Cp4.1LG18g04350 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g04350
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG18: 5417562 .. 5418708 (+)
RNA-Seq Expression	Cp4.1LG18g04350
Synteny	Cp4.1LG18g04350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTACGAGCCTCCATTTCCAACACCAAGAAGTTCTTCAACAAAACCTTATGCAACATCAAATCCTTCTTCTCCAATACCTACCAGCGGCTTCCCAAGGCGGCGCCGCCCTTCTCCATCGGCCACGAAATGGATAAAGACTCATCCTTTATGAAGAATAGTAATGGCAATGCAGTTCATTTTTCGAAGACGATCGACGAGACCCAGATGAAAAAAGTTGAGAAAAATGAAGATAGCATCAAAATTGGAGTGACCCATCAAAGGAAAACGCAAGAAAATTTGAAAGAGTATGATGAGAGAAGAATGTGTTCGGTTGCTAAGAAAATGAAAGAGTTGGAAAAGCTAGACGCTAGAGATGTGGATCATGCTTTGGATATTGAAGAGATTCTTCATTACTACTCTCGTCTCTCTTGTCCAACGTACCTTGAGATTGTGGACAAGTTCTTCATGGACATTTTTGCTGAATTTTGTGCTAATCCATCTTCTCAACAAATTAACCCAATTGGGCACGAATCATCAGCGGGGTTAGTGAGAAGAAAATCTCGTTTAGGAAACGTGGAGTCTTCGTCTTCTAATTCTTCTAGACCATATTTCTGATAGATGATATTGTCCATTCTGAGCGTTGTGCTTGCCCTCACACCAATGGAGATGTATTTTTTACTTATGAACAAACTCATTATCATTCCCTAAATTAGCTAATATGAATTCCTTCCCACAGTTCTCAACAATTCCATAATTTCATTTTTAGTAAATTTGAACGGAAGTGTTTATGATTCATCTGGATTCATAAATGGTAAGATAGAGTCGTTTGGATAACATAATTGGTGTGTTTTTGCTCAACTAATTCGGAGGGTGAATGGACGCTTTACTTTTGGGAGAAAGAAACCCAATTAGGAGTTATAAGCCTTGGATTCTAAGTTATGCCTTGGATTCTAAGTTATGTTTTCAAAAAGAAATAATTTATGGTTTGATTGTATTATATGAGTAAAAGCTCAATAGAAGATTATCCAAATCATGATGAAAATCATGAACAAAAGAATCTTAATTTGAACAGGAAACATTCGAATCCAATGAAAATTTTGAAGACAGGAGAAAAGGGATGCCTCCAAAAGTGTGGGAAGAGCTGGATGAAGCAAATCCATGA

mRNA sequence

ATGTTGCTACGAGCCTCCATTTCCAACACCAAGAAGTTCTTCAACAAAACCTTATGCAACATCAAATCCTTCTTCTCCAATACCTACCAGCGGCTTCCCAAGGCGGCGCCGCCCTTCTCCATCGGCCACGAAATGGATAAAGACTCATCCTTTATGAAGAATAGTAATGGCAATGCAGTTCATTTTTCGAAGACGATCGACGAGACCCAGATGAAAAAAGTTGAGAAAAATGAAGATAGCATCAAAATTGGAGTGACCCATCAAAGGAAAACGCAAGAAAATTTGAAAGAGTATGATGAGAGAAGAATGTGTTCGGTTGCTAAGAAAATGAAAGAGTTGGAAAAGCTAGACGCTAGAGATGTGGATCATGCTTTGGATATTGAAGAGATTCTTCATTACTACTCTCGTCTCTCTTGTCCAACGTACCTTGAGATTGTGGACAAGTTCTTCATGGACATTTTTGCTGAATTTTGTGCTAATCCATCTTCTCAACAAATTAACCCAATTGGGCACGAATCATCAGCGGGGAGAAAAGGGATGCCTCCAAAAGTGTGGGAAGAGCTGGATGAAGCAAATCCATGA

Coding sequence (CDS)

ATGTTGCTACGAGCCTCCATTTCCAACACCAAGAAGTTCTTCAACAAAACCTTATGCAACATCAAATCCTTCTTCTCCAATACCTACCAGCGGCTTCCCAAGGCGGCGCCGCCCTTCTCCATCGGCCACGAAATGGATAAAGACTCATCCTTTATGAAGAATAGTAATGGCAATGCAGTTCATTTTTCGAAGACGATCGACGAGACCCAGATGAAAAAAGTTGAGAAAAATGAAGATAGCATCAAAATTGGAGTGACCCATCAAAGGAAAACGCAAGAAAATTTGAAAGAGTATGATGAGAGAAGAATGTGTTCGGTTGCTAAGAAAATGAAAGAGTTGGAAAAGCTAGACGCTAGAGATGTGGATCATGCTTTGGATATTGAAGAGATTCTTCATTACTACTCTCGTCTCTCTTGTCCAACGTACCTTGAGATTGTGGACAAGTTCTTCATGGACATTTTTGCTGAATTTTGTGCTAATCCATCTTCTCAACAAATTAACCCAATTGGGCACGAATCATCAGCGGGGAGAAAAGGGATGCCTCCAAAAGTGTGGGAAGAGCTGGATGAAGCAAATCCATGA

Protein sequence

MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSFMKNSNGNAVHFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAGRKGMPPKVWEELDEANP

Homology

[Close]

BLAST of Cp4.1LG18g04350 vs. NCBI nr
Match: XP_023515883.1 (uncharacterized protein LOC111779922 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351 bits (900), Expect = 3.07e-121
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSFMKNSNGNAV 60
           MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSFMKNSNGNAV
Sbjct: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSFMKNSNGNAV 60

Query: 61  HFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARD 120
           HFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARD
Sbjct: 61  HFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARD 120

Query: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAG 176
           VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAG
Sbjct: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAG 176

[Close]

BLAST of Cp4.1LG18g04350 vs. NCBI nr
Match: XP_022960595.1 (uncharacterized protein LOC111461329 [Cucurbita moschata])

HSP 1 Score: 329 bits (843), Expect = 1.30e-112
Identity = 165/176 (93.75%), Postives = 168/176 (95.45%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSFMKNSNGNAV 60
           M+LRASI+NTKKFFNKTLCN KSFFSNTYQRLPKA PPFSIGHEMDKDSSFMKNSNGNAV
Sbjct: 1   MMLRASIANTKKFFNKTLCNFKSFFSNTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAV 60

Query: 61  HFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARD 120
            FSKT+DETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMC VAKKMKELEKLDARD
Sbjct: 61  RFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCLVAKKMKELEKLDARD 120

Query: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAG 176
           VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCAN SSQQ NPIG ESS G
Sbjct: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG 176

[Close]

BLAST of Cp4.1LG18g04350 vs. NCBI nr
Match: KAG7023581.1 (hypothetical protein SDJN02_14607, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327 bits (838), Expect = 8.06e-112
Identity = 164/176 (93.18%), Postives = 168/176 (95.45%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSFMKNSNGNAV 60
           M+LRASI+NTKKFFNKTLCN KSFFS+TYQRLPKA PPFSIGHEMDKDSSFMKNSNGNAV
Sbjct: 1   MMLRASIANTKKFFNKTLCNFKSFFSSTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAV 60

Query: 61  HFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARD 120
            FSKT+DETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMC VAKKMKELEKLDARD
Sbjct: 61  RFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCLVAKKMKELEKLDARD 120

Query: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAG 176
           VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCAN SSQQ NPIG ESS G
Sbjct: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG 176

[Close]

BLAST of Cp4.1LG18g04350 vs. NCBI nr
Match: KAG6589911.1 (hypothetical protein SDJN03_15334, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325 bits (832), Expect = 7.35e-111
Identity = 163/176 (92.61%), Postives = 166/176 (94.32%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSFMKNSNGNAV 60
           M+LRASI+NTKKFFNKTLCN KSFFSNTYQRLPKA PPFSIGHEMDKDSSFMKN  GNAV
Sbjct: 1   MMLRASIANTKKFFNKTLCNFKSFFSNTYQRLPKAPPPFSIGHEMDKDSSFMKNRTGNAV 60

Query: 61  HFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARD 120
            FSKT+DETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMC VAKKMKELEKLDARD
Sbjct: 61  RFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCLVAKKMKELEKLDARD 120

Query: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAG 176
           VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCAN SSQQ NPIG ESS G
Sbjct: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG 176

[Close]

BLAST of Cp4.1LG18g04350 vs. NCBI nr
Match: XP_022987886.1 (uncharacterized protein LOC111485292 [Cucurbita maxima])

HSP 1 Score: 301 bits (772), Expect = 5.45e-102
Identity = 155/176 (88.07%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSFMKNSNGNAV 60
           M+LRASIS+TKKFFNKTLCN KSFFSNTYQRLPK          MDKDSSFMKNSNGNAV
Sbjct: 1   MMLRASISSTKKFFNKTLCNFKSFFSNTYQRLPK----------MDKDSSFMKNSNGNAV 60

Query: 61  HFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARD 120
           HFSKTI ETQMKKVEKNEDSIKIG THQRKTQENLK YDERRMC VAKKMKELEKLDARD
Sbjct: 61  HFSKTIRETQMKKVEKNEDSIKIGATHQRKTQENLKVYDERRMCLVAKKMKELEKLDARD 120

Query: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAG 176
           VDHALDIEEILHYYSRLSCPTYL+IVDKFFMDIFAEFCANPSSQQ NPIGH+SS G
Sbjct: 121 VDHALDIEEILHYYSRLSCPTYLQIVDKFFMDIFAEFCANPSSQQTNPIGHQSSVG 166

[Close]

BLAST of Cp4.1LG18g04350 vs. ExPASy TrEMBL
Match: A0A6J1H9I9 (uncharacterized protein LOC111461329 OS=Cucurbita moschata OX=3662 GN=LOC111461329 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 6.30e-113
Identity = 165/176 (93.75%), Postives = 168/176 (95.45%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSFMKNSNGNAV 60
           M+LRASI+NTKKFFNKTLCN KSFFSNTYQRLPKA PPFSIGHEMDKDSSFMKNSNGNAV
Sbjct: 1   MMLRASIANTKKFFNKTLCNFKSFFSNTYQRLPKAPPPFSIGHEMDKDSSFMKNSNGNAV 60

Query: 61  HFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARD 120
            FSKT+DETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMC VAKKMKELEKLDARD
Sbjct: 61  RFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCLVAKKMKELEKLDARD 120

Query: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAG 176
           VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCAN SSQQ NPIG ESS G
Sbjct: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQTNPIGKESSVG 176

[Close]

BLAST of Cp4.1LG18g04350 vs. ExPASy TrEMBL
Match: A0A6J1JFL9 (uncharacterized protein LOC111485292 OS=Cucurbita maxima OX=3661 GN=LOC111485292 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 2.64e-102
Identity = 155/176 (88.07%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSFMKNSNGNAV 60
           M+LRASIS+TKKFFNKTLCN KSFFSNTYQRLPK          MDKDSSFMKNSNGNAV
Sbjct: 1   MMLRASISSTKKFFNKTLCNFKSFFSNTYQRLPK----------MDKDSSFMKNSNGNAV 60

Query: 61  HFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARD 120
           HFSKTI ETQMKKVEKNEDSIKIG THQRKTQENLK YDERRMC VAKKMKELEKLDARD
Sbjct: 61  HFSKTIRETQMKKVEKNEDSIKIGATHQRKTQENLKVYDERRMCLVAKKMKELEKLDARD 120

Query: 121 VDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAG 176
           VDHALDIEEILHYYSRLSCPTYL+IVDKFFMDIFAEFCANPSSQQ NPIGH+SS G
Sbjct: 121 VDHALDIEEILHYYSRLSCPTYLQIVDKFFMDIFAEFCANPSSQQTNPIGHQSSVG 166

[Close]

BLAST of Cp4.1LG18g04350 vs. ExPASy TrEMBL
Match: A0A6J1IF62 (uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 1.42e-80
Identity = 131/183 (71.58%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDS----SFMKNSN 60
           M L  SIS TKKFF KT+CN KSFFSNTY RLPKAAPPF+ G EM KD     SF K++ 
Sbjct: 39  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKDEVQNGSFTKSNG 98

Query: 61  GNAVHFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQEN----------LKEYDERRMCSV 120
            NAVHFSKTID+TQM +VEKNE SIKIG THQRK+QEN          L EYDERR+C V
Sbjct: 99  NNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRESRSKRSRRLYEYDERRVCLV 158

Query: 121 AKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQI 169
           AKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+N SS Q 
Sbjct: 159 AKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQH 218

[Close]

BLAST of Cp4.1LG18g04350 vs. ExPASy TrEMBL
Match: A0A6J1F4Y2 (uncharacterized protein LOC111440909 OS=Cucurbita moschata OX=3662 GN=LOC111440909 PE=4 SV=1)

HSP 1 Score: 241 bits (615), Expect = 2.26e-78
Identity = 131/184 (71.20%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPP-FSIGHEMDKDS----SFMKNS 60
           M L  SIS TKKFF KTLCN KSFFSNTY RLPKA PP F+ G EM KD     SF K++
Sbjct: 1   MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSN 60

Query: 61  NGNAVHFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQEN----------LKEYDERRMCS 120
             NAVHFSKTID+TQM +VEKNE SIKIG THQRKTQEN          L EYDERR+C 
Sbjct: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120

Query: 121 VAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQ 169
           VAKK+KELEKLDAR+V H+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+N SS Q
Sbjct: 121 VAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180

[Close]

BLAST of Cp4.1LG18g04350 vs. ExPASy TrEMBL
Match: A0A6J1CV44 (uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014544 PE=4 SV=1)

HSP 1 Score: 207 bits (528), Expect = 9.65e-65
Identity = 119/193 (61.66%), Postives = 137/193 (70.98%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSIGHEMDKDSSF--------- 60
           MLLRASISNTKKFF KT+CN KSFFS +Y RLPK  PPF+ G  M+KDS+F         
Sbjct: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPRMEKDSTFQFISSQKEV 60

Query: 61  -----MKNSNGNAVHFSKTIDETQM--KKVEKNEDSIK-IGVTHQRKTQENLKE------ 120
                MKN N NA+HF   ++ETQM  + V+K+  S+  IG THQRK QEN         
Sbjct: 61  QSGGFMKN-NSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKY 120

Query: 121 -YDERRMCSVAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAE 169
             DERRMC VAKK+KELEKLD+R+VDHALDIEEILHYYSRL+CP YLEIVDKFF +IFAE
Sbjct: 121 IIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAE 180

[Close]

BLAST of Cp4.1LG18g04350 vs. TAIR 10
Match: AT1G15260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 3.3e-16
Identity = 59/177 (33.33%), Postives = 92/177 (51.98%), Query Frame = 0


Query: 6   SISNTKKFFNKTLCNIKS-FFSNTYQRLPKAAP---PFSIGHEMDKDSSFMKNSNGNAVH 65
           SI    +F  KTL +IKS   S+ Y+ LP   P   P+S      +DS      +   + 
Sbjct: 8   SIQRVGRFLKKTLGSIKSTICSSDYKNLPNDTPLLSPYSCSRRCPEDSQTQTKESYTVIC 67

Query: 66  FSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDE--RRMCSVAKKMKELEKLDAR 125
               + +T  +K   N+        H++K ++  + +++  +R  ++A+KMK+L  +D R
Sbjct: 68  CDTAVADTTHQKSLNNQ--------HKKKPKKVAEPFEDAKKRGDALAQKMKDLNMVDLR 127

Query: 126 DVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANPSSQQINPIGHESSAG 177
           DVDHALD+ E L  YS +  P YL+IVD FF D++ EF    +S +IN  G    AG
Sbjct: 128 DVDHALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSAKIN--GSRRKAG 174

[Close]

BLAST of Cp4.1LG18g04350 vs. TAIR 10
Match: AT3G24535.1 (unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 6.9e-14
Identity = 55/163 (33.74%), Postives = 85/163 (52.15%), Query Frame = 0


Query: 1   MLLRASISNTKKFFNKTLCNIKSFFSN--TYQRLPKAAPPFSIGHEMDKDSSFMKNSNGN 60
           M+LR+SISNT+K F KT+ N KSFF N  TY +LPK     S     D  +S +  S+ +
Sbjct: 1   MVLRSSISNTRKLFQKTIDNFKSFFFNNGTYHKLPKTPNNTSTNINNDHPNSNIITSSSS 60

Query: 61  AVHFSKTIDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDA 120
           ++H  K         V  N    K      R    +   + + ++  V  K+KE+EK+  
Sbjct: 61  SIH--KQFQPKPKDYVTTN----KASSLQPRIGDRDETLFSQPKVNLVRTKLKEMEKMMN 120

Query: 121 RDV----DHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEF 158
            D+     +  D+ E LH YSRL    YL++V+ FFM+++++F
Sbjct: 121 DDIISDEYYVSDVIEFLHCYSRLRYTAYLDVVENFFMEVYSDF 157

[Close]

BLAST of Cp4.1LG18g04350 vs. TAIR 10
Match: AT3G16070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15260.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-13
Identity = 50/150 (33.33%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 10  TKKFFNKTLCNIKSFFSNTYQRLPKAAPPFSI----GHEMDKDSSFMKNSNGNAVHFSKT 69
           T  FF++TL ++KS      ++LP+    FS      + +D D+ +    N        +
Sbjct: 5   TNSFFHRTLHSLKSIIIRAGKKLPRPKTHFSCTFCRSNSLDGDNIYASFLNIWESDLENS 64

Query: 70  IDETQMKKVEKNEDSIKIGVTHQRKTQENLKEYDERRMCSVAKKMKELEKLDARDVDHAL 129
           I E  +K   K ++  +    HQ K  E    Y  R   ++ KK+ E+   +  D++ AL
Sbjct: 65  I-EGPLKLEHKVQEQEQY---HQVKKTEACSSYSSRDCDTMEKKINEMYMTETVDIEQAL 124

Query: 130 DIEEILHYYSRLSCPTYLEIVDKFFMDIFA 156
           D+EE LHYYSR+S P YL IVDKFF D+++
Sbjct: 125 DVEEALHYYSRISSPVYLNIVDKFFTDLYS 150

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g04350 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g04350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515883.1	3.07e-121	100.00	uncharacterized protein LOC111779922 [Cucurbita pepo subsp. pepo]	[more]
XP_022960595.1	1.30e-112	93.75	uncharacterized protein LOC111461329 [Cucurbita moschata]	[more]
KAG7023581.1	8.06e-112	93.18	hypothetical protein SDJN02_14607, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589911.1	7.35e-111	92.61	hypothetical protein SDJN03_15334, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022987886.1	5.45e-102	88.07	uncharacterized protein LOC111485292 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG18g04350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9I9	6.30e-113	93.75	uncharacterized protein LOC111461329 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1JFL9	2.64e-102	88.07	uncharacterized protein LOC111485292 OS=Cucurbita maxima OX=3661 GN=LOC111485292...	[more]
A0A6J1IF62	1.42e-80	71.58	uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233...	[more]
A0A6J1F4Y2	2.26e-78	71.20	uncharacterized protein LOC111440909 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]
A0A6J1CV44	9.65e-65	61.66	uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of Cp4.1LG18g04350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15260.1	3.3e-16	33.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G24535.1	6.9e-14	33.74	unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bact...	[more]
AT3G16070.1	2.0e-13	33.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..193
None	No IPR available	PANTHER	PTHR35461	BNAANNG14610D PROTEIN	coord: 1..48
None	No IPR available	PANTHER	PTHR35461:SF3	BNAANNG14610D PROTEIN	coord: 49..164 coord: 1..48
None	No IPR available	PANTHER	PTHR35461	BNAANNG14610D PROTEIN	coord: 49..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g04350.1	Cp4.1LG18g04350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane