Cp4.1LG18g08000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG18g08000
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG18: 7421731 .. 7423224 (-)
RNA-Seq ExpressionCp4.1LG18g08000
SyntenyCp4.1LG18g08000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCTCTGTACATTGCAATGCACGCACGCCAGATGTTCGATGAAATGTCGCTGAGACGATGCGTCTCATTGTTCAAGTTAAAATGGGCTAGCTTCTTCGTGCAATCCGTCTGTACGGGGCATCGCTTTTGTTCCCTTCATTCCACCGTAAGAAACGGAGATTCTGTGTCAAAATTGTGTGAAGTGGTTTCATGCACGATCGGAGGGTTAGATGAATTGGAAGGCACTCTGAACAAGTTCCCAGTATCCTTGACATCTTCACTCGTTACCCAGGTTATTGATTCTTGCAAAAATGAAGCTCCCAATAGAAGATTGCTTAGGTTTTTCTCATGGTCTCTCAAGAAATTAAACCACGATTTGGAAGATGAAGATTTCAATTATGCCATCCGCTTATTTGCTCAGAAGAAGGATTACACTGCCATTGATATTTTACTTTCTGATCTCAAGAAAGCTCGCCGCGCAATGGATGGCCAGACCTTCGGTCTTGTGGCTGAGGCTTTAGTCAAAATGGGCAGAGAAGATGAAGCCCTAGGTCTGTTCAAGAACTTGGACAAGTACAAATGCCCACACGACCAATTCACTGTGACTGCTATTATCACTGCTCTCTGTGCAAAAGGGCATGCTAAAAGAGCAGAAGGGGTAGTCCTGCACCACAAGGACAAGATCTCTGGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCCATTCAGAAGAACACTAAAGAAGCAAGAAGGATACTCAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCAGCTTCAACACTTTCCTCAGGTGCCTTTGCGAGCAGAATCTTAAGAAAAATCCTTCAGGTCTCGTGCCTGAAGCCTTGAATGTGATGATGGAAATGAGATCCTACAACATTGCTCCCAATTCAATCAGTTATAATATACTGCTGTCATGTCTGGGCAGAGCCAGGAGAGTGAAGGAATCATGTAGAATCCTTGAGACGATGAAGCGAACCGGTTGTCGACCCGATTGCATAAGCTACTATCTTGTGGCGAGAGTGCTGTTCCTGTCTGGAAGATTTGGGAAAGGGTGCAGAATTGTGGAGGAGATGATTGAGGAGGGGCTGATCCCGGATCGAAAATTCTACTATGATTTGATTGGTATTCTGTGTGGTGTTGAGAGTGAGAAGTATGCACTTGAGCTGTTTGAGAAGATGAAGAGAAGCTCACTGGGGGGTTATGGTCCAGTTTATGATGTGCTTATACCGAAGCTCTGCAGGGGAGGTGATTTTGAAATGGGGAGGCAACTGTGGGAGGAGGCCATGGCTATGGGCCTCACGCTTCGCTGCTCAAGCGATGTTTTGGATCCTTCAATCACCAAGGTTTTCAAGCCAACAAGAAAGATTGACAATCAAGGTCTTGAAGAATCCAGTAGAGCTGAGAAGCAGAACAAAGCTGCAACTGACAAATCAAAGGCAAGGGGAAAGAAAAGTAAGAATCTGTCTTGA

mRNA sequence

ATGTTTCCTCTGTACATTGCAATGCACGCACGCCAGATGTTCGATGAAATGTCGCTGAGACGATGCGTCTCATTGTTCAAGTTAAAATGGGCTAGCTTCTTCGTGCAATCCGTCTGTACGGGGCATCGCTTTTGTTCCCTTCATTCCACCGTAAGAAACGGAGATTCTGTGTCAAAATTGTGTGAAGTGGTTTCATGCACGATCGGAGGGTTAGATGAATTGGAAGGCACTCTGAACAAGTTCCCAGTATCCTTGACATCTTCACTCGTTACCCAGGTTATTGATTCTTGCAAAAATGAAGCTCCCAATAGAAGATTGCTTAGGTTTTTCTCATGGTCTCTCAAGAAATTAAACCACGATTTGGAAGATGAAGATTTCAATTATGCCATCCGCTTATTTGCTCAGAAGAAGGATTACACTGCCATTGATATTTTACTTTCTGATCTCAAGAAAGCTCGCCGCGCAATGGATGGCCAGACCTTCGGTCTTGTGGCTGAGGCTTTAGTCAAAATGGGCAGAGAAGATGAAGCCCTAGGTCTGTTCAAGAACTTGGACAAGTACAAATGCCCACACGACCAATTCACTGTGACTGCTATTATCACTGCTCTCTGTGCAAAAGGGCATGCTAAAAGAGCAGAAGGGGTAGTCCTGCACCACAAGGACAAGATCTCTGGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCCATTCAGAAGAACACTAAAGAAGCAAGAAGGATACTCAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCAGCTTCAACACTTTCCTCAGGTGCCTTTGCGAGCAGAATCTTAAGAAAAATCCTTCAGGTCTCGTGCCTGAAGCCTTGAATGTGATGATGGAAATGAGATCCTACAACATTGCTCCCAATTCAATCAGTTATAATATACTGCTGTCATGTCTGGGCAGAGCCAGGAGAGTGAAGGAATCATGTAGAATCCTTGAGACGATGAAGCGAACCGGTTGTCGACCCGATTGCATAAGCTACTATCTTGTGGCGAGAGTGCTGTTCCTGTCTGGAAGATTTGGGAAAGGGTGCAGAATTGTGGAGGAGATGATTGAGGAGGGGCTGATCCCGGATCGAAAATTCTACTATGATTTGATTGGTATTCTGTGTGGTGTTGAGAGTGAGAAGTATGCACTTGAGCTGTTTGAGAAGATGAAGAGAAGCTCACTGGGGGGTTATGGTCCAGTTTATGATGTGCTTATACCGAAGCTCTGCAGGGGAGGTGATTTTGAAATGGGGAGGCAACTGTGGGAGGAGGCCATGGCTATGGGCCTCACGCTTCGCTGCTCAAGCGATGTTTTGGATCCTTCAATCACCAAGGTTTTCAAGCCAACAAGAAAGATTGACAATCAAGGTCTTGAAGAATCCAGTAGAGCTGAGAAGCAGAACAAAGCTGCAACTGACAAATCAAAGGCAAGGGGAAAGAAAAGTAAGAATCTGTCTTGA

Coding sequence (CDS)

ATGTTTCCTCTGTACATTGCAATGCACGCACGCCAGATGTTCGATGAAATGTCGCTGAGACGATGCGTCTCATTGTTCAAGTTAAAATGGGCTAGCTTCTTCGTGCAATCCGTCTGTACGGGGCATCGCTTTTGTTCCCTTCATTCCACCGTAAGAAACGGAGATTCTGTGTCAAAATTGTGTGAAGTGGTTTCATGCACGATCGGAGGGTTAGATGAATTGGAAGGCACTCTGAACAAGTTCCCAGTATCCTTGACATCTTCACTCGTTACCCAGGTTATTGATTCTTGCAAAAATGAAGCTCCCAATAGAAGATTGCTTAGGTTTTTCTCATGGTCTCTCAAGAAATTAAACCACGATTTGGAAGATGAAGATTTCAATTATGCCATCCGCTTATTTGCTCAGAAGAAGGATTACACTGCCATTGATATTTTACTTTCTGATCTCAAGAAAGCTCGCCGCGCAATGGATGGCCAGACCTTCGGTCTTGTGGCTGAGGCTTTAGTCAAAATGGGCAGAGAAGATGAAGCCCTAGGTCTGTTCAAGAACTTGGACAAGTACAAATGCCCACACGACCAATTCACTGTGACTGCTATTATCACTGCTCTCTGTGCAAAAGGGCATGCTAAAAGAGCAGAAGGGGTAGTCCTGCACCACAAGGACAAGATCTCTGGCACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCCATTCAGAAGAACACTAAAGAAGCAAGAAGGATACTCAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCAGCTTCAACACTTTCCTCAGGTGCCTTTGCGAGCAGAATCTTAAGAAAAATCCTTCAGGTCTCGTGCCTGAAGCCTTGAATGTGATGATGGAAATGAGATCCTACAACATTGCTCCCAATTCAATCAGTTATAATATACTGCTGTCATGTCTGGGCAGAGCCAGGAGAGTGAAGGAATCATGTAGAATCCTTGAGACGATGAAGCGAACCGGTTGTCGACCCGATTGCATAAGCTACTATCTTGTGGCGAGAGTGCTGTTCCTGTCTGGAAGATTTGGGAAAGGGTGCAGAATTGTGGAGGAGATGATTGAGGAGGGGCTGATCCCGGATCGAAAATTCTACTATGATTTGATTGGTATTCTGTGTGGTGTTGAGAGTGAGAAGTATGCACTTGAGCTGTTTGAGAAGATGAAGAGAAGCTCACTGGGGGGTTATGGTCCAGTTTATGATGTGCTTATACCGAAGCTCTGCAGGGGAGGTGATTTTGAAATGGGGAGGCAACTGTGGGAGGAGGCCATGGCTATGGGCCTCACGCTTCGCTGCTCAAGCGATGTTTTGGATCCTTCAATCACCAAGGTTTTCAAGCCAACAAGAAAGATTGACAATCAAGGTCTTGAAGAATCCAGTAGAGCTGAGAAGCAGAACAAAGCTGCAACTGACAAATCAAAGGCAAGGGGAAAGAAAAGTAAGAATCTGTCTTGA

Protein sequence

MFPLYIAMHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKLCEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYNIAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNKAATDKSKARGKKSKNLS
Homology
BLAST of Cp4.1LG18g08000 vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 1.2e-163
Identity = 283/462 (61.26%), Postives = 358/462 (77.49%), Query Frame = 0

Query: 44  FCSLHSTVRNGDSVSKLCEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPN 103
           FCS H   R+  ++ ++  +VS  +GGLD+LE  LN+  VS +S+LVTQVI+SCKNE   
Sbjct: 24  FCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSP 83

Query: 104 RRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGL 163
           RRLLRFFSWS K L   L D++FNY +R+ A+KKD+TA+ ILLSDL+K  RAMD QTF +
Sbjct: 84  RRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSI 143

Query: 164 VAEALVKMGREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKI 223
           VAE LVK+G+E++A+G+FK LDK+ CP D FTVTAII+ALC++GH KRA GV+ HHKD I
Sbjct: 144 VAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVI 203

Query: 224 SGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPS 283
           SG    +YRSLL+GWS+Q+N KEARR++++MKS G  PDLF FN+ L CLCE+N+ +NPS
Sbjct: 204 SGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPS 263

Query: 284 GLVPEALNVMMEMRSYNIAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISY 343
           GLVPEALN+M+EMRSY I P S+SYNILLSCLGR RRV+ESC+ILE MKR+GC PD  SY
Sbjct: 264 GLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSY 323

Query: 344 YLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKR 403
           Y V RVL+L+GRFGKG +IV+EMIE G  P+RKFYYDLIG+LCGVE   +AL+LFEKMKR
Sbjct: 324 YFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKR 383

Query: 404 SSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTR- 463
           SS+GGYG VYD+LIPKLC+GG+FE GR+LWEEA+++ +TL CS  +LDPS+T+VFKP + 
Sbjct: 384 SSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSISLLDPSVTEVFKPMKM 443

Query: 464 -----KIDNQ--GLEESSRAEKQNKAATDKSKARGK-KSKNL 497
                 +D +   L+  +R  K       K K R K K KNL
Sbjct: 444 KEEAAMVDRRALNLKIHARMNKTKPKLKLKPKRRSKTKKKNL 485

BLAST of Cp4.1LG18g08000 vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.8e-42
Identity = 105/377 (27.85%), Postives = 188/377 (49.87%), Query Frame = 0

Query: 104 RRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGL 163
           R  L F  W     N    DE  ++ +  F ++KD+     +L  + K +    G+T   
Sbjct: 124 RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG---MLEIISKYKGIAGGKTLES 183

Query: 164 VAEALVKMGREDEALGLFKNLDK-YKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDK 223
             + LV+ GR  +    F+ ++  Y    D+ ++T ++  LC KGHA  AE +V +  ++
Sbjct: 184 AIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE 243

Query: 224 ISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNP 283
           I    + I   L+ GW I +   EA R+  EM   G      ++N  L C+C+   KK+P
Sbjct: 244 IFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDP 303

Query: 284 SGLVPEALNVMMEMRSYNIAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCIS 343
             L PE   V++EM    +  N+ ++N+L++ L + RR +E+  +   M   GC+PD  +
Sbjct: 304 FKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAET 363

Query: 344 YYLVARVLFLSGRFGKGCRIVEEMIEEGL--IPDRKFYYDLIGILCGVESEKYALELFEK 403
           Y ++ R L+ + R G+G  ++++M   G   + ++K YY  + ILCG+E  ++A+ +F+ 
Sbjct: 364 YLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKS 423

Query: 404 MKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKP 463
           MK +        YD+L+ K+C          L++EA   G+ +      +DP   K  K 
Sbjct: 424 MKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMK--KK 483

Query: 464 TRKIDNQGLEESSRAEK 478
           T+++D+   +  +  EK
Sbjct: 484 TKEVDSNVKKRETLPEK 494

BLAST of Cp4.1LG18g08000 vs. ExPASy Swiss-Prot
Match: Q9S7R4 (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 8.0e-27
Identity = 101/413 (24.46%), Postives = 179/413 (43.34%), Query Frame = 0

Query: 34  FVQSVCTGHRFCSLHSTVRNGDSVSKLCEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQV 93
           F +S+CT     +L     +  +++KL  ++S       + +  L+      T +LV  V
Sbjct: 5   FSKSLCTSAAGANLKPPPADSAAIAKL--ILSSPNTTHQDDQFLLSTKTTPWTPNLVNSV 64

Query: 94  IDSCKNEAPNRRLLRFFSWSLKKLNHDLED-EDFNYAIRLFAQKKDYTAIDILLSDLKKA 153
           +    N  P  + L+FF +        + D   F+ AI + A+   +  +  L+  ++  
Sbjct: 65  LKRLWNHGP--KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSL 124

Query: 154 RRAMDGQTFGLVAEALVKMGREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRA 213
           R     +TF +VAE     G+ D+A+ LF N+ ++ C  D  +   I+  LC     ++A
Sbjct: 125 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 184

Query: 214 EGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRC 273
             +    + + S   +  Y  +L GW + K T +A  +LKEM   G  P+L ++NT L+ 
Sbjct: 185 YELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKG 244

Query: 274 L--------------------CEQNLKK--------NPSGLVPEALNVMMEMRSYNIAPN 333
                                CE ++            +G +  A NV  EM    + P+
Sbjct: 245 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 304

Query: 334 SISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVE 393
             +YN ++  L +   V+ +  + E M R G  P+  +Y ++ R LF +G F +G  +++
Sbjct: 305 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 364

Query: 394 EMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLI 418
            M  EG  P+ + Y  +I         + AL LFEKM           Y++LI
Sbjct: 365 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412

BLAST of Cp4.1LG18g08000 vs. ExPASy Swiss-Prot
Match: Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 5.7e-25
Identity = 84/372 (22.58%), Postives = 168/372 (45.16%), Query Frame = 0

Query: 55  DSVSKLCEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSL 114
           + + K+C+ ++      +++   L+K  V +T SLV QV+    N     +   FF W+ 
Sbjct: 100 EDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGW--NQAYGFFIWAN 159

Query: 115 KKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKK--ARRAMDGQTFGLVAEALVKMG 174
            +  +      +N  + +  + +++  +  L++++ K    + +   T   V   L K G
Sbjct: 160 SQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSG 219

Query: 175 REDEALGLFKNLDK-YKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIY 234
           + ++A+  F  ++K Y    D   + +++ AL  +   + A  V L   D I    +  +
Sbjct: 220 KYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPD-ARTF 279

Query: 235 RSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALN 294
             L++G+   +   +AR ++  MK     PD+ ++ +F+   C++       G       
Sbjct: 280 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE-------GDFRRVNE 339

Query: 295 VMMEMRSYNIAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLF 354
           ++ EMR     PN ++Y I++  LG++++V E+  + E MK  GC PD   Y  +  +L 
Sbjct: 340 MLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 399

Query: 355 LSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGP 414
            +GRF     I E+M  +G+  D   Y  +I        ++ AL L ++M+        P
Sbjct: 400 KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSP 459

Query: 415 VYDVLIP--KLC 422
             +   P  K+C
Sbjct: 460 NVETYAPLLKMC 461

BLAST of Cp4.1LG18g08000 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 4.9e-24
Identity = 80/328 (24.39%), Postives = 145/328 (44.21%), Query Frame = 0

Query: 157 DGQTFGLVAEALVKMGREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVV 216
           D  T+  V   L K+G   EA+ +   +    C  +  T   +I+ LC +   + A  + 
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388

Query: 217 LHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQ 276
                K      C + SL+ G  + +N + A  + +EM+S G  PD F++N  +  LC +
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448

Query: 277 NLKKNPSGLVPEALNVMMEMRSYNIAPNSISYNILLSCLGRARRVKESCRILETMKRTGC 336
                  G + EALN++ +M     A + I+YN L+    +A + +E+  I + M+  G 
Sbjct: 449 -------GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 508

Query: 337 RPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALE 396
             + ++Y  +   L  S R     +++++MI EG  PD+  Y  L+   C     K A +
Sbjct: 509 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 568

Query: 397 LFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITK 456
           + + M  +        Y  LI  LC+ G  E+  +L       G+ L  +    +P I  
Sbjct: 569 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL--TPHAYNPVIQG 628

Query: 457 VFKPTRKIDNQGLEESSRAEKQNKAATD 485
           +F+  ++   + +       +QN+A  D
Sbjct: 629 LFR--KRKTTEAINLFREMLEQNEAPPD 645

BLAST of Cp4.1LG18g08000 vs. NCBI nr
Match: XP_023516447.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 994 bits (2570), Expect = 0.0
Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0

Query: 1   MFPLYIAMHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKL 60
           MFPLYIAMHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKL
Sbjct: 1   MFPLYIAMHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKL 60

Query: 61  CEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD 120
           CEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD
Sbjct: 61  CEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD 120

Query: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGL 180
           LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGL
Sbjct: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGL 180

Query: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240
           FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI
Sbjct: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240

Query: 241 QKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYN 300
           QKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYN
Sbjct: 241 QKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYN 300

Query: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360
           IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC
Sbjct: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360

Query: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL 420
           RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL
Sbjct: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL 420

Query: 421 CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNK 480
           CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNK
Sbjct: 421 CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNK 480

Query: 481 AATDKSKARGKKSKNLS 497
           AATDKSKARGKKSKNLS
Sbjct: 481 AATDKSKARGKKSKNLS 497

BLAST of Cp4.1LG18g08000 vs. NCBI nr
Match: XP_022921576.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita moschata])

HSP 1 Score: 951 bits (2459), Expect = 0.0
Identity = 479/497 (96.38%), Postives = 484/497 (97.38%), Query Frame = 0

Query: 1   MFPLYIAMHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKL 60
           MFPLYIAM+ARQMFDE SLRRCVSL KLKW   FVQSVCT HRFCSLHSTV+NG SVSKL
Sbjct: 1   MFPLYIAMNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKL 60

Query: 61  CEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD 120
           CEVVSCTIGGLDELE TLNK  VSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD
Sbjct: 61  CEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD 120

Query: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGL 180
           LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKM REDEALGL
Sbjct: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGL 180

Query: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240
           FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI
Sbjct: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240

Query: 241 QKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYN 300
           QKNTKEARRILKEMKSDGTMPDLFS+NTFLRCL EQNLKKNPSGLVPEALNVMMEMRSY+
Sbjct: 241 QKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYS 300

Query: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360
           IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC
Sbjct: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360

Query: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL 420
           RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL
Sbjct: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL 420

Query: 421 CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNK 480
           CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQ LEESSRAEKQNK
Sbjct: 421 CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNK 480

Query: 481 AATDKSKARGKKSKNLS 497
           AATDKSKARGK+SKNLS
Sbjct: 481 AATDKSKARGKRSKNLS 497

BLAST of Cp4.1LG18g08000 vs. NCBI nr
Match: KAG6589519.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 951 bits (2457), Expect = 0.0
Identity = 479/497 (96.38%), Postives = 484/497 (97.38%), Query Frame = 0

Query: 1   MFPLYIAMHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKL 60
           MFPLYIAM+ARQMFDE SLRRCVSL KLKW   FVQSVCT HRFCSLHSTV+NG SVSKL
Sbjct: 1   MFPLYIAMNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTLHRFCSLHSTVKNGASVSKL 60

Query: 61  CEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD 120
           CEVVSCTIGGLDELE TLNK  VSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD
Sbjct: 61  CEVVSCTIGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD 120

Query: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGL 180
           LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKM REDEALGL
Sbjct: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGL 180

Query: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240
           FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI
Sbjct: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240

Query: 241 QKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYN 300
           QKNTKEARRILKEMKSDGTMPDLFS+NTFLRCL EQNLKKNPSGLVPEALNVMMEMRSY+
Sbjct: 241 QKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYS 300

Query: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360
           IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC
Sbjct: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360

Query: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL 420
           RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL
Sbjct: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL 420

Query: 421 CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNK 480
           CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQ LEESSRAEKQNK
Sbjct: 421 CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNK 480

Query: 481 AATDKSKARGKKSKNLS 497
           AATDKSKARGK+SKNLS
Sbjct: 481 AATDKSKARGKRSKNLS 497

BLAST of Cp4.1LG18g08000 vs. NCBI nr
Match: XP_022987424.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita maxima])

HSP 1 Score: 950 bits (2456), Expect = 0.0
Identity = 477/497 (95.98%), Postives = 482/497 (96.98%), Query Frame = 0

Query: 1   MFPLYIAMHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKL 60
           MFPLYIAMHAR MFDEMSLRRCVSL KLKW SFFVQSVCT HRFCSLHSTV+NG SVSKL
Sbjct: 1   MFPLYIAMHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKL 60

Query: 61  CEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD 120
           CEVVSCTIGGLDELE TLNK  VSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNH 
Sbjct: 61  CEVVSCTIGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHH 120

Query: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGL 180
           LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKM REDEALGL
Sbjct: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGL 180

Query: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240
           FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI
Sbjct: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240

Query: 241 QKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYN 300
           QKNTKEARRILKEMKSDGTMPDLFS+NTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSY+
Sbjct: 241 QKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYS 300

Query: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360
           IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC
Sbjct: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360

Query: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL 420
           RIVEEMIEEGLIPDRKFYYDLIGILCGVE EKYALELFEKMKRSSLGGYGPVYDVLIPKL
Sbjct: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKL 420

Query: 421 CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNK 480
           C GGDFEMGRQLW EAMAMG+TLRCSSDVLDPSITKVFKPTRKIDNQ LEE +RAEKQNK
Sbjct: 421 CSGGDFEMGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNK 480

Query: 481 AATDKSKARGKKSKNLS 497
           AATDKSKARGKKSKNLS
Sbjct: 481 AATDKSKARGKKSKNLS 497

BLAST of Cp4.1LG18g08000 vs. NCBI nr
Match: KAG7023207.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 910 bits (2351), Expect = 0.0
Identity = 453/472 (95.97%), Postives = 459/472 (97.25%), Query Frame = 0

Query: 8   MHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKLCEVVSCT 67
           M+ARQMFDE SLRRCVSL KLKW   FVQSVCT HRFCSLHSTV+NG SVSKLCEVVSCT
Sbjct: 1   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 60

Query: 68  IGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127
           IGGLDELE TLNK  VSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN
Sbjct: 61  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 120

Query: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGLFKNLDKY 187
           YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKM REDEALGLFKNLDKY
Sbjct: 121 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 180

Query: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247
           KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA
Sbjct: 181 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 240

Query: 248 RRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYNIAPNSIS 307
           RRILKEMKSDGTMPDLFS+NTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSY+IAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 300

Query: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367
           YNILLSCLGRARRVKESCRILETMK+TGC PDCISYYLVARVLFLSGRFGKGCRIVEEMI
Sbjct: 301 YNILLSCLGRARRVKESCRILETMKQTGCPPDCISYYLVARVLFLSGRFGKGCRIVEEMI 360

Query: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427
           EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 361 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420

Query: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQN 479
           MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQ LEES+RAEKQN
Sbjct: 421 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESNRAEKQN 472

BLAST of Cp4.1LG18g08000 vs. ExPASy TrEMBL
Match: A0A6J1E1S0 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111429800 PE=4 SV=1)

HSP 1 Score: 951 bits (2459), Expect = 0.0
Identity = 479/497 (96.38%), Postives = 484/497 (97.38%), Query Frame = 0

Query: 1   MFPLYIAMHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKL 60
           MFPLYIAM+ARQMFDE SLRRCVSL KLKW   FVQSVCT HRFCSLHSTV+NG SVSKL
Sbjct: 1   MFPLYIAMNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKL 60

Query: 61  CEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD 120
           CEVVSCTIGGLDELE TLNK  VSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD
Sbjct: 61  CEVVSCTIGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD 120

Query: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGL 180
           LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKM REDEALGL
Sbjct: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGL 180

Query: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240
           FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI
Sbjct: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240

Query: 241 QKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYN 300
           QKNTKEARRILKEMKSDGTMPDLFS+NTFLRCL EQNLKKNPSGLVPEALNVMMEMRSY+
Sbjct: 241 QKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYS 300

Query: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360
           IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC
Sbjct: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360

Query: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL 420
           RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL
Sbjct: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL 420

Query: 421 CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNK 480
           CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQ LEESSRAEKQNK
Sbjct: 421 CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNK 480

Query: 481 AATDKSKARGKKSKNLS 497
           AATDKSKARGK+SKNLS
Sbjct: 481 AATDKSKARGKRSKNLS 497

BLAST of Cp4.1LG18g08000 vs. ExPASy TrEMBL
Match: A0A6J1JIV3 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484976 PE=4 SV=1)

HSP 1 Score: 950 bits (2456), Expect = 0.0
Identity = 477/497 (95.98%), Postives = 482/497 (96.98%), Query Frame = 0

Query: 1   MFPLYIAMHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKL 60
           MFPLYIAMHAR MFDEMSLRRCVSL KLKW SFFVQSVCT HRFCSLHSTV+NG SVSKL
Sbjct: 1   MFPLYIAMHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKL 60

Query: 61  CEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHD 120
           CEVVSCTIGGLDELE TLNK  VSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNH 
Sbjct: 61  CEVVSCTIGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHH 120

Query: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGL 180
           LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKM REDEALGL
Sbjct: 121 LEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGL 180

Query: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240
           FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI
Sbjct: 181 FKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSI 240

Query: 241 QKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYN 300
           QKNTKEARRILKEMKSDGTMPDLFS+NTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSY+
Sbjct: 241 QKNTKEARRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYS 300

Query: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360
           IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC
Sbjct: 301 IAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGC 360

Query: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKL 420
           RIVEEMIEEGLIPDRKFYYDLIGILCGVE EKYALELFEKMKRSSLGGYGPVYDVLIPKL
Sbjct: 361 RIVEEMIEEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKL 420

Query: 421 CRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNK 480
           C GGDFEMGRQLW EAMAMG+TLRCSSDVLDPSITKVFKPTRKIDNQ LEE +RAEKQNK
Sbjct: 421 CSGGDFEMGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNK 480

Query: 481 AATDKSKARGKKSKNLS 497
           AATDKSKARGKKSKNLS
Sbjct: 481 AATDKSKARGKKSKNLS 497

BLAST of Cp4.1LG18g08000 vs. ExPASy TrEMBL
Match: A0A0A0LPF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1)

HSP 1 Score: 828 bits (2140), Expect = 1.35e-300
Identity = 408/487 (83.78%), Postives = 444/487 (91.17%), Query Frame = 0

Query: 8   MHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKLCEVVSCT 67
           MHAR +FDEMSLRRCVSL KLKW SF  QSVCT HRFCSLHSTV NG +VSKLCEV+SCT
Sbjct: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 68  IGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127
           IGGLDELE +LNK  +SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGLFKNLDKY 187
            AIR FAQKKDYTA++ILLS+LKKA RAMDGQTFG VAEA VKM REDEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180

Query: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 248 RRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYNIAPNSIS 307
           RRILKEMKSDGTMPDLF +NTFL+CLCE+N++KNPSGLVPE+LNVMMEMRSY I+PNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300

Query: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367
           YNILLSCL + RRVKESC+ILE MKRTGC+PDC+SYYL+ARVLFL+GRFGKG  IV+EMI
Sbjct: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360

Query: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427
           EEGL PDRKFYYDLIGILCGVE   YALELFEKMKRSSLGGYGPVYDVLIPKLCRGG+FE
Sbjct: 361 EEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420

Query: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNKAATDKSK 487
           MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE + AEKQNKAA +K K
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480

Query: 488 ARGKKSK 494
            + KK K
Sbjct: 481 EKRKKGK 487

BLAST of Cp4.1LG18g08000 vs. ExPASy TrEMBL
Match: A0A5A7US52 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002610 PE=4 SV=1)

HSP 1 Score: 825 bits (2132), Expect = 2.15e-299
Identity = 405/478 (84.73%), Postives = 438/478 (91.63%), Query Frame = 0

Query: 8   MHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKLCEVVSCT 67
           MHAR MFDEM LRRCVSL KLKW SF  QSVCT HRFCSLHSTV NG +VSKLCEV+SCT
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 68  IGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127
           IGGLDELE +LN+  +SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGLFKNLDKY 187
            AIR FAQKKDYTAI+ILLS+LKKA RAMDGQTF  VAEA VKM R+DEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 248 RRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYNIAPNSIS 307
           RRILKEMKSDGTMPDLFS+NTFL+CLCE+N++KNPSGLVPEALNVMMEMRSY IAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367
           YNILLSCL + RRVKESCRILE MKR+GCRPDC+SYYLVARVLFL+GRFGKG  IV+EMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427
           EEGL PDRKFYY+LIGILCGVE   YA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGGDFE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNKAATDK 485
           MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE + AEKQNKAA +K
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEK 478

BLAST of Cp4.1LG18g08000 vs. ExPASy TrEMBL
Match: A0A1S3BV55 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494008 PE=4 SV=1)

HSP 1 Score: 825 bits (2132), Expect = 2.15e-299
Identity = 405/478 (84.73%), Postives = 438/478 (91.63%), Query Frame = 0

Query: 8   MHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKLCEVVSCT 67
           MHAR MFDEM LRRCVSL KLKW SF  QSVCT HRFCSLHSTV NG +VSKLCEV+SCT
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 68  IGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127
           IGGLDELE +LN+  +SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGLFKNLDKY 187
            AIR FAQKKDYTAI+ILLS+LKKA RAMDGQTF  VAEA VKM R+DEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 248 RRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYNIAPNSIS 307
           RRILKEMKSDGTMPDLFS+NTFL+CLCE+N++KNPSGLVPEALNVMMEMRSY IAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367
           YNILLSCL + RRVKESCRILE MKR+GCRPDC+SYYLVARVLFL+GRFGKG  IV+EMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427
           EEGL PDRKFYY+LIGILCGVE   YA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGGDFE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNKAATDK 485
           MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE + AEKQNKAA +K
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEK 478

BLAST of Cp4.1LG18g08000 vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 577.8 bits (1488), Expect = 8.4e-165
Identity = 283/462 (61.26%), Postives = 358/462 (77.49%), Query Frame = 0

Query: 44  FCSLHSTVRNGDSVSKLCEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPN 103
           FCS H   R+  ++ ++  +VS  +GGLD+LE  LN+  VS +S+LVTQVI+SCKNE   
Sbjct: 24  FCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSP 83

Query: 104 RRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGL 163
           RRLLRFFSWS K L   L D++FNY +R+ A+KKD+TA+ ILLSDL+K  RAMD QTF +
Sbjct: 84  RRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSI 143

Query: 164 VAEALVKMGREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKI 223
           VAE LVK+G+E++A+G+FK LDK+ CP D FTVTAII+ALC++GH KRA GV+ HHKD I
Sbjct: 144 VAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVI 203

Query: 224 SGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPS 283
           SG    +YRSLL+GWS+Q+N KEARR++++MKS G  PDLF FN+ L CLCE+N+ +NPS
Sbjct: 204 SGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPS 263

Query: 284 GLVPEALNVMMEMRSYNIAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISY 343
           GLVPEALN+M+EMRSY I P S+SYNILLSCLGR RRV+ESC+ILE MKR+GC PD  SY
Sbjct: 264 GLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSY 323

Query: 344 YLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKR 403
           Y V RVL+L+GRFGKG +IV+EMIE G  P+RKFYYDLIG+LCGVE   +AL+LFEKMKR
Sbjct: 324 YFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKR 383

Query: 404 SSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTR- 463
           SS+GGYG VYD+LIPKLC+GG+FE GR+LWEEA+++ +TL CS  +LDPS+T+VFKP + 
Sbjct: 384 SSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCSISLLDPSVTEVFKPMKM 443

Query: 464 -----KIDNQ--GLEESSRAEKQNKAATDKSKARGK-KSKNL 497
                 +D +   L+  +R  K       K K R K K KNL
Sbjct: 444 KEEAAMVDRRALNLKIHARMNKTKPKLKLKPKRRSKTKKKNL 485

BLAST of Cp4.1LG18g08000 vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 1.3e-43
Identity = 105/377 (27.85%), Postives = 188/377 (49.87%), Query Frame = 0

Query: 104 RRLLRFFSWSLKKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGL 163
           R  L F  W     N    DE  ++ +  F ++KD+     +L  + K +    G+T   
Sbjct: 124 RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG---MLEIISKYKGIAGGKTLES 183

Query: 164 VAEALVKMGREDEALGLFKNLDK-YKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDK 223
             + LV+ GR  +    F+ ++  Y    D+ ++T ++  LC KGHA  AE +V +  ++
Sbjct: 184 AIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE 243

Query: 224 ISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNP 283
           I    + I   L+ GW I +   EA R+  EM   G      ++N  L C+C+   KK+P
Sbjct: 244 IFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDP 303

Query: 284 SGLVPEALNVMMEMRSYNIAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCIS 343
             L PE   V++EM    +  N+ ++N+L++ L + RR +E+  +   M   GC+PD  +
Sbjct: 304 FKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAET 363

Query: 344 YYLVARVLFLSGRFGKGCRIVEEMIEEGL--IPDRKFYYDLIGILCGVESEKYALELFEK 403
           Y ++ R L+ + R G+G  ++++M   G   + ++K YY  + ILCG+E  ++A+ +F+ 
Sbjct: 364 YLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKS 423

Query: 404 MKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKP 463
           MK +        YD+L+ K+C          L++EA   G+ +      +DP   K  K 
Sbjct: 424 MKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMK--KK 483

Query: 464 TRKIDNQGLEESSRAEK 478
           T+++D+   +  +  EK
Sbjct: 484 TKEVDSNVKKRETLPEK 494

BLAST of Cp4.1LG18g08000 vs. TAIR 10
Match: AT1G74900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 5.7e-28
Identity = 101/413 (24.46%), Postives = 179/413 (43.34%), Query Frame = 0

Query: 34  FVQSVCTGHRFCSLHSTVRNGDSVSKLCEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQV 93
           F +S+CT     +L     +  +++KL  ++S       + +  L+      T +LV  V
Sbjct: 5   FSKSLCTSAAGANLKPPPADSAAIAKL--ILSSPNTTHQDDQFLLSTKTTPWTPNLVNSV 64

Query: 94  IDSCKNEAPNRRLLRFFSWSLKKLNHDLED-EDFNYAIRLFAQKKDYTAIDILLSDLKKA 153
           +    N  P  + L+FF +        + D   F+ AI + A+   +  +  L+  ++  
Sbjct: 65  LKRLWNHGP--KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSL 124

Query: 154 RRAMDGQTFGLVAEALVKMGREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRA 213
           R     +TF +VAE     G+ D+A+ LF N+ ++ C  D  +   I+  LC     ++A
Sbjct: 125 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 184

Query: 214 EGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRC 273
             +    + + S   +  Y  +L GW + K T +A  +LKEM   G  P+L ++NT L+ 
Sbjct: 185 YELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKG 244

Query: 274 L--------------------CEQNLKK--------NPSGLVPEALNVMMEMRSYNIAPN 333
                                CE ++            +G +  A NV  EM    + P+
Sbjct: 245 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 304

Query: 334 SISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVE 393
             +YN ++  L +   V+ +  + E M R G  P+  +Y ++ R LF +G F +G  +++
Sbjct: 305 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 364

Query: 394 EMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLI 418
            M  EG  P+ + Y  +I         + AL LFEKM           Y++LI
Sbjct: 365 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412

BLAST of Cp4.1LG18g08000 vs. TAIR 10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 4.1e-26
Identity = 84/372 (22.58%), Postives = 168/372 (45.16%), Query Frame = 0

Query: 55  DSVSKLCEVVSCTIGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSL 114
           + + K+C+ ++      +++   L+K  V +T SLV QV+    N     +   FF W+ 
Sbjct: 100 EDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGW--NQAYGFFIWAN 159

Query: 115 KKLNHDLEDEDFNYAIRLFAQKKDYTAIDILLSDLKK--ARRAMDGQTFGLVAEALVKMG 174
            +  +      +N  + +  + +++  +  L++++ K    + +   T   V   L K G
Sbjct: 160 SQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSG 219

Query: 175 REDEALGLFKNLDK-YKCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIY 234
           + ++A+  F  ++K Y    D   + +++ AL  +   + A  V L   D I    +  +
Sbjct: 220 KYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPD-ARTF 279

Query: 235 RSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALN 294
             L++G+   +   +AR ++  MK     PD+ ++ +F+   C++       G       
Sbjct: 280 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE-------GDFRRVNE 339

Query: 295 VMMEMRSYNIAPNSISYNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLF 354
           ++ EMR     PN ++Y I++  LG++++V E+  + E MK  GC PD   Y  +  +L 
Sbjct: 340 MLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 399

Query: 355 LSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGP 414
            +GRF     I E+M  +G+  D   Y  +I        ++ AL L ++M+        P
Sbjct: 400 KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSP 459

Query: 415 VYDVLIP--KLC 422
             +   P  K+C
Sbjct: 460 NVETYAPLLKMC 461

BLAST of Cp4.1LG18g08000 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 3.5e-25
Identity = 80/328 (24.39%), Postives = 145/328 (44.21%), Query Frame = 0

Query: 157 DGQTFGLVAEALVKMGREDEALGLFKNLDKYKCPHDQFTVTAIITALCAKGHAKRAEGVV 216
           D  T+  V   L K+G   EA+ +   +    C  +  T   +I+ LC +   + A  + 
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388

Query: 217 LHHKDKISGTMSCIYRSLLYGWSIQKNTKEARRILKEMKSDGTMPDLFSFNTFLRCLCEQ 276
                K      C + SL+ G  + +N + A  + +EM+S G  PD F++N  +  LC +
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448

Query: 277 NLKKNPSGLVPEALNVMMEMRSYNIAPNSISYNILLSCLGRARRVKESCRILETMKRTGC 336
                  G + EALN++ +M     A + I+YN L+    +A + +E+  I + M+  G 
Sbjct: 449 -------GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 508

Query: 337 RPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIPDRKFYYDLIGILCGVESEKYALE 396
             + ++Y  +   L  S R     +++++MI EG  PD+  Y  L+   C     K A +
Sbjct: 509 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 568

Query: 397 LFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLTLRCSSDVLDPSITK 456
           + + M  +        Y  LI  LC+ G  E+  +L       G+ L  +    +P I  
Sbjct: 569 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL--TPHAYNPVIQG 628

Query: 457 VFKPTRKIDNQGLEESSRAEKQNKAATD 485
           +F+  ++   + +       +QN+A  D
Sbjct: 629 LFR--KRKTTEAINLFREMLEQNEAPPD 645

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FLJ61.2e-16361.26Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop... [more]
Q9FME41.8e-4227.85Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t... [more]
Q9S7R48.0e-2724.46Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop... [more]
Q9LUJ45.7e-2522.58Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... [more]
Q9LFF14.9e-2424.39Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
XP_023516447.10.0100.00pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... [more]
XP_022921576.10.096.38pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... [more]
KAG6589519.10.096.38Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022987424.10.095.98pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... [more]
KAG7023207.10.095.97Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
A0A6J1E1S00.096.38pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit... [more]
A0A6J1JIV30.095.98pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit... [more]
A0A0A0LPF41.35e-30083.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1[more]
A0A5A7US522.15e-29984.73Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BV552.15e-29984.73pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis ... [more]
Match NameE-valueIdentityDescription
AT5G61370.18.4e-16561.26Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G60960.11.3e-4327.85Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G74900.15.7e-2824.46Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G22670.14.1e-2622.58Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.13.5e-2524.39Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 303..343
e-value: 2.6E-8
score: 33.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 160..186
e-value: 0.83
score: 10.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 306..340
e-value: 4.2E-9
score: 34.0
coord: 342..374
e-value: 0.0012
score: 16.9
coord: 230..262
e-value: 0.001
score: 17.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 231..271
e-value: 7.8E-5
score: 22.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 304..338
score: 12.287675
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 339..373
score: 8.801982
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 227..330
e-value: 1.9E-20
score: 75.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 66..222
e-value: 5.9E-13
score: 50.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 331..496
e-value: 5.4E-16
score: 60.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..491
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..497
NoneNo IPR availablePANTHERPTHR47938:SF9PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIALcoord: 42..489
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 42..489

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g08000.1Cp4.1LG18g08000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding