Cp4.1LG18g04640 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGGTTACAGAGGTCCGCCGTGTCATTCCGGCGACAAGGCTCCTCCGGCTTGGTCTGGGACGACAGATACTTCAGTGGCGAATTGACACCGACAATGCGCCGTCATGAAGAACAACCTCAACGTGACGCTCTTTTCCTTTCCGGAGAATTGAGGCCTTCTCGCAACGTTGGATCCGCCTCCACCTTTGAACGGTCACGATCTTCCGCCTCCCATAGAATAGAGGCTATATCCCCGTCACGGTCCCCGAGCGCCGCCAATCCATCTTCACCGAAGTTCACTGGCTGCGGCTTCTGCGGCGTCTTTGGCCGACCCATCGGCGGTGCTCGCCACCACAAATCCAAGCGTTGA ATGGCGGGGTTACAGAGGTCCGCCGTGTCATTCCGGCGACAAGGCTCCTCCGGCTTGGTCTGGGACGACAGATACTTCAGTGGCGAATTGACACCGACAATGCGCCGTCATGAAGAACAACCTCAACGTGACGCTCTTTTCCTTTCCGGAGAATTGAGGCCTTCTCGCAACGTTGGATCCGCCTCCACCTTTGAACGGTCACGATCTTCCGCCTCCCATAGAATAGAGGCTATATCCCCGTCACGGTCCCCGAGCGCCGCCAATCCATCTTCACCGAAGTTCACTGGCTGCGGCTTCTGCGGCGTCTTTGGCCGACCCATCGGCGGTGCTCGCCACCACAAATCCAAGCGTTGA ATGGCGGGGTTACAGAGGTCCGCCGTGTCATTCCGGCGACAAGGCTCCTCCGGCTTGGTCTGGGACGACAGATACTTCAGTGGCGAATTGACACCGACAATGCGCCGTCATGAAGAACAACCTCAACGTGACGCTCTTTTCCTTTCCGGAGAATTGAGGCCTTCTCGCAACGTTGGATCCGCCTCCACCTTTGAACGGTCACGATCTTCCGCCTCCCATAGAATAGAGGCTATATCCCCGTCACGGTCCCCGAGCGCCGCCAATCCATCTTCACCGAAGTTCACTGGCTGCGGCTTCTGCGGCGTCTTTGGCCGACCCATCGGCGGTGCTCGCCACCACAAATCCAAGCGTTGA MAGLQRSAVSFRRQGSSGLVWDDRYFSGELTPTMRRHEEQPQRDALFLSGELRPSRNVGSASTFERSRSSASHRIEAISPSRSPSAANPSSPKFTGCGFCGVFGRPIGGARHHKSKR Homology
BLAST of Cp4.1LG18g04640 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.7e-09 Identity = 49/135 (36.30%), Postives = 67/135 (49.63%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 8.8e-09 Identity = 47/137 (34.31%), Postives = 65/137 (47.45%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. NCBI nr
Match: XP_023516734.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 236 bits (601), Expect = 3.25e-78 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. NCBI nr
Match: XP_022987911.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]) HSP 1 Score: 228 bits (582), Expect = 2.58e-75 Identity = 113/117 (96.58%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. NCBI nr
Match: XP_022960593.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita moschata] >KAG6589861.1 hypothetical protein SDJN03_15284, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 228 bits (581), Expect = 3.66e-75 Identity = 113/116 (97.41%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. NCBI nr
Match: KAG7023533.1 (hypothetical protein SDJN02_14559, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214 bits (545), Expect = 2.41e-69 Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. NCBI nr
Match: XP_022933695.1 (uncharacterized protein At1g15400-like [Cucurbita moschata]) HSP 1 Score: 173 bits (438), Expect = 2.41e-53 Identity = 86/117 (73.50%), Postives = 97/117 (82.91%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. ExPASy TrEMBL
Match: A0A6J1JFP4 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111485313 PE=4 SV=1) HSP 1 Score: 228 bits (582), Expect = 1.25e-75 Identity = 113/117 (96.58%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. ExPASy TrEMBL
Match: A0A6J1H9E8 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LOC111461328 PE=4 SV=1) HSP 1 Score: 228 bits (581), Expect = 1.77e-75 Identity = 113/116 (97.41%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. ExPASy TrEMBL
Match: A0A6J1F5J7 (uncharacterized protein At1g15400-like OS=Cucurbita moschata OX=3662 GN=LOC111441031 PE=4 SV=1) HSP 1 Score: 173 bits (438), Expect = 1.17e-53 Identity = 86/117 (73.50%), Postives = 97/117 (82.91%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. ExPASy TrEMBL
Match: A0A6J1HNM7 (uncharacterized protein At1g15400-like OS=Cucurbita maxima OX=3661 GN=LOC111465235 PE=4 SV=1) HSP 1 Score: 171 bits (434), Expect = 4.75e-53 Identity = 85/117 (72.65%), Postives = 96/117 (82.05%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. ExPASy TrEMBL
Match: A0A5A7TZI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00370 PE=4 SV=1) HSP 1 Score: 161 bits (408), Expect = 4.78e-49 Identity = 82/119 (68.91%), Postives = 96/119 (80.67%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 2.8e-10 Identity = 46/120 (38.33%), Postives = 61/120 (50.83%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 4.8e-10 Identity = 49/135 (36.30%), Postives = 67/135 (49.63%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 6.3e-10 Identity = 47/137 (34.31%), Postives = 65/137 (47.45%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 6.3e-10 Identity = 47/137 (34.31%), Postives = 65/137 (47.45%), Query Frame = 0
BLAST of Cp4.1LG18g04640 vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 6.3e-10 Identity = 47/137 (34.31%), Postives = 65/137 (47.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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