Cp4.1LG18g05200 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g05200
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	E3 ubiquitin-protein ligase RNF12-A-like isoform X1
Location	Cp4.1LG18: 5990311 .. 5995459 (+)
RNA-Seq Expression	Cp4.1LG18g05200
Synteny	Cp4.1LG18g05200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACATTTTAATTTTTATGTCGAATTTCAAATACAAAATAAAAAATTTGTAAATAAAAAACAAAATAATCTTAATTTCTTCACGGCCGCAGCCATAGCAACGAAGGTCTCCTCCAAAAGCTCGATGTCGAGAGCTATGGCGACATGACACCTCTGAACTCCATTTTTAATGGGAAGAAACCTTCGAAGCCAGCCTTTTAGAAGTACAAAAAGGTATGGATAATATTATAATAAAGTTTCAAAAAATGAAAGGAATTATTGCTATACCACGAACTTCCCATTCCGATCAATCGAATTATTGGTTTTCGATTGAATTTGGAATCAGAGAGGTCTGAATTCAATTTCGTGTTCTTCAAATCTCTGTCGTCTTCATCCATACGGATCATCGCTTCTTATCCAAATCCCTAATGGGTTCGAGTTGTAGTCGTTTGGGGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAAATTCTGCTCTCTCTTCTGTGGTGCTTCATCTTCTCGCGCGATTCATCAGGTTGTTTTTCTTCCTCTAATCTTATTGTTTTTATTATCATCATCGAATCTTTTGTTCTCTCTTGTTTACTCTTTCTCCCATTTCTTGCGATTCTTCGTGAACTTGAATCTATTTCGTCCTTGGAAATCTTGTTTGGATAATCTGAGATTGACTATCTTCATTTCAAAGGTTGACCTCTTGATTGAAGTCTTGTGTCCGTTTGGTTTGCTTTTTAGTTGCTTGAAGCTCTGGTGTTGCATTTTGGGGGATTTTGGATGAGTTTTGATCTACCAAGTGAAGAAAATCGGTGTATCTCTCATAAATTAGGTCCGATTCTGTAGCTTTTGTGATATGTTTGTGTCTGTTTGCTGTTTGTTTTGCCTGTGAGTGGGATGATGATTTGGCTATGCTTATATTGTTCATCTTCGTGGCAATATCTTAGTAGAAATCTTTTGTTCTCTCAATTATTATTAGTTTCAATCATCTATGTTGTTGTCTTGATCTCTCAAAAAGAAGTTTGTCTTTTGCTCTCGTTTTGCAAGTTTTAACAAGTTTAGATGACGGATTAAATCTTTAGCTGACACATATTTTAAATAGATGGAAGATTCTACAGCTCAATTTCTTGTCCATCCGACAGAACATGAACATTGTAATCACATCATTGATGAAGTTCAACTCCCCACAAATGGATCTATAAGAACGGGGCTTCCTAGCGCAAGCGCTTATTCCGAGACCTTGCACGAGAACAGGATTGCAGTCAGTGAGGAGCAATGTGGTGTAGATGAACCAAGAAATATTGATATCAATGATCATGGGAAGTGTTTGTCTCAAAACAAGGAATTAGTTCCACTTCAACAGATTAGTGCTGATTACAGTCACGATGAATCTCGTAGACATAGAGATCGATCTTCGGAACCAGTATCTGTAAATATTCTGGCTAACGAGGATGCAGTAAATGGTATTGATAGTTCAGTGGACAAGGGTGTATCTCCAGTCTGCACCAAGGTCATGTTTGCGGCAAGTAGCTCGACTACTCAAGAGGTTGGAGACTTATGTTCGAATGAGCTGACAGGTTACATTCAAGAGGATGAGGGAACAGGCAACCAGAACCCGGAGTCTGAATCTTCTCCTGATTCGGATCTTCCGTTAACTTTTCAATCCCTTGAAGACGAATCTTCACGAGAGGTACCCTCGAGTTTAGACACTTTTGTGTCTGATGATAGGGAGGCAGGAGATGTGGGTATGCCTCATGTCGATATGGTCGGTATTTCTTCCAACGTTTTATCTACAAGTAGCATTGATGCAAATTCTCTTATGATCAGAAGGAATAGCAGAAGACTGTTTTGGGATGCCTTTTCAAGACGTAGTTTTAGAAGACATAGTGAATCTCCGTTTCTTTTCCCTCCTAATAACATAAGTACTACAGGAGATTCAGACCGGTGGCTCCTCGATATAAGTGGTGATTTTATCGATGATGAAGTGCGTGGCGATTCAAGACATTTTCCCAGAAGAATTCACATCTTGAATGAACAACAAAGAGACTCAAGATCCCAGGTTACATTCTTAATGTTCTATATTTTCCTTTTGAGTAGTAATTGAACCTTGTTCTGTTTATTCATGATTGCTTCTCAAATAGGTGCAGATATGGGAAAGACTCCGTAGTAGTCTCAGCGAAAACAGTCGGCAGAACTTATCTTGCCCGTCAGGCATTCACTCTAATGGTGCTTGCTCGTGTGACTCGTTCTCAAGGATAGAACACTCGAGTACCCGTGCAAGCATATCGCGGATAATCATGCTTGCTGAAGCATTATTTGAGGTAGTCTTCCCCTGTTCAAATTCTTTAAATTTTAAGATGATATTGTGTTAAGTAAACCATACATTACTGTTTAAAGTTCACTTTAATTGGAACTCTATGTATGAGATCCCACATCGGTTGGAGAGGGGAACAAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGAGGCTGACGGTGATATGTAATGAGCCAAAGCAGACAATATCTGCTAGCGGTGGCCTTGGCCTGTTATAAACGGTATCAGCGCCAGACAACGGACGGTGTGCCGGCCAGGATTCTGGACCCTAAGGGGGATGGATTGTGAGATCCGACGTCGGTTGGAGAGGGGAACAAAGCATTCTGTATAAAGGTGTGGAAACCTCTCCCTAGTAGACACATTTTAAAACCGTTAGACTGACGGTGATACGTAACGGGCCAAAGCGGACAATATCTTCTAGCGGTGGGCTTGGGTTGTTACACTATGCCACTGGATATTTCTGATAAACGTTTTTGCACTTGAGCATCGCCCACTTTTCGGAGTTTTATTGCTGTATTTGAACAATGATCTCACATCTTCTTCTCTGTGTATTTGAAGGTGTTGGATGAAATTCACGGTCAGCCTGTTTCTCTTGCCCTCTCCATGGTTTCACTCCCTGCACCCGAATCAGTTGTCGACTCTTTTCCTCTGAAGAACCACGAAAAGACGACTAATGGAGGGGACGAAATTGAGCAGTAGGCTTCCTCTTTCCATTAACTAAATACATTTGCCTGGCTGGCTGAGTCCATAGTTTTACTTGCTTATTACTTGTTTAGTTTCTAATTTGGGATTGTGTTACAAAAATTGGTTAGATGCTACATTTGCCTGGCTGAATACGAAGAGGGCGATAAAATAAGAGTCCTTCCCTGCCGACACGAGTACCATATGTTGTGTGTCGATAAATGGTTGAAGGAGATTCACGGGTATGTCACACATACTCGACGACAATCACTGCTCTCTCCTTGTATCATTTTATTCTTCAACTCATCTCCTAATATCGCTGTGTTTAACAGAGTATGCCCGCTTTGCCGAGGGGATGTTCGTGCGGGCTCAAACGATGAATGTTCTGTTTCAAACCCTGAAATTCCAACAATTTGATGGCATTGTATAGCAAAAACAGAACACTCATTCATTATCATGTTTCCTTTTAATACTTGGGGATTAATTGGATCCCCATGTTTTGATTTTGTAAGGCATTCATATTGTATAGCAGTTTCAGAAGAATTTGAATGAATATATATATATCTAGAACAAGCAGTTTGGTTTGAATGATTCAAACACTTGTACAAAAGGGCGGGAATGACACCGAACGAAGAAACTGTGTCGATAACAGATAACCGAGACAAGGAGACAGCAATGTAAGCTGTCTCTGCTTAGAACAACAACTCTACTTGAGCATTGAAAGACCAGTGCTTGGTCTCCAAAATGGATTCTCATAGACAGGATCCGATCTCATCGGATCGTTTATGTTGTTGAAGAGATTTGGATGGCAGTTCTCGTCGTCTTCAAACGTCGTCCATCTCATCGAATTGCTGCTATTACGTCGTTTCTCGCTCGCTGCATTTCTCATATTCTCCATCTCTCCCACATGATCCTTGAACTCTTTCTTCACCACATCAATTACTACATCCCCATAACGATCGCACCATGATCTAATGAGGGAAAAAAAAAAAAAAAACAACAGTTCATCAAAATACTGACTTTGATCGCACCATGAACTTATAAAATGAAGATCGGATCTTACTTTGGGAAGAAGTTCTTGAGGTCGGCTTTGTCGATCGGAAGCCTAGTGGAAATTGCCTCAATTTGATCATCCCTGAAATTTGAAACGATTTAAAAGAAGAACAAAAACAGAGGAAAGGGACAGCAAAAATGAACTTTGAAGATCTTACGAGAATTTAAGGTTTGGATTTGTGTCGTTGAGCTCTGTTTGAATTCGTGAAAGCTCTTTCTTTATGTTCTCGCTTAAAACCTTCAAACAAAATTAGAACACGATGAACAGAATCAAAAACTTGAAATTTACAGACAGGCCAACGCCATTGAAGCAGTTCATTACCTTGTCGATGAAGAAATCCGATGGAGACCCATTTGAATTCAACTTCATTTTCATCATTTTAGTGTTGGGCCCCTCCCCAATTGGACTCGTTGCGAGCTGAGCTGAATTTGAAGAACCCCAAAAAGCTTCACTGTCGGATCTTTCATGGAGTGGCAATGGAGCTGTCTCATCCTCTGTTTGGTCTCGTTTCCATTTCTTTAGCCCATTGAAACCCCATTGTTTTTTTCCAGATTTGTTCATCCGTTCTTCATAATCTGGACCATAATTTCCACCGCCGCCATTGCCGCCCTGAAACAGAGCTTTAAAGGGTCGTCGTTTTGCCTTTTCTTCACTCATCTCCTTGTTTGATGAACTTTCCGACATCAGAATCGAATGGGTATCACTGATATTACACAGATTTTCAGATTCAAAAATACTTTTCTCTTTTCTGTTCCTCTCTGTTTTTTGTGATGACGCGAAACTAAAAACCGACGCAGCTCCTCTGATCTGTTTCATACCCAACATAACCTTTGATCTGTTCTTCGAATTTGAGTTCGATTTCAGTGAAGAATTTTCATCTCTCAAGTCAATAATCGACCATTCTTCTTCTAAAATCTCCTTCGAATTCTCTTTTGGGTCAGCTACAATCACATCCCTGGCCTCAATTTCAGCTCCTTGAACTGCTAATCTCTGAAGCAGAGGCCTCTTCGAAGAGTGATACTCATCTGTTGTTATGCATTTCGCATAAAGAA

mRNA sequence

ACACATTTTAATTTTTATGTCGAATTTCAAATACAAAATAAAAAATTTGTAAATAAAAAACAAAATAATCTTAATTTCTTCACGGCCGCAGCCATAGCAACGAAGGTCTCCTCCAAAAGCTCGATGTCGAGAGCTATGGCGACATGACACCTCTGAACTCCATTTTTAATGGGAAGAAACCTTCGAAGCCAGCCTTTTAGAAGTACAAAAAGGTATGGATAATATTATAATAAAGTTTCAAAAAATGAAAGGAATTATTGCTATACCACGAACTTCCCATTCCGATCAATCGAATTATTGGTTTTCGATTGAATTTGGAATCAGAGAGGTCTGAATTCAATTTCGTGTTCTTCAAATCTCTGTCGTCTTCATCCATACGGATCATCGCTTCTTATCCAAATCCCTAATGGGTTCGAGTTGTAGTCGTTTGGGGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAAATTCTGCTCTCTCTTCTGTGGTGCTTCATCTTCTCGCGCGATTCATCAGATGGAAGATTCTACAGCTCAATTTCTTGTCCATCCGACAGAACATGAACATTGTAATCACATCATTGATGAAGTTCAACTCCCCACAAATGGATCTATAAGAACGGGGCTTCCTAGCGCAAGCGCTTATTCCGAGACCTTGCACGAGAACAGGATTGCAGTCAGTGAGGAGCAATGTGGTGTAGATGAACCAAGAAATATTGATATCAATGATCATGGGAAGTGTTTGTCTCAAAACAAGGAATTAGTTCCACTTCAACAGATTAGTGCTGATTACAGTCACGATGAATCTCGTAGACATAGAGATCGATCTTCGGAACCAGTATCTGTAAATATTCTGGCTAACGAGGATGCAGTAAATGGTATTGATAGTTCAGTGGACAAGGGTGTATCTCCAGTCTGCACCAAGGTCATGTTTGCGGCAAGTAGCTCGACTACTCAAGAGGTTGGAGACTTATGTTCGAATGAGCTGACAGGTTACATTCAAGAGGATGAGGGAACAGGCAACCAGAACCCGGAGTCTGAATCTTCTCCTGATTCGGATCTTCCGTTAACTTTTCAATCCCTTGAAGACGAATCTTCACGAGAGGTACCCTCGAGTTTAGACACTTTTGTGTCTGATGATAGGGAGGCAGGAGATGTGGGTATGCCTCATGTCGATATGGTCGGTATTTCTTCCAACGTTTTATCTACAAGTAGCATTGATGCAAATTCTCTTATGATCAGAAGGAATAGCAGAAGACTGTTTTGGGATGCCTTTTCAAGACGTAGTTTTAGAAGACATAGTGAATCTCCGTTTCTTTTCCCTCCTAATAACATAAGTACTACAGGAGATTCAGACCGGTGGCTCCTCGATATAAGTGGTGATTTTATCGATGATGAAGTGCGTGGCGATTCAAGACATTTTCCCAGAAGAATTCACATCTTGAATGAACAACAAAGAGACTCAAGATCCCAGGTGCAGATATGGGAAAGACTCCGTAGTAGTCTCAGCGAAAACAGTCGGCAGAACTTATCTTGCCCGTCAGGCATTCACTCTAATGGTGCTTGCTCGTGTGACTCGTTCTCAAGGATAGAACACTCGAGTACCCGTGCAAGCATATCGCGGATAATCATGCTTGCTGAAGCATTATTTGAGGTGTTGGATGAAATTCACGGTCAGCCTGTTTCTCTTGCCCTCTCCATGGTTTCACTCCCTGCACCCGAATCAGTTGTCGACTCTTTTCCTCTGAAGAACCACGAAAAGACGACTAATGGAGGGGACGAAATTGAGCAATGCTACATTTGCCTGGCTGAATACGAAGAGGGCGATAAAATAAGAGTCCTTCCCTGCCGACACGAGTACCATATGTTGTGTGTCGATAAATGGTTGAAGGAGATTCACGGAGTATGCCCGCTTTGCCGAGGGGATGTTCGTGCGGGCTCAAACGATGAATGTTCTGTTTCAAACCCTGAAATTCCAACAATTTGATGGCATTGTATAGCAAAAACAGAACACTCATTCATTATCATGTTTCCTTTTAATACTTGGGGATTAATTGGATCCCCATGTTTTGATTTTGTAAGGCATTCATATTGTATAGCAGTTTCAGAAGAATTTGAATGAATATATATATATCTAGAACAAGCAGTTTGGTTTGAATGATTCAAACACTTGTACAAAAGGGCGGGAATGACACCGAACGAAGAAACTGTGTCGATAACAGATAACCGAGACAAGGAGACAGCAATGTAAGCTGTCTCTGCTTAGAACAACAACTCTACTTGAGCATTGAAAGACCAGTGCTTGGTCTCCAAAATGGATTCTCATAGACAGGATCCGATCTCATCGGATCGTTTATGTTGTTGAAGAGATTTGGATGGCAGTTCTCGTCGTCTTCAAACGTCGTCCATCTCATCGAATTGCTGCTATTACGTCGTTTCTCGCTCGCTGCATTTCTCATATTCTCCATCTCTCCCACATGATCCTTGAACTCTTTCTTCACCACATCAATTACTACATCCCCATAACGATCGCACCATGATCTAATGAGGGAAAAAAAAAAAAAAAACAACAGTTCATCAAAATACTGACTTTGATCGCACCATGAACTTATAAAATGAAGATCGGATCTTACTTTGGGAAGAAGTTCTTGAGGTCGGCTTTGTCGATCGGAAGCCTAGTGGAAATTGCCTCAATTTGATCATCCCTGAAATTTGAAACGATTTAAAAGAAGAACAAAAACAGAGGAAAGGGACAGCAAAAATGAACTTTGAAGATCTTACGAGAATTTAAGGTTTGGATTTGTGTCGTTGAGCTCTGTTTGAATTCGTGAAAGCTCTTTCTTTATGTTCTCGCTTAAAACCTTCAAACAAAATTAGAACACGATGAACAGAATCAAAAACTTGAAATTTACAGACAGGCCAACGCCATTGAAGCAGTTCATTACCTTGTCGATGAAGAAATCCGATGGAGACCCATTTGAATTCAACTTCATTTTCATCATTTTAGTGTTGGGCCCCTCCCCAATTGGACTCGTTGCGAGCTGAGCTGAATTTGAAGAACCCCAAAAAGCTTCACTGTCGGATCTTTCATGGAGTGGCAATGGAGCTGTCTCATCCTCTGTTTGGTCTCGTTTCCATTTCTTTAGCCCATTGAAACCCCATTGTTTTTTTCCAGATTTGTTCATCCGTTCTTCATAATCTGGACCATAATTTCCACCGCCGCCATTGCCGCCCTGAAACAGAGCTTTAAAGGGTCGTCGTTTTGCCTTTTCTTCACTCATCTCCTTGTTTGATGAACTTTCCGACATCAGAATCGAATGGGTATCACTGATATTACACAGATTTTCAGATTCAAAAATACTTTTCTCTTTTCTGTTCCTCTCTGTTTTTTGTGATGACGCGAAACTAAAAACCGACGCAGCTCCTCTGATCTGTTTCATACCCAACATAACCTTTGATCTGTTCTTCGAATTTGAGTTCGATTTCAGTGAAGAATTTTCATCTCTCAAGTCAATAATCGACCATTCTTCTTCTAAAATCTCCTTCGAATTCTCTTTTGGGTCAGCTACAATCACATCCCTGGCCTCAATTTCAGCTCCTTGAACTGCTAATCTCTGAAGCAGAGGCCTCTTCGAAGAGTGATACTCATCTGTTGTTATGCATTTCGCATAAAGAA

Coding sequence (CDS)

ATGGGTTCGAGTTGTAGTCGTTTGGGGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAAATTCTGCTCTCTCTTCTGTGGTGCTTCATCTTCTCGCGCGATTCATCAGATGGAAGATTCTACAGCTCAATTTCTTGTCCATCCGACAGAACATGAACATTGTAATCACATCATTGATGAAGTTCAACTCCCCACAAATGGATCTATAAGAACGGGGCTTCCTAGCGCAAGCGCTTATTCCGAGACCTTGCACGAGAACAGGATTGCAGTCAGTGAGGAGCAATGTGGTGTAGATGAACCAAGAAATATTGATATCAATGATCATGGGAAGTGTTTGTCTCAAAACAAGGAATTAGTTCCACTTCAACAGATTAGTGCTGATTACAGTCACGATGAATCTCGTAGACATAGAGATCGATCTTCGGAACCAGTATCTGTAAATATTCTGGCTAACGAGGATGCAGTAAATGGTATTGATAGTTCAGTGGACAAGGGTGTATCTCCAGTCTGCACCAAGGTCATGTTTGCGGCAAGTAGCTCGACTACTCAAGAGGTTGGAGACTTATGTTCGAATGAGCTGACAGGTTACATTCAAGAGGATGAGGGAACAGGCAACCAGAACCCGGAGTCTGAATCTTCTCCTGATTCGGATCTTCCGTTAACTTTTCAATCCCTTGAAGACGAATCTTCACGAGAGGTACCCTCGAGTTTAGACACTTTTGTGTCTGATGATAGGGAGGCAGGAGATGTGGGTATGCCTCATGTCGATATGGTCGGTATTTCTTCCAACGTTTTATCTACAAGTAGCATTGATGCAAATTCTCTTATGATCAGAAGGAATAGCAGAAGACTGTTTTGGGATGCCTTTTCAAGACGTAGTTTTAGAAGACATAGTGAATCTCCGTTTCTTTTCCCTCCTAATAACATAAGTACTACAGGAGATTCAGACCGGTGGCTCCTCGATATAAGTGGTGATTTTATCGATGATGAAGTGCGTGGCGATTCAAGACATTTTCCCAGAAGAATTCACATCTTGAATGAACAACAAAGAGACTCAAGATCCCAGGTGCAGATATGGGAAAGACTCCGTAGTAGTCTCAGCGAAAACAGTCGGCAGAACTTATCTTGCCCGTCAGGCATTCACTCTAATGGTGCTTGCTCGTGTGACTCGTTCTCAAGGATAGAACACTCGAGTACCCGTGCAAGCATATCGCGGATAATCATGCTTGCTGAAGCATTATTTGAGGTGTTGGATGAAATTCACGGTCAGCCTGTTTCTCTTGCCCTCTCCATGGTTTCACTCCCTGCACCCGAATCAGTTGTCGACTCTTTTCCTCTGAAGAACCACGAAAAGACGACTAATGGAGGGGACGAAATTGAGCAATGCTACATTTGCCTGGCTGAATACGAAGAGGGCGATAAAATAAGAGTCCTTCCCTGCCGACACGAGTACCATATGTTGTGTGTCGATAAATGGTTGAAGGAGATTCACGGAGTATGCCCGCTTTGCCGAGGGGATGTTCGTGCGGGCTCAAACGATGAATGTTCTGTTTCAAACCCTGAAATTCCAACAATTTGA

Protein sequence

MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNHIIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNKELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFAASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSSLDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRRHSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQVQIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI

Homology

[Close]

BLAST of Cp4.1LG18g05200 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.7e-15
Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 460 GDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDE 519
           GDE + C ICL EYE+GDK+RVLPC H YH  CVD WL +    CP+C+  V  G  DE
Sbjct: 224 GDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDE 282

[Close]

BLAST of Cp4.1LG18g05200 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.5e-15
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 460 GDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDE 519
           GDE + C ICL EYE+GDK+R+LPC H YH  CVD WL +    CP+C+  V  G  DE
Sbjct: 224 GDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDE 282

[Close]

BLAST of Cp4.1LG18g05200 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.3e-14
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 460 GDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDE 519
           GD+ + C ICL EYE+GDK+RVLPC H YH  CVD WL +    CP+C+  V  G  DE
Sbjct: 224 GDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDE 282

[Close]

BLAST of Cp4.1LG18g05200 vs. ExPASy Swiss-Prot
Match: O54965 (E3 ubiquitin-protein ligase RNF13 OS=Mus musculus OX=10090 GN=Rnf13 PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 3.1e-13
Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 460 GDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDEC 519
           GDE + C ICL EYE+GDK+R+LPC H YH  CVD WL +    CP+C+  V     D  
Sbjct: 234 GDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSD 293

Query: 520 S 521
           S
Sbjct: 294 S 294

[Close]

BLAST of Cp4.1LG18g05200 vs. ExPASy Swiss-Prot
Match: Q66HG0 (E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus OX=10116 GN=Rnf13 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.1e-13
Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 460 GDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDEC 519
           GDE + C ICL EYE+GDK+R+LPC H YH  CVD WL +    CP+C+  V     D  
Sbjct: 234 GDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSD 293

Query: 520 S 521
           S
Sbjct: 294 S 294

[Close]

BLAST of Cp4.1LG18g05200 vs. NCBI nr
Match: XP_023515421.1 (uncharacterized protein LOC111779586 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1051 bits (2717), Expect = 0.0
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0


Query: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60
           MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH
Sbjct: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60

Query: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120
           IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK
Sbjct: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120

Query: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180
           ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA
Sbjct: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180

Query: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240
           ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS
Sbjct: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240

Query: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300
           LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR
Sbjct: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300

Query: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360
           HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV
Sbjct: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360

Query: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420
           QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV
Sbjct: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420

Query: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480
           LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR
Sbjct: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480

Query: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 529
           VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI
Sbjct: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 529

[Close]

BLAST of Cp4.1LG18g05200 vs. NCBI nr
Match: XP_023515422.1 (uncharacterized protein LOC111779586 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1042 bits (2695), Expect = 0.0
Identity = 527/529 (99.62%), Postives = 527/529 (99.62%), Query Frame = 0


Query: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60
           MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH
Sbjct: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60

Query: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120
           IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK
Sbjct: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120

Query: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180
           ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA
Sbjct: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180

Query: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240
           ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS
Sbjct: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240

Query: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300
           LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR
Sbjct: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300

Query: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360
           HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQ 
Sbjct: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQ- 360

Query: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420
            IWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV
Sbjct: 361 -IWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420

Query: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480
           LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR
Sbjct: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480

Query: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 529
           VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI
Sbjct: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 527

[Close]

BLAST of Cp4.1LG18g05200 vs. NCBI nr
Match: XP_022921926.1 (uncharacterized RING finger protein C4G3.12c-like isoform X1 [Cucurbita moschata] >KAG6589802.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1016 bits (2626), Expect = 0.0
Identity = 513/529 (96.98%), Postives = 518/529 (97.92%), Query Frame = 0


Query: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60
           MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEH+HCNH
Sbjct: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHQHCNH 60

Query: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120
           IIDEVQLPTNGSIRTGLPSASA+SE  HEN I VSEEQC VD+P NIDINDHGKCLSQNK
Sbjct: 61  IIDEVQLPTNGSIRTGLPSASAHSEASHENSIVVSEEQCAVDDP-NIDINDHGKCLSQNK 120

Query: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180
           ELVPLQQISADYS DESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA
Sbjct: 121 ELVPLQQISADYSRDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180

Query: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240
           ASSS TQEVGDLC NELTGY+QEDEGT NQNPESESSPDSDLPLTFQSLEDESSREVPSS
Sbjct: 181 ASSSNTQEVGDLCLNELTGYVQEDEGTANQNPESESSPDSDLPLTFQSLEDESSREVPSS 240

Query: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300
           LDTFVSDDRE GDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR
Sbjct: 241 LDTFVSDDREPGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300

Query: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360
           HSESPFLFPPNNISTTGDSDRWLLDISG+FIDDEVRGDSRHFPRRIHILNEQQRDSRSQV
Sbjct: 301 HSESPFLFPPNNISTTGDSDRWLLDISGNFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360

Query: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420
           QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV
Sbjct: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420

Query: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480
           LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR
Sbjct: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480

Query: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 529
           VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI
Sbjct: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 528

[Close]

BLAST of Cp4.1LG18g05200 vs. NCBI nr
Match: XP_022921927.1 (uncharacterized RING finger protein C4G3.12c-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1007 bits (2604), Expect = 0.0
Identity = 511/529 (96.60%), Postives = 516/529 (97.54%), Query Frame = 0


Query: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60
           MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEH+HCNH
Sbjct: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHQHCNH 60

Query: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120
           IIDEVQLPTNGSIRTGLPSASA+SE  HEN I VSEEQC VD+P NIDINDHGKCLSQNK
Sbjct: 61  IIDEVQLPTNGSIRTGLPSASAHSEASHENSIVVSEEQCAVDDP-NIDINDHGKCLSQNK 120

Query: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180
           ELVPLQQISADYS DESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA
Sbjct: 121 ELVPLQQISADYSRDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180

Query: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240
           ASSS TQEVGDLC NELTGY+QEDEGT NQNPESESSPDSDLPLTFQSLEDESSREVPSS
Sbjct: 181 ASSSNTQEVGDLCLNELTGYVQEDEGTANQNPESESSPDSDLPLTFQSLEDESSREVPSS 240

Query: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300
           LDTFVSDDRE GDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR
Sbjct: 241 LDTFVSDDREPGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300

Query: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360
           HSESPFLFPPNNISTTGDSDRWLLDISG+FIDDEVRGDSRHFPRRIHILNEQQRDSRSQ 
Sbjct: 301 HSESPFLFPPNNISTTGDSDRWLLDISGNFIDDEVRGDSRHFPRRIHILNEQQRDSRSQ- 360

Query: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420
            IWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV
Sbjct: 361 -IWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420

Query: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480
           LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR
Sbjct: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480

Query: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 529
           VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI
Sbjct: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 526

[Close]

BLAST of Cp4.1LG18g05200 vs. NCBI nr
Match: XP_022987678.1 (uncharacterized RING finger protein C4G3.12c-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1000 bits (2586), Expect = 0.0
Identity = 506/529 (95.65%), Postives = 511/529 (96.60%), Query Frame = 0


Query: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60
           MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEH+HC+H
Sbjct: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHQHCHH 60

Query: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120
           IIDEVQLPTNGSIR GLPSASAYSE  HEN I VSEEQC V++  NIDINDHGKCLSQNK
Sbjct: 61  IIDEVQLPTNGSIRIGLPSASAYSEASHENSIVVSEEQCAVNDS-NIDINDHGKCLSQNK 120

Query: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180
           EL PL QISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVM  
Sbjct: 121 ELAPLHQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMCV 180

Query: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240
           ASSSTTQEVGDLCSNELT Y+QEDEGT NQNPESESSPD DLPLTFQSLEDESSREVPSS
Sbjct: 181 ASSSTTQEVGDLCSNELTVYVQEDEGTANQNPESESSPDLDLPLTFQSLEDESSREVPSS 240

Query: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300
            DTFVSDDRE GDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR
Sbjct: 241 FDTFVSDDREPGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300

Query: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360
           HSESPFLFPPNNISTTGD DRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV
Sbjct: 301 HSESPFLFPPNNISTTGDPDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360

Query: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420
           QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV
Sbjct: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420

Query: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480
           LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR
Sbjct: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480

Query: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 529
           VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI
Sbjct: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 528

[Close]

BLAST of Cp4.1LG18g05200 vs. ExPASy TrEMBL
Match: A0A6J1E2Q3 (uncharacterized RING finger protein C4G3.12c-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430037 PE=4 SV=1)

HSP 1 Score: 1016 bits (2626), Expect = 0.0
Identity = 513/529 (96.98%), Postives = 518/529 (97.92%), Query Frame = 0


Query: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60
           MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEH+HCNH
Sbjct: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHQHCNH 60

Query: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120
           IIDEVQLPTNGSIRTGLPSASA+SE  HEN I VSEEQC VD+P NIDINDHGKCLSQNK
Sbjct: 61  IIDEVQLPTNGSIRTGLPSASAHSEASHENSIVVSEEQCAVDDP-NIDINDHGKCLSQNK 120

Query: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180
           ELVPLQQISADYS DESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA
Sbjct: 121 ELVPLQQISADYSRDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180

Query: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240
           ASSS TQEVGDLC NELTGY+QEDEGT NQNPESESSPDSDLPLTFQSLEDESSREVPSS
Sbjct: 181 ASSSNTQEVGDLCLNELTGYVQEDEGTANQNPESESSPDSDLPLTFQSLEDESSREVPSS 240

Query: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300
           LDTFVSDDRE GDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR
Sbjct: 241 LDTFVSDDREPGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300

Query: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360
           HSESPFLFPPNNISTTGDSDRWLLDISG+FIDDEVRGDSRHFPRRIHILNEQQRDSRSQV
Sbjct: 301 HSESPFLFPPNNISTTGDSDRWLLDISGNFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360

Query: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420
           QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV
Sbjct: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420

Query: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480
           LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR
Sbjct: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480

Query: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 529
           VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI
Sbjct: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 528

[Close]

BLAST of Cp4.1LG18g05200 vs. ExPASy TrEMBL
Match: A0A6J1E1R4 (uncharacterized RING finger protein C4G3.12c-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430037 PE=4 SV=1)

HSP 1 Score: 1007 bits (2604), Expect = 0.0
Identity = 511/529 (96.60%), Postives = 516/529 (97.54%), Query Frame = 0


Query: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60
           MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEH+HCNH
Sbjct: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHQHCNH 60

Query: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120
           IIDEVQLPTNGSIRTGLPSASA+SE  HEN I VSEEQC VD+P NIDINDHGKCLSQNK
Sbjct: 61  IIDEVQLPTNGSIRTGLPSASAHSEASHENSIVVSEEQCAVDDP-NIDINDHGKCLSQNK 120

Query: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180
           ELVPLQQISADYS DESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA
Sbjct: 121 ELVPLQQISADYSRDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180

Query: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240
           ASSS TQEVGDLC NELTGY+QEDEGT NQNPESESSPDSDLPLTFQSLEDESSREVPSS
Sbjct: 181 ASSSNTQEVGDLCLNELTGYVQEDEGTANQNPESESSPDSDLPLTFQSLEDESSREVPSS 240

Query: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300
           LDTFVSDDRE GDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR
Sbjct: 241 LDTFVSDDREPGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300

Query: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360
           HSESPFLFPPNNISTTGDSDRWLLDISG+FIDDEVRGDSRHFPRRIHILNEQQRDSRSQ 
Sbjct: 301 HSESPFLFPPNNISTTGDSDRWLLDISGNFIDDEVRGDSRHFPRRIHILNEQQRDSRSQ- 360

Query: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420
            IWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV
Sbjct: 361 -IWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420

Query: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480
           LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR
Sbjct: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480

Query: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 529
           VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI
Sbjct: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 526

[Close]

BLAST of Cp4.1LG18g05200 vs. ExPASy TrEMBL
Match: A0A6J1JK55 (uncharacterized RING finger protein C4G3.12c-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485162 PE=4 SV=1)

HSP 1 Score: 1000 bits (2586), Expect = 0.0
Identity = 506/529 (95.65%), Postives = 511/529 (96.60%), Query Frame = 0


Query: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60
           MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEH+HC+H
Sbjct: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHQHCHH 60

Query: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120
           IIDEVQLPTNGSIR GLPSASAYSE  HEN I VSEEQC V++  NIDINDHGKCLSQNK
Sbjct: 61  IIDEVQLPTNGSIRIGLPSASAYSEASHENSIVVSEEQCAVNDS-NIDINDHGKCLSQNK 120

Query: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180
           EL PL QISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVM  
Sbjct: 121 ELAPLHQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMCV 180

Query: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240
           ASSSTTQEVGDLCSNELT Y+QEDEGT NQNPESESSPD DLPLTFQSLEDESSREVPSS
Sbjct: 181 ASSSTTQEVGDLCSNELTVYVQEDEGTANQNPESESSPDLDLPLTFQSLEDESSREVPSS 240

Query: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300
            DTFVSDDRE GDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR
Sbjct: 241 FDTFVSDDREPGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300

Query: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360
           HSESPFLFPPNNISTTGD DRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV
Sbjct: 301 HSESPFLFPPNNISTTGDPDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360

Query: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420
           QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV
Sbjct: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420

Query: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480
           LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR
Sbjct: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480

Query: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 529
           VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI
Sbjct: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 528

[Close]

BLAST of Cp4.1LG18g05200 vs. ExPASy TrEMBL
Match: A0A6J1JJJ1 (uncharacterized RING finger protein C4G3.12c-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485162 PE=4 SV=1)

HSP 1 Score: 992 bits (2564), Expect = 0.0
Identity = 504/529 (95.27%), Postives = 509/529 (96.22%), Query Frame = 0


Query: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHEHCNH 60
           MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEH+HC+H
Sbjct: 1   MGSSCSRLGSRPSRSRDYRTNRSKFCSLFCGASSSRAIHQMEDSTAQFLVHPTEHQHCHH 60

Query: 61  IIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCGVDEPRNIDINDHGKCLSQNK 120
           IIDEVQLPTNGSIR GLPSASAYSE  HEN I VSEEQC V++  NIDINDHGKCLSQNK
Sbjct: 61  IIDEVQLPTNGSIRIGLPSASAYSEASHENSIVVSEEQCAVNDS-NIDINDHGKCLSQNK 120

Query: 121 ELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMFA 180
           EL PL QISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVM  
Sbjct: 121 ELAPLHQISADYSHDESRRHRDRSSEPVSVNILANEDAVNGIDSSVDKGVSPVCTKVMCV 180

Query: 181 ASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDSDLPLTFQSLEDESSREVPSS 240
           ASSSTTQEVGDLCSNELT Y+QEDEGT NQNPESESSPD DLPLTFQSLEDESSREVPSS
Sbjct: 181 ASSSTTQEVGDLCSNELTVYVQEDEGTANQNPESESSPDLDLPLTFQSLEDESSREVPSS 240

Query: 241 LDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300
            DTFVSDDRE GDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR
Sbjct: 241 FDTFVSDDREPGDVGMPHVDMVGISSNVLSTSSIDANSLMIRRNSRRLFWDAFSRRSFRR 300

Query: 301 HSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQV 360
           HSESPFLFPPNNISTTGD DRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQ 
Sbjct: 301 HSESPFLFPPNNISTTGDPDRWLLDISGDFIDDEVRGDSRHFPRRIHILNEQQRDSRSQ- 360

Query: 361 QIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420
            IWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV
Sbjct: 361 -IWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEHSSTRASISRIIMLAEALFEV 420

Query: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480
           LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR
Sbjct: 421 LDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIR 480

Query: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 529
           VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI
Sbjct: 481 VLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVSNPEIPTI 526

[Close]

BLAST of Cp4.1LG18g05200 vs. ExPASy TrEMBL
Match: A0A6J1E562 (uncharacterized RING finger protein C4G3.12c-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430037 PE=4 SV=1)

HSP 1 Score: 938 bits (2425), Expect = 0.0
Identity = 473/489 (96.73%), Postives = 478/489 (97.75%), Query Frame = 0


Query: 41  MEDSTAQFLVHPTEHEHCNHIIDEVQLPTNGSIRTGLPSASAYSETLHENRIAVSEEQCG 100
           MEDSTAQFLVHPTEH+HCNHIIDEVQLPTNGSIRTGLPSASA+SE  HEN I VSEEQC 
Sbjct: 1   MEDSTAQFLVHPTEHQHCNHIIDEVQLPTNGSIRTGLPSASAHSEASHENSIVVSEEQCA 60

Query: 101 VDEPRNIDINDHGKCLSQNKELVPLQQISADYSHDESRRHRDRSSEPVSVNILANEDAVN 160
           VD+P NIDINDHGKCLSQNKELVPLQQISADYS DESRRHRDRSSEPVSVNILANEDAVN
Sbjct: 61  VDDP-NIDINDHGKCLSQNKELVPLQQISADYSRDESRRHRDRSSEPVSVNILANEDAVN 120

Query: 161 GIDSSVDKGVSPVCTKVMFAASSSTTQEVGDLCSNELTGYIQEDEGTGNQNPESESSPDS 220
           GIDSSVDKGVSPVCTKVMFAASSS TQEVGDLC NELTGY+QEDEGT NQNPESESSPDS
Sbjct: 121 GIDSSVDKGVSPVCTKVMFAASSSNTQEVGDLCLNELTGYVQEDEGTANQNPESESSPDS 180

Query: 221 DLPLTFQSLEDESSREVPSSLDTFVSDDREAGDVGMPHVDMVGISSNVLSTSSIDANSLM 280
           DLPLTFQSLEDESSREVPSSLDTFVSDDRE GDVGMPHVDMVGISSNVLSTSSIDANSLM
Sbjct: 181 DLPLTFQSLEDESSREVPSSLDTFVSDDREPGDVGMPHVDMVGISSNVLSTSSIDANSLM 240

Query: 281 IRRNSRRLFWDAFSRRSFRRHSESPFLFPPNNISTTGDSDRWLLDISGDFIDDEVRGDSR 340
           IRRNSRRLFWDAFSRRSFRRHSESPFLFPPNNISTTGDSDRWLLDISG+FIDDEVRGDSR
Sbjct: 241 IRRNSRRLFWDAFSRRSFRRHSESPFLFPPNNISTTGDSDRWLLDISGNFIDDEVRGDSR 300

Query: 341 HFPRRIHILNEQQRDSRSQVQIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEH 400
           HFPRRIHILNEQQRDSRSQVQIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEH
Sbjct: 301 HFPRRIHILNEQQRDSRSQVQIWERLRSSLSENSRQNLSCPSGIHSNGACSCDSFSRIEH 360

Query: 401 SSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGG 460
           SSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGG
Sbjct: 361 SSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKTTNGG 420

Query: 461 DEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECS 520
           DEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECS
Sbjct: 421 DEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECS 480

Query: 521 VSNPEIPTI 529
           VSNPEIPTI
Sbjct: 481 VSNPEIPTI 488

[Close]

BLAST of Cp4.1LG18g05200 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 1.6e-36
Identity = 87/176 (49.43%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 351 EQQRDSRSQVQIWERLRSSLSENS-RQNLSCP-SGIHSNGACSC-------DSFSRIEHS 410
           E++R  RSQV+  +RL S     +   + SC  SG    G C+C        + +  + +
Sbjct: 362 ERRRRIRSQVRALQRLGSRFENVAVHHDRSCVLSGQDQAGRCTCRAVTNRGSTTATTDET 421

Query: 411 STRASISRIIMLAEALFEVLDEIHGQPVSLA------LSMVSLPAPESVVDSFPLKNHEK 470
           + RASISRI++LAEALFEVLDEIH Q V L+       S+ S+PAP  VVD  P+K + K
Sbjct: 422 NARASISRIVLLAEALFEVLDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLYTK 481

Query: 471 TTNGGDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDV 512
           + +  ++  QCYICL EYEE D IR LPC HE+H  CVDKWLKEIH VCPLCRGD+
Sbjct: 482 SQS--EDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDI 535

[Close]

BLAST of Cp4.1LG18g05200 vs. TAIR 10
Match: AT5G45290.2 (RING/U-box superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 2.3e-35
Identity = 87/177 (49.15%), Postives = 112/177 (63.28%), Query Frame = 0


Query: 351 EQQRDSRSQVQIWERLRSSLSENS-RQNLSCP-SGIHSNGACSC-------DSFSRIEHS 410
           E++R  RSQV+  +RL S     +   + SC  SG    G C+C        + +  + +
Sbjct: 362 ERRRRIRSQVRALQRLGSRFENVAVHHDRSCVLSGQDQAGRCTCRAVTNRGSTTATTDET 421

Query: 411 STRASISRIIMLAEALFEVLDEIHGQPVSLA------LSMVSLPAPESVVDSFPLKNHEK 470
           + RASISRI++LAEALFEVLDEIH Q V L+       S+ S+PAP  VVD  P+K + K
Sbjct: 422 NARASISRIVLLAEALFEVLDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLYTK 481

Query: 471 TTNGGDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHG-VCPLCRGDV 512
           + +  ++  QCYICL EYEE D IR LPC HE+H  CVDKWLKEIH  VCPLCRGD+
Sbjct: 482 SQS--EDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHSRVCPLCRGDI 536

[Close]

BLAST of Cp4.1LG18g05200 vs. TAIR 10
Match: AT4G09560.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.9e-13
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 466 CYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDE 519
           C ICL  YE+GDK+R+LPC H++H+ CVD WL +    CP+C+ D R+ S D+
Sbjct: 234 CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSISTDK 286

[Close]

BLAST of Cp4.1LG18g05200 vs. TAIR 10
Match: AT1G35625.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 9.4e-13
Identity = 25/76 (32.89%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 441 PESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEI 500
           P+ ++ S P + +      G     C IC+ +Y  G+ +R+LPC+H+YH +C+D WL   
Sbjct: 91  PKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDYRVGEILRILPCKHKYHAVCIDSWLGRC 150

Query: 501 HGVCPLCRGDVRAGSN 517
              CP+C+ + R G++
Sbjct: 151 RSFCPVCKQNPRTGND 166

[Close]

BLAST of Cp4.1LG18g05200 vs. TAIR 10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.6e-12
Identity = 25/76 (32.89%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 441 PESVVDSFPLKNHEKTTNGGDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEI 500
           P  ++ S P + +            C IC+ +Y  G+K+R+LPC+H+YH +C+D WL   
Sbjct: 208 PRDLLQSMPTEVYSGVLEESSTSVTCAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGRC 267

Query: 501 HGVCPLCRGDVRAGSN 517
              CP+C+ + R G++
Sbjct: 268 RSFCPVCKQNPRTGND 283

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g05200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91XF4	5.7e-15	55.93	E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1	[more]
Q5XIL0	7.5e-15	54.24	E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 ...	[more]
Q9H6Y7	1.3e-14	54.24	E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1	[more]
O54965	3.1e-13	50.82	E3 ubiquitin-protein ligase RNF13 OS=Mus musculus OX=10090 GN=Rnf13 PE=1 SV=2	[more]
Q66HG0	3.1e-13	50.82	E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus OX=10116 GN=Rnf13 PE=2 SV...	[more]

BLAST of Cp4.1LG18g05200 vs. NCBI nr


Match Name	Identity	Description
XP_023515421.1	100.00	uncharacterized protein LOC111779586 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023515422.1	99.62	uncharacterized protein LOC111779586 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022921926.1	96.98	uncharacterized RING finger protein C4G3.12c-like isoform X1 [Cucurbita moschata...	[more]
XP_022921927.1	96.60	uncharacterized RING finger protein C4G3.12c-like isoform X2 [Cucurbita moschata...	[more]
XP_022987678.1	95.65	uncharacterized RING finger protein C4G3.12c-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG18g05200 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1E2Q3	96.98	uncharacterized RING finger protein C4G3.12c-like isoform X1 OS=Cucurbita moscha...	[more]
A0A6J1E1R4	96.60	uncharacterized RING finger protein C4G3.12c-like isoform X2 OS=Cucurbita moscha...	[more]
A0A6J1JK55	95.65	uncharacterized RING finger protein C4G3.12c-like isoform X1 OS=Cucurbita maxima...	[more]
A0A6J1JJJ1	95.27	uncharacterized RING finger protein C4G3.12c-like isoform X2 OS=Cucurbita maxima...	[more]
A0A6J1E562	96.73	uncharacterized RING finger protein C4G3.12c-like isoform X3 OS=Cucurbita moscha...	[more]

BLAST of Cp4.1LG18g05200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45290.1	1.6e-36	49.43	RING/U-box superfamily protein	[more]
AT5G45290.2	2.3e-35	49.15	RING/U-box superfamily protein	[more]
AT4G09560.1	1.9e-13	50.94	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G35625.1	9.4e-13	32.89	RING/U-box superfamily protein	[more]
AT1G35630.1	1.6e-12	32.89	Protease-associated (PA) RING/U-box zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 466..507 e-value: 3.7E-6 score: 36.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 465..508 e-value: 1.6E-10 score: 41.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 466..508 score: 12.238477
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 432..514 e-value: 1.1E-19 score: 71.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..241
None	No IPR available	PANTHER	PTHR47168	RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED	coord: 1..527
None	No IPR available	PANTHER	PTHR47168:SF1	RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED	coord: 1..527
None	No IPR available	CDD	cd16486	mRING-H2-C3H2C2D_ZSWM2	coord: 465..508 e-value: 1.75164E-18 score: 76.8817
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 455..512

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g05200.1	Cp4.1LG18g05200.1	mRNA