Cp4.1LG18g08710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g08710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Golgin subfamily A member 6-like protein 2
Location	Cp4.1LG18: 7901893 .. 7903630 (-)
RNA-Seq Expression	Cp4.1LG18g08710
Synteny	Cp4.1LG18g08710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACACATCAGATTCTGAATTCCGAATGGGGTCACAGGTCATATCTGTCTGTATTTCCTTGTATAAAATGACAGCCATTCACGAGCCTCATAGACGTTTCCACTAATCATTAACTCTGAGAAAGAGCTAACCAAGTAGAGCAAGGGATAAGCACAGCCAAAATATAGGTACCCCAAATGCAGCTCTCTTATGGAGGAGCCTTTCATCTCTCTCCTTTATTTCCAGTCTATAAGGCCAACTTGAAGACTCGCTCAGTAACCCAGAAAGGCTAAAGAAGCAAAACCTTCACTAAGATGGGTGCATGCTCAAGCAAAGATGGGAGTGAGATCTGTGATGATGATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAGTGTCTGAGATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACTGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATTTTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATACAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAGCAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGTATGTCTATGAACTTATCTTTTCTTCTGGTCATCACAGAAAATCTAATTTTCCTTTTGTTTCTGAATTTTCTGTTGATTTTCTTTCAATTTACTACTTTTAAGCTCAAGATTAGTGTTAGAAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTTGTGGTTTTGTTTTTGGGCTTCCCCAGAAGGCCTCGTACGAATGGAGATGTATTCCTTACTTATAAACTCATGATCATTCCCTACATTAGCCAACGTGGGACTCACTCCCCACAATCCTTAACAATTAGATCAATGAAGGCTAGCAAAAACTAAGACGGCAAAAATTCAATAAATGCACATTAGATTTCCCATCACTAACAAGCACTCATCGGTTACTTTGATAGGAGATGGATTATACTGGGGAGCAACTGAGCGGACAGACGCACTACGAACAGAATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGCTAGGAACTTTCCATAAATGCGTCTGTAAGTAACCTGCCAATGAATTGGGCAAGAAAACAAAATTTTCAATACCATATTAGAATGATGAACAGATAATGAAATGTCGATTGAATGTGCTTTGTAAAGATTGTTACCTCTGCACGCCCACCCTTCATTTCAACCCACTGGTCATTCTCATCCTCATTTTGTCGGCATGGTCCAAAGGTAAACACATTTTTGTTCCTTAGACTGGGATTTTGGGAAGAGTTGCAAAAGATGAAAAGAAAATAAAAGATTAATCCTCTCTCAGTTGACAGGAAGATAACTGTGCTGATTCATAGATAAGGCTACAATTCAACTTCGATAGACAATCACACAGTTGATCGATTTCTTGGGATTTAAATTTAGAATATAATTATTGCACTATTGTTCAAGTTATAGT

mRNA sequence

TAACACATCAGATTCTGAATTCCGAATGGGGTCACAGGTCATATCTGTCTGTATTTCCTTGTATAAAATGACAGCCATTCACGAGCCTCATAGACGTTTCCACTAATCATTAACTCTGAGAAAGAGCTAACCAAGTAGAGCAAGGGATAAGCACAGCCAAAATATAGGTACCCCAAATGCAGCTCTCTTATGGAGGAGCCTTTCATCTCTCTCCTTTATTTCCAGTCTATAAGGCCAACTTGAAGACTCGCTCAGTAACCCAGAAAGGCTAAAGAAGCAAAACCTTCACTAAGATGGGTGCATGCTCAAGCAAAGATGGGAGTGAGATCTGTGATGATGATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAGTGTCTGAGATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACTGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATTTTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATACAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAGCAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCAACTGAGCGGACAGACGCACTACGAACAGAATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGCTAGGAACTTTCCATAAATGCGTCTGTAAGTAACCTGCCAATGAATTGGGCAAGAAAACAAAATTTTCAATACCATATTAGAATGATGAACAGATAATGAAATGTCGATTGAATGTGCTTTGTAAAGATTGTTACCTCTGCACGCCCACCCTTCATTTCAACCCACTGGTCATTCTCATCCTCATTTTGTCGGCATGGTCCAAAGGTAAACACATTTTTGTTCCTTAGACTGGGATTTTGGGAAGAGTTGCAAAAGATGAAAAGAAAATAAAAGATTAATCCTCTCTCAGTTGACAGGAAGATAACTGTGCTGATTCATAGATAAGGCTACAATTCAACTTCGATAGACAATCACACAGTTGATCGATTTCTTGGGATTTAAATTTAGAATATAATTATTGCACTATTGTTCAAGTTATAGT

Coding sequence (CDS)

ATGGGTGCATGCTCAAGCAAAGATGGGAGTGAGATCTGTGATGATGATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAGTGTCTGAGATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACTGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATTTTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATACAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAGCAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCAACTGAGCGGACAGACGCACTACGAACAGAATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGCTAGGAACTTTCCATAAATGCGTCTGTAAGTAA

Protein sequence

MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWKTEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK

Homology

[Close]

BLAST of Cp4.1LG18g08710 vs. NCBI nr
Match: XP_023515394.1 (uncharacterized protein LOC111779565 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421 bits (1082), Expect = 3.00e-148
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60
           MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK
Sbjct: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA
Sbjct: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218
           EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]

BLAST of Cp4.1LG18g08710 vs. NCBI nr
Match: XP_022988640.1 (uncharacterized protein LOC111485829 [Cucurbita maxima] >KAG6589429.1 hypothetical protein SDJN03_14852, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023108.1 hypothetical protein SDJN02_14133, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 418 bits (1075), Expect = 3.50e-147
Identity = 216/218 (99.08%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60
           MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGV+SEMDKVTKAHEKDKMVFAFKEAGWK
Sbjct: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           +EKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA
Sbjct: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218
           EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]

BLAST of Cp4.1LG18g08710 vs. NCBI nr
Match: XP_022922098.1 (uncharacterized protein LOC111430150 [Cucurbita moschata])

HSP 1 Score: 414 bits (1064), Expect = 1.66e-145
Identity = 214/218 (98.17%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60
           MGACSSK+GSEICDDDVRGLKEKVRLLREEVRGV+SEMDKVTKAHEKDKMVFAFKEA WK
Sbjct: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60

Query: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           +EKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA
Sbjct: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218
           EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]

BLAST of Cp4.1LG18g08710 vs. NCBI nr
Match: XP_004138095.1 (uncharacterized protein LOC101204691 [Cucumis sativus] >KGN63552.1 hypothetical protein Csa_013066 [Cucumis sativus])

HSP 1 Score: 358 bits (920), Expect = 1.47e-123
Identity = 185/218 (84.86%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60
           MG CSSKDGSEI  DDV+GLKEK+RLLREEVRGV+ EMDK TKAHEKD +VFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           TEKKRLKEEVKMLRK+V E  TEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERT+AL+T+LQAKEETIKALKE++VSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218
           EQ+KYKRNR+IDILRQSLRIMTSKKEQQ+ TFHKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 218

[Close]

BLAST of Cp4.1LG18g08710 vs. NCBI nr
Match: XP_038879675.1 (uncharacterized protein LOC120071454 [Benincasa hispida])

HSP 1 Score: 357 bits (917), Expect = 4.21e-123
Identity = 185/218 (84.86%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60
           MG CSSKDGSEI +D+V+GLKEK+RLLREEVRGV+S MDK TKAHEKD +VFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIYEDEVKGLKEKIRLLREEVRGVMSVMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           TEKKRLKEEVKMLRK+V E ITEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WGA+ERT+AL+TEL+AKEETIKALKE +VSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGASERTEALKTELEAKEETIKALKEEVVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218
           EQEKYKRNR+IDILRQSLRIMTSKKEQQ+  FHKCVCK
Sbjct: 181 EQEKYKRNREIDILRQSLRIMTSKKEQQIEPFHKCVCK 218

[Close]

BLAST of Cp4.1LG18g08710 vs. ExPASy TrEMBL
Match: A0A6J1JK50 (uncharacterized protein LOC111485829 OS=Cucurbita maxima OX=3661 GN=LOC111485829 PE=4 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 1.69e-147
Identity = 216/218 (99.08%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60
           MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGV+SEMDKVTKAHEKDKMVFAFKEAGWK
Sbjct: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           +EKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA
Sbjct: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218
           EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]

BLAST of Cp4.1LG18g08710 vs. ExPASy TrEMBL
Match: A0A6J1E5M3 (uncharacterized protein LOC111430150 OS=Cucurbita moschata OX=3662 GN=LOC111430150 PE=4 SV=1)

HSP 1 Score: 414 bits (1064), Expect = 8.06e-146
Identity = 214/218 (98.17%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60
           MGACSSK+GSEICDDDVRGLKEKVRLLREEVRGV+SEMDKVTKAHEKDKMVFAFKEA WK
Sbjct: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60

Query: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           +EKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA
Sbjct: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218
           EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]

BLAST of Cp4.1LG18g08710 vs. ExPASy TrEMBL
Match: A0A0A0LS07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1)

HSP 1 Score: 358 bits (920), Expect = 7.12e-124
Identity = 185/218 (84.86%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60
           MG CSSKDGSEI  DDV+GLKEK+RLLREEVRGV+ EMDK TKAHEKD +VFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           TEKKRLKEEVKMLRK+V E  TEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERT+AL+T+LQAKEETIKALKE++VSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218
           EQ+KYKRNR+IDILRQSLRIMTSKKEQQ+ TFHKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 218

[Close]

BLAST of Cp4.1LG18g08710 vs. ExPASy TrEMBL
Match: A0A5D3BGY2 (Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001180 PE=4 SV=1)

HSP 1 Score: 353 bits (905), Expect = 1.37e-121
Identity = 181/218 (83.03%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60
           MG CSSKDGSEI  DDV+GLKEK+RLLREEVRGV++EMDK TKAHEKD +VFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           TEKKRL+EEVKMLRK+V E  TEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERT+AL+T+LQAKEETIK+LKE++VSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218
           EQ+KYKRNR+IDILRQSLRIMTSKKEQQ+ T HKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETSHKCVCK 218

[Close]

BLAST of Cp4.1LG18g08710 vs. ExPASy TrEMBL
Match: A0A1S3CLU2 (uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=4 SV=1)

HSP 1 Score: 353 bits (905), Expect = 1.37e-121
Identity = 181/218 (83.03%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60
           MG CSSKDGSEI  DDV+GLKEK+RLLREEVRGV++EMDK TKAHEKD +VFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           TEKKRL+EEVKMLRK+V E  TEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERT+AL+T+LQAKEETIK+LKE++VSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218
           EQ+KYKRNR+IDILRQSLRIMTSKKEQQ+ T HKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETSHKCVCK 218

[Close]

BLAST of Cp4.1LG18g08710 vs. TAIR 10
Match: AT3G23930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins in 646 species: Archae - 82; Bacteria - 826; Metazoa - 5047; Fungi - 759; Plants - 314; Viruses - 86; Other Eukaryotes - 3525 (source: NCBI BLink). )

HSP 1 Score: 119.4 bits (298), Expect = 3.6e-27
Identity = 92/227 (40.53%), Postives = 135/227 (59.47%), Query Frame = 0


Query: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVF-AFKEA-- 60
           MG C+SK         VR +KE  +      R ++ E D      E++K++F   KEA  
Sbjct: 1   MGGCTSKQERR----GVRSVKETSKDQSRGRRHLIKERD------EREKVMFLQLKEAER 60

Query: 61  GWKTEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHR 120
            W+ E+K+L+EEV+ LRK++ ER    EE     KT T  + E    ++  ++  ERA R
Sbjct: 61  EWRKERKKLREEVRRLRKKLEER----EEA----KTTTTEEREYWKWVV-EEMCVERAVR 120

Query: 121 DEAIEKWKQLYHAIKIELDDLIQRTHNGDG-------LYWGATERTDA-----LRTELQA 180
           DEA+EKWKQLY AIK ELD LI  T +  G       L     E T+A     LR E++ 
Sbjct: 121 DEAVEKWKQLYLAIKNELDHLISHTTSSSGEAIMQRKLEEQEEEETEAKRVEVLRDEVRV 180

Query: 181 KEETIKALKERLVSMEQEKYKRNRDIDILRQSLRIMTSKKEQQLGTF 213
           KEET++ L+E++V M+++KY++ R+ID+LRQSLRI+ SKK+++ G+F
Sbjct: 181 KEETVETLEEQIVLMDRQKYEKEREIDLLRQSLRILGSKKKKKTGSF 208

[Close]

BLAST of Cp4.1LG18g08710 vs. TAIR 10
Match: AT4G13540.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23930.1); Has 4658 Blast hits to 3455 proteins in 431 species: Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi - 436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 5.6e-20
Identity = 72/199 (36.18%), Postives = 112/199 (56.28%), Query Frame = 0


Query: 9   GSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFK--EAGWKTEKKRL 68
           G     D+    K ++++   E R      +   +  EK++++ A K  E  W+ E+KRL
Sbjct: 2   GGSTSKDERNSSKRRIKVKANEQR----RRETRRELDEKERVILALKMAETEWRKERKRL 61

Query: 69  KEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEAIEKWKQ 128
           +EEVK LR+++ E+          +  A + + E     +  Q+  ERA R+EA+E+WKQ
Sbjct: 62  REEVKRLRQKMEEK---------EEGKAKQHEWEW----VVEQMCLERAVREEAVERWKQ 121

Query: 129 LYHAIKIELDDLIQRTHNGDGLYWGATER----TDALRTELQAKEETIKALKERLVSMEQ 188
           LY AIK ELDDLI  T+ G+ L     E        LR E++A+ ETI+ LK R+  ME+
Sbjct: 122 LYFAIKNELDDLIHTTY-GEALRQKPQEEVAKAVQELRKEVKARGETIETLKGRINLMEK 181

Query: 189 EKYKRNRDIDILRQSLRIM 202
           ++  + R+ID+LRQSLRI+
Sbjct: 182 QQNGKEREIDLLRQSLRIL 182

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g08710 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g08710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515394.1	3.00e-148	100.00	uncharacterized protein LOC111779565 [Cucurbita pepo subsp. pepo]	[more]
XP_022988640.1	3.50e-147	99.08	uncharacterized protein LOC111485829 [Cucurbita maxima] >KAG6589429.1 hypothetic...	[more]
XP_022922098.1	1.66e-145	98.17	uncharacterized protein LOC111430150 [Cucurbita moschata]	[more]
XP_004138095.1	1.47e-123	84.86	uncharacterized protein LOC101204691 [Cucumis sativus] >KGN63552.1 hypothetical ...	[more]
XP_038879675.1	4.21e-123	84.86	uncharacterized protein LOC120071454 [Benincasa hispida]	[more]

BLAST of Cp4.1LG18g08710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JK50	1.69e-147	99.08	uncharacterized protein LOC111485829 OS=Cucurbita maxima OX=3661 GN=LOC111485829...	[more]
A0A6J1E5M3	8.06e-146	98.17	uncharacterized protein LOC111430150 OS=Cucurbita moschata OX=3662 GN=LOC1114301...	[more]
A0A0A0LS07	7.12e-124	84.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1	[more]
A0A5D3BGY2	1.37e-121	83.03	Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CLU2	1.37e-121	83.03	uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=...	[more]

BLAST of Cp4.1LG18g08710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23930.1	3.6e-27	40.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G13540.1	5.6e-20	36.18	unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsi...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..87
None	No IPR available	COILS	Coil	Coil	coord: 156..183
None	No IPR available	COILS	Coil	Coil	coord: 121..141
None	No IPR available	PANTHER	PTHR37226	GOLGIN FAMILY A PROTEIN	coord: 1..208
None	No IPR available	PANTHER	PTHR37226:SF4	GOLGIN FAMILY A PROTEIN	coord: 1..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g08710.1	Cp4.1LG18g08710.1	mRNA