Homology
BLAST of Cp4.1LG18g04810 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 6.7e-45
Identity = 94/177 (53.11%), Postives = 129/177 (72.88%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSP------SSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGL 60
M + +P V S + P SSDPPY +++HPSL L+ C+++++LR IHAQ+IK GL
Sbjct: 2 MLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGL 61
Query: 61 HNTQFALSKLIEFSAVS-RYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVF 120
HNT +ALSKLIEF +S + + YA+S+F +I+EPNL IWN+M RG ++S PV AL
Sbjct: 62 HNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKL 121
Query: 121 FVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINI 171
+V MI G+ PNSYTFPF+LKSCAK + +EG+QIH HVLKLG D+++HTSLI++
Sbjct: 122 YVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISM 178
BLAST of Cp4.1LG18g04810 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 113.6 bits (283), Expect = 2.2e-24
Identity = 56/144 (38.89%), Postives = 90/144 (62.50%), Query Frame = 0
Query: 27 HPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSAVSRYAD-ISYAVSLFNS 86
+ ++ + +C L+QIHA+++KTGL +A++K + F S +D + YA +F+
Sbjct: 15 YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74
Query: 87 IEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCAKLASAREG 146
+ P+ F+WN MIRG S S P +L+ + RM+ + N+YTFP LLK+C+ L++ E
Sbjct: 75 FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134
Query: 147 KQIHAHVLKLGFVSDVFIHTSLIN 170
QIHA + KLG+ +DV+ SLIN
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLIN 158
BLAST of Cp4.1LG18g04810 vs. ExPASy Swiss-Prot
Match:
Q9C6T2 (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 1.4e-23
Identity = 60/148 (40.54%), Postives = 95/148 (64.19%), Query Frame = 0
Query: 25 QDHPSLKLISKCRSIRTLRQIHAQIIKTGL-HNTQFALSKLIEFSAVSRYAD-ISYAVSL 84
++ L L+ +C +I +Q+HA+ IK L +++ F+ S ++ A S + + ++YA S+
Sbjct: 29 KEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88
Query: 85 FNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCAKLASA 144
F I++P F +N+MIRG +S AL F+ M+ G EP+++T+P LLK+C +L S
Sbjct: 89 FRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148
Query: 145 REGKQIHAHVLKLGFVSDVFIHTSLINI 171
REGKQIH V KLG +DVF+ SLIN+
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINM 176
BLAST of Cp4.1LG18g04810 vs. ExPASy Swiss-Prot
Match:
Q9MA95 (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E82 PE=3 SV=2)
HSP 1 Score: 110.5 bits (275), Expect = 1.9e-23
Identity = 56/146 (38.36%), Postives = 92/146 (63.01%), Query Frame = 0
Query: 28 PSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEF-SAVSRYADISYAVSLFNSI 87
P L + CRS+ L Q+H +IK+ + LS+LI+F + ++SYA S+F SI
Sbjct: 8 PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI 67
Query: 88 EEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCAKLASAREGK 147
+ P+++IWNSMIRG S S +P AL+F+ M+ G P+ +TFP++LK+C+ L + G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 148 QIHAHVLKLGFVSDVFIHTSLINIQM 173
+H V+K GF ++++ T L+++ M
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYM 153
BLAST of Cp4.1LG18g04810 vs. ExPASy Swiss-Prot
Match:
Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 110.5 bits (275), Expect = 1.9e-23
Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 0
Query: 14 SPSSDPPYRLLQDHPS--LKLISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSAVS 73
SP + P HPS I+ CR+IR L QIHA IK+G A ++++ F A S
Sbjct: 9 SPGGNSPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATS 68
Query: 74 --RYADISYAVSLFNSIEEPNLFIWNSMIRGLSIS---LSPVLALVFFVRMIHAGVEPNS 133
+ D+ YA +FN + + N F WN++IRG S S + + +F+ M VEPN
Sbjct: 69 DLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNR 128
Query: 134 YTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINIQML 174
+TFP +LK+CAK +EGKQIH LK GF D F+ ++L+ + ++
Sbjct: 129 FTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM 175
BLAST of Cp4.1LG18g04810 vs. NCBI nr
Match:
XP_022961045.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita moschata])
HSP 1 Score: 329 bits (843), Expect = 6.67e-106
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA
Sbjct: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
Query: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA
Sbjct: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
Query: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN
Sbjct: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
BLAST of Cp4.1LG18g04810 vs. NCBI nr
Match:
XP_023515625.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 329 bits (843), Expect = 6.67e-106
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA
Sbjct: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
Query: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA
Sbjct: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
Query: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN
Sbjct: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
BLAST of Cp4.1LG18g04810 vs. NCBI nr
Match:
KAG6589865.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 327 bits (839), Expect = 2.63e-105
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
MATSAPSLVLSPTSPSSDPPYRLLQ+HPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA
Sbjct: 1 MATSAPSLVLSPTSPSSDPPYRLLQEHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
Query: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA
Sbjct: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
Query: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN
Sbjct: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
BLAST of Cp4.1LG18g04810 vs. NCBI nr
Match:
XP_022987625.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita maxima])
HSP 1 Score: 326 bits (836), Expect = 7.38e-105
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA
Sbjct: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
Query: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFF RMIHA
Sbjct: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFARMIHA 120
Query: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
GVEPNSYTFPFLLKSCA+LASAREGKQIHAHVLKLGFVSDVFIHTSLIN
Sbjct: 121 GVEPNSYTFPFLLKSCARLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
BLAST of Cp4.1LG18g04810 vs. NCBI nr
Match:
KAE8653077.1 (hypothetical protein Csa_019866, partial [Cucumis sativus])
HSP 1 Score: 289 bits (740), Expect = 2.54e-97
Identity = 148/172 (86.05%), Postives = 160/172 (93.02%), Query Frame = 0
Query: 1 MATSAPSLVLSPTS---PSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNT 60
MA S+PSL+LSP+ PSSDPPYR+LQ+HPSLKL+SKC+SIRT +QIHA IIKTGLHNT
Sbjct: 1 MALSSPSLLLSPSFHVLPSSDPPYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNT 60
Query: 61 QFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRM 120
FALSKLIEFSAVSR DISYA+SLFNSIEEPNLFIWNSMIRGLS+SLSP LALVFFVRM
Sbjct: 61 LFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRM 120
Query: 121 IHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
I++GVEPNSYTFPFLLKSCAKLASA EGKQIHAHVLKLGFVSDVFIHTSLIN
Sbjct: 121 IYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLIN 172
BLAST of Cp4.1LG18g04810 vs. ExPASy TrEMBL
Match:
A0A6J1HAU9 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461670 PE=3 SV=1)
HSP 1 Score: 329 bits (843), Expect = 3.23e-106
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA
Sbjct: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
Query: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA
Sbjct: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
Query: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN
Sbjct: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
BLAST of Cp4.1LG18g04810 vs. ExPASy TrEMBL
Match:
A0A6J1JHE6 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111485125 PE=3 SV=1)
HSP 1 Score: 326 bits (836), Expect = 3.57e-105
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA
Sbjct: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
Query: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFF RMIHA
Sbjct: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFARMIHA 120
Query: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
GVEPNSYTFPFLLKSCA+LASAREGKQIHAHVLKLGFVSDVFIHTSLIN
Sbjct: 121 GVEPNSYTFPFLLKSCARLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
BLAST of Cp4.1LG18g04810 vs. ExPASy TrEMBL
Match:
A0A0A0LU28 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G306800 PE=3 SV=1)
HSP 1 Score: 289 bits (740), Expect = 7.04e-91
Identity = 148/172 (86.05%), Postives = 160/172 (93.02%), Query Frame = 0
Query: 1 MATSAPSLVLSPTS---PSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNT 60
MA S+PSL+LSP+ PSSDPPYR+LQ+HPSLKL+SKC+SIRT +QIHA IIKTGLHNT
Sbjct: 1 MALSSPSLLLSPSFHVLPSSDPPYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNT 60
Query: 61 QFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRM 120
FALSKLIEFSAVSR DISYA+SLFNSIEEPNLFIWNSMIRGLS+SLSP LALVFFVRM
Sbjct: 61 LFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRM 120
Query: 121 IHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
I++GVEPNSYTFPFLLKSCAKLASA EGKQIHAHVLKLGFVSDVFIHTSLIN
Sbjct: 121 IYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLIN 172
BLAST of Cp4.1LG18g04810 vs. ExPASy TrEMBL
Match:
A0A5A7TTJ1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00470 PE=3 SV=1)
HSP 1 Score: 288 bits (737), Expect = 1.96e-90
Identity = 146/172 (84.88%), Postives = 162/172 (94.19%), Query Frame = 0
Query: 1 MATSAPSLVLSPTS---PSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNT 60
MA S+PSL+LSP+ PSSDPPYR+LQ+HP+LKL+SKC++IRT +QIHA IIKTGLHNT
Sbjct: 1 MALSSPSLLLSPSFHVLPSSDPPYRVLQEHPALKLLSKCQNIRTFKQIHAHIIKTGLHNT 60
Query: 61 QFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRM 120
FALSKLIEFSAVSR DISYA+SLF+SIE+PNLFIWNSMIRGLS+SLSPVLALVFFVRM
Sbjct: 61 HFALSKLIEFSAVSRSGDISYAISLFSSIEDPNLFIWNSMIRGLSMSLSPVLALVFFVRM 120
Query: 121 IHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
I++GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN
Sbjct: 121 IYSGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 172
BLAST of Cp4.1LG18g04810 vs. ExPASy TrEMBL
Match:
A0A1S3CMX0 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502738 PE=3 SV=1)
HSP 1 Score: 288 bits (737), Expect = 2.17e-90
Identity = 146/172 (84.88%), Postives = 162/172 (94.19%), Query Frame = 0
Query: 1 MATSAPSLVLSPTS---PSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNT 60
MA S+PSL+LSP+ PSSDPPYR+LQ+HP+LKL+SKC++IRT +QIHA IIKTGLHNT
Sbjct: 1 MALSSPSLLLSPSFHVLPSSDPPYRVLQEHPALKLLSKCQNIRTFKQIHAHIIKTGLHNT 60
Query: 61 QFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRM 120
FALSKLIEFSAVSR DISYA+SLF+SIE+PNLFIWNSMIRGLS+SLSPVLALVFFVRM
Sbjct: 61 HFALSKLIEFSAVSRSGDISYAISLFSSIEDPNLFIWNSMIRGLSMSLSPVLALVFFVRM 120
Query: 121 IHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 169
I++GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN
Sbjct: 121 IYSGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLIN 172
BLAST of Cp4.1LG18g04810 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 181.8 bits (460), Expect = 4.7e-46
Identity = 94/177 (53.11%), Postives = 129/177 (72.88%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSP------SSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGL 60
M + +P V S + P SSDPPY +++HPSL L+ C+++++LR IHAQ+IK GL
Sbjct: 2 MLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGL 61
Query: 61 HNTQFALSKLIEFSAVS-RYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVF 120
HNT +ALSKLIEF +S + + YA+S+F +I+EPNL IWN+M RG ++S PV AL
Sbjct: 62 HNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKL 121
Query: 121 FVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINI 171
+V MI G+ PNSYTFPF+LKSCAK + +EG+QIH HVLKLG D+++HTSLI++
Sbjct: 122 YVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISM 178
BLAST of Cp4.1LG18g04810 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25
Identity = 56/144 (38.89%), Postives = 90/144 (62.50%), Query Frame = 0
Query: 27 HPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSAVSRYAD-ISYAVSLFNS 86
+ ++ + +C L+QIHA+++KTGL +A++K + F S +D + YA +F+
Sbjct: 15 YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74
Query: 87 IEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCAKLASAREG 146
+ P+ F+WN MIRG S S P +L+ + RM+ + N+YTFP LLK+C+ L++ E
Sbjct: 75 FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134
Query: 147 KQIHAHVLKLGFVSDVFIHTSLIN 170
QIHA + KLG+ +DV+ SLIN
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLIN 158
BLAST of Cp4.1LG18g04810 vs. TAIR 10
Match:
AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 110.9 bits (276), Expect = 1.0e-24
Identity = 60/148 (40.54%), Postives = 95/148 (64.19%), Query Frame = 0
Query: 25 QDHPSLKLISKCRSIRTLRQIHAQIIKTGL-HNTQFALSKLIEFSAVSRYAD-ISYAVSL 84
++ L L+ +C +I +Q+HA+ IK L +++ F+ S ++ A S + + ++YA S+
Sbjct: 29 KEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88
Query: 85 FNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCAKLASA 144
F I++P F +N+MIRG +S AL F+ M+ G EP+++T+P LLK+C +L S
Sbjct: 89 FRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148
Query: 145 REGKQIHAHVLKLGFVSDVFIHTSLINI 171
REGKQIH V KLG +DVF+ SLIN+
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINM 176
BLAST of Cp4.1LG18g04810 vs. TAIR 10
Match:
AT3G05240.1 (mitochondrial editing factor 19 )
HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 56/146 (38.36%), Postives = 92/146 (63.01%), Query Frame = 0
Query: 28 PSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEF-SAVSRYADISYAVSLFNSI 87
P L + CRS+ L Q+H +IK+ + LS+LI+F + ++SYA S+F SI
Sbjct: 8 PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI 67
Query: 88 EEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCAKLASAREGK 147
+ P+++IWNSMIRG S S +P AL+F+ M+ G P+ +TFP++LK+C+ L + G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 148 QIHAHVLKLGFVSDVFIHTSLINIQM 173
+H V+K GF ++++ T L+++ M
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYM 153
BLAST of Cp4.1LG18g04810 vs. TAIR 10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 0
Query: 14 SPSSDPPYRLLQDHPS--LKLISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSAVS 73
SP + P HPS I+ CR+IR L QIHA IK+G A ++++ F A S
Sbjct: 9 SPGGNSPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATS 68
Query: 74 --RYADISYAVSLFNSIEEPNLFIWNSMIRGLSIS---LSPVLALVFFVRMIHAGVEPNS 133
+ D+ YA +FN + + N F WN++IRG S S + + +F+ M VEPN
Sbjct: 69 DLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNR 128
Query: 134 YTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINIQML 174
+TFP +LK+CAK +EGKQIH LK GF D F+ ++L+ + ++
Sbjct: 129 FTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM 175
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LN01 | 6.7e-45 | 53.11 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9FJY7 | 2.2e-24 | 38.89 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9C6T2 | 1.4e-23 | 40.54 | Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... | [more] |
Q9MA95 | 1.9e-23 | 38.36 | Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis th... | [more] |
Q9FI80 | 1.9e-23 | 38.32 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
XP_022961045.1 | 6.67e-106 | 100.00 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita ... | [more] |
XP_023515625.1 | 6.67e-106 | 100.00 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita ... | [more] |
KAG6589865.1 | 2.63e-105 | 99.41 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022987625.1 | 7.38e-105 | 98.82 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita ... | [more] |
KAE8653077.1 | 2.54e-97 | 86.05 | hypothetical protein Csa_019866, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HAU9 | 3.23e-106 | 100.00 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbit... | [more] |
A0A6J1JHE6 | 3.57e-105 | 98.82 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbit... | [more] |
A0A0A0LU28 | 7.04e-91 | 86.05 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G3068... | [more] |
A0A5A7TTJ1 | 1.96e-90 | 84.88 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CMX0 | 2.17e-90 | 84.88 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT1G08070.1 | 4.7e-46 | 53.11 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G66520.1 | 1.6e-25 | 38.89 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G31920.1 | 1.0e-24 | 40.54 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G05240.1 | 1.3e-24 | 38.36 | mitochondrial editing factor 19 | [more] |
AT5G48910.1 | 1.3e-24 | 38.32 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |