Cp4.1LG18g07210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g07210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	COBRA-like protein
Location	Cp4.1LG18: 7039262 .. 7042664 (-)
RNA-Seq Expression	Cp4.1LG18g07210
Synteny	Cp4.1LG18g07210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATCAATACCCACAGTAATATGTTACACAAAATTCTCTGTCGACAGCAAAAAATTGCAGTTTTAGCACTTCTGATCTTTACAGCTTTCTATTCAGCTGGTACGTGCTTGTTTAACTGCTAAAACAAGAAAGAACTTACATTCTCTTCGTGTTGTAGCTAATCTTTACAGCTTTCTATTCAGGGGCTTACGATCCATTGGATCCAAATGGAAACATAACAATCAAATGGGATATAGTATCTTGGACGGCAGATGGATATGTTGTAAGATTGTGAAACAGGATCGCTGGCGTAAAGCTATTTTTAAATACTGACCTTAAGATCTTTTTTGAACTGCAACAGGCTGCAGTGACAATGAATAATTTTCAGATGTACCGCCATATTAATGCACCAGGATGGACTCTAGGCTGGTCGTGGGCCAAGAAAGAAGTAATATGGTCGATGGTGGGAGCTCAGACAACAGAGCAAGGAGATTGTTCCAAGTTCAAAGGAAATGTGCCTCACTGCTGCAAGAAAACCCCAGTAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAATCAGCAATTCTCCAATTGCTGCAAGGGTGGAGTATTGGCATCTTGGGGACAGGATCCAGTAGGTTCGGTCTCCGCCTTTCAGGTGAGTGTTGGGCTAGCCGGCACTTCAAACAAAACTGTGAAATTGCCAAAGAACTTCACCCTGCTCGGTCCAGGACCAGGCTACACATGTGGACCTGCAAAGGTTGTGCCTTCTACAGTCTTCCTCACTCCTGATCGCCGCCGGAAAACTCNTTTTTTTTTTTTTTTTTTTTTTTTTTTGCATCCTCGTGAAGTTGATTCATGCTCCATCTAATGCAGTGACATGGAATGTAACCTGCACTTACTCACAATTTCTGGCCTCTAAGAACCCAACTTGCTGCGTATCACTTTCAACTTTCTACAATGAGACGATCACCTCTTGCCCAACCTGCGCCTGTGGCTGCCAACACAAACATAATTGTATAAAGTAAGGCTTCTTTCTCTACTCCAGATGGTAACAAACGTGTTTCATGAATCACTCAAGCATAAAAATAAATCAAATTAAAAAGAAAAATAACGGGTTTGGCACTCATGCGTTCCTTGATCCTAAAATAGATCACATTTCCTTGGTCAGATCAGAACCTCTGTCCTTGGAATAGCTATACCATGACTGTAGTCTGCAGTATAAAAATTAATATACTTACAACATCAGATTCTTAGAATAGGAAACCTTCTTGTTGTCTGATGAGAAGGAACCGTAACCTTGTGTCAGGTGTTGTGACAGTCCAAGCTCACCGCTAGCAAATATTGTCCTCTTTAGGCTTTCCCTTAAGGATTTTAAAACGCGTCTACTAGAGAGAGACTTCCACACTCTTATAAAGAATATATTTTGTTCCCCTCTCCAACCGATATAGGATCCCACAATCCACCACCTTGAGGACCAGCATCTCTGCTGACATACCGTCCAGTGTCTGGCTTTAAAAACTTTGGGGGAAAACTCGAAATGGTAAGCCAAAATAGGACAATATTTGCTAGCAATTAGCTTGGGCTGTTACAAGAAACCTTCTTGTTGTCCGATCAGAAGGAACCGTAAACTTGTGTCAGATGTCTTTAACGTTACTTTTCAACTAATTTACTCATCTTCAGCATAGTTGCTAGAGATCATAACTACATCTTTTTTCCTTTAATCCCACTATGCAGGAGTGACTCAAAGCTATTGCACAAGGAAGGAATAAACACTCCTAAAAAGGATAACACACCTTTACTACAATGCACTCATCACATGTGTCCTATTCGAGTACACTGGCACGTAAAGATTAATTACAAGGATTACTGGCGTGTGAAGGTTGCTGTCACTAACTTCAACTATAGGATGAACTATACACTGTGGACACTGGCAGTGCAGCATCCAAATCTGAACAATGTAACTCAAGTCTTTAGTTTTGACTACAAGCCCCTTGTTCCCTATGAATCCATCAGTGAGTACGAAAATCCTTATACTTTCAATGTAAATGTAAGGTTATTATCTAAGTCTTTACTGACATAACTGCACTACAAAATTCAATGTGCAGACGATACCGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTACAATCTGAAGTACTAATGAAGAAGGATAAGGATACCTTTACCTTCAAGCAGGGTTGGGCATTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCACCAGAATCATACCCGTTTCTACCCAACTCTGCGCCTGGAGGGTCGAGTGCAGTAGCCAAATTCACCGCCACTTTGCTTTTGATACTCTGGTTTTTGTTGTAATCAGTGGTCATTCTTCTCGTGCCTGATGAACTTCAAAGATCTGCACATGTTCAAAATTCAAGAGAAAAACTGCAGAACTACAATGAACACAGGTATGCATGCAGATATTATTGGTCATAGAATACATATATACTCGGCAGATAAATCAATGTTTGTTGTTTCTGAGTTGTCTGAAGTCAACTATCTTGAGTAAAAATATCCTCTGTTACCAGTGTGCTTCACAAGAAATTCAGCATAGACGTGATTCGATAGTCCAAATCCTATTTTTTGTTTTGTAATACATAGTCTGGTTTAAATGAAATTATTCCATCATGTTCCACTAACTTAAATAACCAAGAAATTATGCAGAAAACAGGCACTCTATGGAAAATTTGAACTGTCTCATAAGTTATTACATCGAGCGACCAATATTTTGTAACCATTATACAAACAAAATGATTGAACATGTAAAATAGCTATTTGTACAACACAATTCGCTCCAAATCTAAACAAAAATGAAGTTGAACCAAATAACCGATCCACAAACAGGAACTAGCTCATATTGCCTTTGATTTAAGCACCAGTAGAATCGACACTAAAGACTAGATTGCTACAAGCTCGTGGGAAATCTAGAGTGTCAGAGCGACCATAGCGTTTGTTGTTCCCCGTAGACGTAACTTATTGTGCAAAATTCAACAGTAATGTCAAAGATATTAAGATGGTCATAAGTAGAGATATAGCTGGTCTGGAACTGGCATTTGGCAAATAAGGATAGGCATCTGGAGGTGGCAGCACACAGTTATCACCATTGAAATAAACTCTTCTTGGAAAAGCCCAACCCTTGTCGAAAGTGAAAGTGTTCTGGTCTTTCTGAAATAGGAGCTCAGATTGCACATTACCAAGAGGGCCAGCTTGATTGAGCAGATCATTGTAGAACTTAACTCCCCACAACATCGCAGTATCATCTGCAGAACAGTACCATAGTTACCAGCCACTAAGTTGAGAAATAAATTGTATAATGCCGGTTCTTTCCGGTCAACATTATATCA

mRNA sequence

ATGGAAATCAATACCCACAGTAATATGTTACACAAAATTCTCTGTCGACAGCAAAAAATTGCAGTTTTAGCACTTCTGATCTTTACAGCTTTCTATTCAGCTGGGGCTTACGATCCATTGGATCCAAATGGAAACATAACAATCAAATGGGATATAGTATCTTGGACGGCAGATGGATATGTTGCTGCAGTGACAATGAATAATTTTCAGATGTACCGCCATATTAATGCACCAGGATGGACTCTAGGCTGGTCGTGGGCCAAGAAAGAAGTAATATGGTCGATGGTGGGAGCTCAGACAACAGAGCAAGGAGATTGTTCCAAGTTCAAAGGAAATGTGCCTCACTGCTGCAAGAAAACCCCAGTAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAATCAGCAATTCTCCAATTGCTGCAAGGGTGGAGTATTGGCATCTTGGGGACAGGATCCAGTAGACGATACCGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTACAATCTGAAGTACTAATGAAGAAGGATAAGGATACCTTTACCTTCAAGCAGGGTTGGGCATTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCACCAGAATCATACCCGTTTCTACCCAACTCTGCGCCTGGAGGGTCGAGTGCAGTAGCCAAATTCACCGCCACTTTGCTTTTGATACTCTGGTTTTTGTTGTAATCAGTGGTCATTCTTCTCGTGCCTGATGAACTTCAAAGATCTGCACATGTTCAAAATTCAAGAGAAAAACTGCAGAACTACAATGAACACAGGTATGCATGCAGATATTATTGGTCATAGAATACATATATACTCGGCAGATAAATCAATGTTTTGTGCTTCACAAGAAATTCAGCATAGACGTGATTCGATAGTCCAAATCCTATTTTTTGTTTTGTAATACATAGTCTGGTTTAAATGAAATTATTCCATCATGTTCCACTAACTTAAATAACCAAGAAATTATGCAGAAAACAGGCACTCTATGGAAAATTTGAACTGTCTCATAAGTTATTACATCGAGCGACCAATATTTTGTAACCATTATACAAACAAAATGATTGAACATGTAAAATAGCTATTTGTACAACACAATTCGCTCCAAATCTAAACAAAAATGAAGTTGAACCAAATAACCGATCCACAAACAGGAACTAGCTCATATTGCCTTTGATTTAAGCACCAGTAGAATCGACACTAAAGACTAGATTGCTACAAGCTCGTGGGAAATCTAGAGTGTCAGAGCGACCATAGCGTTTGTTGTTCCCCGTAGACGTAACTTATTGTGCAAAATTCAACAGTAATGTCAAAGATATTAAGATGGTCATAAGTAGAGATATAGCTGGTCTGGAACTGGCATTTGGCAAATAAGGATAGGCATCTGGAGGTGGCAGCACACAGTTATCACCATTGAAATAAACTCTTCTTGGAAAAGCCCAACCCTTGTCGAAAGTGAAAGTGTTCTGGTCTTTCTGAAATAGGAGCTCAGATTGCACATTACCAAGAGGGCCAGCTTGATTGAGCAGATCATTGTAGAACTTAACTCCCCACAACATCGCAGTATCATCTGCAGAACAGTACCATAGTTACCAGCCACTAAGTTGAGAAATAAATTGTATAATGCCGGTTCTTTCCGGTCAACATTATATCA

Coding sequence (CDS)

ATGGAAATCAATACCCACAGTAATATGTTACACAAAATTCTCTGTCGACAGCAAAAAATTGCAGTTTTAGCACTTCTGATCTTTACAGCTTTCTATTCAGCTGGGGCTTACGATCCATTGGATCCAAATGGAAACATAACAATCAAATGGGATATAGTATCTTGGACGGCAGATGGATATGTTGCTGCAGTGACAATGAATAATTTTCAGATGTACCGCCATATTAATGCACCAGGATGGACTCTAGGCTGGTCGTGGGCCAAGAAAGAAGTAATATGGTCGATGGTGGGAGCTCAGACAACAGAGCAAGGAGATTGTTCCAAGTTCAAAGGAAATGTGCCTCACTGCTGCAAGAAAACCCCAGTAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAATCAGCAATTCTCCAATTGCTGCAAGGGTGGAGTATTGGCATCTTGGGGACAGGATCCAGTAGACGATACCGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTACAATCTGAAGTACTAATGAAGAAGGATAAGGATACCTTTACCTTCAAGCAGGGTTGGGCATTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCACCAGAATCATACCCGTTTCTACCCAACTCTGCGCCTGGAGGGTCGAGTGCAGTAGCCAAATTCACCGCCACTTTGCTTTTGATACTCTGGTTTTTGTTGTAA

Protein sequence

MEINTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVDDTGMFYGMKFYNDLLMEAGPFGNVQSEVLMKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPFLPNSAPGGSSAVAKFTATLLLILWFLL

Homology

[Close]

BLAST of Cp4.1LG18g07210 vs. ExPASy Swiss-Prot
Match: Q9LFW3 (COBRA-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=COBL4 PE=2 SV=2)

HSP 1 Score: 320.9 bits (821), Expect = 1.3e-86
Identity = 177/419 (42.24%), Postives = 196/419 (46.78%), Query Frame = 0


Query: 28  FTAFYSAGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAPGWTLGWSWA 87
           F   ++A AYDPLDP+GNITIKWDI+SWTADGYVA VTMNNFQ+YRHI  PGWTLGW+WA
Sbjct: 12  FMIIFTATAYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPGWTLGWTWA 71

Query: 88  KKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLAS 147
           KKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTP VVDLLPGVPYNQQFSNCCKGGV+ +
Sbjct: 72  KKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVIGA 131

Query: 148 WGQDP------------------------------------------------------- 207
           WGQDP                                                       
Sbjct: 132 WGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTTDKR 191

Query: 208 ------------------------------------------------------------ 245
                                                                       
Sbjct: 192 RKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCENKKSCVKADSK 251

[Close]

BLAST of Cp4.1LG18g07210 vs. ExPASy Swiss-Prot
Match: A2XHZ9 (COBRA-like protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=BC1 PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 7.9e-76
Identity = 165/460 (35.87%), Postives = 197/460 (42.83%), Query Frame = 0


Query: 19  KIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAP 78
           + ++LALL+      A AYDPLDP GNITIKWD++SWT DGYVA VTM+N+QMYR I AP
Sbjct: 5   RCSLLALLLAVTCSVAVAYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAP 64

Query: 79  GWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSN 138
           GWT+GWSWAKKEVIWS+VGAQ TEQGDCSKFKG +PH CK+TP +VDLLPGVPYNQQ +N
Sbjct: 65  GWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIAN 124

Query: 139 CCKGGVLASWGQDP---------------------------------------------- 198
           CCK GV++++GQDP                                              
Sbjct: 125 CCKAGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLPTNFTLAGPGPGYTCGPATIVPS 184

Query: 199 ------------------------------------------------------------ 244
                                                                       
Sbjct: 185 TVYLTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHD 244

[Close]

BLAST of Cp4.1LG18g07210 vs. ExPASy Swiss-Prot
Match: Q10JL1 (COBRA-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1 PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 7.9e-76
Identity = 165/460 (35.87%), Postives = 197/460 (42.83%), Query Frame = 0


Query: 19  KIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAP 78
           + ++LALL+      A AYDPLDP GNITIKWD++SWT DGYVA VTM+N+QMYR I AP
Sbjct: 5   RCSLLALLLAVTCSVAVAYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAP 64

Query: 79  GWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSN 138
           GWT+GWSWAKKEVIWS+VGAQ TEQGDCSKFKG +PH CK+TP +VDLLPGVPYNQQ +N
Sbjct: 65  GWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIAN 124

Query: 139 CCKGGVLASWGQDP---------------------------------------------- 198
           CCK GV++++GQDP                                              
Sbjct: 125 CCKAGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLPTNFTLAGPGPGYTCGPATIVPS 184

Query: 199 ------------------------------------------------------------ 244
                                                                       
Sbjct: 185 TVYLTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHD 244

[Close]

BLAST of Cp4.1LG18g07210 vs. ExPASy Swiss-Prot
Match: Q6Z4G7 (COBRA-like protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L7 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.7e-73
Identity = 157/444 (35.36%), Postives = 193/444 (43.47%), Query Frame = 0


Query: 23  LALLIFTAFYS-AGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAPGWT 82
           L LLI  A  S A AYDPLDPNGNITIKWD++SWT DGYVA VT+NN+Q YR I APGWT
Sbjct: 7   LLLLILAATLSVAVAYDPLDPNGNITIKWDVMSWTPDGYVAMVTINNYQTYRQIMAPGWT 66

Query: 83  LGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCK 142
           +GW+WA++EVIWSMVGAQ T+QGDCS+FK N+PHCC++TP VVDLLPGVPYNQQ +NCC+
Sbjct: 67  VGWTWARQEVIWSMVGAQATDQGDCSRFKANLPHCCRRTPAVVDLLPGVPYNQQIANCCR 126

Query: 143 GGVLASWGQDP------------------------------------------------- 202
           GGVL ++GQ P                                                 
Sbjct: 127 GGVLPAYGQAPSAAAAAFQVSVGQAGTTNRTVRLPRNFTLLGPGPGYTCGRARVVPSTVF 186

Query: 203 ------------------------------------------------------------ 248
                                                                       
Sbjct: 187 LTADRRRKTQALMTWNVTCTYSQHLASKYPSCCVSFSSFYNDTIVPCAKCACGCDAHKPC 246

[Close]

BLAST of Cp4.1LG18g07210 vs. ExPASy Swiss-Prot
Match: Q94KT8 (Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.8e-73
Identity = 156/430 (36.28%), Postives = 183/430 (42.56%), Query Frame = 0


Query: 22  VLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAPGWT 81
           ++ L+  ++F S  AYD LDP GNIT+KWD++SWT DGYVA VTM NFQ YRHI +PGWT
Sbjct: 22  IVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWT 81

Query: 82  LGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCK 141
           LGW WAKKEVIWSMVGAQTTEQGDCSK+KGN+PHCCKK P VVDLLPG PYNQQ +NCCK
Sbjct: 82  LGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCK 141

Query: 142 GGVLASWGQDP------------------------------------------------- 201
           GGV+ SW QDP                                                 
Sbjct: 142 GGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVRPTKF 201

Query: 202 ------------------------------------------------------------ 244
                                                                       
Sbjct: 202 VTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNRTE 261

[Close]

BLAST of Cp4.1LG18g07210 vs. NCBI nr
Match: XP_023515595.1 (COBRA-like protein 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 445 bits (1145), Expect = 8.15e-154
Identity = 246/448 (54.91%), Postives = 247/448 (55.13%), Query Frame = 0


Query: 1   MEINTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGY 60
           MEINTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGY
Sbjct: 1   MEINTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGY 60

Query: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120
           VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT
Sbjct: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120

Query: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV--------------------------- 180
           PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV                           
Sbjct: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTVKLPKNFT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 LLGPGPGYTCGPAKVVPSTVFLTPDRRRKTHAVTWNVTCTYSQFLASKNPTCCVSLSTFY 240

Query: 241 ------------------------------------------------------------ 247
                                                                       
Sbjct: 241 NETITSCPTCACGCQHKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCPIRVHWHVK 300

[Close]

BLAST of Cp4.1LG18g07210 vs. NCBI nr
Match: XP_022921964.1 (COBRA-like protein 4 [Cucurbita moschata] >KAG6589595.1 COBRA-like protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 440 bits (1131), Expect = 1.13e-151
Identity = 242/449 (53.90%), Postives = 246/449 (54.79%), Query Frame = 0


Query: 1   MEINTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGY 60
           ME+NTHSNMLHKILC+QQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSW ADGY
Sbjct: 1   MEVNTHSNMLHKILCQQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWAADGY 60

Query: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120
           VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT
Sbjct: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120

Query: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV--------------------------- 180
           PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV                           
Sbjct: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTVKLPKNFT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 LLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTF 240

Query: 241 ------------------------------------------------------------ 247
                                                                       
Sbjct: 241 YNETITSCPTCACGCQHKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCPIRVHWHV 300

[Close]

BLAST of Cp4.1LG18g07210 vs. NCBI nr
Match: XP_022987115.1 (COBRA-like protein 4 [Cucurbita maxima])

HSP 1 Score: 440 bits (1131), Expect = 1.13e-151
Identity = 242/449 (53.90%), Postives = 245/449 (54.57%), Query Frame = 0


Query: 1   MEINTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGY 60
           ME+NTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSW ADGY
Sbjct: 1   MEVNTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWAADGY 60

Query: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120
           VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT
Sbjct: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120

Query: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV--------------------------- 180
           PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV                           
Sbjct: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTVKLPKNFT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 LLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTF 240

Query: 241 ------------------------------------------------------------ 247
                                                                       
Sbjct: 241 YNETITSCPTCACGCQHKHNCIKSGSKLLHKEGLNTPKKDNTPLLQCTYHMCPIRVHWHV 300

[Close]

BLAST of Cp4.1LG18g07210 vs. NCBI nr
Match: KAG7023283.1 (COBRA-like protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 438 bits (1127), Expect = 4.57e-151
Identity = 241/449 (53.67%), Postives = 246/449 (54.79%), Query Frame = 0


Query: 1   MEINTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGY 60
           ME+NTHSNMLHKILC+Q+KIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSW ADGY
Sbjct: 1   MEVNTHSNMLHKILCQQKKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWAADGY 60

Query: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120
           VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT
Sbjct: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120

Query: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV--------------------------- 180
           PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV                           
Sbjct: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTVKLPKNFT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 LLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTF 240

Query: 241 ------------------------------------------------------------ 247
                                                                       
Sbjct: 241 YNETITSCPTCACGCQHKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCPIRVHWHV 300

[Close]

BLAST of Cp4.1LG18g07210 vs. NCBI nr
Match: XP_008453301.1 (PREDICTED: COBRA-like protein 4 [Cucumis melo])

HSP 1 Score: 400 bits (1029), Expect = 4.33e-136
Identity = 223/455 (49.01%), Postives = 236/455 (51.87%), Query Frame = 0


Query: 1   MEINTHSNMLHKIL----C---RQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIV 60
           ME+NT+++ LHKIL    C   RQQKIA+LALLIFTAFYS GAYDPLDPNGNITIKWD+V
Sbjct: 1   MEVNTYNHSLHKILFQWECYSPRQQKIALLALLIFTAFYSTGAYDPLDPNGNITIKWDVV 60

Query: 61  SWTADGYVAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV 120
           SWT DGYVA VTMNNFQMYRHIN+PGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV
Sbjct: 61  SWTPDGYVAVVTMNNFQMYRHINSPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV 120

Query: 121 PHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDP--------------------- 180
           PHCCKKTP VVDLLPGVPYNQQFSNCCKGGVLASWGQDP                     
Sbjct: 121 PHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVLASWGQDPTSSVSAFQVSVGLAGTSNKTV 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 KLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTC 240

Query: 241 ------------------------------------------------------------ 246
                                                                       
Sbjct: 241 CVSLSTFYNDTITSCPTCACGCQNKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCP 300

[Close]

BLAST of Cp4.1LG18g07210 vs. ExPASy TrEMBL
Match: A0A6J1JFX1 (COBRA-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484765 PE=3 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 5.46e-152
Identity = 242/449 (53.90%), Postives = 245/449 (54.57%), Query Frame = 0


Query: 1   MEINTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGY 60
           ME+NTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSW ADGY
Sbjct: 1   MEVNTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWAADGY 60

Query: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120
           VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT
Sbjct: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120

Query: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV--------------------------- 180
           PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV                           
Sbjct: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTVKLPKNFT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 LLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTF 240

Query: 241 ------------------------------------------------------------ 247
                                                                       
Sbjct: 241 YNETITSCPTCACGCQHKHNCIKSGSKLLHKEGLNTPKKDNTPLLQCTYHMCPIRVHWHV 300

[Close]

BLAST of Cp4.1LG18g07210 vs. ExPASy TrEMBL
Match: A0A6J1E216 (COBRA-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430063 PE=3 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 5.46e-152
Identity = 242/449 (53.90%), Postives = 246/449 (54.79%), Query Frame = 0


Query: 1   MEINTHSNMLHKILCRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGY 60
           ME+NTHSNMLHKILC+QQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSW ADGY
Sbjct: 1   MEVNTHSNMLHKILCQQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWAADGY 60

Query: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120
           VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT
Sbjct: 61  VAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKT 120

Query: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV--------------------------- 180
           PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV                           
Sbjct: 121 PVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTVKLPKNFT 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 LLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTF 240

Query: 241 ------------------------------------------------------------ 247
                                                                       
Sbjct: 241 YNETITSCPTCACGCQHKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCPIRVHWHV 300

[Close]

BLAST of Cp4.1LG18g07210 vs. ExPASy TrEMBL
Match: A0A1S3BVY3 (COBRA-like protein OS=Cucumis melo OX=3656 GN=LOC103494059 PE=3 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 2.10e-136
Identity = 223/455 (49.01%), Postives = 236/455 (51.87%), Query Frame = 0


Query: 1   MEINTHSNMLHKIL----C---RQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIV 60
           ME+NT+++ LHKIL    C   RQQKIA+LALLIFTAFYS GAYDPLDPNGNITIKWD+V
Sbjct: 1   MEVNTYNHSLHKILFQWECYSPRQQKIALLALLIFTAFYSTGAYDPLDPNGNITIKWDVV 60

Query: 61  SWTADGYVAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV 120
           SWT DGYVA VTMNNFQMYRHIN+PGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV
Sbjct: 61  SWTPDGYVAVVTMNNFQMYRHINSPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV 120

Query: 121 PHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDP--------------------- 180
           PHCCKKTP VVDLLPGVPYNQQFSNCCKGGVLASWGQDP                     
Sbjct: 121 PHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVLASWGQDPTSSVSAFQVSVGLAGTSNKTV 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 KLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTC 240

Query: 241 ------------------------------------------------------------ 246
                                                                       
Sbjct: 241 CVSLSTFYNDTITSCPTCACGCQNKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCP 300

[Close]

BLAST of Cp4.1LG18g07210 vs. ExPASy TrEMBL
Match: A0A5D3BES0 (COBRA-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00040 PE=3 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 1.54e-135
Identity = 223/455 (49.01%), Postives = 236/455 (51.87%), Query Frame = 0


Query: 1   MEINTHSNMLHKIL----C---RQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIV 60
           ME+NT+++ LHKIL    C   RQQKIA+LALLIFTAFYS GAYDPLDPNGNITIKWD+V
Sbjct: 63  MEVNTYNHSLHKILFQWECYSPRQQKIALLALLIFTAFYSTGAYDPLDPNGNITIKWDVV 122

Query: 61  SWTADGYVAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV 120
           SWT DGYVA VTMNNFQMYRHIN+PGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV
Sbjct: 123 SWTPDGYVAVVTMNNFQMYRHINSPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV 182

Query: 121 PHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDP--------------------- 180
           PHCCKKTP VVDLLPGVPYNQQFSNCCKGGVLASWGQDP                     
Sbjct: 183 PHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVLASWGQDPTSSVSAFQVSVGLAGTSNKTV 242

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 243 KLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTC 302

Query: 241 ------------------------------------------------------------ 246
                                                                       
Sbjct: 303 CVSLSTFYNDTITSCPTCACGCQNKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCP 362

[Close]

BLAST of Cp4.1LG18g07210 vs. ExPASy TrEMBL
Match: A0A6J1EZL7 (COBRA-like protein OS=Cucurbita moschata OX=3662 GN=LOC111440817 PE=3 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 9.76e-135
Identity = 219/455 (48.13%), Postives = 234/455 (51.43%), Query Frame = 0


Query: 1   MEINTHSNMLHKIL-------CRQQKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIV 60
           ME+NT+S++ HKIL        RQ+++ +LALLIF  FYS GAYDPLDPNGNITIKWD+V
Sbjct: 1   MEVNTYSDLSHKILFQMECYSARQKRVVLLALLIFATFYSTGAYDPLDPNGNITIKWDVV 60

Query: 61  SWTADGYVAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV 120
           SWT DGYVA VTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV
Sbjct: 61  SWTPDGYVAVVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNV 120

Query: 121 PHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPV-------------------- 180
           PHCCKKTP+VVDLLPGVPYNQQFSNCCKGGVLASWGQDPV                    
Sbjct: 121 PHCCKKTPIVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTV 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 KLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTC 240

Query: 241 ------------------------------------------------------------ 246
                                                                       
Sbjct: 241 CVSLSTFYNDTITSCPTCACGCQNKHNCIKSNSKLLHKDGINTPKKDNTPLLQCTHHMCP 300

[Close]

BLAST of Cp4.1LG18g07210 vs. TAIR 10
Match: AT5G15630.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 320.9 bits (821), Expect = 9.2e-88
Identity = 177/419 (42.24%), Postives = 196/419 (46.78%), Query Frame = 0


Query: 28  FTAFYSAGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAPGWTLGWSWA 87
           F   ++A AYDPLDP+GNITIKWDI+SWTADGYVA VTMNNFQ+YRHI  PGWTLGW+WA
Sbjct: 12  FMIIFTATAYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPGWTLGWTWA 71

Query: 88  KKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLAS 147
           KKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTP VVDLLPGVPYNQQFSNCCKGGV+ +
Sbjct: 72  KKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVIGA 131

Query: 148 WGQDP------------------------------------------------------- 207
           WGQDP                                                       
Sbjct: 132 WGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTTDKR 191

Query: 208 ------------------------------------------------------------ 245
                                                                       
Sbjct: 192 RKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCENKKSCVKADSK 251

[Close]

BLAST of Cp4.1LG18g07210 vs. TAIR 10
Match: AT5G60920.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 275.8 bits (704), Expect = 3.4e-74
Identity = 156/430 (36.28%), Postives = 183/430 (42.56%), Query Frame = 0


Query: 22  VLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAPGWT 81
           ++ L+  ++F S  AYD LDP GNIT+KWD++SWT DGYVA VTM NFQ YRHI +PGWT
Sbjct: 22  IVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWT 81

Query: 82  LGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCK 141
           LGW WAKKEVIWSMVGAQTTEQGDCSK+KGN+PHCCKK P VVDLLPG PYNQQ +NCCK
Sbjct: 82  LGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCK 141

Query: 142 GGVLASWGQDP------------------------------------------------- 201
           GGV+ SW QDP                                                 
Sbjct: 142 GGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVRPTKF 201

Query: 202 ------------------------------------------------------------ 244
                                                                       
Sbjct: 202 VTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNRTE 261

[Close]

BLAST of Cp4.1LG18g07210 vs. TAIR 10
Match: AT3G02210.1 (COBRA-like protein 1 precursor )

HSP 1 Score: 274.2 bits (700), Expect = 9.9e-74
Identity = 153/433 (35.33%), Postives = 187/433 (43.19%), Query Frame = 0


Query: 20  IAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAPG 79
           I+++ L+ F+    + AYDPLDP+GNIT+KWDI++WT DGYVA VT+ NFQ YRHI APG
Sbjct: 17  ISIIFLVSFSGLTPSEAYDPLDPSGNITVKWDIITWTGDGYVATVTVYNFQQYRHIQAPG 76

Query: 80  WTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNC 139
           WTLGWSWAK+EVIW M G QTTEQGDCSKFKG +PHCCKKTP VVDLLPG PYNQQ +NC
Sbjct: 77  WTLGWSWAKREVIWGMNGGQTTEQGDCSKFKGTIPHCCKKTPSVVDLLPGSPYNQQIANC 136

Query: 140 CKGGVLASWGQDP----------------------------------------------- 199
           C+GGVL SW QDP                                               
Sbjct: 137 CRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLKAPGPGYTCSPAKIVKPT 196

Query: 200 ------------------------------------------------------------ 247
                                                                       
Sbjct: 197 RFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCGCRNTS 256

[Close]

BLAST of Cp4.1LG18g07210 vs. TAIR 10
Match: AT3G29810.1 (COBRA-like protein 2 precursor )

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-69
Identity = 147/419 (35.08%), Postives = 176/419 (42.00%), Query Frame = 0


Query: 31  FYSAGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAPGWTLGWSWAKKE 90
           F +  AYD LDP GNITIKWDI+SWT DGYVA VT+ NFQ YRHI APGW LGWSW KKE
Sbjct: 23  FTTTEAYDALDPYGNITIKWDIMSWTGDGYVAVVTIFNFQQYRHIEAPGWQLGWSWMKKE 82

Query: 91  VIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQ 150
           VIWSMVG Q TEQGDCSKFKGN+PHCCKKTP +VDLLPG PYNQQ SNCC+GGV+++W Q
Sbjct: 83  VIWSMVGGQATEQGDCSKFKGNIPHCCKKTPAIVDLLPGTPYNQQISNCCRGGVISAWAQ 142

Query: 151 DP---------------------------------------------------------- 210
           DP                                                          
Sbjct: 143 DPATAISSFQISVGQSGTTNTTVRAPRNITLKAPGPGYTCGPAKLVKPSRFISADKRRKT 202

Query: 211 ------------------------------------------------------------ 248
                                                                       
Sbjct: 203 QSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSCGCQNSSQAGTCVDPKIA 262

[Close]

BLAST of Cp4.1LG18g07210 vs. TAIR 10
Match: AT1G09790.1 (COBRA-like protein 6 precursor )

HSP 1 Score: 184.9 bits (468), Expect = 7.9e-47
Identity = 114/415 (27.47%), Postives = 151/415 (36.39%), Query Frame = 0


Query: 34  AGAYDPLDPNGNITIKWDIVSWTADGYVAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIW 93
           A  YDPLDP G I IKWD++  +   +   VT+ N Q YRH+  PGW L W W  +EVIW
Sbjct: 33  ADGYDPLDPFGKIIIKWDLLLSSPGQHHVQVTLENMQEYRHVEKPGWKLSWHWLNQEVIW 92

Query: 94  SMVGAQTTEQGDCSKF--KGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQD 153
            M GA+TTEQG+CS F   GN+PHCC + P +VDLLPG   N Q +NCC+GGVL S  QD
Sbjct: 93  DMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQD 152

Query: 154 ------------------------------------------------------------ 213
                                                                       
Sbjct: 153 HANHVSAFHMTVGSSPDGPEEFNMPSNFDIGVPGYSCDNATSVSPTKFSTDKGRRKTQAL 212

Query: 214 ------------------------------------------------------------ 247
                                                                       
Sbjct: 213 ATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCSSSHCVKDGELPPYLEQK 272

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g07210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFW3	1.3e-86	42.24	COBRA-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=COBL4 PE=2 SV=2	[more]
A2XHZ9	7.9e-76	35.87	COBRA-like protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=BC1 PE=2 SV=1	[more]
Q10JL1	7.9e-76	35.87	COBRA-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1 PE=2 SV=1	[more]
Q6Z4G7	3.7e-73	35.36	COBRA-like protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L7 PE=3 SV=1	[more]
Q94KT8	4.8e-73	36.28	Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1	[more]

BLAST of Cp4.1LG18g07210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515595.1	8.15e-154	54.91	COBRA-like protein 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022921964.1	1.13e-151	53.90	COBRA-like protein 4 [Cucurbita moschata] >KAG6589595.1 COBRA-like protein 4, pa...	[more]
XP_022987115.1	1.13e-151	53.90	COBRA-like protein 4 [Cucurbita maxima]	[more]
KAG7023283.1	4.57e-151	53.67	COBRA-like protein 4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008453301.1	4.33e-136	49.01	PREDICTED: COBRA-like protein 4 [Cucumis melo]	[more]

BLAST of Cp4.1LG18g07210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JFX1	5.46e-152	53.90	COBRA-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484765 PE=3 SV=1	[more]
A0A6J1E216	5.46e-152	53.90	COBRA-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430063 PE=3 SV=1	[more]
A0A1S3BVY3	2.10e-136	49.01	COBRA-like protein OS=Cucumis melo OX=3656 GN=LOC103494059 PE=3 SV=1	[more]
A0A5D3BES0	1.54e-135	49.01	COBRA-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346...	[more]
A0A6J1EZL7	9.76e-135	48.13	COBRA-like protein OS=Cucurbita moschata OX=3662 GN=LOC111440817 PE=3 SV=1	[more]

BLAST of Cp4.1LG18g07210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15630.1	9.2e-88	42.24	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT5G60920.1	3.4e-74	36.28	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT3G02210.1	9.9e-74	35.33	COBRA-like protein 1 precursor	[more]
AT3G29810.1	1.1e-69	35.08	COBRA-like protein 2 precursor	[more]
AT1G09790.1	7.9e-47	27.47	COBRA-like protein 6 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006918	COBRA, plant	PFAM	PF04833	COBRA	coord: 60..160 e-value: 4.8E-45 score: 153.4
IPR006918	COBRA, plant	PANTHER	PTHR31673	PROTEIN COBRA	coord: 153..244
IPR006918	COBRA, plant	PANTHER	PTHR31673	PROTEIN COBRA	coord: 20..152
None	No IPR available	PANTHER	PTHR31673:SF28	COBRA-LIKE PROTEIN	coord: 20..152 coord: 153..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g07210.1	Cp4.1LG18g07210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010215	cellulose microfibril organization
biological_process	GO:0006412	translation
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0032991	protein-containing complex