Cp4.1LG18g06020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g06020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	pathogenesis-related protein PR-1-like
Location	Cp4.1LG18: 6398353 .. 6398862 (-)
RNA-Seq Expression	Cp4.1LG18g06020
Synteny	Cp4.1LG18g06020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCATATCTGCTCATCCCCATCGCCATTATTCTCACCCTCCTAAGCTCAATCGGCCTCGCCGCCGCAGCTTCGGTGAGGTCCGACAGAGTCCTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATACGCTCTCCGATTGGCCCCCTTGGTTTGGGACAACAAACTGGCTCGCTACGCACAGTGGTATGCGAACAAGCGGCGAGGGGATTGTGCCCTCCGTCACTCTGGCGGACCTTACGGTGAAAACATCTTCTGGGGCAGCGGCAATACATGGAATCCGGCACAGGCTGTGTCGGATTGGGTGTCGGAACGGAAGTGGTACAGTTATTGGGCCAATTCTTGCGTGGAGGGTGAACTGTGTGGGCATTATACTCAAATTGTGTGGCGGACGACACGCCGGATTGGGTGCGCTAGAGTCACCTGCTACGATGGTAAAGGCGTCTTCATCACTTGCAACTATGACCCTCCTGGTAATTACATCGGGGAGAGACCTTATTAA

mRNA sequence

ATGCATGCATATCTGCTCATCCCCATCGCCATTATTCTCACCCTCCTAAGCTCAATCGGCCTCGCCGCCGCAGCTTCGGTGAGGTCCGACAGAGTCCTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATACGCTCTCCGATTGGCCCCCTTGGTTTGGGACAACAAACTGGCTCGCTACGCACAGTGGTATGCGAACAAGCGGCGAGGGGATTGTGCCCTCCGTCACTCTGGCGGACCTTACGGTGAAAACATCTTCTGGGGCAGCGGCAATACATGGAATCCGGCACAGGCTGTGTCGGATTGGGTGTCGGAACGGAAGTGGTACAGTTATTGGGCCAATTCTTGCGTGGAGGGTGAACTGTGTGGGCATTATACTCAAATTGTGTGGCGGACGACACGCCGGATTGGGTGCGCTAGAGTCACCTGCTACGATGGTAAAGGCGTCTTCATCACTTGCAACTATGACCCTCCTGGTAATTACATCGGGGAGAGACCTTATTAA

Coding sequence (CDS)

ATGCATGCATATCTGCTCATCCCCATCGCCATTATTCTCACCCTCCTAAGCTCAATCGGCCTCGCCGCCGCAGCTTCGGTGAGGTCCGACAGAGTCCTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATACGCTCTCCGATTGGCCCCCTTGGTTTGGGACAACAAACTGGCTCGCTACGCACAGTGGTATGCGAACAAGCGGCGAGGGGATTGTGCCCTCCGTCACTCTGGCGGACCTTACGGTGAAAACATCTTCTGGGGCAGCGGCAATACATGGAATCCGGCACAGGCTGTGTCGGATTGGGTGTCGGAACGGAAGTGGTACAGTTATTGGGCCAATTCTTGCGTGGAGGGTGAACTGTGTGGGCATTATACTCAAATTGTGTGGCGGACGACACGCCGGATTGGGTGCGCTAGAGTCACCTGCTACGATGGTAAAGGCGTCTTCATCACTTGCAACTATGACCCTCCTGGTAATTACATCGGGGAGAGACCTTATTAA

Protein sequence

MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVEGELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY

Homology

[Close]

BLAST of Cp4.1LG18g06020 vs. ExPASy Swiss-Prot
Match: Q40374 (Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.2e-60
Identity = 101/161 (62.73%), Postives = 123/161 (76.40%), Query Frame = 0


Query: 11  IILTLLSSIGLAAAASVRS--DRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYAN 70
           ++LT +S +  +   + +S   R  + QFL P N AR A+ L PLVWD+KL  YAQWYAN
Sbjct: 13  LLLTFISHVSASYIPNKKSFKSRSFKNQFLIPQNIARAAVGLRPLVWDDKLTHYAQWYAN 72

Query: 71  KRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVEGELCGHYT 130
           +RR DCAL HS GPYGENIFWGSG  WNPAQAVS WV E+++Y+YW NSCV+GE+CGHYT
Sbjct: 73  QRRNDCALEHSNGPYGENIFWGSGVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYT 132

Query: 131 QIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 170
           Q+VW +T ++GCA V C D KG F+TCNYDPPGNY GERPY
Sbjct: 133 QVVWGSTTKVGCASVVCSDDKGTFMTCNYDPPGNYYGERPY 173

[Close]

BLAST of Cp4.1LG18g06020 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-46
Identity = 82/159 (51.57%), Postives = 114/159 (71.70%), Query Frame = 0


Query: 13  LTLLSSIGLAAA-ASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRR 72
           L +L ++ +AAA  ++   +   + ++ PHNAAR A+ +  + W  KL  +AQ YAN+R 
Sbjct: 6   LAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRI 65

Query: 73  GDCALRHSGGPYGENIFWGS-GNTWNPAQAVSDWVSERKWYSYWANSCVEGELCGHYTQI 132
            DC L+HSGGPYGENIFWGS G  W  A AV+ WV+E+K Y+Y +N+C  G++CGHYTQ+
Sbjct: 66  NDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQV 125

Query: 133 VWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 170
           VWR +  IGCARV C + +GVFITCNY+P GN +G++PY
Sbjct: 126 VWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cp4.1LG18g06020 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-46
Identity = 83/159 (52.20%), Postives = 113/159 (71.07%), Query Frame = 0


Query: 13  LTLLSSIGLAAA-ASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRR 72
           L +L ++ +AAA  ++   +   + ++ PHNAAR A+ +  + W  KL  +AQ YAN+R 
Sbjct: 6   LAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRI 65

Query: 73  GDCALRHSGGPYGENIFWGS-GNTWNPAQAVSDWVSERKWYSYWANSCVEGELCGHYTQI 132
            DC L+HSGGPYGENIFWGS G  W  + AV+ WVSE+K Y Y +N+C  G++CGHYTQ+
Sbjct: 66  NDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQV 125

Query: 133 VWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 170
           VWR +  IGCARV C + +GVFITCNY+P GN IG++PY
Sbjct: 126 VWRASTSIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

[Close]

BLAST of Cp4.1LG18g06020 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-45
Identity = 83/162 (51.23%), Postives = 112/162 (69.14%), Query Frame = 0


Query: 9   IAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYAN 68
           + I+L L  S   AA  ++   +   + ++ PHNAAR A+ +  + W  KL  +AQ YAN
Sbjct: 6   LVILLALAMS---AAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYAN 65

Query: 69  KRRGDCALRHSGGPYGENIFWGS-GNTWNPAQAVSDWVSERKWYSYWANSCVEGELCGHY 128
           +R  DC L+HSGGPYGENIFWGS G  W  + AV+ WVSE+K Y Y +N+C  G++CGHY
Sbjct: 66  QRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHY 125

Query: 129 TQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 170
           TQ+VWR +  IGCARV C + +GVFITCNY+P GN +G++PY
Sbjct: 126 TQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cp4.1LG18g06020 vs. ExPASy Swiss-Prot
Match: Q00008 (Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.9e-45
Identity = 83/161 (51.55%), Postives = 107/161 (66.46%), Query Frame = 0


Query: 12  ILTLLSSIGLAAAASVRS--DRVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANK 71
           +  LL  + +AAA +V         + +L P N+AR A+ + P+ W  KL ++A+ YA +
Sbjct: 7   LAVLLLWLVMAAATAVHPSYSENSPQDYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAAQ 66

Query: 72  RRGDCALRHSGGPYGENIFWGS-GNTWNPAQAVSDWVSERKWYSYWANSCVEGELCGHYT 131
           R GDC L+HSGGPYGENIFWGS G  W    AV  WV E++WY+Y  NSC  G++CGHYT
Sbjct: 67  RAGDCRLQHSGGPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHYT 126

Query: 132 QIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 170
           Q+VWR T  IGCARV C D +GVFI CNY+P GN  G +PY
Sbjct: 127 QVVWRATTSIGCARVVCRDNRGVFIICNYEPRGNIAGMKPY 167

[Close]

BLAST of Cp4.1LG18g06020 vs. NCBI nr
Match: XP_023516778.1 (pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363 bits (933), Expect = 3.71e-127
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169
           GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Cp4.1LG18g06020 vs. NCBI nr
Match: XP_022988522.1 (pathogenesis-related protein PR-1-like [Cucurbita maxima])

HSP 1 Score: 350 bits (897), Expect = 1.15e-121
Identity = 163/169 (96.45%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAIILTLLSS G AAAA VRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQWYANKRRGDCALRHSGGPYGENIFWGSGN WNPAQAVSDWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169
           GELCGHYTQIVWR+TRRIGCARVTC DGKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Cp4.1LG18g06020 vs. NCBI nr
Match: XP_022921796.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata])

HSP 1 Score: 345 bits (885), Expect = 7.78e-120
Identity = 162/169 (95.86%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAIILTLLSS G AAAA VRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQWYANKRRGDCALRHSGGPYGENIFWGSGN WNPAQAVSDWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169
           GEL GHYTQIVWR+TRRIGCARVTC DGKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Cp4.1LG18g06020 vs. NCBI nr
Match: XP_008453637.1 (PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo] >KAA0056235.1 pathogenesis-related protein PR-1 [Cucumis melo var. makuwa] >TYK09488.1 pathogenesis-related protein PR-1 [Cucumis melo var. makuwa])

HSP 1 Score: 323 bits (828), Expect = 4.11e-111
Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1   MHAYLLI--PIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNK 60
           MHA+ LI  PIA IL LL+S G  AAA  RSDR+LQKQFLGPHNAARYALRL+PLVWD+K
Sbjct: 1   MHAHFLIIIPIATILLLLTSTGCTAAARSRSDRILQKQFLGPHNAARYALRLSPLVWDSK 60

Query: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSC 120
           LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGN W PAQAV+DWVSERKWYSYWANSC
Sbjct: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNEWTPAQAVADWVSERKWYSYWANSC 120

Query: 121 VEGELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169
           VEGELCGHYTQIVWR+TRRIGCARVTC DGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 VEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171

[Close]

BLAST of Cp4.1LG18g06020 vs. NCBI nr
Match: XP_022929438.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata] >XP_023529539.1 pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316 bits (809), Expect = 2.92e-108
Identity = 148/169 (87.57%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           M AYLLIPIAI + LLSS G A AA V+SD+ LQKQFLGPHNAARYALRLAPLVWD KLA
Sbjct: 1   MQAYLLIPIAIFI-LLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQ YANKRRGDCALRHS GPYGENIFWGSGN W+PAQAV+DWVSERKWYSYW+NSCVE
Sbjct: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVE 120

Query: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169
           GELCGHYTQIVWR+TRRIGCARVTC  GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCKQGKGVFITCNYDPPGNYIGERPY 168

[Close]

BLAST of Cp4.1LG18g06020 vs. ExPASy TrEMBL
Match: A0A6J1JD89 (pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485737 PE=4 SV=1)

HSP 1 Score: 350 bits (897), Expect = 5.57e-122
Identity = 163/169 (96.45%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAIILTLLSS G AAAA VRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQWYANKRRGDCALRHSGGPYGENIFWGSGN WNPAQAVSDWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169
           GELCGHYTQIVWR+TRRIGCARVTC DGKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Cp4.1LG18g06020 vs. ExPASy TrEMBL
Match: A0A6J1E2D3 (pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC111429942 PE=4 SV=1)

HSP 1 Score: 345 bits (885), Expect = 3.77e-120
Identity = 162/169 (95.86%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAIILTLLSS G AAAA VRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQWYANKRRGDCALRHSGGPYGENIFWGSGN WNPAQAVSDWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169
           GEL GHYTQIVWR+TRRIGCARVTC DGKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Cp4.1LG18g06020 vs. ExPASy TrEMBL
Match: A0A5D3CE49 (Pathogenesis-related protein PR-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00870 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.99e-111
Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1   MHAYLLI--PIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNK 60
           MHA+ LI  PIA IL LL+S G  AAA  RSDR+LQKQFLGPHNAARYALRL+PLVWD+K
Sbjct: 1   MHAHFLIIIPIATILLLLTSTGCTAAARSRSDRILQKQFLGPHNAARYALRLSPLVWDSK 60

Query: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSC 120
           LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGN W PAQAV+DWVSERKWYSYWANSC
Sbjct: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNEWTPAQAVADWVSERKWYSYWANSC 120

Query: 121 VEGELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169
           VEGELCGHYTQIVWR+TRRIGCARVTC DGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 VEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171

[Close]

BLAST of Cp4.1LG18g06020 vs. ExPASy TrEMBL
Match: A0A1S3BWR0 (pathogenesis-related protein PR-1 OS=Cucumis melo OX=3656 GN=LOC103494292 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.99e-111
Identity = 150/171 (87.72%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1   MHAYLLI--PIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNK 60
           MHA+ LI  PIA IL LL+S G  AAA  RSDR+LQKQFLGPHNAARYALRL+PLVWD+K
Sbjct: 1   MHAHFLIIIPIATILLLLTSTGCTAAARSRSDRILQKQFLGPHNAARYALRLSPLVWDSK 60

Query: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSC 120
           LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGN W PAQAV+DWVSERKWYSYWANSC
Sbjct: 61  LARYAQWYANKRRGDCALRHSGGPYGENIFWGSGNEWTPAQAVADWVSERKWYSYWANSC 120

Query: 121 VEGELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169
           VEGELCGHYTQIVWR+TRRIGCARVTC DGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 VEGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 171

[Close]

BLAST of Cp4.1LG18g06020 vs. ExPASy TrEMBL
Match: A0A6J1ES44 (pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC111436010 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 1.42e-108
Identity = 148/169 (87.57%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           M AYLLIPIAI + LLSS G A AA V+SD+ LQKQFLGPHNAARYALRLAPLVWD KLA
Sbjct: 1   MQAYLLIPIAIFI-LLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLA 60

Query: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120
           RYAQ YANKRRGDCALRHS GPYGENIFWGSGN W+PAQAV+DWVSERKWYSYW+NSCVE
Sbjct: 61  RYAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVE 120

Query: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169
           GELCGHYTQIVWR+TRRIGCARVTC  GKGVFITCNYDPPGNYIGERPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCKQGKGVFITCNYDPPGNYIGERPY 168

[Close]

BLAST of Cp4.1LG18g06020 vs. TAIR 10
Match: AT4G30320.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 218.4 bits (555), Expect = 4.4e-57
Identity = 92/136 (67.65%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 34  QKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRHSGGPYGENIFWGSGN 93
           Q+QF+GP NAAR  LRL PL WD KLARYAQW+AN+RRGDCAL HS GPYGEN+FWGSGN
Sbjct: 27  QEQFMGPQNAARAHLRLKPLKWDAKLARYAQWWANQRRGDCALTHSNGPYGENLFWGSGN 86

Query: 94  TWNPAQAVSDWVSERKWYSYWANSCVEGELCGHYTQIVWRTTRRIGCARVTCYDGKGVFI 153
            W P+QA   W+SE + Y+Y +NSC   E+CGHYTQIVW+ T++IGCA V C  G GVF+
Sbjct: 87  RWGPSQAAYGWLSEARSYNYRSNSC-NSEMCGHYTQIVWKNTQKIGCAHVICNGGGGVFL 146

Query: 154 TCNYDPPGNYIGERPY 170
           TCNYDPPGN++G +PY
Sbjct: 147 TCNYDPPGNFLGRKPY 161

[Close]

BLAST of Cp4.1LG18g06020 vs. TAIR 10
Match: AT5G57625.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 205.7 bits (522), Expect = 3.0e-53
Identity = 85/137 (62.04%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 33  LQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRHSGGPYGENIFWGSG 92
           + + FL PHNA R  L L PL+WD KLA YA W+AN+RR DC+L HS GPYGEN+FWGSG
Sbjct: 71  IARLFLDPHNALRSGLGLPPLIWDGKLASYATWWANQRRYDCSLTHSTGPYGENLFWGSG 130

Query: 93  NTWNPAQAVSDWVSERKWYSYWANSCVEGELCGHYTQIVWRTTRRIGCARVTCYDGKGVF 152
           ++W P  AV  W+ E + Y++  NSC    +CGHYTQ+VWR T+R+GCARV C +G GVF
Sbjct: 131 SSWAPGFAVQSWIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKRLGCARVVCENGAGVF 190

Query: 153 ITCNYDPPGNYIGERPY 170
           ITCNYDPPGNY+GE+PY
Sbjct: 191 ITCNYDPPGNYVGEKPY 207

[Close]

BLAST of Cp4.1LG18g06020 vs. TAIR 10
Match: AT4G25790.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 201.1 bits (510), Expect = 7.3e-52
Identity = 85/136 (62.50%), Postives = 102/136 (75.00%), Query Frame = 0


Query: 34  QKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRHSGGPYGENIFWGSGN 93
           ++QFL PHN  R  L L PLVWD K+A YA W+AN+RR DC+L HS GPYGEN+FWGSG+
Sbjct: 75  EQQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGPYGENLFWGSGS 134

Query: 94  TWNPAQAVSDWVSERKWYSYWANSCVEGELCGHYTQIVWRTTRRIGCARVTCYDGKGVFI 153
            +    AV  W  E K Y++  N+C    +CGHYTQIVWR TRR+GCARV C +G GVFI
Sbjct: 135 DFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENGAGVFI 194

Query: 154 TCNYDPPGNYIGERPY 170
           TCNYDPPGNY+GE+PY
Sbjct: 195 TCNYDPPGNYVGEKPY 210

[Close]

BLAST of Cp4.1LG18g06020 vs. TAIR 10
Match: AT4G25780.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 4.9e-48
Identity = 83/138 (60.14%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 36  QFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRH--SGGPY--GENIFWGS 95
           QFL  HN  R A    PL+WD +L  YAQ +AN+RRGDCALRH  S G +  GENI+WG 
Sbjct: 54  QFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGY 113

Query: 96  GNTWNPAQAVSDWVSERKWYSYWANSCVEGELCGHYTQIVWRTTRRIGCARVTCYDGKGV 155
           G  W+PA AV  W SE+++Y Y +N+C  G++CGHYTQIVW++TRR+GCARV C D  G+
Sbjct: 114 GANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVC-DNGGI 173

Query: 156 FITCNYDPPGNYIGERPY 170
           F+TCNYDPPGNYIG++PY
Sbjct: 174 FMTCNYDPPGNYIGQKPY 190

[Close]

BLAST of Cp4.1LG18g06020 vs. TAIR 10
Match: AT4G31470.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 5.2e-42
Identity = 76/137 (55.47%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 33  LQKQFLGPHNAARYALRLAPLVWDNKLARYAQWYANKRRGDCALRHSGGPYGENIFWGSG 92
           +Q+QFL PHN  R  LRL PL W N LA YA  +A  RRGDC L HSGGPYGEN+FWGSG
Sbjct: 50  IQQQFLRPHNILRAKLRLPPLKWSNSLALYASRWARTRRGDCKLIHSGGPYGENLFWGSG 109

Query: 93  NTWNPAQAVSDWVSERKWYSYWANSCVEGELCGHYTQIVWRTTRRIGCARVTCYDGKGVF 152
             W P  AV+ W SE K+Y    + C     C HYTQ+VW+ + RIGCA   C  G   F
Sbjct: 110 KGWTPRDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKKSSRIGCAISFCKTG-DTF 169

Query: 153 ITCNYDPPGNYIGERPY 170
           I CNYDPPGN +G+ P+
Sbjct: 170 IICNYDPPGNIVGQPPF 185

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g06020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40374	3.2e-60	62.73	Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV...	[more]
P35792	4.5e-46	51.57	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q05968	4.5e-46	52.20	Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P35793	1.7e-45	51.23	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q00008	2.9e-45	51.55	Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1	[more]

BLAST of Cp4.1LG18g06020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516778.1	3.71e-127	100.00	pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022988522.1	1.15e-121	96.45	pathogenesis-related protein PR-1-like [Cucurbita maxima]	[more]
XP_022921796.1	7.78e-120	95.86	pathogenesis-related protein PR-1-like [Cucurbita moschata]	[more]
XP_008453637.1	4.11e-111	87.72	PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo] >KAA0056235.1 pathog...	[more]
XP_022929438.1	2.92e-108	87.57	pathogenesis-related protein PR-1-like [Cucurbita moschata] >XP_023529539.1 path...	[more]

BLAST of Cp4.1LG18g06020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JD89	5.57e-122	96.45	pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC1114857...	[more]
A0A6J1E2D3	3.77e-120	95.86	pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC11142...	[more]
A0A5D3CE49	1.99e-111	87.72	Pathogenesis-related protein PR-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BWR0	1.99e-111	87.72	pathogenesis-related protein PR-1 OS=Cucumis melo OX=3656 GN=LOC103494292 PE=4 S...	[more]
A0A6J1ES44	1.42e-108	87.57	pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of Cp4.1LG18g06020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30320.1	4.4e-57	67.65	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT5G57625.1	3.0e-53	62.04	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G25790.1	7.3e-52	62.50	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G25780.1	4.9e-48	60.14	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G31470.1	5.2e-42	55.47	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 152..165 score: 55.56 coord: 53..71 score: 42.05 coord: 100..113 score: 36.99 coord: 124..140 score: 61.61
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 19..169
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 53..71 score: 46.38 coord: 123..142 score: 55.31 coord: 98..113 score: 26.95
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 32..165 e-value: 4.8E-57 score: 205.5
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 40..157 e-value: 2.9E-23 score: 83.1
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 32..169 e-value: 4.7E-43 score: 148.8
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 26..169
None	No IPR available	PANTHER	PTHR10334:SF489	CYSTEINE-RICH SECRETORY PROTEIN, ALLERGEN V5/TPX-1-RELATED PROTEIN-RELATED	coord: 19..169
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 34..169 e-value: 1.50727E-87 score: 250.629
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 125..135
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 152..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g06020.1	Cp4.1LG18g06020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005576	extracellular region