Cp4.1LG18g09060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g09060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ABC transporter F family member 4-like
Location	Cp4.1LG18: 8201493 .. 8202461 (+)
RNA-Seq Expression	Cp4.1LG18g09060
Synteny	Cp4.1LG18g09060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGTGGAAACTCCAAGCTTACTCCGGAAGGAGAGTCGATTCTCCCCATGATTCGCCCACTTCTTTTCCGCACTAAATTTGCGGAGTTCAGGAAACGTAAGAATGGAACGCATCTTAGAGAGACAGCGCTGTCAAAGAAAGTGCTTCTCAAAGAGGGAGAAATAGAAGAAGAGAACTCCATACTTCCTGTTCATAACAGGAACAGCATCTATGGTTCCCATGACGGCAAAACAATTTGTTTGCACACCAAACAGGAGAATCATAAGGATGAACATGATTCACCCAATGCAAACCATCTCTTGGAACAACACAAACCCAATCACAATGGCAGTCGGGTTGAATTGAAAGAAAATAAAACCATGAACAACCAACATAAGGCAGTGGAAGAAGGAGATGATGAAAACAAGGAAGAAGGAGAAGAGGGTAGGCCTGAGGAGGAAGACAATCGATGCCTCATCTGTCCTGGATCACCCAGTTTCAGAGTTTATTTTGTTGAACAAACACCAAATGAGAAACAAAATGGTAAGTAGGCTCAAAACAGAAGTTTCAACCCAAACAACCAAACCATTATGTGTATATTATGACCAACACAGTAGCAACATGTTTTACAGTTGAAATGAATGATGATGGAGACATGGAAGATGCCTCACTGAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCAGCAGTAGTACAAAATCTAACGAGGTGGGTCCACAGGATCATGTTTAGAAGATTTGGGATTTTTGTTATGTTGCTCTCATGAATCTTACACATACAGGGCCAGGAGAAGAAGACGACAAAGAAAGGAATAAAAGGGACGACTTTGAACAGAGCGGGGAGTAGAAAAAGACCAGTTGGAGTTGGTTTAAAGAGTCTGTTGAACGTTAATAATTGTTGCTATCATTTAAGTTGTACCGGCAATGACAGCGGCAATCATCTAGCTAGAAAAGCTGAATGTTAA

mRNA sequence

ATGGGGTGTGGAAACTCCAAGCTTACTCCGGAAGGAGAGTCGATTCTCCCCATGATTCGCCCACTTCTTTTCCGCACTAAATTTGCGGAGTTCAGGAAACGTAAGAATGGAACGCATCTTAGAGAGACAGCGCTGTCAAAGAAAGTGCTTCTCAAAGAGGGAGAAATAGAAGAAGAGAACTCCATACTTCCTGTTCATAACAGGAACAGCATCTATGGTTCCCATGACGGCAAAACAATTTGTTTGCACACCAAACAGGAGAATCATAAGGATGAACATGATTCACCCAATGCAAACCATCTCTTGGAACAACACAAACCCAATCACAATGGCAGTCGGGTTGAATTGAAAGAAAATAAAACCATGAACAACCAACATAAGGCAGTGGAAGAAGGAGATGATGAAAACAAGGAAGAAGGAGAAGAGGGTAGGCCTGAGGAGGAAGACAATCGATGCCTCATCTGTCCTGGATCACCCAGTTTCAGAGTTTATTTTGTTGAACAAACACCAAATGAGAAACAAAATGTTGAAATGAATGATGATGGAGACATGGAAGATGCCTCACTGAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCAGCAGTAGTACAAAATCTAACGAGGGCCAGGAGAAGAAGACGACAAAGAAAGGAATAAAAGGGACGACTTTGAACAGAGCGGGGAGTAGAAAAAGACCAGTTGGAGTTGGTTTAAAGAGTCTGTTGAACGTTAATAATTGTTGCTATCATTTAAGTTGTACCGGCAATGACAGCGGCAATCATCTAGCTAGAAAAGCTGAATGTTAA

Coding sequence (CDS)

ATGGGGTGTGGAAACTCCAAGCTTACTCCGGAAGGAGAGTCGATTCTCCCCATGATTCGCCCACTTCTTTTCCGCACTAAATTTGCGGAGTTCAGGAAACGTAAGAATGGAACGCATCTTAGAGAGACAGCGCTGTCAAAGAAAGTGCTTCTCAAAGAGGGAGAAATAGAAGAAGAGAACTCCATACTTCCTGTTCATAACAGGAACAGCATCTATGGTTCCCATGACGGCAAAACAATTTGTTTGCACACCAAACAGGAGAATCATAAGGATGAACATGATTCACCCAATGCAAACCATCTCTTGGAACAACACAAACCCAATCACAATGGCAGTCGGGTTGAATTGAAAGAAAATAAAACCATGAACAACCAACATAAGGCAGTGGAAGAAGGAGATGATGAAAACAAGGAAGAAGGAGAAGAGGGTAGGCCTGAGGAGGAAGACAATCGATGCCTCATCTGTCCTGGATCACCCAGTTTCAGAGTTTATTTTGTTGAACAAACACCAAATGAGAAACAAAATGTTGAAATGAATGATGATGGAGACATGGAAGATGCCTCACTGAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCAGCAGTAGTACAAAATCTAACGAGGGCCAGGAGAAGAAGACGACAAAGAAAGGAATAAAAGGGACGACTTTGAACAGAGCGGGGAGTAGAAAAAGACCAGTTGGAGTTGGTTTAAAGAGTCTGTTGAACGTTAATAATTGTTGCTATCATTTAAGTTGTACCGGCAATGACAGCGGCAATCATCTAGCTAGAAAAGCTGAATGTTAA

Protein sequence

MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEENSILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENKTMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQNVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDSGNHLARKAEC

Homology

[Close]

BLAST of Cp4.1LG18g09060 vs. NCBI nr
Match: XP_023516922.1 (uncharacterized protein LOC111780685 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525 bits (1352), Expect = 9.68e-188
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK 120
           SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND 180
           TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND
Sbjct: 121 TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND 180

Query: 181 DGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGVGLKS 240
           DGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGVGLKS
Sbjct: 181 DGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGVGLKS 240

Query: 241 LLNVNNCCYHLSCTGNDSGNHLARKAEC 268
           LLNVNNCCYHLSCTGNDSGNHLARKAEC
Sbjct: 241 LLNVNNCCYHLSCTGNDSGNHLARKAEC 268

[Close]

BLAST of Cp4.1LG18g09060 vs. NCBI nr
Match: KAG7023042.1 (hypothetical protein SDJN02_14064, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 502 bits (1292), Expect = 1.75e-178
Identity = 261/275 (94.91%), Postives = 265/275 (96.36%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK 120
           SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNG+RVELKENK
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGTRVELKENK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQNV---- 180
           TMNNQHKAVEEGDDENKEEGEEGRP++EDNRCLICPGSPSFRVYFVEQTPNEKQNV    
Sbjct: 121 TMNNQHKAVEEGDDENKEEGEEGRPDDEDNRCLICPGSPSFRVYFVEQTPNEKQNVATCF 180

Query: 181 --EMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPV 240
             EMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKT KKG +GTTLNRAGSRKRPV
Sbjct: 181 TVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTIKKGKEGTTLNRAGSRKRPV 240

Query: 241 GV-GLKSLLNVNNCCYHLSCTGNDSGNHLARKAEC 268
           GV GLKSLLNVNNCCYHLSCTGND GNHLARKAEC
Sbjct: 241 GVVGLKSLLNVNNCCYHLSCTGNDRGNHLARKAEC 275

[Close]

BLAST of Cp4.1LG18g09060 vs. NCBI nr
Match: XP_022921428.1 (uncharacterized protein LOC111429712 [Cucurbita moschata])

HSP 1 Score: 494 bits (1273), Expect = 1.07e-175
Identity = 254/268 (94.78%), Postives = 258/268 (96.27%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK 120
           SILPVHNRNSIYGSHDGKTICLHTKQENH DEHDSPNANHLLEQHKPN NG+RVELKENK
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHMDEHDSPNANHLLEQHKPNDNGTRVELKENK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND 180
           TMNNQ  AVEEGDDENKEEGEEGRP+ EDNRCLICPGSPSFRVYFVEQTPN+KQNVEMND
Sbjct: 121 TMNNQRTAVEEGDDENKEEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNDKQNVEMND 180

Query: 181 DGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGVGLKS 240
           DGDMEDASLKKSPSRDSVESSSSTKSNEGQE KT KKG KGTTLNRAGSR+RPVGVGLKS
Sbjct: 181 DGDMEDASLKKSPSRDSVESSSSTKSNEGQENKTIKKGKKGTTLNRAGSRERPVGVGLKS 240

Query: 241 LLNVNNCCYHLSCTGNDSGNHLARKAEC 268
           LLNVNNCCYHLSCTGND  NHLARKAEC
Sbjct: 241 LLNVNNCCYHLSCTGNDRVNHLARKAEC 268

[Close]

BLAST of Cp4.1LG18g09060 vs. NCBI nr
Match: XP_022988605.1 (uncharacterized protein LOC111485806 isoform X2 [Cucurbita maxima])

HSP 1 Score: 478 bits (1231), Expect = 2.69e-169
Identity = 247/267 (92.51%), Postives = 254/267 (95.13%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLR+TALSKKVLL EGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK 120
           SIL VHNRN IYGSHDGKTICLHTKQENHKDEHDSPNANH LEQHKPN NG+RV+LKE+K
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND 180
           TMNNQHKAVEEGDDE+K EGEEGRP+ EDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND
Sbjct: 121 TMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND 180

Query: 181 DGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGVGLKS 240
           DGDMEDASLKKSPSRDSVES+SSTKSNE QEKKT KKG KGTTLNRAGSRKRPVGVGLKS
Sbjct: 181 DGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPVGVGLKS 240

Query: 241 LLNVNNCCYHLSCTGNDSGNHLARKAE 267
           LLNVNNCCYHLSCTGND GNHL  KAE
Sbjct: 241 LLNVNNCCYHLSCTGNDRGNHLPIKAE 267

[Close]

BLAST of Cp4.1LG18g09060 vs. NCBI nr
Match: XP_022988604.1 (uncharacterized protein LOC111485806 isoform X1 [Cucurbita maxima])

HSP 1 Score: 473 bits (1216), Expect = 6.00e-167
Identity = 247/271 (91.14%), Postives = 254/271 (93.73%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLR+TALSKKVLL EGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK 120
           SIL VHNRN IYGSHDGKTICLHTKQENHKDEHDSPNANH LEQHKPN NG+RV+LKE+K
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQN----V 180
           TMNNQHKAVEEGDDE+K EGEEGRP+ EDNRCLICPGSPSFRVYFVEQTPNEKQN    V
Sbjct: 121 TMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQNACCTV 180

Query: 181 EMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGV 240
           EMNDDGDMEDASLKKSPSRDSVES+SSTKSNE QEKKT KKG KGTTLNRAGSRKRPVGV
Sbjct: 181 EMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPVGV 240

Query: 241 GLKSLLNVNNCCYHLSCTGNDSGNHLARKAE 267
           GLKSLLNVNNCCYHLSCTGND GNHL  KAE
Sbjct: 241 GLKSLLNVNNCCYHLSCTGNDRGNHLPIKAE 271

[Close]

BLAST of Cp4.1LG18g09060 vs. ExPASy TrEMBL
Match: A0A6J1E3W4 (uncharacterized protein LOC111429712 OS=Cucurbita moschata OX=3662 GN=LOC111429712 PE=4 SV=1)

HSP 1 Score: 494 bits (1273), Expect = 5.17e-176
Identity = 254/268 (94.78%), Postives = 258/268 (96.27%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK 120
           SILPVHNRNSIYGSHDGKTICLHTKQENH DEHDSPNANHLLEQHKPN NG+RVELKENK
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHMDEHDSPNANHLLEQHKPNDNGTRVELKENK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND 180
           TMNNQ  AVEEGDDENKEEGEEGRP+ EDNRCLICPGSPSFRVYFVEQTPN+KQNVEMND
Sbjct: 121 TMNNQRTAVEEGDDENKEEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNDKQNVEMND 180

Query: 181 DGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGVGLKS 240
           DGDMEDASLKKSPSRDSVESSSSTKSNEGQE KT KKG KGTTLNRAGSR+RPVGVGLKS
Sbjct: 181 DGDMEDASLKKSPSRDSVESSSSTKSNEGQENKTIKKGKKGTTLNRAGSRERPVGVGLKS 240

Query: 241 LLNVNNCCYHLSCTGNDSGNHLARKAEC 268
           LLNVNNCCYHLSCTGND  NHLARKAEC
Sbjct: 241 LLNVNNCCYHLSCTGNDRVNHLARKAEC 268

[Close]

BLAST of Cp4.1LG18g09060 vs. ExPASy TrEMBL
Match: A0A6J1JK15 (uncharacterized protein LOC111485806 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485806 PE=4 SV=1)

HSP 1 Score: 478 bits (1231), Expect = 1.30e-169
Identity = 247/267 (92.51%), Postives = 254/267 (95.13%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLR+TALSKKVLL EGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK 120
           SIL VHNRN IYGSHDGKTICLHTKQENHKDEHDSPNANH LEQHKPN NG+RV+LKE+K
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND 180
           TMNNQHKAVEEGDDE+K EGEEGRP+ EDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND
Sbjct: 121 TMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQNVEMND 180

Query: 181 DGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGVGLKS 240
           DGDMEDASLKKSPSRDSVES+SSTKSNE QEKKT KKG KGTTLNRAGSRKRPVGVGLKS
Sbjct: 181 DGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPVGVGLKS 240

Query: 241 LLNVNNCCYHLSCTGNDSGNHLARKAE 267
           LLNVNNCCYHLSCTGND GNHL  KAE
Sbjct: 241 LLNVNNCCYHLSCTGNDRGNHLPIKAE 267

[Close]

BLAST of Cp4.1LG18g09060 vs. ExPASy TrEMBL
Match: A0A6J1JM15 (uncharacterized protein LOC111485806 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485806 PE=4 SV=1)

HSP 1 Score: 473 bits (1216), Expect = 2.90e-167
Identity = 247/271 (91.14%), Postives = 254/271 (93.73%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLR+TALSKKVLL EGEIEEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPNANHLLEQHKPNHNGSRVELKENK 120
           SIL VHNRN IYGSHDGKTICLHTKQENHKDEHDSPNANH LEQHKPN NG+RV+LKE+K
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDK 120

Query: 121 TMNNQHKAVEEGDDENKEEGEEGRPEEEDNRCLICPGSPSFRVYFVEQTPNEKQN----V 180
           TMNNQHKAVEEGDDE+K EGEEGRP+ EDNRCLICPGSPSFRVYFVEQTPNEKQN    V
Sbjct: 121 TMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQNACCTV 180

Query: 181 EMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGV 240
           EMNDDGDMEDASLKKSPSRDSVES+SSTKSNE QEKKT KKG KGTTLNRAGSRKRPVGV
Sbjct: 181 EMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPVGV 240

Query: 241 GLKSLLNVNNCCYHLSCTGNDSGNHLARKAE 267
           GLKSLLNVNNCCYHLSCTGND GNHL  KAE
Sbjct: 241 GLKSLLNVNNCCYHLSCTGNDRGNHLPIKAE 271

[Close]

BLAST of Cp4.1LG18g09060 vs. ExPASy TrEMBL
Match: A0A5D3BHA4 (ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00270 PE=4 SV=1)

HSP 1 Score: 266 bits (680), Expect = 1.74e-85
Identity = 166/298 (55.70%), Postives = 201/298 (67.45%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKL PEGE + P IRPLL R KF E RKRKNGTHLR+ ALSKKVLLKEGE EEEN
Sbjct: 1   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 60

Query: 61  SILPVHNRNSIYGSHDGKTICL----HTKQENHKDEHDSPN-----------------AN 120
           ++  V NR+       G T CL    HT     KDEH+S +                 +N
Sbjct: 61  AMF-VDNRHEC-----GSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSN 120

Query: 121 HLLEQHKPNHNGSR---------VELKENKTMNNQHKAVEEGDDENKEEGEEGRPEEEDN 180
            +LE+    H   +         +ELK++KTMN +HK ++EGD+ NK+EGE+GRP+ E+N
Sbjct: 121 RILEEEPRPHIQLKTTHPDDTPVLELKQDKTMN-EHKCIQEGDENNKKEGEDGRPDNEEN 180

Query: 181 R-CLICPGSPSFRVYFVEQTPNEKQNVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEG 240
           R  +ICPGSPSFR YFVE+T ++K+ VEM D G M D S KKSPS DSVES++S KS EG
Sbjct: 181 RGSIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEG 240

Query: 241 QEKKTTKKGIKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDSGNHLARKAE 267
           QE K  KKG KGTT NR  S++RPV VG+K+LLNV +C YHLSC+GND  N LARKAE
Sbjct: 241 QENKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKSC-YHLSCSGNDRANLLARKAE 290

[Close]

BLAST of Cp4.1LG18g09060 vs. ExPASy TrEMBL
Match: A0A1S3CLT6 (uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=4 SV=1)

HSP 1 Score: 266 bits (680), Expect = 2.11e-85
Identity = 166/298 (55.70%), Postives = 201/298 (67.45%), Query Frame = 0


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60
           MGCGNSKL PEGE + P IRPLL R KF E RKRKNGTHLR+ ALSKKVLLKEGE EEEN
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66

Query: 61  SILPVHNRNSIYGSHDGKTICL----HTKQENHKDEHDSPN-----------------AN 120
           ++  V NR+       G T CL    HT     KDEH+S +                 +N
Sbjct: 67  AMF-VDNRHEC-----GSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSN 126

Query: 121 HLLEQHKPNHNGSR---------VELKENKTMNNQHKAVEEGDDENKEEGEEGRPEEEDN 180
            +LE+    H   +         +ELK++KTMN +HK ++EGD+ NK+EGE+GRP+ E+N
Sbjct: 127 RILEEEPRPHIQLKTTHPDDTPVLELKQDKTMN-EHKCIQEGDENNKKEGEDGRPDNEEN 186

Query: 181 R-CLICPGSPSFRVYFVEQTPNEKQNVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEG 240
           R  +ICPGSPSFR YFVE+T ++K+ VEM D G M D S KKSPS DSVES++S KS EG
Sbjct: 187 RGSIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEG 246

Query: 241 QEKKTTKKGIKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDSGNHLARKAE 267
           QE K  KKG KGTT NR  S++RPV VG+K+LLNV +C YHLSC+GND  N LARKAE
Sbjct: 247 QENKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKSC-YHLSCSGNDRANLLARKAE 296

[Close]

BLAST of Cp4.1LG18g09060 vs. TAIR 10
Match: AT5G50830.2 (unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 14; Bacteria - 239; Metazoa - 1329; Fungi - 394; Plants - 197; Viruses - 79; Other Eukaryotes - 2498 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 2.1e-05
Identity = 85/303 (28.05%), Postives = 137/303 (45.21%), Query Frame = 0


Query: 1   MGCGNSKL------TPEGESILPM---IRPLLFRTKFAEFRKRKNGTHLR-ETALSKKVL 60
           MGCG S+L        E   ++P+   IRPLL R +  E +KR +   L+    LSKK L
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLL-RRRLEEMKKRSHAGVLKGSQTLSKKEL 60

Query: 61  LK-----EGEIEEEN--------SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPN 120
           L+     +GE  EEN         + P  + N      + K   ++ K  +  D  +   
Sbjct: 61  LRHNSSEDGEDTEENDGSLKASAKVAPAPDHNV-----EEKKEVIYEKIPSKDDVKEVKE 120

Query: 121 ANHLLEQHKPNHNGSRVELKENKTMNNQHKAVEEGDDEN------KEEGEEGRPEEED-- 180
              + +Q + NH+   VE +E +      K  EE  D++      K+EG++G+  + D  
Sbjct: 121 EVVVNKQEEDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVKKEGDDGKNHDVDEG 180

Query: 181 -----NRCLICPGSPSFRVYFVEQTPNEKQNVEMNDDGDMEDASLKKSPSRDSVESSSST 240
                +  +I PGSPSFRVY V+  P++    + +++ D+EDA  +KS   +SV  ++  
Sbjct: 181 SINNFDERMIGPGSPSFRVYCVD-VPSD----DDDEEKDVEDA--RKSMETESV--TTEI 240

Query: 241 KSNEGQEKKTTKKGIKGTTLNRAGSRKRPVGVGLKSLLNVNNCCY-HLSCTGNDSGNHLA 267
           K  +G   K  KK  +G        ++  + +  K L NV   CY    C GN     + 
Sbjct: 241 KEVDGSIVKKEKKERRG--------KRFGIALPRKYLANVTAPCYAGGGCMGNTHSRLVQ 280

[Close]

BLAST of Cp4.1LG18g09060 vs. TAIR 10
Match: AT5G50830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 4984 Blast hits to 3288 proteins in 342 species: Archae - 12; Bacteria - 257; Metazoa - 1366; Fungi - 452; Plants - 199; Viruses - 77; Other Eukaryotes - 2621 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 4.8e-05
Identity = 85/305 (27.87%), Postives = 135/305 (44.26%), Query Frame = 0


Query: 1   MGCGNSKL------TPEGESILPM---IRPLLFRTKFAEFRKRKNGTHLR-ETALSKKVL 60
           MGCG S+L        E   ++P+   IRPLL R +  E +KR +   L+    LSKK L
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLL-RRRLEEMKKRSHAGVLKGSQTLSKKEL 60

Query: 61  LK-----EGEIEEEN--------SILPVHNRNSIYGSHDGKTICLHTKQENHKDEHDSPN 120
           L+     +GE  EEN         + P  + N      + K   ++ K  +  D  +   
Sbjct: 61  LRHNSSEDGEDTEENDGSLKASAKVAPAPDHNV-----EEKKEVIYEKIPSKDDVKEVKE 120

Query: 121 ANHLLEQHKPNHNGSRVELKENKTMNNQHKAVEEGDDEN------KEEGEEGRPEEED-- 180
              + +Q + NH+   VE +E +      K  EE  D++      K+EG++G+  + D  
Sbjct: 121 EVVVNKQEEDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVKKEGDDGKNHDVDEG 180

Query: 181 -----NRCLICPGSPSFRVYFVEQTPNEKQNVEMNDDGDMEDASLKKSPSRDSVESSSST 240
                +  +I PGSPSFRVY V+  P++    + +++ D+EDA       R S+E+ S T
Sbjct: 181 SINNFDERMIGPGSPSFRVYCVD-VPSD----DDDEEKDVEDA-------RKSMETESVT 240

Query: 241 K--SNEGQEKKTTKKGIKGTTLNRAGSRKRPVGVGLKSLLNVNNCCY-HLSCTGNDSGNH 267
                +G   K  KK  +G        ++  + +  K L NV   CY    C GN     
Sbjct: 241 TEIKEDGSIVKKEKKERRG--------KRFGIALPRKYLANVTAPCYAGGGCMGNTHSRL 279

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g09060 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g09060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516922.1	9.68e-188	100.00	uncharacterized protein LOC111780685 [Cucurbita pepo subsp. pepo]	[more]
KAG7023042.1	1.75e-178	94.91	hypothetical protein SDJN02_14064, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022921428.1	1.07e-175	94.78	uncharacterized protein LOC111429712 [Cucurbita moschata]	[more]
XP_022988605.1	2.69e-169	92.51	uncharacterized protein LOC111485806 isoform X2 [Cucurbita maxima]	[more]
XP_022988604.1	6.00e-167	91.14	uncharacterized protein LOC111485806 isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG18g09060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E3W4	5.17e-176	94.78	uncharacterized protein LOC111429712 OS=Cucurbita moschata OX=3662 GN=LOC1114297...	[more]
A0A6J1JK15	1.30e-169	92.51	uncharacterized protein LOC111485806 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JM15	2.90e-167	91.14	uncharacterized protein LOC111485806 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3BHA4	1.74e-85	55.70	ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CLT6	2.11e-85	55.70	uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=...	[more]

BLAST of Cp4.1LG18g09060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50830.2	2.1e-05	28.05	unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 1...	[more]
AT5G50830.1	4.8e-05	27.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g09060.1	Cp4.1LG18g09060.1	mRNA