCGGTGGTGACAGCCCAATCTTAACGGCTGAAAACGGCAGCTTTATCCCAGTGGACATGAATCCATCTCAACTTTTCCTGGATTATGGGAATGCTTCTCTGCAACATCTGTCATGATTTTCTAATTTACTCACAAAACAGAAAGTGAAAGAGATGATAATTAAATTTGAGTGGAGATGAGTGGGTGGTTCTATGTTAACAGAACTCATCTTCATACTGGATACATCACATTACTTATTGTGAATATGTGTAAGTCTTATCCTTGGGTTGGAAGCCAAATTTTGTGGCGCAGGGAAAAGTGTGTATTGTGGGACTACCTTTTATCTGTAATCAATCATATGGGTGGTTTTAAGCAACAATTTCTCCTCTACTTTCTTGTCTTAATTGCCTCTACTTTCTTGTCTTAATTGCCTCTACTCGTGTCCTGATGATATAATAATGGCAAGGGATGGATATAATCTGTAGTGTCTGATGAAT

mRNA sequence

TGTTGTGGGAGCTTACATGTTATTATGAACAACTCCCAATTCCTCCCCTCTCCCGACTCCTTTGCGCTCTCAAAAATGAACCCATGTAGCTGGGAGTTGGAAGAAGCGCCACAAATCCCCCACTTTCACCACCTTCTTCCACCTCAAATCCAATCTTCCTCGGTTCAGCAAACTGCCCACCACCACCACCTCCCGCCTCGCATATTACCCACCGCCACCAACCCATTGCCTTCTTCCCACTCTCTCTCTCCGTCCGTATGTACTCTCCCTCTCACTTGTGTGTTTATGGTATGCATTATATATTAAGTGCTTCTAATTTAACCTCTGCTTATTCCCATTACCAGAAGGAGGACCCAAATGAAAGAGGGGGCGACGGCAAGAGGAGAGGCTACAAGCGTGCAAAAGCAGGAGGAGGCCGCAAGAAGCTCAAAACCCAAGACCACCCTCAAGTTCCTCCACCACCAGGGTACATCCACGTAAGAGCCAGGAGGGGTCAGGCCACAGACCGCCACAGCCTTGCAGAAAGGGTGAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTCTGCAGACGCTTGTTCCAGGCTGCCACAAGGTAACTGGGAAGGCCCTTATGCTGGACGAAATTATTAACTATGTTCAGTCCCTGCAAAGTCAAATTGAGCTTCTGTCCATGGAGCTTGCTTCTGTTCACCCCATCCGCTATGACTTTGGAATGGATAATCCAGAGGTATTCATCGGTACGCCAGTCACACAGGTATTGAACGGGAGTGGCATGGTGTCACGTTCAGAGCAGGCAGAATTGGCATATAATATGGCGTCATGCAACACATTTCAGGCCACAGGCGGTGGCGGTGGCGGTGGTGACAGCCCAATCTTAACGGCTGAAAACGGCAGCTTTATCCCAGTGGACATGAATCCATCTCAACTTTTCCTGGATTATGGGAATGCTTCTCTGCAACATCTGTCATGATTTTCTAATTTACTCACAAAACAGAAAGTGAAAGAGATGATAATTAAATTTGAGTGGAGATGAGTGGGTGGTTCTATGTTAACAGAACTCATCTTCATACTGGATACATCACATTACTTATTGTGAATATGTGTAAGTCTTATCCTTGGGTTGGAAGCCAAATTTTGTGGCGCAGGGAAAAGTGTGTATTGTGGGACTACCTTTTATCTGTAATCAATCATATGGGTGGTTTTAAGCAACAATTTCTCCTCTACTTTCTTGTCTTAATTGCCTCTACTTTCTTGTCTTAATTGCCTCTACTCGTGTCCTGATGATATAATAATGGCAAGGGATGGATATAATCTGTAGTGTCTGATGAAT

Coding sequence (CDS)

ATGTACTCTCCCTCTCACTTGTGTGTTTATGGTATGCATTATATATTAAGTGCTTCTAATTTAACCTCTGCTTATTCCCATTACCAGAAGGAGGACCCAAATGAAAGAGGGGGCGACGGCAAGAGGAGAGGCTACAAGCGTGCAAAAGCAGGAGGAGGCCGCAAGAAGCTCAAAACCCAAGACCACCCTCAAGTTCCTCCACCACCAGGGTACATCCACGTAAGAGCCAGGAGGGGTCAGGCCACAGACCGCCACAGCCTTGCAGAAAGGGTGAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTCTGCAGACGCTTGTTCCAGGCTGCCACAAGGTAACTGGGAAGGCCCTTATGCTGGACGAAATTATTAACTATGTTCAGTCCCTGCAAAGTCAAATTGAGCTTCTGTCCATGGAGCTTGCTTCTGTTCACCCCATCCGCTATGACTTTGGAATGGATAATCCAGAGGTATTCATCGGTACGCCAGTCACACAGGTATTGAACGGGAGTGGCATGGTGTCACGTTCAGAGCAGGCAGAATTGGCATATAATATGGCGTCATGCAACACATTTCAGGCCACAGGCGGTGGCGGTGGCGGTGGTGACAGCCCAATCTTAACGGCTGAAAACGGCAGCTTTATCCCAGTGGACATGAATCCATCTCAACTTTTCCTGGATTATGGGAATGCTTCTCTGCAACATCTGTCATGA

Protein sequence

MYSPSHLCVYGMHYILSASNLTSAYSHYQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQATGGGGGGGDSPILTAENGSFIPVDMNPSQLFLDYGNASLQHLS

Homology

[Close]

BLAST of Cp4.1LG18g09440 vs. ExPASy Swiss-Prot
Match: Q93W88 (Transcription factor bHLH137 OS=Arabidopsis thaliana OX=3702 GN=BHLH137 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 78/128 (60.94%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 33  PNERGGDGKRRGYKRAKAGG------GRKKLKTQDHPQVPPPPGYIHVRARRGQATDRHS 92
           P+     GK RG K   +        GRK  K +   +  PP  YIHVRARRGQATD HS
Sbjct: 89  PSAITNTGKTRGRKARNSNNSKEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHS 148

Query: 93  LAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHP 152
           LAERVRR+KIS+RM+ LQ LVPGC KVTGKALMLDEIINYVQ+LQ+Q+E LSM+L S+ P
Sbjct: 149 LAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISP 208

Query: 153 IRYDFGMD 155
           + YDFG D
Sbjct: 209 VVYDFGSD 216

[Close]

BLAST of Cp4.1LG18g09440 vs. ExPASy Swiss-Prot
Match: Q9CAA9 (Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 9.7e-31
Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 20  NLTSAYSH--YQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQV--PPPPGYIHVR 79
           N  +A SH   Q E+  +  GD KR   +   + G +     Q   Q   PP  GYIHVR
Sbjct: 245 NSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVR 304

Query: 80  ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 139
           ARRGQAT+ HSLAERVRR+KIS+RMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ Q+E
Sbjct: 305 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 364

Query: 140 LLSMELASVHPIRYDFGMD 155
            LSM+LA+V+P + DF ++
Sbjct: 365 FLSMKLATVNP-QMDFNLE 382

[Close]

BLAST of Cp4.1LG18g09440 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-30
Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 35  ERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVRARRGQATDRHSLAERVRRQ 94
           E+GG  +R      +  G  +  K+ +     PP  YIHVRARRGQATD HSLAERVRR+
Sbjct: 262 EKGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRRE 321

Query: 95  KISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRYDFGMD 154
           KI +RMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ Q+E LSM+L+SV+  R DF +D
Sbjct: 322 KIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381

[Close]

BLAST of Cp4.1LG18g09440 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.1e-29
Identity = 82/138 (59.42%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 17  SASNLTSAYSHYQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVRA 76
           S  N  SA S   KE   +   D KR   K+++  G + K        + P   YIHVRA
Sbjct: 211 SKQNSPSAVSS-SKEIEEKEDSDPKR--CKKSEENGDKTK-------SIDPYKDYIHVRA 270

Query: 77  RRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIEL 136
           RRGQATD HSLAERVRR+KIS+RMK+LQ LVPGC+KVTGKALMLDEIINYVQSLQ Q+E 
Sbjct: 271 RRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEF 330

Query: 137 LSMELASVHPIRYDFGMD 155
           LSM+L+SV+  R DF MD
Sbjct: 331 LSMKLSSVN-TRLDFNMD 337

[Close]

BLAST of Cp4.1LG18g09440 vs. ExPASy Swiss-Prot
Match: Q8GY61 (Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 71  YIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSL 130
           YIHVRARRGQATD HS+AERVRR+KIS+RMK LQ LVPGC K+TGKA MLDEIINYVQSL
Sbjct: 169 YIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSL 228

Query: 131 QSQIELLSMELASVHPIRYDFGMDN--PEVFIGTPVTQV 168
           Q QIE LSM+LA V+P R DF MD+   +    TP+T V
Sbjct: 229 QRQIEFLSMKLAIVNP-RPDFDMDDIFAKEVASTPMTVV 266

[Close]

BLAST of Cp4.1LG18g09440 vs. NCBI nr
Match: XP_023516576.1 (transcription factor bHLH74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410 bits (1053), Expect = 1.87e-142
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 30  KEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVRARRGQATDRHSLAE 89
           KEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVRARRGQATDRHSLAE
Sbjct: 78  KEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVRARRGQATDRHSLAE 137

Query: 90  RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRY 149
           RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRY
Sbjct: 138 RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRY 197

Query: 150 DFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQATGGGGGGGDSPILTA 209
           DFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQATGGGGGGGDSPILTA
Sbjct: 198 DFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQATGGGGGGGDSPILTA 257

Query: 210 ENGSFIPVDMNPSQLFLDYGNASLQHLS 237
           ENGSFIPVDMNPSQLFLDYGNASLQHLS
Sbjct: 258 ENGSFIPVDMNPSQLFLDYGNASLQHLS 285

[Close]

BLAST of Cp4.1LG18g09440 vs. NCBI nr
Match: XP_022987143.1 (transcription factor bHLH137-like [Cucurbita maxima])

HSP 1 Score: 400 bits (1027), Expect = 1.58e-138
Identity = 204/208 (98.08%), Postives = 204/208 (98.08%), Query Frame = 0


Query: 30  KEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVRARRGQATDRHSLAE 89
           KEDPNERGGDGKRR YK AKAGGGRKKLKTQDHPQV PPPGYIHVRARRGQATDRHSLAE
Sbjct: 76  KEDPNERGGDGKRRAYKPAKAGGGRKKLKTQDHPQVSPPPGYIHVRARRGQATDRHSLAE 135

Query: 90  RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRY 149
           RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRY
Sbjct: 136 RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRY 195

Query: 150 DFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQATGGGGGGGDSPILTA 209
           DFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQATGGGGGGGDSPILTA
Sbjct: 196 DFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQATGGGGGGGDSPILTA 255

Query: 210 ENGSFIPVDMNPSQLFLDYGNASLQHLS 237
           ENGSFIPVDMNPSQLFLDYGNASL HLS
Sbjct: 256 ENGSFIPVDMNPSQLFLDYGNASLHHLS 283

[Close]

BLAST of Cp4.1LG18g09440 vs. NCBI nr
Match: XP_022921620.1 (transcription factor bHLH137-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 397 bits (1020), Expect = 1.84e-137
Identity = 207/222 (93.24%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 17  SASNLTSAYS-HYQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVR 76
           + ++L S++S    KEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQV PPPGYIHVR
Sbjct: 64  TTNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVSPPPGYIHVR 123

Query: 77  ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 136
           ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE
Sbjct: 124 ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 183

Query: 137 LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT 196
           LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT
Sbjct: 184 LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT 243

Query: 197 GGGGGGGDSPILTAENGSFIPVDMNPSQLFLDYGNASLQHLS 237
           GGGGG  DSPILTAENGSFIPVDMNPSQ+FLDYGNASLQHLS
Sbjct: 244 GGGGG--DSPILTAENGSFIPVDMNPSQVFLDYGNASLQHLS 283

[Close]

BLAST of Cp4.1LG18g09440 vs. NCBI nr
Match: XP_022921619.1 (transcription factor bHLH74-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 397 bits (1020), Expect = 2.81e-137
Identity = 207/222 (93.24%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 17  SASNLTSAYS-HYQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVR 76
           + ++L S++S    KEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQV PPPGYIHVR
Sbjct: 76  TTNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVSPPPGYIHVR 135

Query: 77  ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 136
           ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE
Sbjct: 136 ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 195

Query: 137 LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT 196
           LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT
Sbjct: 196 LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT 255

Query: 197 GGGGGGGDSPILTAENGSFIPVDMNPSQLFLDYGNASLQHLS 237
           GGGGG  DSPILTAENGSFIPVDMNPSQ+FLDYGNASLQHLS
Sbjct: 256 GGGGG--DSPILTAENGSFIPVDMNPSQVFLDYGNASLQHLS 295

[Close]

BLAST of Cp4.1LG18g09440 vs. NCBI nr
Match: KAG6589349.1 (Transcription factor basic helix-loop-helix 137, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 395 bits (1016), Expect = 4.10e-137
Identity = 206/222 (92.79%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 17  SASNLTSAYS-HYQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVR 76
           + ++L S++S    KEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQV PPPGYIHVR
Sbjct: 47  ATNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVSPPPGYIHVR 106

Query: 77  ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 136
           ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE
Sbjct: 107 ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 166

Query: 137 LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT 196
           LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYN+ASCNTFQAT
Sbjct: 167 LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNIASCNTFQAT 226

Query: 197 GGGGGGGDSPILTAENGSFIPVDMNPSQLFLDYGNASLQHLS 237
           GGGGG  DSPILTAENGSFIPVDMNPSQ+FLDYGNASLQHLS
Sbjct: 227 GGGGG--DSPILTAENGSFIPVDMNPSQVFLDYGNASLQHLS 266

[Close]

BLAST of Cp4.1LG18g09440 vs. ExPASy TrEMBL
Match: A0A6J1JIL6 (transcription factor bHLH137-like OS=Cucurbita maxima OX=3661 GN=LOC111484783 PE=4 SV=1)

HSP 1 Score: 400 bits (1027), Expect = 7.66e-139
Identity = 204/208 (98.08%), Postives = 204/208 (98.08%), Query Frame = 0


Query: 30  KEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVRARRGQATDRHSLAE 89
           KEDPNERGGDGKRR YK AKAGGGRKKLKTQDHPQV PPPGYIHVRARRGQATDRHSLAE
Sbjct: 76  KEDPNERGGDGKRRAYKPAKAGGGRKKLKTQDHPQVSPPPGYIHVRARRGQATDRHSLAE 135

Query: 90  RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRY 149
           RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRY
Sbjct: 136 RVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHPIRY 195

Query: 150 DFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQATGGGGGGGDSPILTA 209
           DFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQATGGGGGGGDSPILTA
Sbjct: 196 DFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQATGGGGGGGDSPILTA 255

Query: 210 ENGSFIPVDMNPSQLFLDYGNASLQHLS 237
           ENGSFIPVDMNPSQLFLDYGNASL HLS
Sbjct: 256 ENGSFIPVDMNPSQLFLDYGNASLHHLS 283

[Close]

BLAST of Cp4.1LG18g09440 vs. ExPASy TrEMBL
Match: A0A6J1E6B0 (transcription factor bHLH137-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429828 PE=4 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 8.92e-138
Identity = 207/222 (93.24%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 17  SASNLTSAYS-HYQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVR 76
           + ++L S++S    KEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQV PPPGYIHVR
Sbjct: 64  TTNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVSPPPGYIHVR 123

Query: 77  ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 136
           ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE
Sbjct: 124 ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 183

Query: 137 LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT 196
           LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT
Sbjct: 184 LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT 243

Query: 197 GGGGGGGDSPILTAENGSFIPVDMNPSQLFLDYGNASLQHLS 237
           GGGGG  DSPILTAENGSFIPVDMNPSQ+FLDYGNASLQHLS
Sbjct: 244 GGGGG--DSPILTAENGSFIPVDMNPSQVFLDYGNASLQHLS 283

[Close]

BLAST of Cp4.1LG18g09440 vs. ExPASy TrEMBL
Match: A0A6J1E106 (transcription factor bHLH74-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429828 PE=4 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 1.36e-137
Identity = 207/222 (93.24%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 17  SASNLTSAYS-HYQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVPPPPGYIHVR 76
           + ++L S++S    KEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQV PPPGYIHVR
Sbjct: 76  TTNSLPSSHSLSPSKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQVSPPPGYIHVR 135

Query: 77  ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 136
           ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE
Sbjct: 136 ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 195

Query: 137 LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT 196
           LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT
Sbjct: 196 LLSMELASVHPIRYDFGMDNPEVFIGTPVTQVLNGSGMVSRSEQAELAYNMASCNTFQAT 255

Query: 197 GGGGGGGDSPILTAENGSFIPVDMNPSQLFLDYGNASLQHLS 237
           GGGGG  DSPILTAENGSFIPVDMNPSQ+FLDYGNASLQHLS
Sbjct: 256 GGGGG--DSPILTAENGSFIPVDMNPSQVFLDYGNASLQHLS 295

[Close]

BLAST of Cp4.1LG18g09440 vs. ExPASy TrEMBL
Match: A0A0A0LTX6 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G000700 PE=4 SV=1)

HSP 1 Score: 250 bits (639), Expect = 5.39e-80
Identity = 155/229 (67.69%), Postives = 175/229 (76.42%), Query Frame = 0


Query: 21  LTSAYSH---YQKEDPN-ERGGDGKRRGYKRAKAGG--GRKK---LKTQDHPQVPPPPGY 80
           + S++SH    ++EDPN  +GG+ KRR Y RAKAGG  G KK   +KTQ  P        
Sbjct: 60  MPSSHSHPPSAEEEDPNGSKGGECKRRCYNRAKAGGRSGCKKKMMIKTQHDPAD------ 119

Query: 81  IHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQ 140
            HVRARRGQATD HSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQ
Sbjct: 120 -HVRARRGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQ 179

Query: 141 SQIELLSMELASVHPIRYDFGMDNPEVF-IGTPVTQVLNGSGMVSRSEQAELAYN-MASC 200
           +Q+E LSM+LAS+ P+ +DFGMD PEV  +GTP +++LNG+GMVS SE AELAYN MA  
Sbjct: 180 NQVEFLSMKLASLDPVLHDFGMDFPEVLLVGTPASEILNGNGMVSHSEHAELAYNNMAPI 239

Query: 201 -NTFQATGGGGGGGDSPILTAENGSFIPVDMNPSQLFLDYGNASLQHLS 237
            NTFQATGGGGGG  SPILT  N SFI    NPS LFLD+GN S  HLS
Sbjct: 240 YNTFQATGGGGGG--SPILTPGNSSFI----NPSPLFLDHGNTSQLHLS 275

[Close]

BLAST of Cp4.1LG18g09440 vs. ExPASy TrEMBL
Match: A0A5A7URF9 (Transcription factor bHLH137-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00190 PE=4 SV=1)

HSP 1 Score: 246 bits (628), Expect = 2.58e-78
Identity = 155/230 (67.39%), Postives = 175/230 (76.09%), Query Frame = 0


Query: 21  LTSAYSH---YQKEDPN-ERGGDGKRRG-YKRAKAG---GGRKKL--KTQDHPQVPPPPG 80
           + S++SH    ++ED N  +GG+ KRR  Y RAKAG   G +KK+  KTQ  P       
Sbjct: 60  MPSSHSHPPSAEEEDQNGSKGGECKRRRCYNRAKAGERSGCKKKMTIKTQHDPAD----- 119

Query: 81  YIHVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSL 140
             HVRARRGQATD HSLAERVRRQKISQRMKVLQTLVPGCHKVTGKA MLDEIINYVQSL
Sbjct: 120 --HVRARRGQATDSHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKASMLDEIINYVQSL 179

Query: 141 QSQIELLSMELASVHPIRYDFGMDNPEVFI-GTPVTQVLNGSGMVSRSEQAELAYN-MAS 200
           Q+Q+E LSM+LAS+HP+ YDFGMD PEV I GTP +++LNG+GMVS SEQAELAYN MA 
Sbjct: 180 QNQVEFLSMKLASLHPVLYDFGMDFPEVLIVGTPASEILNGNGMVSHSEQAELAYNNMAP 239

Query: 201 C-NTFQATGGGGGGGDSPILTAENGSFIPVDMNPSQLFLDYGNASLQHLS 237
             NTFQATG GGGG  SPILT  N SFI    NPS LF+D+GN SL HLS
Sbjct: 240 IYNTFQATGSGGGG--SPILTPGNSSFI----NPSPLFIDHGNTSLLHLS 276

[Close]

BLAST of Cp4.1LG18g09440 vs. TAIR 10
Match: AT5G50915.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 9.6e-34
Identity = 78/128 (60.94%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 33  PNERGGDGKRRGYKRAKAGG------GRKKLKTQDHPQVPPPPGYIHVRARRGQATDRHS 92
           P+     GK RG K   +        GRK  K +   +  PP  YIHVRARRGQATD HS
Sbjct: 89  PSAITNTGKTRGRKARNSNNSKEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHS 148

Query: 93  LAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHP 152
           LAERVRR+KIS+RM+ LQ LVPGC KVTGKALMLDEIINYVQ+LQ+Q+E LSM+L S+ P
Sbjct: 149 LAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISP 208

Query: 153 IRYDFGMD 155
           + YDFG D
Sbjct: 209 VVYDFGSD 216

[Close]

BLAST of Cp4.1LG18g09440 vs. TAIR 10
Match: AT5G50915.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 9.6e-34
Identity = 78/128 (60.94%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 33  PNERGGDGKRRGYKRAKAGG------GRKKLKTQDHPQVPPPPGYIHVRARRGQATDRHS 92
           P+     GK RG K   +        GRK  K +   +  PP  YIHVRARRGQATD HS
Sbjct: 89  PSAITNTGKTRGRKARNSNNSKEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHS 148

Query: 93  LAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIELLSMELASVHP 152
           LAERVRR+KIS+RM+ LQ LVPGC KVTGKALMLDEIINYVQ+LQ+Q+E LSM+L S+ P
Sbjct: 149 LAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISP 208

Query: 153 IRYDFGMD 155
           + YDFG D
Sbjct: 209 VVYDFGSD 216

[Close]

BLAST of Cp4.1LG18g09440 vs. TAIR 10
Match: AT1G68920.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 5.3e-32
Identity = 80/142 (56.34%), Postives = 99/142 (69.72%), Query Frame = 0


Query: 17  SASNLTSAYSH--YQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQV--PPPPGYI 76
           +  N  +A SH   Q E+  +  GD KR   +   + G +     Q   Q   PP  GYI
Sbjct: 241 NGQNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYI 300

Query: 77  HVRARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQS 136
           HVRARRGQAT+ HSLAERVRR+KIS+RMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ 
Sbjct: 301 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQR 360

Query: 137 QIELLSMELASVHPIRYDFGMD 155
           Q+E LSM+LA+V+P + DF ++
Sbjct: 361 QVEFLSMKLATVNP-QMDFNLE 381

[Close]

BLAST of Cp4.1LG18g09440 vs. TAIR 10
Match: AT1G68920.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 6.9e-32
Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 20  NLTSAYSH--YQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQV--PPPPGYIHVR 79
           N  +A SH   Q E+  +  GD KR   +   + G +     Q   Q   PP  GYIHVR
Sbjct: 245 NSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVR 304

Query: 80  ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 139
           ARRGQAT+ HSLAERVRR+KIS+RMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ Q+E
Sbjct: 305 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 364

Query: 140 LLSMELASVHPIRYDFGMD 155
            LSM+LA+V+P + DF ++
Sbjct: 365 FLSMKLATVNP-QMDFNLE 382

[Close]

BLAST of Cp4.1LG18g09440 vs. TAIR 10
Match: AT1G68920.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 6.9e-32
Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 20  NLTSAYSH--YQKEDPNERGGDGKRRGYKRAKAGGGRKKLKTQDHPQV--PPPPGYIHVR 79
           N  +A SH   Q E+  +  GD KR   +   + G +     Q   Q   PP  GYIHVR
Sbjct: 245 NSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVR 304

Query: 80  ARRGQATDRHSLAERVRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQSQIE 139
           ARRGQAT+ HSLAERVRR+KIS+RMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ Q+E
Sbjct: 305 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 364

Query: 140 LLSMELASVHPIRYDFGMD 155
            LSM+LA+V+P + DF ++
Sbjct: 365 FLSMKLATVNP-QMDFNLE 382

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g09440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93W88	1.4e-32	60.94	Transcription factor bHLH137 OS=Arabidopsis thaliana OX=3702 GN=BHLH137 PE=1 SV=...	[more]
Q9CAA9	9.7e-31	57.55	Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1	[more]
Q9FJL4	1.7e-30	61.67	Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1	[more]
Q9SRT2	4.1e-29	59.42	Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1	[more]
Q8GY61	1.2e-28	71.72	Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1	[more]

BLAST of Cp4.1LG18g09440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516576.1	1.87e-142	100.00	transcription factor bHLH74-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987143.1	1.58e-138	98.08	transcription factor bHLH137-like [Cucurbita maxima]	[more]
XP_022921620.1	1.84e-137	93.24	transcription factor bHLH137-like isoform X2 [Cucurbita moschata]	[more]
XP_022921619.1	2.81e-137	93.24	transcription factor bHLH74-like isoform X1 [Cucurbita moschata]	[more]
KAG6589349.1	4.10e-137	92.79	Transcription factor basic helix-loop-helix 137, partial [Cucurbita argyrosperma...	[more]

BLAST of Cp4.1LG18g09440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JIL6	7.66e-139	98.08	transcription factor bHLH137-like OS=Cucurbita maxima OX=3661 GN=LOC111484783 PE...	[more]
A0A6J1E6B0	8.92e-138	93.24	transcription factor bHLH137-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1E106	1.36e-137	93.24	transcription factor bHLH74-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A0A0LTX6	5.39e-80	67.69	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G000700 PE=4 S...	[more]
A0A5A7URF9	2.58e-78	67.39	Transcription factor bHLH137-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Cp4.1LG18g09440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50915.1	9.6e-34	60.94	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G50915.2	9.6e-34	60.94	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.3	5.3e-32	56.34	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.1	6.9e-32	57.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.2	6.9e-32	57.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 86..136 e-value: 2.7E-9 score: 46.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 84..131 e-value: 6.6E-7 score: 29.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 80..130 score: 15.243355
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 77..147 e-value: 1.2E-13 score: 52.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 78..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..46
None	No IPR available	PANTHER	PTHR12565:SF327	BHLH-TRANSCRIPTION FACTOR	coord: 29..189
None	No IPR available	CDD	cd18919	bHLH_AtBPE_like	coord: 70..154 e-value: 1.7737E-54 score: 168.004
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 29..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g09440.1	Cp4.1LG18g09440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity