Cp4.1LG18g04710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g04710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	26S proteasome regulatory subunit 8 homolog A-like
Location	Cp4.1LG18: 5597500 .. 5604934 (+)
RNA-Seq Expression	Cp4.1LG18g04710
Synteny	Cp4.1LG18g04710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATTAGGATGCTGAGGCCCGTGTCATCGTTCCTTTCTTTTCCTTTGGGCCTGCGTCGAGATGGGCTTCAACTTGCGATCGGCCCATTAGGATGCTGAGGCCCGTGTCATCGTTCCTTTCTTTCTTTTGGGCCTGCATCGATTGGGCTTCAACTTGCGACCGGCCCATTAGGATGCTGAGGCCCGTGTCCTCGTTCTTTTCTTTGCCGAAAGCGCAAGAAACCGGCAACATCCACCTCCCTTTCAGGGCATCGATTGATACAAGGAAATCTCATTTCAGTTTGCTCATCTTTGTTTAAATCTCGATCGTCTAGTGAAACAACTTCGAATTTCTAAGGGTTTTTCCAATGGCGACAATGGAGGTCGAGACCCAGCTAGCGACGTCGGCATCGGTCGGTACTTGCTCGGCGAAACAGGCGACGAACCAAGGCGAGGGTCTGAGGCAGTACTATCTTCAACATATTCACGAGCTCCAGCTCCAGGTTCGTCAAAAGACCCATAATCTGAATCGTCTTGAAGCTCAACGGAACGAGCTGAATTCGAAAGGTACCAATCAATTTTGAATTTTTTTTGGGTAGCTTTGGTTTCACTCAATTTCCTTGTGATGGGGTTTAAAGCGTAGGAGTTGGTCAGTCCACAAATGTTATACTTTTTGTTTGCTCCGCTGATGAATGGTTACATAATTAAGTAGCTATAAGAGTTAAGGAAGATACAAGAACAATTTGATTAGTTCTCTTTCATTATTATAATTTTTATGGCTGCCCTTCAACATTATTCTGTTGGATTTATGATTTATTTGAGGCTATTACATTTATATCTCATATTAATATTTACAGTGCGAATGCTCCGGGAAGAGCTGCAGCTGCTTCAAGAGCCAGGATCCTATGTTGGTGAAGTTGTTAAAGTCATGGGAAAGAACAAAGTTTTAGTTAAGGTTGGTGGCTTTGTCTTTTTTTCTTTATTTCAGAAAAAATAATAAATAAATTACAAATTCATTACCAATTTACCATTCCCCTTCCCTTGGTTACTCACTCTATGCTGGGATACATATTGATATTGTATAGAATTTTTGTCGGGAAACTTCTCTGGTGTAAAGTTCAATATTCTGTAATTAAAATGTGCTTAAGTTGGATCATTGTGAGGTCCCAAATCAGTTAGAGAGGGGAACGAATCATTCTTTATAAGGGTGTGGAAACCTCTTCTTAGAAGACGCGTTTTAAGATCGTGAGACTGACGGCGATACCTAACGGGCCAAAGCTGACAATATCTGTTAGCGGTGGGTTTGGGCTGTTACAAATGGTATGAGAGTCAAACACCGGACAGTGTGCCAGTGAGGACGTTGGGTACCTAGGGTCCCTAAGGGGGTGGATTGTGAGGTCCCACATCGGTTGGAAAGGGGAACAAAGCATTCTTATAAGGGTGTGGAAACCTCTCCGTAGAAGACACATTTTTAAATCGTGAGGCTGACGGCGATACCTAACTGGCCAAAGCGGACAATATCTGCTAGCGGTGGGTTTAGGCTATTACAGTCATAGAGTCCATATTATTAAAATAGTGAGACTTTACTCTTACAGATGCCGGGTAATAGAACTTGGCTGTTGTGCTCCAAATAATTAGCGTTATCGTCTTCTTATTTTTCAACAATCCATATTTGTATATCTTCAATCATGCAATCTTAGAAGTTTAGTCTCAAAACGTTCAATCTCAACTAGCTAATTGGATTTTTTTTTTTTTTTTCCAACTTCTCTTTGCTCACCTGCACAGGTTCACCCGGAAGGGAAATATGTTGTTGATATAGACAAAAGTATCGATATCACAAAAATCACACCTTCAACCAGAGTTGCTCTCCGTAACGACAGCTATGTTCTTCATTTAGTCTTGCCAAGCAAAGTAGATCCACTCGTTAATCTTATGAAAGTTGAAAAGGTTCCTGATTCTACTTATGATATGATTGGTGGTCTCGACCAGCAAATAAAAGAAATAAAAGAGGTTTGTACATTGCAAATATTTTTCTTATTTATGTCAACTACTTATTAGTCAATTATCTGTAAATTCTGAAATGGTAATTCCAATCTGAAGGTTATTGAACTCCCCATTAAGCATCCTGAACTATTTGAGAGTCTTGGAATAGCTCAACCAAAGGTAAACACTGCCTGCAGAGTTTCTTGATATGTTTCATGTTGGTCTTATTAAACATAGATATCTCACCATGCACTTCTAATAGGGCGTTCTGCTATATGGACCACCTGGTACGGGGAAGACGCTGTTGGCTAGAGCAGTGGCTCACCATACAGATTGTACTTTCATCAGGGTTTCTGGGTCTGAATTGGTCCAGAAATATATTGGAGAAGGTTCTAGAATGGTTAGAGAGCTTTTCGTCATGGCCAGGTTTGTTCTGACATTTTCTTCCGTGTTTCGATGTAAATTCGTTCACTCGGTGTTGTTGACCCTAACCTCCCTGCTTTATGTATGTATGGGATTTTTTCCTTGACTGCCACTAATGTCTAGAATCCAAATTAGGAGCTGATCTTTTGGTGCCAAAATTTTATTTAGTGGATATATCTTTAGATATAATCCTATACTTTTATTGTTCCAACTGCAACAAATTTTGGATTTTCCTCTGCAGGGAGCATGCACCTTCTATCATTTTCATGGATGAAATCGATAGCATTGGGTCTGCTCGAATGGAATCTGGGAGTGGTAATGGTGATAGCGAGGTGCAGCGTACCATGTTGGAACTTCTTAACCAGCTTGATGGATTTGAAGCATCAAATAAGATCAAGGTACAGTGCATAAACGCCATATGTAATGAAGCGTTTAAACCAGATATTGGTTTTCGTTTAAAGTTGGTTTCTATCCGCTCGGCTGTATTACAGGTCTTGATGGCCACCAATAGGATCGATATCCTGGATCAAGCTCTTCTAAGGCCAGGACGAATTGACAGGAAGATTGAATTCCCAAATCCTAACGAGGATGTAAGTACCACTACTTGTTTTGGTATATACTCTTGTTATTTAGAGCTTACTATAGCGACTCGATGAATTTTACTTCATTTAACGTTGTGACTCTTTTTGAGGCACTCTTGGCCCGAAAGGAATTGTAAGTTTGTTCGTAACGAAGAGATGAAAGCTACTCATCTTCTTGGTTTGTTTATGCTTTAATATACTCTTTCTGAGGCACTCTACATCCCTTTCGGATTGAAGAGTCGTGTCAATCACAGTCGCTCTTGCTATATCGATATACTGACATTTAGTTCATACGTAATGCAGTCCCGGTTTGATATCTTGAAAATACATTCACGGAAAATGAATCTGATGCGTGGGATTGATTTGAAGAAAATTGCAGAGAAAATGAATGGTGCATCTGGTGCAGAGCTCAAGGTATATTAATCTTTCGATGATAATATGGTTGGAAACAATCTTGAGTGCTCATCAATTACATTTTGGTGGCACATTTTGTGATCGAATACAGGCAGTCTGCACAGAAGCAGGGATGTTTGCGTTGAGGGAAAGACGGGTTCACGTGACTCAGGAAGATTTCGAGATGGCTGTTGCCAAGGTGATGAAGAAGGAATCCGAGAAGAACATGTCGTTGCGAAAGCTCTGGAAGTAGAATCGTCATACAAAGCAGCCAAGGCATGGCGAATATCAATATTACTTACCCTTTTGTTCTGAAATTCTTCACCTCACCTGAGCTGTTCTTGGAGATTTCTTGAACTTGGTATCTATCTACCTTGAATGATGTATTCTAGTCGTCAACTCTTTTATCTTCACGTTGATCTTGTAACTTAAAAGCCTCCCTTGCAACATTTCTTTTACCCCATCTCCAAATGTATTGACAAATTGAGATTGTAGCTGGTAAGAAATTATCAGTTGGCTGATAATCTGGAAGTTCGTTCTACATTAACTTGATATCAATCTGGAAGTTCTTGTAGGATTCTCAGTGATAATTTTTTTCTCAAAATCAATTGAATAGTTAATTTCTTATAAGAACCCGATTAAATGGTCTATTCTCGAATTATCGAAGTCTGCTAAATAGTAAAACTTGTTTGTGTGTATGAAGAACAACGAATGGGATGGAGACGAGGTATGGGGCAGGGATGTGTTGAAGGTAAGAAGAATTGCTAAAATACTTTGAATTTTGTATATGATGAGATTCATCGGTGGAAAACTGTCGGTAGTAACGTCTCACATCAAATCAAAATCATGAATCTTGTGGGTTCATCTGAAATTCATCCCTTGAGCCCAAAACAGACGAGCCCATTCCCTGACAGATTTACGGATGAGGCGAGGCCCCAAATGGAAAGACGAGGAAAATGGGGATATGAAAATCTTGTGGGTTCATATGAAGATCATTATTATGCTCATTATGAATCACCATCATCCGCGCGGGGAATCGTTAAAGGAGACATCCCATCTGCTTTGCACTTGCAGGCCCTTCTTCAACATTTTTATTGTACTTTGCATTAATATCGATCAGCATCTGCAGAAAAATCGAGTCCGAATCTTTCCTCGACTTCAGGTACTCAATACGGAGCTCTCTCTAATGTCTTTGTTTCTGTTTGTTCCAATTACTTTGACCCGTTTTCCCATGTTGAATCGAATGCTCTGAAGCCCCAACGTGTAGTTTCCTCAATGATTTGACTTCGAGATATCTAATTCTTATTCTGGGTATTGGTTTTCGATCTCTGTGAATTTGTGATTCAGTTTGTTCTAGGGCTGGGCAAGAAGATAACCAATGAAAGGGGAAGTACAATTGGAGTCATCAATTGGCCAAACCCCTAGTGACTCTGATCCTCTGCTTGAGAATCAGCCCGATTCATCCCATGAAACCTCTGATGAAATTAAGAACGAGGATACTGAAGCTGGTTCCATTCCTTGTTGTCGTATTTGCCTAGAGAGCGATGCCGAACCAGGTGAATTTCATCGTAGTTTCGTACAAGTTATTGCTCTGTTGAATTTTAGCTTCATTGAATCTTGGCGGGTGATTCCTTTGTTTAGTCCACTGGATTATAACTCAACTTCTATCATTGTTACAAGAATTGAAGATCCATTTCAAATTATTTTGAATCCTTGTTTTTGCTGGAAAGTGAATCTTGTTTGGTCTTTAATGGCTGTACAATCATGTAAGTTCTGTTTTCATAGCTGCTGGGGTAATACCTTCTTCCACTTGGCTCAAATGCAATTTTCCATTTTACAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGTTAAGGCAAATTTCTTTATTTGAGTTCTTCTATGCTGTTCCTGCTTTCGGCTATGAAGGATTTGATTGCTTCCTATTCTATTTTTCTTATGATCTTAATCAATCTGAAAGGATTCTTGTAATTCTGCAGGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCACCTGCAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTCCTCCTTGTATTTCTAGCTGTACAAACTGTGAGTCGACTTATACGTTCGTCATAGAATTATTATTGAATATGCCAACCTTTTATCAAGAACTTCATTACTATTCTCTTTTTATGAATAGCAAGGGTTGCGTTTGTAATTAGTATCAAGCTGCTATGTGGATATTCAGCTTTTAGTTTTCCATAGAACTCAAGGACACATTTGTACGACCTATAGAATAGAACGATATAGAACGTGTCAAGTGTACTCGTTATTCAACTTTTAATTGTTCAGGCTTGCAAGGAACTTTTGACTCTCGTATTTTTTCACAAGGTGCTCTCACTCTTAAGGATTTGTAATAATTTGTTTCATTTAAGCATGTCTCGTTCACTTGATGTCGATCAACCCAAAAGAAAAGTAAAGAACAAATGTTTGAACATAAACTTTTGTGGAAGATTTGGTGTCTAGTTAGATAATGGAGGATTCATCTTTTTTTTTTGCAGTTAATAGCGGCAATGGGTGGTTATGCATATATTATGGACAAAGATGGGGCATTCAGGAATTCTTTCAATGATGGATGGGACCGTATTCTGTCCAAACATCCTATTCCGTTTTATTATTGTATCGGTAAGCTACTTTTGATTTAAACTAGTCAGCTGTTTCTTTAAGAACTGGATCTGAGATGTGTCGGATTATCATATAGATAAATTCAGACTTCCCTGTGTATTGTTGTTCGTCCATGCTCAAGATAAAGTAGCAGAGATTCAGCATCCGTTTCAATTTGATAATGTTTCCTTCTTTTATATGAATCAATGTCAATGTGAGAAATGGCTGTTTTTGTGAACATTTGTGTTTTGTGTTTTGTGTTATTTTGTGAGGTTCAATGGCGAGAGAAATAATAGAATCTTCAGGACGTTTGAGTTCATCCGATGATGTTCTGGCTCTTGTTAGATTCTCTATATCGAGGTCCTTTTGTAATTATTCGTTAGGTCTCATTTTACTCGAATGGAACCCCTTCCTGTAGTTTGCTCCCTTTTTGTGGCCTTCTCCATTTGGTTTGTCCGTTCATTCTTCTGAATAGAAATTAAGTTTATCATAAAAAGAAAAAAGAAAAAATGTCATTGTTTGCCCATTTCTTTTGACAAATTTAACGGTTCGAGATCAAATACGCATAATCAATGACTTGTTTCATGGTTTTGATTTACTAATGTCTTTCTATGTGCTTATTTTTCATAACATCAGGGGTCCTGGCCTTCTTTGTTCTGCTCGGATTCTTCGGCCTCATACTACATTGTTCCTCCCTGAATAGTAATGATCCACGAGTTGCTGGCTGTCACAACTGTTGCTATGGATGGGGCATCTTGGATTGTTTCCCTGCGTCTATGGAGGCCTGCTTTGCACTTGTTATTGTCTTCGTTGTCATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCCACTATGGGTATTCAAAGAATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGTAAGGTTCCACCGTTTTTTGTTAGTGGATTTAAAACCTCCTGTTGCTGGTTTTTATACTTCACTTCCTTGTAGGAATACGTGGTGGAGGATCTTCATGGTTGTTATACTCCTCCGAAATTGGAACCCGAACACGAACAGCACTTGAAAATGCTACAGCTTCTGTAATGAATGGCAGATGAGGTTGTTCAGTTTCTGTCATTTTGTTTGTTATGTTCTTTTGTTTGAGATGATACAATGTGCATCTGCTTGACACCGTTGTTATGAATGAGCAATGTGGAAAATAGATTTTAACTCTTTTCTCACTGTCCCCTTCTCGCATTCTGAGCATCTGTTTCAGTTTTTAAGCTTACAATAGGTTCTGTACTTCGATTTCGTGTTCATAATTTGGTTAAAATCATT

mRNA sequence

CCCATTAGGATGCTGAGGCCCGTGTCATCGTTCCTTTCTTTTCCTTTGGGCCTGCGTCGAGATGGGCTTCAACTTGCGATCGGCCCATTAGGATGCTGAGGCCCGTGTCATCGTTCCTTTCTTTCTTTTGGGCCTGCATCGATTGGGCTTCAACTTGCGACCGGCCCATTAGGATGCTGAGGCCCGTGTCCTCGTTCTTTTCTTTGCCGAAAGCGCAAGAAACCGGCAACATCCACCTCCCTTTCAGGGCATCGATTGATACAAGGAAATCTCATTTCAGTTTGCTCATCTTTGTTTAAATCTCGATCGTCTAGTGAAACAACTTCGAATTTCTAAGGGTTTTTCCAATGGCGACAATGGAGGTCGAGACCCAGCTAGCGACGTCGGCATCGGTCGGTACTTGCTCGGCGAAACAGGCGACGAACCAAGGCGAGGGTCTGAGGCAGTACTATCTTCAACATATTCACGAGCTCCAGCTCCAGGTTCGTCAAAAGACCCATAATCTGAATCGTCTTGAAGCTCAACGGAACGAGCTGAATTCGAAAGTGCGAATGCTCCGGGAAGAGCTGCAGCTGCTTCAAGAGCCAGGATCCTATGTTGGTGAAGTTGTTAAAGTCATGGGAAAGAACAAAGTTTTAGTTAAGGTTCACCCGGAAGGGAAATATGTTGTTGATATAGACAAAAGTATCGATATCACAAAAATCACACCTTCAACCAGAGTTGCTCTCCGTAACGACAGCTATGTTCTTCATTTAGTCTTGCCAAGCAAAGTAGATCCACTCGTTAATCTTATGAAAGTTGAAAAGGTTCCTGATTCTACTTATGATATGATTGGTGGTCTCGACCAGCAAATAAAAGAAATAAAAGAGGTTATTGAACTCCCCATTAAGCATCCTGAACTATTTGAGAGTCTTGGAATAGCTCAACCAAAGGGCGTTCTGCTATATGGACCACCTGGTACGGGGAAGACGCTGTTGGCTAGAGCAGTGGCTCACCATACAGATTGTACTTTCATCAGGGTTTCTGGGTCTGAATTGGTCCAGAAATATATTGGAGAAGGTTCTAGAATGGTTAGAGAGCTTTTCGTCATGGCCAGGGAGCATGCACCTTCTATCATTTTCATGGATGAAATCGATAGCATTGGGTCTGCTCGAATGGAATCTGGGAGTGGTAATGGTGATAGCGAGGTGCAGCGTACCATGTTGGAACTTCTTAACCAGCTTGATGGATTTGAAGCATCAAATAAGATCAAGGTACAGTGCATAAACGCCATATGTAATGAAGCGTTTAAACCAGATATTGGTTTTCGTTTAAAGTTGGTTTCTATCCGCTCGGCTGTATTACAGGTCTTGATGGCCACCAATAGGATCGATATCCTGGATCAAGCTCTTCTAAGGCCAGGACGAATTGACAGGAAGATTGAATTCCCAAATCCTAACGAGGATTCCCGGTTTGATATCTTGAAAATACATTCACGGAAAATGAATCTGATGCGTGGGATTGATTTGAAGAAAATTGCAGAGAAAATGAATGGTGCATCTGGTGCAGAGCTCAAGAACAACGAATGGGATGGAGACGAGGTATGGGGCAGGGATGTGTTGAAGTCATCAATTGGCCAAACCCCTAGTGACTCTGATCCTCTGCTTGAGAATCAGCCCGATTCATCCCATGAAACCTCTGATGAAATTAAGAACGAGGATACTGAAGCTGGTTCCATTCCTTGTTGTCGTATTTGCCTAGAGAGCGATGCCGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCACCTGCAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTCCTCCTTGTATTTCTAGCTGTACAAACTTTAATAGCGGCAATGGGTGGTTATGCATATATTATGGACAAAGATGGGGCATTCAGGAATTCTTTCAATGATGGATGGGACCGTATTCTGTCCAAACATCCTATTCCGTTTTATTATTGTATCGGGGTCCTGGCCTTCTTTGTTCTGCTCGGATTCTTCGGCCTCATACTACATTGTTCCTCCCTGAATAGTAATGATCCACGAGTTGCTGGCTGTCACAACTGTTGCTATGGATGGGGCATCTTGGATTGTTTCCCTGCGTCTATGGAGGCCTGCTTTGCACTTGTTATTGTCTTCGTTGTCATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCCACTATGGGTATTCAAAGAATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATACGTGGTGGAGGATCTTCATGGTTGTTATACTCCTCCGAAATTGGAACCCGAACACGAACAGCACTTGAAAATGCTACAGCTTCTGTAATGAATGGCAGATGAGGTTGTTCAGTTTCTGTCATTTTGTTTGTTATGTTCTTTTGTTTGAGATGATACAATGTGCATCTGCTTGACACCGTTGTTATGAATGAGCAATGTGGAAAATAGATTTTAACTCTTTTCTCACTGTCCCCTTCTCGCATTCTGAGCATCTGTTTCAGTTTTTAAGCTTACAATAGGTTCTGTACTTCGATTTCGTGTTCATAATTTGGTTAAAATCATT

Coding sequence (CDS)

ATGGCGACAATGGAGGTCGAGACCCAGCTAGCGACGTCGGCATCGGTCGGTACTTGCTCGGCGAAACAGGCGACGAACCAAGGCGAGGGTCTGAGGCAGTACTATCTTCAACATATTCACGAGCTCCAGCTCCAGGTTCGTCAAAAGACCCATAATCTGAATCGTCTTGAAGCTCAACGGAACGAGCTGAATTCGAAAGTGCGAATGCTCCGGGAAGAGCTGCAGCTGCTTCAAGAGCCAGGATCCTATGTTGGTGAAGTTGTTAAAGTCATGGGAAAGAACAAAGTTTTAGTTAAGGTTCACCCGGAAGGGAAATATGTTGTTGATATAGACAAAAGTATCGATATCACAAAAATCACACCTTCAACCAGAGTTGCTCTCCGTAACGACAGCTATGTTCTTCATTTAGTCTTGCCAAGCAAAGTAGATCCACTCGTTAATCTTATGAAAGTTGAAAAGGTTCCTGATTCTACTTATGATATGATTGGTGGTCTCGACCAGCAAATAAAAGAAATAAAAGAGGTTATTGAACTCCCCATTAAGCATCCTGAACTATTTGAGAGTCTTGGAATAGCTCAACCAAAGGGCGTTCTGCTATATGGACCACCTGGTACGGGGAAGACGCTGTTGGCTAGAGCAGTGGCTCACCATACAGATTGTACTTTCATCAGGGTTTCTGGGTCTGAATTGGTCCAGAAATATATTGGAGAAGGTTCTAGAATGGTTAGAGAGCTTTTCGTCATGGCCAGGGAGCATGCACCTTCTATCATTTTCATGGATGAAATCGATAGCATTGGGTCTGCTCGAATGGAATCTGGGAGTGGTAATGGTGATAGCGAGGTGCAGCGTACCATGTTGGAACTTCTTAACCAGCTTGATGGATTTGAAGCATCAAATAAGATCAAGGTACAGTGCATAAACGCCATATGTAATGAAGCGTTTAAACCAGATATTGGTTTTCGTTTAAAGTTGGTTTCTATCCGCTCGGCTGTATTACAGGTCTTGATGGCCACCAATAGGATCGATATCCTGGATCAAGCTCTTCTAAGGCCAGGACGAATTGACAGGAAGATTGAATTCCCAAATCCTAACGAGGATTCCCGGTTTGATATCTTGAAAATACATTCACGGAAAATGAATCTGATGCGTGGGATTGATTTGAAGAAAATTGCAGAGAAAATGAATGGTGCATCTGGTGCAGAGCTCAAGAACAACGAATGGGATGGAGACGAGGTATGGGGCAGGGATGTGTTGAAGTCATCAATTGGCCAAACCCCTAGTGACTCTGATCCTCTGCTTGAGAATCAGCCCGATTCATCCCATGAAACCTCTGATGAAATTAAGAACGAGGATACTGAAGCTGGTTCCATTCCTTGTTGTCGTATTTGCCTAGAGAGCGATGCCGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCACCTGCAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTCCTCCTTGTATTTCTAGCTGTACAAACTTTAATAGCGGCAATGGGTGGTTATGCATATATTATGGACAAAGATGGGGCATTCAGGAATTCTTTCAATGATGGATGGGACCGTATTCTGTCCAAACATCCTATTCCGTTTTATTATTGTATCGGGGTCCTGGCCTTCTTTGTTCTGCTCGGATTCTTCGGCCTCATACTACATTGTTCCTCCCTGAATAGTAATGATCCACGAGTTGCTGGCTGTCACAACTGTTGCTATGGATGGGGCATCTTGGATTGTTTCCCTGCGTCTATGGAGGCCTGCTTTGCACTTGTTATTGTCTTCGTTGTCATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCCACTATGGGTATTCAAAGAATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATACGTGGTGGAGGATCTTCATGGTTGTTATACTCCTCCGAAATTGGAACCCGAACACGAACAGCACTTGAAAATGCTACAGCTTCTGTAA

Protein sequence

MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKNNEWDGDEVWGRDVLKSSIGQTPSDSDPLLENQPDSSHETSDEIKNEDTEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSEGFAFSHCTTCKAQFHLQVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGAFRNSFNDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMGIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKMLQLL

Homology

[Close]

BLAST of Cp4.1LG18g04710 vs. ExPASy Swiss-Prot
Match: Q9C5U3 (26S proteasome regulatory subunit 8 homolog A OS=Arabidopsis thaliana OX=3702 GN=RPT6A PE=1 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 2.7e-185
Identity = 348/404 (86.14%), Postives = 359/404 (88.86%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAK-QATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
           MA + V+++   +A   TC+ K  A  QGEGL+QYYLQHIHELQ Q+RQKT+NLNRLEAQ
Sbjct: 1   MAAVGVDSRRPETAMEETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQ 60

Query: 61  RNELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI 120
           RNELNS+VRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI
Sbjct: 61  RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI 120

Query: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
           TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
Sbjct: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180

Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
           IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS
Sbjct: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240

Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
           RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN
Sbjct: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300

Query: 301 KIKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIE 360
           KIK                               VLMATNRIDILDQALLRPGRIDRKIE
Sbjct: 301 KIK-------------------------------VLMATNRIDILDQALLRPGRIDRKIE 360

Query: 361 FPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 404
           FPNPNE+SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 FPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 373

[Close]

BLAST of Cp4.1LG18g04710 vs. ExPASy Swiss-Prot
Match: Q94BQ2 (26S proteasome regulatory subunit 8 homolog B OS=Arabidopsis thaliana OX=3702 GN=RPT6B PE=1 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 1.8e-181
Identity = 342/404 (84.65%), Postives = 354/404 (87.62%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAK-QATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
           MA + VE +   +A   TC+ K  A  QGEGL +YYLQH+ ELQ   R+K++NLNRLEAQ
Sbjct: 1   MAAVGVEARPPVTAMEETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQ 60

Query: 61  RNELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI 120
           RNELNS+VRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITK+
Sbjct: 61  RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKL 120

Query: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
           TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
Sbjct: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180

Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
           IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS
Sbjct: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240

Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
           RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN
Sbjct: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300

Query: 301 KIKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIE 360
           KIK                               VLMATNRIDILDQALLRPGRIDRKIE
Sbjct: 301 KIK-------------------------------VLMATNRIDILDQALLRPGRIDRKIE 360

Query: 361 FPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 404
           FPNPNE+SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 FPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 373

[Close]

BLAST of Cp4.1LG18g04710 vs. ExPASy Swiss-Prot
Match: P62194 (26S proteasome regulatory subunit 8 OS=Bos taurus OX=9913 GN=PSMC5 PE=2 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 4.2e-154
Identity = 288/376 (76.60%), Postives = 316/376 (84.04%), Query Frame = 0


Query: 28  GEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSKVRMLREELQLLQEPGSYVGEV 87
           G GLRQYYL  I ELQL V  K+ NL RL+AQRNELN+KVR+LREELQLLQE GSYVGEV
Sbjct: 17  GSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEV 76

Query: 88  VKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVN 147
           V+ M K KVLVKVHPEGK+VVD+DK+IDI  +TP+ RVALRNDSY LH +LP+KVDPLV+
Sbjct: 77  VRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVS 136

Query: 148 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 207
           LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGTGK
Sbjct: 137 LMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196

Query: 208 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 267
           TLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256

Query: 268 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVQCINAICNEAFKPDIGFRLKLVSI 327
           +R+E GSG GDSEVQRTMLELLNQLDGFEA+  IK                         
Sbjct: 257 SRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIK------------------------- 316

Query: 328 RSAVLQVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGIDL 387
                 V+MATNRIDILD ALLRPGRIDRKIEFP PNE++R DILKIHSRKMNL RGI+L
Sbjct: 317 ------VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL 360

Query: 388 KKIAEKMNGASGAELK 404
           +KIAE M GASGAE+K
Sbjct: 377 RKIAELMPGASGAEVK 360

[Close]

BLAST of Cp4.1LG18g04710 vs. ExPASy Swiss-Prot
Match: P62195 (26S proteasome regulatory subunit 8 OS=Homo sapiens OX=9606 GN=PSMC5 PE=1 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 4.2e-154
Identity = 288/376 (76.60%), Postives = 316/376 (84.04%), Query Frame = 0


Query: 28  GEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSKVRMLREELQLLQEPGSYVGEV 87
           G GLRQYYL  I ELQL V  K+ NL RL+AQRNELN+KVR+LREELQLLQE GSYVGEV
Sbjct: 17  GSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEV 76

Query: 88  VKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVN 147
           V+ M K KVLVKVHPEGK+VVD+DK+IDI  +TP+ RVALRNDSY LH +LP+KVDPLV+
Sbjct: 77  VRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVS 136

Query: 148 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 207
           LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGTGK
Sbjct: 137 LMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196

Query: 208 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 267
           TLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256

Query: 268 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVQCINAICNEAFKPDIGFRLKLVSI 327
           +R+E GSG GDSEVQRTMLELLNQLDGFEA+  IK                         
Sbjct: 257 SRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIK------------------------- 316

Query: 328 RSAVLQVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGIDL 387
                 V+MATNRIDILD ALLRPGRIDRKIEFP PNE++R DILKIHSRKMNL RGI+L
Sbjct: 317 ------VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL 360

Query: 388 KKIAEKMNGASGAELK 404
           +KIAE M GASGAE+K
Sbjct: 377 RKIAELMPGASGAEVK 360

[Close]

BLAST of Cp4.1LG18g04710 vs. ExPASy Swiss-Prot
Match: P62196 (26S proteasome regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 4.2e-154
Identity = 288/376 (76.60%), Postives = 316/376 (84.04%), Query Frame = 0


Query: 28  GEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSKVRMLREELQLLQEPGSYVGEV 87
           G GLRQYYL  I ELQL V  K+ NL RL+AQRNELN+KVR+LREELQLLQE GSYVGEV
Sbjct: 17  GSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEV 76

Query: 88  VKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVN 147
           V+ M K KVLVKVHPEGK+VVD+DK+IDI  +TP+ RVALRNDSY LH +LP+KVDPLV+
Sbjct: 77  VRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVS 136

Query: 148 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 207
           LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGTGK
Sbjct: 137 LMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196

Query: 208 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 267
           TLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS
Sbjct: 197 TLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256

Query: 268 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVQCINAICNEAFKPDIGFRLKLVSI 327
           +R+E GSG GDSEVQRTMLELLNQLDGFEA+  IK                         
Sbjct: 257 SRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIK------------------------- 316

Query: 328 RSAVLQVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGIDL 387
                 V+MATNRIDILD ALLRPGRIDRKIEFP PNE++R DILKIHSRKMNL RGI+L
Sbjct: 317 ------VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL 360

Query: 388 KKIAEKMNGASGAELK 404
           +KIAE M GASGAE+K
Sbjct: 377 RKIAELMPGASGAEVK 360

[Close]

BLAST of Cp4.1LG18g04710 vs. NCBI nr
Match: KAG6587905.1 (26S proteasome regulatory subunit 8-like A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1193 bits (3086), Expect = 0.0
Identity = 635/754 (84.22%), Postives = 650/754 (86.21%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60
           MATMEVETQ   S  V +CSAKQA  QGEGLRQYYLQHIHELQLQVRQK+HNLNRLEAQR
Sbjct: 1   MATMEVETQQVLSTMVDSCSAKQAAKQGEGLRQYYLQHIHELQLQVRQKSHNLNRLEAQR 60

Query: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120
           NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT
Sbjct: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120

Query: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180
           PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI
Sbjct: 121 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180

Query: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240
           KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR
Sbjct: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240

Query: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300
           MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK
Sbjct: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300

Query: 301 IKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360
           IKV                               LMATNRIDILDQALLRPGRIDRKIEF
Sbjct: 301 IKV-------------------------------LMATNRIDILDQALLRPGRIDRKIEF 360

Query: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK----------------N 420
           PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK                +
Sbjct: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVH 420

Query: 421 NEWDGDEVWGRDVLKSSIGQTPS---------------------DSDPLLENQPDSSHE- 480
              +  E+    V+K    +  S                      S  LL  + DSSH  
Sbjct: 421 VTQEDFEMAVAKVMKKESEKNMSLRKLWNPVRIFPRFQFVLGLKASVVLL--RSDSSHGG 480

Query: 481 TSDEIKN-EDTEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS--EG 540
           TSDEI++ ED EAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS  EG
Sbjct: 481 TSDEIRDDEDAEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSIKEG 540

Query: 541 FAFSHCTTCKAQFHLQVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMD 600
           FAFSHCTTCKAQFHL+VSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAA+GGYAYIMD
Sbjct: 541 FAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAIGGYAYIMD 600

Query: 601 KDGAFRNSFNDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCH 660
           KDGAFRNSF+DGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCH
Sbjct: 601 KDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCH 660

Query: 661 NCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMGIQRIWQRHYHILTKR 713
           NCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATM IQRIWQRHYHILTKR
Sbjct: 661 NCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKR 720

[Close]

BLAST of Cp4.1LG18g04710 vs. NCBI nr
Match: KZM97782.1 (hypothetical protein DCAR_014856 [Daucus carota subsp. sativus])

HSP 1 Score: 955 bits (2469), Expect = 0.0
Identity = 523/746 (70.11%), Postives = 563/746 (75.47%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60
           MA++E+E   +       CSAK+   +GEGL  YY  H H+L+L VR K+HNLNRLEAQR
Sbjct: 1   MASIEIEIHSSELGKEERCSAKKM-KRGEGLTHYYQHHFHDLELHVRNKSHNLNRLEAQR 60

Query: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120
           N+LNSKVRML+EE+QLLQEPGSYVGEVVKVMGK+KVLVKVHPEGKYVVDIDKSIDITKIT
Sbjct: 61  NDLNSKVRMLKEEVQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKIT 120

Query: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180
           PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI
Sbjct: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180

Query: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240
           KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR
Sbjct: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240

Query: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300
           MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK
Sbjct: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300

Query: 301 IKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360
           IKV                               LMATNRIDILDQALLRPGRIDRKIEF
Sbjct: 301 IKV-------------------------------LMATNRIDILDQALLRPGRIDRKIEF 360

Query: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKN---------------- 420
           PNPNEDSR+DILKIHSRKMNLMRGIDLKKIAEKM GASGAELK                 
Sbjct: 361 PNPNEDSRWDILKIHSRKMNLMRGIDLKKIAEKMGGASGAELKAVCTEAGMFALRERRVH 420

Query: 421 -NEWDGD-------EVWGRDVLKSSIGQTPSDSDPLLENQ-----PDSSHETSDEIKNED 480
             + D +       ++ G   L +   ++PS SDPLL +      P  S    D I +ED
Sbjct: 421 VTQEDFEMAVAKEHKMNGELQLDAFDDESPSYSDPLLGDYHVAAPPSWSQILKDGIHDED 480

Query: 481 TEAG--SIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTT 540
            +    S+PCCRICLE + + +DELISPCMCKGTQQFVHR CLDHWRS  EGFAFSHCTT
Sbjct: 481 DDDKDCSVPCCRICLECEGDNDDELISPCMCKGTQQFVHRMCLDHWRSVKEGFAFSHCTT 540

Query: 541 CKAQFHLQVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGAFRNS 600
           CKAQFHLQV  FED SWRK KFRLFVARDV LVF AVQTLIA   G AY++DKDGAFRNS
Sbjct: 541 CKAQFHLQVVKFEDGSWRKTKFRLFVARDVCLVFFAVQTLIAVNAGIAYLLDKDGAFRNS 600

Query: 601 FNDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGI 660
           F+D WD  LSKHPI FYY IGVL F VLLGFFGLILHCSS +S+DPR+AGC NC YGWGI
Sbjct: 601 FDDCWDHKLSKHPITFYYTIGVLGFLVLLGFFGLILHCSSFHSSDPRMAGCQNCFYGWGI 660

Query: 661 LDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMGIQRIWQRHYHILTKRELTKEYVV 713
           LD FPAS+EACFAL                                          EY+V
Sbjct: 661 LDSFPASLEACFAL------------------------------------------EYIV 672

[Close]

BLAST of Cp4.1LG18g04710 vs. NCBI nr
Match: KAG7023551.1 (26S protease regulatory subunit 8-like A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 773 bits (1995), Expect = 2.88e-275
Identity = 402/403 (99.75%), Postives = 402/403 (99.75%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60
           MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR
Sbjct: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60

Query: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120
           NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT
Sbjct: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120

Query: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180
           PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI
Sbjct: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180

Query: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240
           KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR
Sbjct: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240

Query: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300
           MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK
Sbjct: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300

Query: 301 IKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360
           IKVQCINAICNE FKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF
Sbjct: 301 IKVQCINAICNEVFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360

Query: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 403
           PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 403

[Close]

BLAST of Cp4.1LG18g04710 vs. NCBI nr
Match: XP_022961177.1 (26S proteasome regulatory subunit 8 homolog A-like [Cucurbita moschata] >XP_023516777.1 26S proteasome regulatory subunit 8 homolog A-like [Cucurbita pepo subsp. pepo] >KAG6589880.1 26S proteasome regulatory subunit 8-like A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 698 bits (1802), Expect = 1.86e-246
Identity = 372/403 (92.31%), Postives = 372/403 (92.31%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60
           MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR
Sbjct: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60

Query: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120
           NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT
Sbjct: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120

Query: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180
           PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI
Sbjct: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180

Query: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240
           KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR
Sbjct: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240

Query: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300
           MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK
Sbjct: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300

Query: 301 IKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360
           IKV                               LMATNRIDILDQALLRPGRIDRKIEF
Sbjct: 301 IKV-------------------------------LMATNRIDILDQALLRPGRIDRKIEF 360

Query: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 403
           PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 372

[Close]

BLAST of Cp4.1LG18g04710 vs. NCBI nr
Match: XP_022987736.1 (26S proteasome regulatory subunit 8 homolog A-like [Cucurbita maxima])

HSP 1 Score: 694 bits (1792), Expect = 6.12e-245
Identity = 369/403 (91.56%), Postives = 370/403 (91.81%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60
           MATMEVETQLATSASVGTCS KQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR
Sbjct: 1   MATMEVETQLATSASVGTCSVKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60

Query: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120
           NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDIT IT
Sbjct: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITNIT 120

Query: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180
           PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI
Sbjct: 121 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180

Query: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240
           KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR
Sbjct: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240

Query: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300
           MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK
Sbjct: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300

Query: 301 IKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360
           IKV                               LMATNRIDILDQALLRPGRIDRKIEF
Sbjct: 301 IKV-------------------------------LMATNRIDILDQALLRPGRIDRKIEF 360

Query: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 403
           PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 372

[Close]

BLAST of Cp4.1LG18g04710 vs. ExPASy TrEMBL
Match: A0A162A8W0 (RING-CH-type domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_014856 PE=3 SV=1)

HSP 1 Score: 955 bits (2469), Expect = 0.0
Identity = 523/746 (70.11%), Postives = 563/746 (75.47%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60
           MA++E+E   +       CSAK+   +GEGL  YY  H H+L+L VR K+HNLNRLEAQR
Sbjct: 1   MASIEIEIHSSELGKEERCSAKKM-KRGEGLTHYYQHHFHDLELHVRNKSHNLNRLEAQR 60

Query: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120
           N+LNSKVRML+EE+QLLQEPGSYVGEVVKVMGK+KVLVKVHPEGKYVVDIDKSIDITKIT
Sbjct: 61  NDLNSKVRMLKEEVQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKIT 120

Query: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180
           PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI
Sbjct: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180

Query: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240
           KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR
Sbjct: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240

Query: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300
           MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK
Sbjct: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300

Query: 301 IKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360
           IKV                               LMATNRIDILDQALLRPGRIDRKIEF
Sbjct: 301 IKV-------------------------------LMATNRIDILDQALLRPGRIDRKIEF 360

Query: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKN---------------- 420
           PNPNEDSR+DILKIHSRKMNLMRGIDLKKIAEKM GASGAELK                 
Sbjct: 361 PNPNEDSRWDILKIHSRKMNLMRGIDLKKIAEKMGGASGAELKAVCTEAGMFALRERRVH 420

Query: 421 -NEWDGD-------EVWGRDVLKSSIGQTPSDSDPLLENQ-----PDSSHETSDEIKNED 480
             + D +       ++ G   L +   ++PS SDPLL +      P  S    D I +ED
Sbjct: 421 VTQEDFEMAVAKEHKMNGELQLDAFDDESPSYSDPLLGDYHVAAPPSWSQILKDGIHDED 480

Query: 481 TEAG--SIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTT 540
            +    S+PCCRICLE + + +DELISPCMCKGTQQFVHR CLDHWRS  EGFAFSHCTT
Sbjct: 481 DDDKDCSVPCCRICLECEGDNDDELISPCMCKGTQQFVHRMCLDHWRSVKEGFAFSHCTT 540

Query: 541 CKAQFHLQVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGAFRNS 600
           CKAQFHLQV  FED SWRK KFRLFVARDV LVF AVQTLIA   G AY++DKDGAFRNS
Sbjct: 541 CKAQFHLQVVKFEDGSWRKTKFRLFVARDVCLVFFAVQTLIAVNAGIAYLLDKDGAFRNS 600

Query: 601 FNDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGI 660
           F+D WD  LSKHPI FYY IGVL F VLLGFFGLILHCSS +S+DPR+AGC NC YGWGI
Sbjct: 601 FDDCWDHKLSKHPITFYYTIGVLGFLVLLGFFGLILHCSSFHSSDPRMAGCQNCFYGWGI 660

Query: 661 LDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMGIQRIWQRHYHILTKRELTKEYVV 713
           LD FPAS+EACFAL                                          EY+V
Sbjct: 661 LDSFPASLEACFAL------------------------------------------EYIV 672

[Close]

BLAST of Cp4.1LG18g04710 vs. ExPASy TrEMBL
Match: A0A6J1H9H1 (26S proteasome regulatory subunit 8 homolog A-like OS=Cucurbita moschata OX=3662 GN=LOC111461766 PE=3 SV=1)

HSP 1 Score: 698 bits (1802), Expect = 8.99e-247
Identity = 372/403 (92.31%), Postives = 372/403 (92.31%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60
           MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR
Sbjct: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60

Query: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120
           NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT
Sbjct: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120

Query: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180
           PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI
Sbjct: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180

Query: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240
           KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR
Sbjct: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240

Query: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300
           MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK
Sbjct: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300

Query: 301 IKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360
           IKV                               LMATNRIDILDQALLRPGRIDRKIEF
Sbjct: 301 IKV-------------------------------LMATNRIDILDQALLRPGRIDRKIEF 360

Query: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 403
           PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 372

[Close]

BLAST of Cp4.1LG18g04710 vs. ExPASy TrEMBL
Match: A0A6J1JF62 (26S proteasome regulatory subunit 8 homolog A-like OS=Cucurbita maxima OX=3661 GN=LOC111485198 PE=3 SV=1)

HSP 1 Score: 694 bits (1792), Expect = 2.96e-245
Identity = 369/403 (91.56%), Postives = 370/403 (91.81%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60
           MATMEVETQLATSASVGTCS KQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR
Sbjct: 1   MATMEVETQLATSASVGTCSVKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60

Query: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120
           NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDIT IT
Sbjct: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITNIT 120

Query: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180
           PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI
Sbjct: 121 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180

Query: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240
           KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR
Sbjct: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240

Query: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300
           MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK
Sbjct: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300

Query: 301 IKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360
           IKV                               LMATNRIDILDQALLRPGRIDRKIEF
Sbjct: 301 IKV-------------------------------LMATNRIDILDQALLRPGRIDRKIEF 360

Query: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 403
           PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 372

[Close]

BLAST of Cp4.1LG18g04710 vs. ExPASy TrEMBL
Match: A0A6J1CT85 (26S proteasome regulatory subunit 8 homolog A OS=Momordica charantia OX=3673 GN=LOC111014533 PE=3 SV=1)

HSP 1 Score: 686 bits (1771), Expect = 4.56e-242
Identity = 366/403 (90.82%), Postives = 367/403 (91.07%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60
           MATMEVE Q AT ASV TCSAKQAT QGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR
Sbjct: 1   MATMEVENQQATLASVDTCSAKQATKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60

Query: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120
           NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT
Sbjct: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120

Query: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180
           PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI
Sbjct: 121 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180

Query: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240
           KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR
Sbjct: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240

Query: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300
           MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK
Sbjct: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300

Query: 301 IKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360
           IKV                               LMATNRIDILDQALLRPGRIDRKIEF
Sbjct: 301 IKV-------------------------------LMATNRIDILDQALLRPGRIDRKIEF 360

Query: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 403
           PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 372

[Close]

BLAST of Cp4.1LG18g04710 vs. ExPASy TrEMBL
Match: A0A5D3CVS3 (26S protease regulatory subunit 8-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00200 PE=3 SV=1)

HSP 1 Score: 684 bits (1766), Expect = 2.62e-241
Identity = 365/403 (90.57%), Postives = 366/403 (90.82%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60
           MATMEVETQ   SAS+  CSAKQAT QGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR
Sbjct: 1   MATMEVETQQVASASLDACSAKQATKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQR 60

Query: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120
           NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT
Sbjct: 61  NELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKIT 120

Query: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180
           PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI
Sbjct: 121 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 180

Query: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240
           KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR
Sbjct: 181 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 240

Query: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300
           MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK
Sbjct: 241 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 300

Query: 301 IKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEF 360
           IKV                               LMATNRIDILDQALLRPGRIDRKIEF
Sbjct: 301 IKV-------------------------------LMATNRIDILDQALLRPGRIDRKIEF 360

Query: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 403
           PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 PNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 372

[Close]

BLAST of Cp4.1LG18g04710 vs. TAIR 10
Match: AT5G19990.1 (regulatory particle triple-A ATPase 6A )

HSP 1 Score: 650.2 bits (1676), Expect = 1.9e-186
Identity = 348/404 (86.14%), Postives = 359/404 (88.86%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAK-QATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
           MA + V+++   +A   TC+ K  A  QGEGL+QYYLQHIHELQ Q+RQKT+NLNRLEAQ
Sbjct: 1   MAAVGVDSRRPETAMEETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQ 60

Query: 61  RNELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI 120
           RNELNS+VRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI
Sbjct: 61  RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI 120

Query: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
           TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
Sbjct: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180

Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
           IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS
Sbjct: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240

Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
           RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN
Sbjct: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300

Query: 301 KIKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIE 360
           KIK                               VLMATNRIDILDQALLRPGRIDRKIE
Sbjct: 301 KIK-------------------------------VLMATNRIDILDQALLRPGRIDRKIE 360

Query: 361 FPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 404
           FPNPNE+SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 FPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 373

[Close]

BLAST of Cp4.1LG18g04710 vs. TAIR 10
Match: AT5G20000.1 (AAA-type ATPase family protein )

HSP 1 Score: 637.5 bits (1643), Expect = 1.3e-182
Identity = 342/404 (84.65%), Postives = 354/404 (87.62%), Query Frame = 0


Query: 1   MATMEVETQLATSASVGTCSAK-QATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
           MA + VE +   +A   TC+ K  A  QGEGL +YYLQH+ ELQ   R+K++NLNRLEAQ
Sbjct: 1   MAAVGVEARPPVTAMEETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQ 60

Query: 61  RNELNSKVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI 120
           RNELNS+VRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITK+
Sbjct: 61  RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKL 120

Query: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
           TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
Sbjct: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180

Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
           IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS
Sbjct: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240

Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
           RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN
Sbjct: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300

Query: 301 KIKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIE 360
           KIK                               VLMATNRIDILDQALLRPGRIDRKIE
Sbjct: 301 KIK-------------------------------VLMATNRIDILDQALLRPGRIDRKIE 360

Query: 361 FPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 404
           FPNPNE+SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK
Sbjct: 361 FPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELK 373

[Close]

BLAST of Cp4.1LG18g04710 vs. TAIR 10
Match: AT1G11020.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 466.8 bits (1200), Expect = 3.0e-131
Identity = 239/318 (75.16%), Postives = 261/318 (82.08%), Query Frame = 0


Query: 414 GRDVLKSSIGQTPSDSDPLLENQPDSSHET----------SDEIKNE---DTEAGSIPCC 473
           G   L+    Q  SDS PLL +  +SS  +          SDEIK E   + +A S PCC
Sbjct: 4   GEVQLQPPDSQKLSDSAPLLGDHTNSSSASPSAASVVAGNSDEIKAEEDLENDASSAPCC 63

Query: 474 RICLESDAE-PEDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLQVS 533
           RICLE D+E   DELISPCMCKGTQQFVHRSCLDHWRS  EGFAFSHCTTCKAQFHL+V 
Sbjct: 64  RICLEDDSELLGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVE 123

Query: 534 LFED-NSW-RKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGAFRNSFNDGWDRI 593
            FED NSW RK KFRLFVARDVLLVFLAVQT+IA M G+AY+MDKDG FRNSFND WDRI
Sbjct: 124 PFEDNNSWRRKAKFRLFVARDVLLVFLAVQTVIAVMAGFAYMMDKDGEFRNSFNDDWDRI 183

Query: 594 LSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASM 653
           LSKHPIPFYYCIGV++FFVL GF G+ILHCS+LN NDPR+AGC NCCYGWG+LDCFPASM
Sbjct: 184 LSKHPIPFYYCIGVISFFVLTGFLGIILHCSALNGNDPRMAGCQNCCYGWGVLDCFPASM 243

Query: 654 EACFALVIVFVVIFVILGIAYGFLAATMGIQRIWQRHYHILTKRELTKEYVVEDLHGCYT 713
           EACFALV+VFVVIF ILG+AYGFLAATM IQRIWQRHYHILTKRELTKEY+VEDLHG YT
Sbjct: 244 EACFALVVVFVVIFAILGLAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGSYT 303

[Close]

BLAST of Cp4.1LG18g04710 vs. TAIR 10
Match: AT1G53750.1 (regulatory particle triple-A 1A )

HSP 1 Score: 285.8 bits (730), Expect = 9.5e-77
Identity = 163/347 (46.97%), Postives = 214/347 (61.67%), Query Frame = 0


Query: 62  ELNSKVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDIT 121
           +L S  +M++EE  L       V    K++  N    K ++ V    K+VV +   +  T
Sbjct: 72  DLVSDKQMMQEEQPL------QVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPT 131

Query: 122 KITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIE 181
            I    RV +  + Y + + LP K+DP V +M VE+ PD TY+ +GG  +QI++++EV+E
Sbjct: 132 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 191

Query: 182 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 241
           LP+ HPE F  LGI  PKGVL YGPPGTGKTLLARAVA+ TD  FIRV GSELVQKY+GE
Sbjct: 192 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 251

Query: 242 GSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 301
           G+RMVRELF MAR     I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A
Sbjct: 252 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDA 311

Query: 302 SNKIKVQCINAICNEAFKPDIGFRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRK 361
              IK                               VLMATNR D LD ALLRPGR+DRK
Sbjct: 312 RGNIK-------------------------------VLMATNRPDTLDPALLRPGRLDRK 371

Query: 362 IEFPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKN 405
           +EF  P+ +SR  I KIH+R MN  R I  + +A     ++GA++++
Sbjct: 372 VEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRS 380

[Close]

BLAST of Cp4.1LG18g04710 vs. TAIR 10
Match: AT5G43010.1 (regulatory particle triple-A ATPase 4A )

HSP 1 Score: 282.0 bits (720), Expect = 1.4e-75
Identity = 165/385 (42.86%), Postives = 228/385 (59.22%), Query Frame = 0


Query: 20  SAKQATNQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSKVRMLREELQLLQE 79
           S ++ T      R+  LQH  EL+ +VR    NL   + + N+         ++L+ LQ 
Sbjct: 7   SVRRRTAAVSEYRKKLLQH-KELESRVRTARENLRGAKKEFNK-------TEDDLKSLQS 66

Query: 80  PGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLP 139
            G  +GEV++ +   +++VK     +YVV     +D  K+T  TRV L   +  +   LP
Sbjct: 67  VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALP 126

Query: 140 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 199
            +VDP+V  M  E   + +Y  +GGL  QI+E++E IELP+ +PELF  +GI  PKGVLL
Sbjct: 127 REVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLL 186

Query: 200 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 259
           YGPPGTGKTLLARA+A + D  F++V  S ++ KYIGE +R++RE+F  AREH P IIFM
Sbjct: 187 YGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFM 246

Query: 260 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVQCINAICNEAFKPDIG 319
           DEID+IG  R   G+ + D E+QRT++ELLNQLDGF+   K+K                 
Sbjct: 247 DEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDNLGKVK----------------- 306

Query: 320 FRLKLVSIRSAVLQVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKM 379
                         ++MATNR D+LD ALLRPGR+DRKIE P PNE SR DILKIH+  +
Sbjct: 307 --------------MIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGI 351

Query: 380 NLMRGIDLKKIAEKMNGASGAELKN 405
                ID + I +   G +GA+L+N
Sbjct: 367 AKHGEIDYEAIVKLAEGFNGADLRN 351

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g04710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5U3	2.7e-185	86.14	26S proteasome regulatory subunit 8 homolog A OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q94BQ2	1.8e-181	84.65	26S proteasome regulatory subunit 8 homolog B OS=Arabidopsis thaliana OX=3702 GN...	[more]
P62194	4.2e-154	76.60	26S proteasome regulatory subunit 8 OS=Bos taurus OX=9913 GN=PSMC5 PE=2 SV=1	[more]
P62195	4.2e-154	76.60	26S proteasome regulatory subunit 8 OS=Homo sapiens OX=9606 GN=PSMC5 PE=1 SV=1	[more]
P62196	4.2e-154	76.60	26S proteasome regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmc5 PE=1 SV=1	[more]

BLAST of Cp4.1LG18g04710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587905.1	0.0	84.22	26S proteasome regulatory subunit 8-like A, partial [Cucurbita argyrosperma subs...	[more]
KZM97782.1	0.0	70.11	hypothetical protein DCAR_014856 [Daucus carota subsp. sativus]	[more]
KAG7023551.1	2.88e-275	99.75	26S protease regulatory subunit 8-like A [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022961177.1	1.86e-246	92.31	26S proteasome regulatory subunit 8 homolog A-like [Cucurbita moschata] >XP_0235...	[more]
XP_022987736.1	6.12e-245	91.56	26S proteasome regulatory subunit 8 homolog A-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG18g04710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A162A8W0	0.0	70.11	RING-CH-type domain-containing protein OS=Daucus carota subsp. sativus OX=79200 ...	[more]
A0A6J1H9H1	8.99e-247	92.31	26S proteasome regulatory subunit 8 homolog A-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JF62	2.96e-245	91.56	26S proteasome regulatory subunit 8 homolog A-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1CT85	4.56e-242	90.82	26S proteasome regulatory subunit 8 homolog A OS=Momordica charantia OX=3673 GN=...	[more]
A0A5D3CVS3	2.62e-241	90.57	26S protease regulatory subunit 8-like protein A OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of Cp4.1LG18g04710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19990.1	1.9e-186	86.14	regulatory particle triple-A ATPase 6A	[more]
AT5G20000.1	1.3e-182	84.65	AAA-type ATPase family protein	[more]
AT1G11020.1	3.0e-131	75.16	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G53750.1	9.5e-77	46.97	regulatory particle triple-A 1A	[more]
AT5G43010.1	1.4e-75	42.86	regulatory particle triple-A ATPase 4A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 39..73
None	No IPR available	GENE3D	1.10.8.60		coord: 363..405 e-value: 1.3E-11 score: 46.3
None	No IPR available	GENE3D	2.40.50.140		coord: 45..149 e-value: 1.6E-34 score: 120.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 420..451
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 420..438
None	No IPR available	PANTHER	PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	coord: 20..303
None	No IPR available	PANTHER	PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	coord: 331..403
None	No IPR available	CDD	cd14688	bZIP_YAP	coord: 37..77 e-value: 0.00412685 score: 34.2326
None	No IPR available	CDD	cd00009	AAA	coord: 163..361 e-value: 2.83741E-23 score: 94.5203
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 460..509 e-value: 3.23866E-21 score: 85.4568
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 458..513
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 459..509 e-value: 8.9E-16 score: 68.4
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 460..508 e-value: 3.3E-12 score: 46.3
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 452..515 score: 21.351782
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 193..364 e-value: 3.4E-22 score: 89.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 150..362 e-value: 2.1E-66 score: 225.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 155..404
IPR032501	Proteasomal ATPase OB C-terminal domain	PFAM	PF16450	Prot_ATP_ID_OB	coord: 84..139 e-value: 7.2E-9 score: 35.5
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 443..522 e-value: 2.7E-17 score: 64.1
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 197..361 e-value: 1.9E-39 score: 135.1
IPR035261	26S proteasome regulatory subunit 8	PANTHER	PTHR23073:SF102	BNAA02G04630D PROTEIN	coord: 331..403
IPR035261	26S proteasome regulatory subunit 8	PANTHER	PTHR23073:SF102	BNAA02G04630D PROTEIN	coord: 20..303
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 332..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g04710.1	Cp4.1LG18g04710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0036402	proteasome-activating activity
molecular_function	GO:0008270	zinc ion binding