Cp4.1LG18g07860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g07860
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor TCP14-like
Location	Cp4.1LG18: 7484052 .. 7484771 (+)
RNA-Seq Expression	Cp4.1LG18g07860
Synteny	Cp4.1LG18g07860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTCCCTTCGCAGCTTCGGTCATCTTCCTATTACAACCCTAATTTCTCCCTGCATCAACCACGCCGAACGCTCTTCCCGGGATTCGGTCTCTCATCCGAACCCTCCTCCACCGCTCTCCTCAATTTCCAGTCCACCAACATCGGCAACTCTCTACTCCAAGCCAAACCTGAACTCAGAGACAACACTACCTCTTCATTAGACCTCTCCGACGCAGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCCACGGAGCAGGAGTTGTCGTCGTCGTCGTCGTCGCAGCATCAAATGGGAGGGTATCTGCTACAATCAAGTGCAGGGTCGATTCCAGCGAGCCACGGAGGAGGTCAGGTTCCGGCGAATTTTTGGATGCTTACAAATACAAATAACCAAGTGATGGGGGGTGATCCTATATGGACGTTTCCATCGGTTAATAACAGCGGGTTGTACAGAGGGACGATGTCTAGTGGGTTACATTTCATGAACTTCCCAGCCCCAGTCGCGCTAGTGCCAGGTCAGCAATTTGGTTCCGGCGCCGGCGGAGGGAATCATAGTTCCAGTGAGGGACACTTGAATATACTCGCTGGTCTCAATCCGTATCGCTCGGTTTCCACCACCGGCATCATGGAACAACAGGGAAGTGGATCGCACTCACATCACGGCGGCGGTGGAGATGATCGCCATGATTCAACCAGCCACCACTCATAA

mRNA sequence

ATGTCTGTCCCTTCGCAGCTTCGGTCATCTTCCTATTACAACCCTAATTTCTCCCTGCATCAACCACGCCGAACGCTCTTCCCGGGATTCGGTCTCTCATCCGAACCCTCCTCCACCGCTCTCCTCAATTTCCAGTCCACCAACATCGGCAACTCTCTACTCCAAGCCAAACCTGAACTCAGAGACAACACTACCTCTTCATTAGACCTCTCCGACGCAGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCCACGGAGCAGGAGTTGTCGTCGTCGTCGTCGTCGCAGCATCAAATGGGAGGGTATCTGCTACAATCAAGTGCAGGGTCGATTCCAGCGAGCCACGGAGGAGGTCAGGTTCCGGCGAATTTTTGGATGCTTACAAATACAAATAACCAAGTGATGGGGGGTGATCCTATATGGACGTTTCCATCGGTTAATAACAGCGGGTTGTACAGAGGGACGATGTCTAGTGGGTTACATTTCATGAACTTCCCAGCCCCAGTCGCGCTAGTGCCAGGTCAGCAATTTGGTTCCGGCGCCGGCGGAGGGAATCATAGTTCCAGTGAGGGACACTTGAATATACTCGCTGGTCTCAATCCGTATCGCTCGGTTTCCACCACCGGCATCATGGAACAACAGGGAAGTGGATCGCACTCACATCACGGCGGCGGTGGAGATGATCGCCATGATTCAACCAGCCACCACTCATAA

Coding sequence (CDS)

ATGTCTGTCCCTTCGCAGCTTCGGTCATCTTCCTATTACAACCCTAATTTCTCCCTGCATCAACCACGCCGAACGCTCTTCCCGGGATTCGGTCTCTCATCCGAACCCTCCTCCACCGCTCTCCTCAATTTCCAGTCCACCAACATCGGCAACTCTCTACTCCAAGCCAAACCTGAACTCAGAGACAACACTACCTCTTCATTAGACCTCTCCGACGCAGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCCACGGAGCAGGAGTTGTCGTCGTCGTCGTCGTCGCAGCATCAAATGGGAGGGTATCTGCTACAATCAAGTGCAGGGTCGATTCCAGCGAGCCACGGAGGAGGTCAGGTTCCGGCGAATTTTTGGATGCTTACAAATACAAATAACCAAGTGATGGGGGGTGATCCTATATGGACGTTTCCATCGGTTAATAACAGCGGGTTGTACAGAGGGACGATGTCTAGTGGGTTACATTTCATGAACTTCCCAGCCCCAGTCGCGCTAGTGCCAGGTCAGCAATTTGGTTCCGGCGCCGGCGGAGGGAATCATAGTTCCAGTGAGGGACACTTGAATATACTCGCTGGTCTCAATCCGTATCGCTCGGTTTCCACCACCGGCATCATGGAACAACAGGGAAGTGGATCGCACTCACATCACGGCGGCGGTGGAGATGATCGCCATGATTCAACCAGCCACCACTCATAA

Protein sequence

MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPELRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGGQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGSGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS

Homology

[Close]

BLAST of Cp4.1LG18g07860 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.5e-18
Identity = 91/280 (32.50%), Postives = 126/280 (45.00%), Query Frame = 0


Query: 12  YYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPELRDNTTSSLDLS 71
           +++P+     P  +LFP  G+ +   +T+ LNF +           P  ++    S    
Sbjct: 233 FHHPHLQGRAPTSSLFP--GIDNFTPTTSFLNFHN-----------PTKQEGDQDS---- 292

Query: 72  DAAEEISIGRKRRPSTEQEL-SSSSSSQH-QMGGYLLQSS-AGSIPASHGGGQVPANFWM 131
              EE++  +KRR  T  +L       QH Q+GGY LQSS +GS   +    Q+P NFWM
Sbjct: 293 ---EELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNSGSTATAAAAQQIPGNFWM 352

Query: 132 LT---------NTNNQV------------MGGDPIWTFPSVNN----------SGLYRGT 191
           +            NNQ              GG+P+WTFPS+N           SG+  G 
Sbjct: 353 VAAAAAAGGGGGNNNQTGGLMTASIGTGGGGGEPVWTFPSINTAAAALYRSGVSGVPSGA 412

Query: 192 MSSGLHFMNFPAPVALVPGQQ------------------FGSGAGGGNHSSS-------- 231
           +SSGLHFMNF AP+A + GQQ                   G   GGG+H ++        
Sbjct: 413 VSSGLHFMNFAAPMAFLTGQQQLATTSNHEINEDSNNNEGGRSDGGGDHHNTQRHHHHQQ 472

[Close]

BLAST of Cp4.1LG18g07860 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.9e-14
Identity = 71/177 (40.11%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 84  RPSTEQELSSSSSSQ----HQMGGYLLQSSAGSIPASHGGGQVPANFWML-TNTNNQVMG 143
           RP  E   SSSSSSQ    +QMG YL+QS+AGS+P S      P  FW    NT N    
Sbjct: 162 RPKNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQSPATAP--FWSSGDNTQN---- 221

Query: 144 GDPIWTFP-SVNNSGLYRGTM----------SSGLHFMNFPAPVALVPGQQFGSGAGGGN 203
              +W F  + ++SG+  G +           SG+H MNF AP+AL  GQ   SG GGG 
Sbjct: 222 ---LWAFNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALFSGQPLASGYGGGG 281

Query: 204 HSSSE-GHLNILAGLN-PYRSVSTTG---IMEQQGSGSHSHHGGGGDDRHDSTSHHS 240
               E  H  +LA LN  YR V+ TG     +Q   G H H+         STSHHS
Sbjct: 282 GGGGEHSHYGVLAALNAAYRPVAETGNHNNNQQNRDGDHHHN----HQEDGSTSHHS 325

[Close]

BLAST of Cp4.1LG18g07860 vs. NCBI nr
Match: XP_023516074.1 (transcription factor TCP14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 470 bits (1210), Expect = 1.12e-164
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL
Sbjct: 154 MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 213

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG
Sbjct: 214 RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 273

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG
Sbjct: 274 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 333

Query: 181 SGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 239
           SGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS
Sbjct: 334 SGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 392

[Close]

BLAST of Cp4.1LG18g07860 vs. NCBI nr
Match: XP_022921393.1 (transcription factor TCP14-like [Cucurbita moschata] >KAG6589503.1 Transcription factor TCP14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 468 bits (1203), Expect = 1.17e-163
Identity = 238/239 (99.58%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL
Sbjct: 151 MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 210

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG
Sbjct: 211 RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 270

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG
Sbjct: 271 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 330

Query: 181 SGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 239
           SGAGGGN+SSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS
Sbjct: 331 SGAGGGNNSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 389

[Close]

BLAST of Cp4.1LG18g07860 vs. NCBI nr
Match: KAG7023189.1 (Transcription factor TCP14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 467 bits (1201), Expect = 2.36e-163
Identity = 237/239 (99.16%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL
Sbjct: 151 MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 210

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDNTTSSLDLSDAAEEISIGRKRRPSTEQE+SSSSSSQHQMGGYLLQSSAGSIPASHGGG
Sbjct: 211 RDNTTSSLDLSDAAEEISIGRKRRPSTEQEMSSSSSSQHQMGGYLLQSSAGSIPASHGGG 270

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG
Sbjct: 271 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 330

Query: 181 SGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 239
           SGAGGGN+SSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS
Sbjct: 331 SGAGGGNNSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 389

[Close]

BLAST of Cp4.1LG18g07860 vs. NCBI nr
Match: XP_022987192.1 (transcription factor TCP14-like [Cucurbita maxima])

HSP 1 Score: 457 bits (1176), Expect = 2.13e-159
Identity = 235/239 (98.33%), Postives = 237/239 (99.16%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSE SSTALLNFQS+NIGNSLLQAKPEL
Sbjct: 162 MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSESSSTALLNFQSSNIGNSLLQAKPEL 221

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMGGYLLQSSAGSIPASHGGG
Sbjct: 222 RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGGYLLQSSAGSIPASHGGG 281

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG
Sbjct: 282 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 341

Query: 181 SGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 239
           SGAGGGN+SSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS
Sbjct: 342 SGAGGGNNSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 399

[Close]

BLAST of Cp4.1LG18g07860 vs. NCBI nr
Match: XP_008453196.1 (PREDICTED: transcription factor TCP14 [Cucumis melo])

HSP 1 Score: 411 bits (1057), Expect = 3.69e-141
Identity = 220/248 (88.71%), Postives = 225/248 (90.73%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 164 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 223

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMGGYLLQSS G+IPASHGG
Sbjct: 224 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGGYLLQSSTGTIPASHGG 283

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 284 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 343

Query: 181 GSGAGGG--------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDR 239
           GS  GGG        N SS+EGHLNILAGLNPYRSVS TG+ME QGSGS SHHGGGGDDR
Sbjct: 344 GSSTGGGSNNNNNNNNSSSTEGHLNILAGLNPYRSVSNTGVMEPQGSGSQSHHGGGGDDR 403

[Close]

BLAST of Cp4.1LG18g07860 vs. ExPASy TrEMBL
Match: A0A6J1E3T0 (transcription factor TCP14-like OS=Cucurbita moschata OX=3662 GN=LOC111429686 PE=4 SV=1)

HSP 1 Score: 468 bits (1203), Expect = 5.66e-164
Identity = 238/239 (99.58%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL
Sbjct: 151 MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 210

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG
Sbjct: 211 RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 270

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG
Sbjct: 271 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 330

Query: 181 SGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 239
           SGAGGGN+SSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS
Sbjct: 331 SGAGGGNNSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 389

[Close]

BLAST of Cp4.1LG18g07860 vs. ExPASy TrEMBL
Match: A0A6J1J9P7 (transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111484815 PE=4 SV=1)

HSP 1 Score: 457 bits (1176), Expect = 1.03e-159
Identity = 235/239 (98.33%), Postives = 237/239 (99.16%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSE SSTALLNFQS+NIGNSLLQAKPEL
Sbjct: 162 MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSESSSTALLNFQSSNIGNSLLQAKPEL 221

Query: 61  RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 120
           RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMGGYLLQSSAGSIPASHGGG
Sbjct: 222 RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGGYLLQSSAGSIPASHGGG 281

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG
Sbjct: 282 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 341

Query: 181 SGAGGGNHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 239
           SGAGGGN+SSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS
Sbjct: 342 SGAGGGNNSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDRHDSTSHHS 399

[Close]

BLAST of Cp4.1LG18g07860 vs. ExPASy TrEMBL
Match: A0A5A7T0G2 (Transcription factor TCP14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002480 PE=4 SV=1)

HSP 1 Score: 411 bits (1057), Expect = 1.79e-141
Identity = 220/248 (88.71%), Postives = 225/248 (90.73%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 164 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 223

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMGGYLLQSS G+IPASHGG
Sbjct: 224 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGGYLLQSSTGTIPASHGG 283

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 284 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 343

Query: 181 GSGAGGG--------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDR 239
           GS  GGG        N SS+EGHLNILAGLNPYRSVS TG+ME QGSGS SHHGGGGDDR
Sbjct: 344 GSSTGGGSNNNNNNNNSSSTEGHLNILAGLNPYRSVSNTGVMEPQGSGSQSHHGGGGDDR 403

[Close]

BLAST of Cp4.1LG18g07860 vs. ExPASy TrEMBL
Match: A0A1S3BVN4 (transcription factor TCP14 OS=Cucumis melo OX=3656 GN=LOC103493985 PE=4 SV=1)

HSP 1 Score: 411 bits (1057), Expect = 1.79e-141
Identity = 220/248 (88.71%), Postives = 225/248 (90.73%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 164 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 223

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMGGYLLQSS G+IPASHGG
Sbjct: 224 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGGYLLQSSTGTIPASHGG 283

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 284 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 343

Query: 181 GSGAGGG--------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGGDDR 239
           GS  GGG        N SS+EGHLNILAGLNPYRSVS TG+ME QGSGS SHHGGGGDDR
Sbjct: 344 GSSTGGGSNNNNNNNNSSSTEGHLNILAGLNPYRSVSNTGVMEPQGSGSQSHHGGGGDDR 403

[Close]

BLAST of Cp4.1LG18g07860 vs. ExPASy TrEMBL
Match: A0A0A0LRN4 (Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G009680 PE=4 SV=1)

HSP 1 Score: 407 bits (1045), Expect = 4.05e-141
Identity = 220/251 (87.65%), Postives = 227/251 (90.44%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTA-LLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTA LLNFQSTNIGNSLLQAKPE
Sbjct: 63  MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 122

Query: 61  LRDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGG 120
           +RD T SSLDLSDAAEEISIGRKRRPSTEQELSSSSS QHQMG YLLQSS G+IPASHGG
Sbjct: 123 IRD-TPSSLDLSDAAEEISIGRKRRPSTEQELSSSSS-QHQMGSYLLQSSTGTIPASHGG 182

Query: 121 GQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 180
            QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF
Sbjct: 183 AQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQF 242

Query: 181 GSGAGGG---------NHSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHGGGG-- 239
           GSG GGG         N+SSSEGHLNILAGLNPYRSVS++G+ME QGSGS SHHGGGG  
Sbjct: 243 GSGTGGGSNNNNNNNNNNSSSEGHLNILAGLNPYRSVSSSGVMEPQGSGSQSHHGGGGGG 302

[Close]

BLAST of Cp4.1LG18g07860 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 92.0 bits (227), Expect = 6.8e-19
Identity = 91/280 (32.50%), Postives = 126/280 (45.00%), Query Frame = 0


Query: 12  YYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPELRDNTTSSLDLS 71
           +++P+     P  +LFP  G+ +   +T+ LNF +           P  ++    S    
Sbjct: 233 FHHPHLQGRAPTSSLFP--GIDNFTPTTSFLNFHN-----------PTKQEGDQDS---- 292

Query: 72  DAAEEISIGRKRRPSTEQEL-SSSSSSQH-QMGGYLLQSS-AGSIPASHGGGQVPANFWM 131
              EE++  +KRR  T  +L       QH Q+GGY LQSS +GS   +    Q+P NFWM
Sbjct: 293 ---EELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNSGSTATAAAAQQIPGNFWM 352

Query: 132 LT---------NTNNQV------------MGGDPIWTFPSVNN----------SGLYRGT 191
           +            NNQ              GG+P+WTFPS+N           SG+  G 
Sbjct: 353 VAAAAAAGGGGGNNNQTGGLMTASIGTGGGGGEPVWTFPSINTAAAALYRSGVSGVPSGA 412

Query: 192 MSSGLHFMNFPAPVALVPGQQ------------------FGSGAGGGNHSSS-------- 231
           +SSGLHFMNF AP+A + GQQ                   G   GGG+H ++        
Sbjct: 413 VSSGLHFMNFAAPMAFLTGQQQLATTSNHEINEDSNNNEGGRSDGGGDHHNTQRHHHHQQ 472

[Close]

BLAST of Cp4.1LG18g07860 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15
Identity = 71/177 (40.11%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 84  RPSTEQELSSSSSSQ----HQMGGYLLQSSAGSIPASHGGGQVPANFWML-TNTNNQVMG 143
           RP  E   SSSSSSQ    +QMG YL+QS+AGS+P S      P  FW    NT N    
Sbjct: 162 RPKNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQSPATAP--FWSSGDNTQN---- 221

Query: 144 GDPIWTFP-SVNNSGLYRGTM----------SSGLHFMNFPAPVALVPGQQFGSGAGGGN 203
              +W F  + ++SG+  G +           SG+H MNF AP+AL  GQ   SG GGG 
Sbjct: 222 ---LWAFNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALFSGQPLASGYGGGG 281

Query: 204 HSSSE-GHLNILAGLN-PYRSVSTTG---IMEQQGSGSHSHHGGGGDDRHDSTSHHS 240
               E  H  +LA LN  YR V+ TG     +Q   G H H+         STSHHS
Sbjct: 282 GGGGEHSHYGVLAALNAAYRPVAETGNHNNNQQNRDGDHHHN----HQEDGSTSHHS 325

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g07860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z00	9.5e-18	32.50	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9C9L2	2.9e-14	40.11	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]

BLAST of Cp4.1LG18g07860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516074.1	1.12e-164	100.00	transcription factor TCP14-like [Cucurbita pepo subsp. pepo]	[more]
XP_022921393.1	1.17e-163	99.58	transcription factor TCP14-like [Cucurbita moschata] >KAG6589503.1 Transcription...	[more]
KAG7023189.1	2.36e-163	99.16	Transcription factor TCP14, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022987192.1	2.13e-159	98.33	transcription factor TCP14-like [Cucurbita maxima]	[more]
XP_008453196.1	3.69e-141	88.71	PREDICTED: transcription factor TCP14 [Cucumis melo]	[more]

BLAST of Cp4.1LG18g07860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E3T0	5.66e-164	99.58	transcription factor TCP14-like OS=Cucurbita moschata OX=3662 GN=LOC111429686 PE...	[more]
A0A6J1J9P7	1.03e-159	98.33	transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111484815 PE=4...	[more]
A0A5A7T0G2	1.79e-141	88.71	Transcription factor TCP14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BVN4	1.79e-141	88.71	transcription factor TCP14 OS=Cucumis melo OX=3656 GN=LOC103493985 PE=4 SV=1	[more]
A0A0A0LRN4	4.05e-141	87.65	Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G009680 PE=4 SV=1	[more]

BLAST of Cp4.1LG18g07860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47620.1	6.8e-19	32.50	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G69690.1	2.0e-15	40.11	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..239
None	No IPR available	PANTHER	PTHR31072:SF174	TRANSCRIPTION FACTOR TCP14-LIKE	coord: 1..238
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 1..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g07860.1	Cp4.1LG18g07860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding