Cp4.1LG18g06580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG18g06580
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description60S ribosomal protein L7-2
LocationCp4.1LG18: 6606385 .. 6608547 (-)
RNA-Seq ExpressionCp4.1LG18g06580
SyntenyCp4.1LG18g06580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACCCTTTTCGCGCAAAGAGCTCCGCAGCCGCAACTTCGACCATCTGAGCAAGAAGTATGTTTCTCTATATTTCTTCATTTTCACCTCTTATTATTGTTTCTATTTCATGATTTCTAAGAATCTGTAGTAATCGTGAGTAGTGTTGACGAGAATCGCAATGTTTTTCTTATTTTGAAGAATGTCAATGAAGTTTTTATCTTCTATTGTTCTGCCTTTTGGTTTGTGATTGATTTAGGTTTTAGAATTTTGATCTTACTTTGGTTTCGTTTAGAGAAATGAGTGCGGAAGGAGTCAAGGCTAGCCCGGTGGTTCCGGAGTCCGTGTTGAAGAAGCGGAAGAGGAACGAAGAATGGGCTCTGGCTGAGAAAAAAGATCTAGTGGCTGCGAAGAAGAAGAATGCTGAGAACAGGAAACTGATCTTTAACAGGGCTAAACTCTATGCCAAGGAGTATGATGAGCAGCAAAAGGAGTTGGTTCGTTTGAAGCGCGAGGCTAGACTCAAGGGCGGATTTTATGTCGACCCTGAGGCCAAGCTTCTGTTTATTATCAGGATCCGAGGGTGAGTCTTTTTTTAGTGAGAAATCATTATTTTGGACTGGTTGAATCGTTTGTATCAGCGTTTTTATTATGCTTTTGGATTTTCAGTATCAATGCTATTGACCCAAAGACGAAGAAGATTCTGCAGCTTCTGCGTTTGAGACAGGTAACACATTACTTCATTGACTTCATCTTACAGACGATGAATTTAGACAATTTCTTCAAGCGAATTTTTGTTCGTTTAGTTTCAATTTTATCTCACAAATAAATATTATTTGATGCATAATAGTTTTGCCATTGTTAGTGTCTATCTGTTGCTGCACTCTTCTTATACAACATATGAGTTAATTCACTGATTTCTTATACAACATATGGAAGTTAATTCACTGATTTCTTATACAACATATGGAAGTTAATTCACTGTTCTTATACAACATATGGAAGTTAATTCACTGTTCTTATACAACATATGGAAGTTAATTCACTGATTTCATGTAGAGTGGCTCTCCCCCCATTTTTTGTAATTTCATTTCTCTTAGATACATATACGTCTGTCATTGAAGCATTTCTTTTTGGAAGTTTACTTCAAAGATTTTGTTTCTGTATATTTAATTAATGGTGAAGAAGGCTGTGACACTAAATTACTTTTTGGGTTTTGACTATTATATTTTTCTGTGCTGTAGATTTATAGACAGCTTCGCATGTATCATGTTAATATAAACATTTTGATGTAGAAACACTCCTGAAATTATAAACCCCTTGGTTGTTTTTGTTGGAAATGTATTCATTGCAAATATAGAGTTTTACACCTCACACGATTACCAACCCTGCAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAATATGTTACACAGAGTGGAGCCATACGTTACATATGGGTATGTTTTTCTTGTATATCTCCTTTCCTTTTCTTTTGGGTTTTCTAGAGATCAAACTTAACTCATCTTGTTTTACTGAACTGATACTTTCAGGTATCCCAACTTGAAGAGCGTTAAAGAACTCATTTACAAGAGAGGCTTCGGAAAACTCAACAAACGAAGAACTGCTTTGACTGACAACTCCATCATTGAGCAGGTGTGTAGCTTGAATGAAATCAGTATTGTATTTTGTAACTACTACAACTCTGATGGGTTTGTTTGTTCCAGGCTCTTGGGAAGTTTGGTATTATTTGCACAGAAGACCTCATCCATGAGATCTTGACAGTGGGACCCCATTTTAAGGAAGCCAACAATTTCCTGTGGCCCTTCAAGCTGAAAGCTCCTCTGGGTGGTCTTAAGAAGAAGAGGAATCACTATGTGGAAGGAGGTGACGCTGGGAACCGCGAGAACTACATCAACGAGCTAATCAGAAGGATGAATTAGGTTTTTACATTTTGTGTTGTTTCTCCAAAGTTCATGGATTTATAGGTTTTTTATCATTTGAAGTATCGGTTTTGGAATCAGAATGTTTTGCTACTATTGTTTCATCATTAGTGTACTTTTATCCTCCGAATTATTATCGTTGAGAACGGTTTAAATTTTGATTTTATTCCAGAAATTTTGGTATTTCCTTTCTATTTTATTTATTGCAGGACTTTCATGTTCTTGATT

mRNA sequence

CAACCCTTTTCGCGCAAAGAGCTCCGCAGCCGCAACTTCGACCATCTGAGCAAGAAAGAAATGAGTGCGGAAGGAGTCAAGGCTAGCCCGGTGGTTCCGGAGTCCGTGTTGAAGAAGCGGAAGAGGAACGAAGAATGGGCTCTGGCTGAGAAAAAAGATCTAGTGGCTGCGAAGAAGAAGAATGCTGAGAACAGGAAACTGATCTTTAACAGGGCTAAACTCTATGCCAAGGAGTATGATGAGCAGCAAAAGGAGTTGGTTCGTTTGAAGCGCGAGGCTAGACTCAAGGGCGGATTTTATGTCGACCCTGAGGCCAAGCTTCTGTTTATTATCAGGATCCGAGGTATCAATGCTATTGACCCAAAGACGAAGAAGATTCTGCAGCTTCTGCGTTTGAGACAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAATATGTTACACAGAGTGGAGCCATACGTTACATATGGGTATCCCAACTTGAAGAGCGTTAAAGAACTCATTTACAAGAGAGGCTTCGGAAAACTCAACAAACGAAGAACTGCTTTGACTGACAACTCCATCATTGAGCAGGCTCTTGGGAAGTTTGGTATTATTTGCACAGAAGACCTCATCCATGAGATCTTGACAGTGGGACCCCATTTTAAGGAAGCCAACAATTTCCTGTGGCCCTTCAAGCTGAAAGCTCCTCTGGGTGGTCTTAAGAAGAAGAGGAATCACTATGTGGAAGGAGGTGACGCTGGGAACCGCGAGAACTACATCAACGAGCTAATCAGAAGGATGAATTAGGTTTTTACATTTTGTGTTGTTTCTCCAAAGTTCATGGATTTATAGGTTTTTTATCATTTGAAGTATCGGTTTTGGAATCAGAATGTTTTGCTACTATTGTTTCATCATTAGTGTACTTTTATCCTCCGAATTATTATCGTTGAGAACGGTTTAAATTTTGATTTTATTCCAGAAATTTTGGTATTTCCTTTCTATTTTATTTATTGCAGGACTTTCATGTTCTTGATT

Coding sequence (CDS)

CAACCCTTTTCGCGCAAAGAGCTCCGCAGCCGCAACTTCGACCATCTGAGCAAGAAAGAAATGAGTGCGGAAGGAGTCAAGGCTAGCCCGGTGGTTCCGGAGTCCGTGTTGAAGAAGCGGAAGAGGAACGAAGAATGGGCTCTGGCTGAGAAAAAAGATCTAGTGGCTGCGAAGAAGAAGAATGCTGAGAACAGGAAACTGATCTTTAACAGGGCTAAACTCTATGCCAAGGAGTATGATGAGCAGCAAAAGGAGTTGGTTCGTTTGAAGCGCGAGGCTAGACTCAAGGGCGGATTTTATGTCGACCCTGAGGCCAAGCTTCTGTTTATTATCAGGATCCGAGGTATCAATGCTATTGACCCAAAGACGAAGAAGATTCTGCAGCTTCTGCGTTTGAGACAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAATATGTTACACAGAGTGGAGCCATACGTTACATATGGGTATCCCAACTTGAAGAGCGTTAAAGAACTCATTTACAAGAGAGGCTTCGGAAAACTCAACAAACGAAGAACTGCTTTGACTGACAACTCCATCATTGAGCAGGCTCTTGGGAAGTTTGGTATTATTTGCACAGAAGACCTCATCCATGAGATCTTGACAGTGGGACCCCATTTTAAGGAAGCCAACAATTTCCTGTGGCCCTTCAAGCTGAAAGCTCCTCTGGGTGGTCTTAAGAAGAAGAGGAATCACTATGTGGAAGGAGGTGACGCTGGGAACCGCGAGAACTACATCAACGAGCTAATCAGAAGGATGAATTAG

Protein sequence

QPFSRKELRSRNFDHLSKKEMSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Homology
[Close]
BLAST of Cp4.1LG18g06580 vs. ExPASy Swiss-Prot
Match: Q9LHP1 (60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 2.9e-116
Identity = 206/240 (85.83%), Postives = 228/240 (95.00%), Query Frame = 0 

Query: 27  KASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYDEQQKEL 86
           ++  VVPESVLKKRKR EEWALA+K++L AAKK+NAE RKLIFNRAK Y+KEY E+++EL
Sbjct: 5   ESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKEREL 64

Query: 87  VRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 146
           ++LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA
Sbjct: 65  IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 124

Query: 147 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICTE 206
           T+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RTALTDNSI++Q LGK GIIC E
Sbjct: 125 TINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVE 184

Query: 207 DLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 266
           DLIHEI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 185 DLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]
BLAST of Cp4.1LG18g06580 vs. ExPASy Swiss-Prot
Match: P60040 (60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 4.9e-116
Identity = 209/241 (86.72%), Postives = 228/241 (94.61%), Query Frame = 0 

Query: 26  VKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYDEQQKE 85
           V++  VVPESVLKKRKR EEWAL +K+++ AAKKKNAENRKLIF RA+ Y+KEY E++KE
Sbjct: 2   VESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKE 61

Query: 86  LVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 145
           L+ LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK
Sbjct: 62  LISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 121

Query: 146 ATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICT 205
           AT+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN +R ALTDNSI+EQALGK GIICT
Sbjct: 122 ATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICT 181

Query: 206 EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM 265
           EDLIHEILTVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INELIRRM
Sbjct: 182 EDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRM 241

Query: 266 N 267
           N
Sbjct: 242 N 242

[Close]
BLAST of Cp4.1LG18g06580 vs. ExPASy Swiss-Prot
Match: P60039 (60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 6.7e-113
Identity = 204/236 (86.44%), Postives = 220/236 (93.22%), Query Frame = 0 

Query: 31  VVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYDEQQKELVRLK 90
           VVPESVLKK KR EEWALA+K + VAAKKK+ E RKLIF RA+ YAKEY E+  EL+RLK
Sbjct: 7   VVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLK 66

Query: 91  REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 150
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 67  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNM 126

Query: 151 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICTEDLIH 210
           L RVEPYVTYGYPNLKSVKELIYKRG+GKLN +R ALTDNSI++QALGK GIIC EDLIH
Sbjct: 127 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIH 186

Query: 211 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 267
           EI+TVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 187 EIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

[Close]
BLAST of Cp4.1LG18g06580 vs. ExPASy Swiss-Prot
Match: Q58DT1 (60S ribosomal protein L7 OS=Bos taurus OX=9913 GN=RPL7 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.1e-80
Identity = 151/247 (61.13%), Postives = 184/247 (74.49%), Query Frame = 0 

Query: 20  EMSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEY 79
           E + E  K  P VPE++ KKRK   E  +   +   A K      RKLI+ +AK Y KEY
Sbjct: 2   EGAEEKKKKVPAVPETLKKKRKNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEY 61

Query: 80  DEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGV 139
            +  +  +R+ R AR  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG 
Sbjct: 62  RQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGT 121

Query: 140 FLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGK 199
           F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRG+GK+NK+R ALTDN++I ++LGK
Sbjct: 122 FVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGK 181

Query: 200 FGIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYIN 259
           +GIIC EDLIHEI TVG  FKEANNFLWPFKL +P GG+KKK  H+VEGGDAGNRE+ IN
Sbjct: 182 YGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQIN 241

Query: 260 ELIRRMN 267
            LIRRMN
Sbjct: 242 RLIRRMN 248

[Close]
BLAST of Cp4.1LG18g06580 vs. ExPASy Swiss-Prot
Match: Q4R506 (60S ribosomal protein L7 OS=Macaca fascicularis OX=9541 GN=RPL7 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-80
Identity = 150/244 (61.48%), Postives = 183/244 (75.00%), Query Frame = 0 

Query: 23  AEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYDEQ 82
           AE  K  P VPE++ KKR+   E  +   +   A K      RKLI+ +AK Y KEY + 
Sbjct: 4   AEEKKKVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQM 63

Query: 83  QKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLK 142
            +  +R+ R AR  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K
Sbjct: 64  YRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVK 123

Query: 143 VNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGI 202
           +NKA++NML  VEPY+ +GYPNLKSV ELIYKRG+GK+NK+R ALTDN++I ++LGK+GI
Sbjct: 124 LNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGI 183

Query: 203 ICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELI 262
           IC EDLIHEI TVG  FKEANNFLWPFKL +P GG+KKK  H+VEGGDAGNRE+ IN LI
Sbjct: 184 ICMEDLIHEICTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLI 243

Query: 263 RRMN 267
           RRMN
Sbjct: 244 RRMN 247

[Close]
BLAST of Cp4.1LG18g06580 vs. NCBI nr
Match: KAG6589682.1 (60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 516 bits (1328), Expect = 9.66e-178
Identity = 263/266 (98.87%), Postives = 265/266 (99.62%), Query Frame = 0 

Query: 1   QPFSRKELRSRNFDHLSKKEMSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKK 60
           QPFSRK+LRSRNFDHLSKKEMSAEGVK +PVVPESVLKKRKRNEEWALAEKKDLVAAKKK
Sbjct: 429 QPFSRKDLRSRNFDHLSKKEMSAEGVKPNPVVPESVLKKRKRNEEWALAEKKDLVAAKKK 488

Query: 61  NAENRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAID 120
           NAENRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAID
Sbjct: 489 NAENRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAID 548

Query: 121 PKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKL 180
           PKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKL
Sbjct: 549 PKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKL 608

Query: 181 NKRRTALTDNSIIEQALGKFGIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKK 240
           NKRRTALTDNSIIEQALGKFGIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKK
Sbjct: 609 NKRRTALTDNSIIEQALGKFGIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKK 668

Query: 241 KRNHYVEGGDAGNRENYINELIRRMN 266
           KRNHYVEGGDAGNRENYINELIRRMN
Sbjct: 669 KRNHYVEGGDAGNRENYINELIRRMN 694

[Close]
BLAST of Cp4.1LG18g06580 vs. NCBI nr
Match: XP_023516710.1 (60S ribosomal protein L7-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482 bits (1241), Expect = 3.32e-171
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0 

Query: 21  MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 80
           MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 81  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 140
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 141 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 200
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 180

Query: 201 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 260
           GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 261 LIRRMN 266
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]
BLAST of Cp4.1LG18g06580 vs. NCBI nr
Match: XP_022987336.1 (60S ribosomal protein L7-2 [Cucurbita maxima] >XP_022987339.1 60S ribosomal protein L7-2 [Cucurbita maxima])

HSP 1 Score: 481 bits (1238), Expect = 9.52e-171
Identity = 245/246 (99.59%), Postives = 246/246 (100.00%), Query Frame = 0 

Query: 21  MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 80
           MSAEGVKA+PVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSAEGVKANPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 81  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 140
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 141 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 200
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 180

Query: 201 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 260
           GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 261 LIRRMN 266
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]
BLAST of Cp4.1LG18g06580 vs. NCBI nr
Match: KAG7023362.1 (60S ribosomal protein L7-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 479 bits (1232), Expect = 7.82e-170
Identity = 243/246 (98.78%), Postives = 245/246 (99.59%), Query Frame = 0 

Query: 21  MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 80
           MSAEGVK +PVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSAEGVKPNPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 81  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 140
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 141 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 200
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSI+EQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIVEQALGKF 180

Query: 201 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 260
           GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 261 LIRRMN 266
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]
BLAST of Cp4.1LG18g06580 vs. NCBI nr
Match: XP_022921914.1 (60S ribosomal protein L7-2 [Cucurbita moschata] >XP_022921915.1 60S ribosomal protein L7-2 [Cucurbita moschata])

HSP 1 Score: 476 bits (1226), Expect = 6.43e-169
Identity = 243/246 (98.78%), Postives = 244/246 (99.19%), Query Frame = 0 

Query: 21  MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 80
           MSAEGVK +PVVPESVLKKRKRNEEWALAEKK LVAAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSAEGVKPNPVVPESVLKKRKRNEEWALAEKKGLVAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 81  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 140
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 141 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 200
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 180

Query: 201 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 260
           GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 261 LIRRMN 266
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]
BLAST of Cp4.1LG18g06580 vs. ExPASy TrEMBL
Match: A0A6J1JDW2 (60S ribosomal protein L7-2 OS=Cucurbita maxima OX=3661 GN=LOC111484921 PE=3 SV=1)

HSP 1 Score: 481 bits (1238), Expect = 4.61e-171
Identity = 245/246 (99.59%), Postives = 246/246 (100.00%), Query Frame = 0 

Query: 21  MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 80
           MSAEGVKA+PVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSAEGVKANPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 81  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 140
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 141 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 200
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 180

Query: 201 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 260
           GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 261 LIRRMN 266
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]
BLAST of Cp4.1LG18g06580 vs. ExPASy TrEMBL
Match: A0A6J1E1W3 (60S ribosomal protein L7-2 OS=Cucurbita moschata OX=3662 GN=LOC111430031 PE=3 SV=1)

HSP 1 Score: 476 bits (1226), Expect = 3.11e-169
Identity = 243/246 (98.78%), Postives = 244/246 (99.19%), Query Frame = 0 

Query: 21  MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 80
           MSAEGVK +PVVPESVLKKRKRNEEWALAEKK LVAAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSAEGVKPNPVVPESVLKKRKRNEEWALAEKKGLVAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 81  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 140
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 141 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 200
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 180

Query: 201 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 260
           GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 261 LIRRMN 266
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]
BLAST of Cp4.1LG18g06580 vs. ExPASy TrEMBL
Match: A0A6J1ETP4 (60S ribosomal protein L7-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437634 PE=3 SV=1)

HSP 1 Score: 469 bits (1207), Expect = 2.45e-166
Identity = 239/246 (97.15%), Postives = 240/246 (97.56%), Query Frame = 0 

Query: 21  MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 80
           MS+EGVK  PVVPESVLKKRKRNEEWALAEKK L AAKKKNAENRKLIFNRAKLYAKEYD
Sbjct: 1   MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNAENRKLIFNRAKLYAKEYD 60

Query: 81  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 140
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 141 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 200
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQALGKF 180

Query: 201 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 260
           GIIC EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 261 LIRRMN 266
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]
BLAST of Cp4.1LG18g06580 vs. ExPASy TrEMBL
Match: A0A6J1IG46 (60S ribosomal protein L7-4-like OS=Cucurbita maxima OX=3661 GN=LOC111473079 PE=3 SV=1)

HSP 1 Score: 466 bits (1199), Expect = 4.06e-165
Identity = 237/246 (96.34%), Postives = 238/246 (96.75%), Query Frame = 0 

Query: 21  MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 80
           MS+EGVK  PVVPESVLKKRKRNEEWALAEKK L AAKKKN ENRKLIFNRAKLYAKEYD
Sbjct: 1   MSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYD 60

Query: 81  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 140
           EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF
Sbjct: 61  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 120

Query: 141 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 200
           LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQ LGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKF 180

Query: 201 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 260
           GIIC EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE
Sbjct: 181 GIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 240

Query: 261 LIRRMN 266
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]
BLAST of Cp4.1LG18g06580 vs. ExPASy TrEMBL
Match: A0A6J1C1C8 (60S ribosomal protein L7-2 OS=Momordica charantia OX=3673 GN=LOC111007372 PE=3 SV=1)

HSP 1 Score: 463 bits (1192), Expect = 4.73e-164
Identity = 231/246 (93.90%), Postives = 242/246 (98.37%), Query Frame = 0 

Query: 21  MSAEGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYD 80
           MS EGVK  PVVPESVLKKRKRNEEWALAEKKDL A+KKK+AENRKLI+NRAKLYAKEYD
Sbjct: 1   MSGEGVKGGPVVPESVLKKRKRNEEWALAEKKDLEASKKKSAENRKLIYNRAKLYAKEYD 60

Query: 81  EQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVF 140
           EQQKEL+RLKREA+LKGGFYVDPEAKLLFI+RIRGINAIDPKT+KILQLLRLRQIFNGVF
Sbjct: 61  EQQKELIRLKREAKLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVF 120

Query: 141 LKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKF 200
           LKVNKATLNMLHRVEPYVTYGYPNLKSV+ELIYKRG+GKLNKRRTALTDNSIIEQALGKF
Sbjct: 121 LKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKRRTALTDNSIIEQALGKF 180

Query: 201 GIICTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINE 260
           GIICTEDLIHEI+TVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNREN+INE
Sbjct: 181 GIICTEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENFINE 240

Query: 261 LIRRMN 266
           LIRRMN
Sbjct: 241 LIRRMN 246

[Close]
BLAST of Cp4.1LG18g06580 vs. TAIR 10
Match: AT3G13580.3 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 206/240 (85.83%), Postives = 228/240 (95.00%), Query Frame = 0 

Query: 27  KASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYDEQQKEL 86
           ++  VVPESVLKKRKR EEWALA+K++L AAKK+NAE RKLIFNRAK Y+KEY E+++EL
Sbjct: 5   ESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKEREL 64

Query: 87  VRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 146
           ++LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA
Sbjct: 65  IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 124

Query: 147 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICTE 206
           T+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RTALTDNSI++Q LGK GIIC E
Sbjct: 125 TINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVE 184

Query: 207 DLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 266
           DLIHEI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 185 DLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]
BLAST of Cp4.1LG18g06580 vs. TAIR 10
Match: AT3G13580.2 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 206/240 (85.83%), Postives = 228/240 (95.00%), Query Frame = 0 

Query: 27  KASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYDEQQKEL 86
           ++  VVPESVLKKRKR EEWALA+K++L AAKK+NAE RKLIFNRAK Y+KEY E+++EL
Sbjct: 5   ESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKEREL 64

Query: 87  VRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 146
           ++LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA
Sbjct: 65  IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 124

Query: 147 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICTE 206
           T+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RTALTDNSI++Q LGK GIIC E
Sbjct: 125 TINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVE 184

Query: 207 DLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 266
           DLIHEI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 185 DLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]
BLAST of Cp4.1LG18g06580 vs. TAIR 10
Match: AT3G13580.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 206/240 (85.83%), Postives = 228/240 (95.00%), Query Frame = 0 

Query: 27  KASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYDEQQKEL 86
           ++  VVPESVLKKRKR EEWALA+K++L AAKK+NAE RKLIFNRAK Y+KEY E+++EL
Sbjct: 5   ESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKEREL 64

Query: 87  VRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 146
           ++LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA
Sbjct: 65  IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 124

Query: 147 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICTE 206
           T+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RTALTDNSI++Q LGK GIIC E
Sbjct: 125 TINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVE 184

Query: 207 DLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 266
           DLIHEI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 185 DLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]
BLAST of Cp4.1LG18g06580 vs. TAIR 10
Match: AT2G01250.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 418.7 bits (1075), Expect = 3.5e-117
Identity = 209/241 (86.72%), Postives = 228/241 (94.61%), Query Frame = 0 

Query: 26  VKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYDEQQKE 85
           V++  VVPESVLKKRKR EEWAL +K+++ AAKKKNAENRKLIF RA+ Y+KEY E++KE
Sbjct: 2   VESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKE 61

Query: 86  LVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 145
           L+ LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK
Sbjct: 62  LISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 121

Query: 146 ATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICT 205
           AT+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN +R ALTDNSI+EQALGK GIICT
Sbjct: 122 ATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICT 181

Query: 206 EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM 265
           EDLIHEILTVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INELIRRM
Sbjct: 182 EDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRM 241

Query: 266 N 267
           N
Sbjct: 242 N 242

[Close]
BLAST of Cp4.1LG18g06580 vs. TAIR 10
Match: AT2G44120.2 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 408.7 bits (1049), Expect = 3.6e-114
Identity = 205/243 (84.36%), Postives = 223/243 (91.77%), Query Frame = 0 

Query: 24  EGVKASPVVPESVLKKRKRNEEWALAEKKDLVAAKKKNAENRKLIFNRAKLYAKEYDEQQ 83
           E  ++  VVPESVLKK KR EEWALA+K + VAAKKK+ E RKLIF RA+ YAKEY E+ 
Sbjct: 5   EMAESKVVVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKD 64

Query: 84  KELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKV 143
            EL+RLKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKV
Sbjct: 65  NELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKV 124

Query: 144 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGII 203
           NKAT+NML RVEPYVTYGYPNLKSVKELIYKRG+GKLN +R ALTDNSI++QALGK GII
Sbjct: 125 NKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGII 184

Query: 204 CTEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIR 263
           C EDLIHEI+TVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INEL+R
Sbjct: 185 CVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVR 244

Query: 264 RMN 267
           RMN
Sbjct: 245 RMN 247

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g06580 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LHP12.9e-11685.8360S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1[more]
P600404.9e-11686.7260S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1[more]
P600396.7e-11386.4460S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1[more]
Q58DT11.1e-8061.1360S ribosomal protein L7 OS=Bos taurus OX=9913 GN=RPL7 PE=2 SV=1[more]
Q4R5061.5e-8061.4860S ribosomal protein L7 OS=Macaca fascicularis OX=9541 GN=RPL7 PE=2 SV=1[more]
BLAST of Cp4.1LG18g06580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589682.19.66e-17898.8760S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023516710.13.32e-171100.0060S ribosomal protein L7-2 [Cucurbita pepo subsp. pepo][more]
XP_022987336.19.52e-17199.5960S ribosomal protein L7-2 [Cucurbita maxima] >XP_022987339.1 60S ribosomal prot... [more]
KAG7023362.17.82e-17098.7860S ribosomal protein L7-4 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022921914.16.43e-16998.7860S ribosomal protein L7-2 [Cucurbita moschata] >XP_022921915.1 60S ribosomal pr... [more]
BLAST of Cp4.1LG18g06580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JDW24.61e-17199.5960S ribosomal protein L7-2 OS=Cucurbita maxima OX=3661 GN=LOC111484921 PE=3 SV=1[more]
A0A6J1E1W33.11e-16998.7860S ribosomal protein L7-2 OS=Cucurbita moschata OX=3662 GN=LOC111430031 PE=3 SV... [more]
A0A6J1ETP42.45e-16697.1560S ribosomal protein L7-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437634 PE... [more]
A0A6J1IG464.06e-16596.3460S ribosomal protein L7-4-like OS=Cucurbita maxima OX=3661 GN=LOC111473079 PE=3... [more]
A0A6J1C1C84.73e-16493.9060S ribosomal protein L7-2 OS=Momordica charantia OX=3673 GN=LOC111007372 PE=3 S... [more]
BLAST of Cp4.1LG18g06580 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13580.32.1e-11785.83Ribosomal protein L30/L7 family protein [more]
AT3G13580.22.1e-11785.83Ribosomal protein L30/L7 family protein [more]
AT3G13580.12.1e-11785.83Ribosomal protein L30/L7 family protein [more]
AT2G01250.13.5e-11786.72Ribosomal protein L30/L7 family protein [more]
AT2G44120.23.6e-11484.36Ribosomal protein L30/L7 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..96
NoneNo IPR availablePANTHERPTHR11524:SF4760S RIBOSOMAL PROTEIN L7-RELATEDcoord: 17..266
IPR005998Ribosomal protein L7, eukaryoticTIGRFAMTIGR01310TIGR01310coord: 33..266
e-value: 6.2E-101
score: 334.8
IPR012988Ribosomal protein L30, N-terminalPFAMPF08079Ribosomal_L30_Ncoord: 32..103
e-value: 2.5E-25
score: 88.5
IPR016082Ribosomal protein L30, ferredoxin-like fold domainPFAMPF00327Ribosomal_L30coord: 108..158
e-value: 8.8E-20
score: 70.4
IPR036919Ribosomal protein L30, ferredoxin-like fold domain superfamilyGENE3D3.30.1390.20coord: 107..266
e-value: 2.1E-33
score: 116.8
IPR036919Ribosomal protein L30, ferredoxin-like fold domain superfamilySUPERFAMILY55129Ribosomal protein L30p/L7ecoord: 107..266
IPR039699Ribosomal protein L7/L30PANTHERPTHR1152460S RIBOSOMAL PROTEIN L7coord: 17..266
IPR018038Ribosomal protein L30, conserved sitePROSITEPS00634RIBOSOMAL_L30coord: 126..158
IPR035808Ribosomal protein L7, eukaryotic/archaealCDDcd01657Ribosomal_L7_archeal_eukcoord: 107..266
e-value: 1.97568E-87
score: 255.144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g06580.1Cp4.1LG18g06580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome