Cp4.1LG18g04690 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g04690
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger Ran-binding domain-containing protein 2-like
Location	Cp4.1LG18: 5671102 .. 5673033 (+)
RNA-Seq Expression	Cp4.1LG18g04690
Synteny	Cp4.1LG18g04690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGCCAACTATATAAACCCCCCGCTCCCCCAGCTAACAAATTCAACAAACTCACTTCTAACAATTTTGAATTCTCTTCCACCAATTCAATTCACCTATTACCCAACAGAAACATTCTTTATTACATCCATCTTTTCTTCATCAAGGTGAGCTTCCTACTTCAGTAGTCAAATTCCTTTCTTTCTTTCTACCTTTTTTTNTGTTATTAGGGGAGAAAAAAGCTCTTGGGATTCAACCTCCCCCCTCCCCTCCCCCACCCCCCACAAAAGAAATATATGTGTGTTTACATTAGCCATCGACAAGGCATTTGGGGAAAAGGGTACTCAAATTTTGAAGTCTTAAGTTTCTTCTCTTTTTTTTTTTTTGGCACTCCAATTGCATTCATAGAGCTTGAACATTGTTGAAGATTATGACAGAGTTTTTAGACCCTTTGTGCAGATTTTTATTTGATTCTCTCACAACTTATGGATAATGGTATTTTGATATATAGAAGGGAATGAGCTGGTCAGCAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAATTTCAAGAAAAGAGAAGCATGCCATCGTTGCAGTTACCCCAAGTATGGAGGCCCAGACCCTTCAACTTACAGCTACAACAAGACGGAGGTGTTGGCCGGAGACTGGTACTGCACCGCCGTCAACTGCGGAGCTCACAATTACGCCAGCCGCCCGAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGGTTTGCCCTAGGTACACACACAACAATAAACTTTACAATAAAAGTTTATCCAAATAGTAAAGCCATTCAAATGGAAATATAATTCACACCTGCATTACTTTCAGCGACAAAATTTCAAATTCCTTACTCAAAAGATCACGCTGAAAATGAACAATAAAATTAGTTGATGTTGTTTAAACTCGCACCAGTATTCAATGTGTTTAATTAACATGTAATGTTGAACTGAAAGAAAAAAACATATAATGTTGTGTTGTACAGAATTGGATGCGGAATACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGGTTTCGGTCAGTTTATATCAATGAAGAACATAATTTGCACCTTTTTGTTATCTACTGCCCCTCAAAAAGTGTTTAATTTACCGTGTGTCACTTGGGTGTGATTCAATTTTGGGTGCTCTATCTTTTAGGTGGTGCAGTTTAAAGCGGGAAGGAATTTTGGAAGGCTCTCCTTATGCGATTATATCGTCTTCTTGGCATCCGATCCCTATCCAAATGCTGCCTTTTGTTTTCCTTTTTCTTTTTGTAATGACTAACAACAATAATGTTAAGCCCTTAGAATGCTCCTCAATATAGATATCATGGGTGGAGGCCCATTTTCCCCTCTTTAGCATTGCAATATAGCTTGCTACTCTCTCTCTCTATCTATCTATCTAATGGATGCGCAAAACAAGAACAAACATATCCAAATACTGTTTGGAATGTCAATGGTTGCTTTAAACACAGAATCAAATTGAAATGGAAACTATTATGTCAGCATATAGAAGCTTTGAGATTGAACCAGGGGGAAGGTTGAAAGGGTGGGGTATTGATTAAGATTCAGAATCTGTGTGAATAGCAAGCTCCTAATAAGATAGACTCAACTTTCAGCTCAATAATTTATGGTTCTTCAACCATCAAATCTCAAAGAAATAAATTCTTATGTATAAAAATAGATAAGAACCAGATGCCCCACTTCAACGGACATTAATGAAAACGCCCTTCTAATAACATTATTAGGCTCAAATTGCGAGTCAAACCCAACTTTCATCAGTGGCTGTAAAGAAGATTTGGTGTCCCCTAGAAAA

mRNA sequence

GTTGGCCAACTATATAAACCCCCCGCTCCCCCAGCTAACAAATTCAACAAACTCACTTCTAACAATTTTGAATTCTCTTCCACCAATTCAATTCACCTATTACCCAACAGAAACATTCTTTATTACATCCATCTTTTCTTCATCAAGAAGGGAATGAGCTGGTCAGCAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAATTTCAAGAAAAGAGAAGCATGCCATCGTTGCAGTTACCCCAAGTATGGAGGCCCAGACCCTTCAACTTACAGCTACAACAAGACGGAGGTGTTGGCCGGAGACTGGTACTGCACCGCCGTCAACTGCGGAGCTCACAATTACGCCAGCCGCCCGAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGGTTTGCCCTAGAATTGGATGCGGAATACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGGTTTCGGTCAGTTTATATCAATGAAGAACATAATTTGCACCTTTTTGTTATCTACTGCCCCTCAAAAAGTGTTTAATTTACCGTGGTGCAGTTTAAAGCGGGAAGGAATTTTGGAAGGCTCTCCTTATGCGATTATATCGTCTTCTTGGCATCCGATCCCTATCCAAATGCTGCCTTTTGTTTTCCTTTTTCTTTTTGTAATGACTAACAACAATAATGTTAAGCCCTTAGAATGCTCCTCAATATAGATATCATGGGTGGAGGCCCATTTTCCCCTCTTTAGCATTGCAATATAGCTTGCTACTCTCTCTCTCTATCTATCTATCTAATGGATGCGCAAAACAAGAACAAACATATCCAAATACTGTTTGGAATGTCAATGGTTGCTTTAAACACAGAATCAAATTGAAATGGAAACTATTATGTCAGCATATAGAAGCTTTGAGATTGAACCAGGGGGAAGGTTGAAAGGGTGGGGTATTGATTAAGATTCAGAATCTGTGTGAATAGCAAGCTCCTAATAAGATAGACTCAACTTTCAGCTCAATAATTTATGGTTCTTCAACCATCAAATCTCAAAGAAATAAATTCTTATGTATAAAAATAGATAAGAACCAGATGCCCCACTTCAACGGACATTAATGAAAACGCCCTTCTAATAACATTATTAGGCTCAAATTGCGAGTCAAACCCAACTTTCATCAGTGGCTGTAAAGAAGATTTGGTGTCCCCTAGAAAA

Coding sequence (CDS)

GTTGGCCAACTATATAAACCCCCCGCTCCCCCAGCTAACAAATTCAACAAACTCACTTCTAACAATTTTGAATTCTCTTCCACCAATTCAATTCACCTATTACCCAACAGAAACATTCTTTATTACATCCATCTTTTCTTCATCAAGAAGGGAATGAGCTGGTCAGCAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAATTTCAAGAAAAGAGAAGCATGCCATCGTTGCAGTTACCCCAAGTATGGAGGCCCAGACCCTTCAACTTACAGCTACAACAAGACGGAGGTGTTGGCCGGAGACTGGTACTGCACCGCCGTCAACTGCGGAGCTCACAATTACGCCAGCCGCCCGAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGGTTTGCCCTAGAATTGGATGCGGAATACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGGTTTCGGTCAGTTTATATCAATGAAGAACATAATTTGCACCTTTTTGTTATCTACTGCCCCTCAAAAAGTGTTTAATTTACCGTGGTGCAGTTTAAAGCGGGAAGGAATTTTGGAAGGCTCTCCTTATGCGATTATATCGTCTTCTTGGCATCCGATCCCTATCCAAATGCTGCCTTTTGTTTTCCTTTTTCTTTTTGTAATGACTAACAACAATAATGTTAAGCCCTTAGAATGCTCCTCAATATAG

Protein sequence

VGQLYKPPAPPANKFNKLTSNNFEFSSTNSIHLLPNRNILYYIHLFFIKKGMSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHNYASRMECFKCKTPRGFGQFISMKNIICTFLLSTAPQKVFNLPWCSLKREGILEGSPYAIISSSWHPIPIQMLPFVFLFLFVMTNNNNVKPLECSSI

Homology

[Close]

BLAST of Cp4.1LG18g04690 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-07
Identity = 34/130 (26.15%), Postives = 52/130 (40.00%), Query Frame = 0


Query: 57  GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYN-KTEVLAGDWYCTAVNCGAHNY 116
           GDW C +C   NF++R +C RCS+P       +T S     +   G+ Y    +    NY
Sbjct: 345 GDWNCPMCGFSNFQRRTSCFRCSFPGPTHVSAATGSNTFSPDFPYGNSYGNGSSHFIANY 404

Query: 117 ASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHNYASR 176
               +       +S      G   +              +++GDW C   GCG HN+A  
Sbjct: 405 GGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFGGNVPFRAGDWKCGSEGCGYHNFAKN 464

Query: 177 MECFKCKTPR 186
           + C +C   R
Sbjct: 465 VCCLRCGASR 474

[Close]

BLAST of Cp4.1LG18g04690 vs. ExPASy Swiss-Prot
Match: Q5ZLX5 (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 34/89 (38.20%), Postives = 42/89 (47.19%), Query Frame = 0


Query: 101 GDWYCTAVNCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WK 160
           GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 161 SGDWVCPRIGCGIHNYASRMECFKCKTPR 186
           + DW C    CG  N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CGNVNWARRSECNMCNTPK 92

[Close]

BLAST of Cp4.1LG18g04690 vs. ExPASy Swiss-Prot
Match: O95218 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 6.0e-05
Identity = 33/89 (37.08%), Postives = 41/89 (46.07%), Query Frame = 0


Query: 101 GDWYCTAVNCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WK 160
           GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 161 SGDWVCPRIGCGIHNYASRMECFKCKTPR 186
           + DW C    C   N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Cp4.1LG18g04690 vs. ExPASy Swiss-Prot
Match: Q9R020 (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 6.0e-05
Identity = 33/89 (37.08%), Postives = 41/89 (46.07%), Query Frame = 0


Query: 101 GDWYCTAVNCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WK 160
           GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 161 SGDWVCPRIGCGIHNYASRMECFKCKTPR 186
           + DW C    C   N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Cp4.1LG18g04690 vs. ExPASy Swiss-Prot
Match: Q19QU3 (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.0e-05
Identity = 33/89 (37.08%), Postives = 41/89 (46.07%), Query Frame = 0


Query: 101 GDWYCTAVNCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WK 160
           GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + 
Sbjct: 11  GDWICPDKKCGNVNFARRTSCNRCGREKTT-----EAKMMKAGGTEIGKTLAEKSRGLFS 70

Query: 161 SGDWVCPRIGCGIHNYASRMECFKCKTPR 186
           + DW C    C   N+A R EC  C TP+
Sbjct: 71  ANDWQCKT--CSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Cp4.1LG18g04690 vs. NCBI nr
Match: XP_008465021.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo])

HSP 1 Score: 354 bits (908), Expect = 4.93e-121
Identity = 158/190 (83.16%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   VGQLYKPPAPPANKFNKLTS-NNFEFSSTNSIHLLPNRNILYYIH-LFFIKKGMSWSAGD 60
           +GQLYKP  PP+NKFNKL+    F+F  T      P R I Y IH +FFIKKGMSWSAGD
Sbjct: 21  LGQLYKPLVPPSNKFNKLSLLTKFKFKFT----YYPTRTIHYSIHFIFFIKKGMSWSAGD 80

Query: 61  WICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAHNYASR 120
           WICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT V+CGAHNYASR
Sbjct: 81  WICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASR 140

Query: 121 PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHNYASRMEC 180
           PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR+GCG+HNYASRMEC
Sbjct: 141 PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMEC 200

Query: 181 FKCKTPRGFG 188
           FKCKTPR FG
Sbjct: 201 FKCKTPRDFG 206

[Close]

BLAST of Cp4.1LG18g04690 vs. NCBI nr
Match: XP_008465019.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X1 [Cucumis melo])

HSP 1 Score: 354 bits (908), Expect = 5.10e-121
Identity = 158/190 (83.16%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   VGQLYKPPAPPANKFNKLTS-NNFEFSSTNSIHLLPNRNILYYIH-LFFIKKGMSWSAGD 60
           +GQLYKP  PP+NKFNKL+    F+F  T      P R I Y IH +FFIKKGMSWSAGD
Sbjct: 21  LGQLYKPLVPPSNKFNKLSLLTKFKFKFT----YYPTRTIHYSIHFIFFIKKGMSWSAGD 80

Query: 61  WICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAHNYASR 120
           WICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT V+CGAHNYASR
Sbjct: 81  WICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASR 140

Query: 121 PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHNYASRMEC 180
           PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR+GCG+HNYASRMEC
Sbjct: 141 PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMEC 200

Query: 181 FKCKTPRGFG 188
           FKCKTPR FG
Sbjct: 201 FKCKTPRDFG 206

[Close]

BLAST of Cp4.1LG18g04690 vs. NCBI nr
Match: XP_008465020.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo])

HSP 1 Score: 351 bits (900), Expect = 8.13e-120
Identity = 155/189 (82.01%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 1   VGQLYKPPAPPANKFNKLTS-NNFEFSSTNSIHLLPNRNILYYIHLFFIKKGMSWSAGDW 60
           +GQLYKP  PP+NKFNKL+    F+F  T      P R I Y IH  F  KGMSWSAGDW
Sbjct: 21  LGQLYKPLVPPSNKFNKLSLLTKFKFKFT----YYPTRTIHYSIHFIFFIKGMSWSAGDW 80

Query: 61  ICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAHNYASRP 120
           ICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT V+CGAHNYASRP
Sbjct: 81  ICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRP 140

Query: 121 NCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHNYASRMECF 180
           NCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR+GCG+HNYASRMECF
Sbjct: 141 NCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECF 200

Query: 181 KCKTPRGFG 188
           KCKTPR FG
Sbjct: 201 KCKTPRDFG 205

[Close]

BLAST of Cp4.1LG18g04690 vs. NCBI nr
Match: KAE8653078.1 (hypothetical protein Csa_020050 [Cucumis sativus])

HSP 1 Score: 351 bits (900), Expect = 8.13e-120
Identity = 155/189 (82.01%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 1   VGQLYKPPAPPANKFNKLTS-NNFEFSSTNSIHLLPNRNILYYIHLFFIKKGMSWSAGDW 60
           +GQLYKP  PP+NKFNKL+    F+F  T      P R I Y IH  F  KGMSWSAGDW
Sbjct: 21  LGQLYKPLVPPSNKFNKLSLLTKFKFKFT----YYPTRTIHYSIHFIFFIKGMSWSAGDW 80

Query: 61  ICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAHNYASRP 120
           ICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT V+CGAHNYASRP
Sbjct: 81  ICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRP 140

Query: 121 NCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHNYASRMECF 180
           NCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR+GCG+HNYASRMECF
Sbjct: 141 NCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECF 200

Query: 181 KCKTPRGFG 188
           KCKTPR FG
Sbjct: 201 KCKTPRDFG 205

[Close]

BLAST of Cp4.1LG18g04690 vs. NCBI nr
Match: XP_023516205.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023516206.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321 bits (822), Expect = 5.46e-109
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 52  MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCG 111
           MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCG 60

Query: 112 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHN 171
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHN 120

Query: 172 YASRMECFKCKTPRGFG 188
           YASRMECFKCKTPRGFG
Sbjct: 121 YASRMECFKCKTPRGFG 137

[Close]

BLAST of Cp4.1LG18g04690 vs. ExPASy TrEMBL
Match: A0A0A0LWE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306810 PE=4 SV=1)

HSP 1 Score: 354 bits (908), Expect = 2.38e-121
Identity = 158/190 (83.16%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   VGQLYKPPAPPANKFNKLTS-NNFEFSSTNSIHLLPNRNILYYIH-LFFIKKGMSWSAGD 60
           +GQLYKP  PP+NKFNKL+    F+F  T      P R I Y IH +FFIKKGMSWSAGD
Sbjct: 21  LGQLYKPLVPPSNKFNKLSLLTKFKFKFT----YYPTRTIHYSIHFIFFIKKGMSWSAGD 80

Query: 61  WICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAHNYASR 120
           WICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT V+CGAHNYASR
Sbjct: 81  WICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASR 140

Query: 121 PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHNYASRMEC 180
           PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR+GCG+HNYASRMEC
Sbjct: 141 PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMEC 200

Query: 181 FKCKTPRGFG 188
           FKCKTPR FG
Sbjct: 201 FKCKTPRDFG 206

[Close]

BLAST of Cp4.1LG18g04690 vs. ExPASy TrEMBL
Match: A0A1S3CMY6 (uncharacterized protein LOC103502740 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 354 bits (908), Expect = 2.38e-121
Identity = 158/190 (83.16%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   VGQLYKPPAPPANKFNKLTS-NNFEFSSTNSIHLLPNRNILYYIH-LFFIKKGMSWSAGD 60
           +GQLYKP  PP+NKFNKL+    F+F  T      P R I Y IH +FFIKKGMSWSAGD
Sbjct: 21  LGQLYKPLVPPSNKFNKLSLLTKFKFKFT----YYPTRTIHYSIHFIFFIKKGMSWSAGD 80

Query: 61  WICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAHNYASR 120
           WICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT V+CGAHNYASR
Sbjct: 81  WICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASR 140

Query: 121 PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHNYASRMEC 180
           PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR+GCG+HNYASRMEC
Sbjct: 141 PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMEC 200

Query: 181 FKCKTPRGFG 188
           FKCKTPR FG
Sbjct: 201 FKCKTPRDFG 206

[Close]

BLAST of Cp4.1LG18g04690 vs. ExPASy TrEMBL
Match: A0A1S3CNB1 (uncharacterized protein LOC103502740 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 354 bits (908), Expect = 2.47e-121
Identity = 158/190 (83.16%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   VGQLYKPPAPPANKFNKLTS-NNFEFSSTNSIHLLPNRNILYYIH-LFFIKKGMSWSAGD 60
           +GQLYKP  PP+NKFNKL+    F+F  T      P R I Y IH +FFIKKGMSWSAGD
Sbjct: 21  LGQLYKPLVPPSNKFNKLSLLTKFKFKFT----YYPTRTIHYSIHFIFFIKKGMSWSAGD 80

Query: 61  WICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAHNYASR 120
           WICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT V+CGAHNYASR
Sbjct: 81  WICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASR 140

Query: 121 PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHNYASRMEC 180
           PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR+GCG+HNYASRMEC
Sbjct: 141 PNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMEC 200

Query: 181 FKCKTPRGFG 188
           FKCKTPR FG
Sbjct: 201 FKCKTPRDFG 206

[Close]

BLAST of Cp4.1LG18g04690 vs. ExPASy TrEMBL
Match: A0A1S3CPF6 (uncharacterized protein LOC103502740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 3.94e-120
Identity = 155/189 (82.01%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 1   VGQLYKPPAPPANKFNKLTS-NNFEFSSTNSIHLLPNRNILYYIHLFFIKKGMSWSAGDW 60
           +GQLYKP  PP+NKFNKL+    F+F  T      P R I Y IH  F  KGMSWSAGDW
Sbjct: 21  LGQLYKPLVPPSNKFNKLSLLTKFKFKFT----YYPTRTIHYSIHFIFFIKGMSWSAGDW 80

Query: 61  ICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAHNYASRP 120
           ICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT V+CGAHNYASRP
Sbjct: 81  ICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRP 140

Query: 121 NCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHNYASRMECF 180
           NCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR+GCG+HNYASRMECF
Sbjct: 141 NCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECF 200

Query: 181 KCKTPRGFG 188
           KCKTPR FG
Sbjct: 201 KCKTPRDFG 205

[Close]

BLAST of Cp4.1LG18g04690 vs. ExPASy TrEMBL
Match: A0A6J1JBM0 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485301 PE=4 SV=1)

HSP 1 Score: 319 bits (817), Expect = 1.52e-108
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 52  MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCG 111
           MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAV+CG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60

Query: 112 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHN 171
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHN 120

Query: 172 YASRMECFKCKTPRGFG 188
           YASRMECFKCKTPRGFG
Sbjct: 121 YASRMECFKCKTPRGFG 137

[Close]

BLAST of Cp4.1LG18g04690 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 219.5 bits (558), Expect = 3.1e-57
Identity = 91/139 (65.47%), Postives = 110/139 (79.14%), Query Frame = 0


Query: 52  MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCG 111
           MSW+ GDW+C  CQ+ NFKKRE+C +C YPK+GG D STY YN+TEV+AGDWYC A+NCG
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCG 60

Query: 112 AHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYGSD-ASIPPGWKSGDWVCPRIGCGI 171
           +HNYASR +C+RCG  K  Y    YGA M+    YG+D A+ PPGWK+GDWVCPR+GCG+
Sbjct: 61  SHNYASRTSCYRCGMIKVEYTEQYYGAQMVA---YGNDGAACPPGWKTGDWVCPRVGCGV 120

Query: 172 HNYASRMECFKCKTPRGFG 189
           HNYASR ECFKCKT R +G
Sbjct: 121 HNYASRAECFKCKTTRDYG 136

[Close]

BLAST of Cp4.1LG18g04690 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 5.4e-33
Identity = 66/154 (42.86%), Postives = 86/154 (55.84%), Query Frame = 0


Query: 57  GDWICNVCQNVNFKKREACHRC-------------SYPKYGGPDPSTYSYNK-TEVLAGD 116
           GDW C  C ++NF++R++C RC              +  +GG   S + +   ++V  GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 117 WYCTAVNCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMGSDQYGSD--ASIPPG----- 176
           WYCT  NCG HN+ASR  CF+CG FK     G  G  + G   + +D   S  PG     
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

Query: 177 -WKSGDWVCPRIGCGIHNYASRMECFKCKTPRGF 188
            WKSGDW+C RIGC  HN+ASRMECF+C  PR F
Sbjct: 125 SWKSGDWICTRIGCNEHNFASRMECFRCNAPRDF 158

[Close]

BLAST of Cp4.1LG18g04690 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 5.0e-31
Identity = 59/158 (37.34%), Postives = 83/158 (52.53%), Query Frame = 0


Query: 57  GDWICNVCQNVNFKKREACHRCSYPKYGG------------PDPSTYSYNK-TEVLAGDW 116
           GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +V  GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 117 YCTAVNCGAHNYASRPNCFRCGAFKSVYPGD----------------YGAYMMGSDQYGS 176
           YC   +CG HN+A+R +CF+CGA K  +                    G +  G    G 
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

Query: 177 DASIPPGWKSGDWVCPRIGCGIHNYASRMECFKCKTPR 186
             +    WKSGDW+CPR GC  HN+ASR ECF+C  P+
Sbjct: 125 GGTGRSPWKSGDWICPRSGCNEHNFASRSECFRCNAPK 162

[Close]

BLAST of Cp4.1LG18g04690 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 62.0 bits (149), Expect = 8.4e-10
Identity = 41/138 (29.71%), Postives = 62/138 (44.93%), Query Frame = 0


Query: 54  WSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAH 113
           W +GDWIC  C   N+  R  C +C+      P         +E LA +W    +N G  
Sbjct: 126 WRSGDWICR-CGFHNYSSRIQCKKCNEI---APLALGTKRLASEALAHEWDSKRLNQGYT 185

Query: 114 NYASRPNCFRCGAFKSVYPGDYGAYMMG---SDQYGSDASIPPG---WKSGDWVCPRIGC 173
           +  ++   +   +F  +  G    + +      Q+ + A +  G   W+ GDW+C    C
Sbjct: 186 SMQTQSAIY--ASFPGMSLGRVSNWQLPLPFLQQHSTPALLGMGVKQWRDGDWMC--TNC 245

Query: 174 GIHNYASRMECFKCKTPR 186
             HNYASR EC +CKT R
Sbjct: 246 KNHNYASRAECNRCKTTR 255

[Close]

BLAST of Cp4.1LG18g04690 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 6.9e-04
Identity = 22/83 (26.51%), Postives = 34/83 (40.96%), Query Frame = 0


Query: 57  GDWICNVCQNVNFKKREACHRCS-YPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCGAHNY 116
           GDW C  C+ +NF K   C RC  + +           +   +  GDW C    C   N+
Sbjct: 236 GDWYCTECKFLNFAKNIRCLRCDVFSEERLKQLKEEQKDHLPLKKGDWICQ--TCNFLNF 295

Query: 117 ASRPNCFRC---GAFKSVYPGDY 136
           +    C RC      + + PG++
Sbjct: 296 SKNTRCLRCKDKPTLRQINPGEW 316

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g04690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	2.2e-07	26.15	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]
Q5ZLX5	1.2e-05	38.20	Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=...	[more]
O95218	6.0e-05	37.08	Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z...	[more]
Q9R020	6.0e-05	37.08	Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=...	[more]
Q19QU3	6.0e-05	37.08	Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRA...	[more]

BLAST of Cp4.1LG18g04690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465021.2	4.93e-121	83.16	PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo]	[more]
XP_008465019.2	5.10e-121	83.16	PREDICTED: uncharacterized protein LOC103502740 isoform X1 [Cucumis melo]	[more]
XP_008465020.2	8.13e-120	82.01	PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo]	[more]
KAE8653078.1	8.13e-120	82.01	hypothetical protein Csa_020050 [Cucumis sativus]	[more]
XP_023516205.1	5.46e-109	100.00	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. ...	[more]

BLAST of Cp4.1LG18g04690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWE1	2.38e-121	83.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306810 PE=4 SV=1	[more]
A0A1S3CMY6	2.38e-121	83.16	uncharacterized protein LOC103502740 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CNB1	2.47e-121	83.16	uncharacterized protein LOC103502740 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CPF6	3.94e-120	82.01	uncharacterized protein LOC103502740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JBM0	1.52e-108	99.27	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=...	[more]

BLAST of Cp4.1LG18g04690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26695.1	3.1e-57	65.47	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	5.4e-33	42.86	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	5.0e-31	37.34	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	8.4e-10	29.71	zinc finger (Ran-binding) family protein	[more]
AT1G70650.1	6.9e-04	26.51	Ran BP2/NZF zinc finger-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 158..184 e-value: 6.4E-7 score: 39.0 coord: 101..127 e-value: 8.6E-5 score: 31.9 coord: 57..81 e-value: 1.6E-5 score: 34.4
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 100..128 e-value: 9.4E-6 score: 24.8 coord: 156..185 e-value: 2.7E-8 score: 33.0 coord: 55..83 e-value: 1.9E-6 score: 27.1
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 59..78
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 103..124
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 160..181
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 55..84 score: 9.133901
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 99..130 score: 9.009686
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 156..187 score: 9.992108
None	No IPR available	GENE3D	4.10.1060.10		coord: 90..130 e-value: 2.0E-10 score: 41.7 coord: 48..86 e-value: 7.2E-11 score: 43.2 coord: 151..186 e-value: 8.0E-12 score: 46.2
None	No IPR available	PANTHER	PTHR23111:SF41	ZINC FINGER, RANBP2-TYPE-RELATED	coord: 36..189
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 36..189
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 152..187
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 95..129
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 50..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g04690.1	Cp4.1LG18g04690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding