Cp4.1LG18g04180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g04180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein LIKE COV 1-like
Location	Cp4.1LG18: 5375655 .. 5380071 (+)
RNA-Seq Expression	Cp4.1LG18g04180
Synteny	Cp4.1LG18g04180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTGACTTCAAAGGGTTGCCTTGTTGCCGGTCTACTGTCTTCGGGGCGAAGGTTTTTAAGCTGCAGAACGCTGTGGCTGGGCTTTCCAATAGGGGCTGCCGTTAATGGCCGACGAAAAAGCGGCGATTGCGATCGCCAGCAGAGATAGAGAGCGAGATCTACAGCTTCTAATTCCCGTTGCCGGCTCGCCAAATGACGTTGCTGCCTCTTGTAAGCCGTCATCCTCTTCATCGTCCTCGCAGCAGACTGGACGCGAGGTATTCTTTACTTCTTTTCAATTCATTCTTTTACCTCCTGATCGTTGGAAGCTAGTCAGTGGTGTTGCTTGTTGTTATCTTGAAATTTCTGTGTGTCGCAGTCGATTTTAGGTTCGGTTTGGTTTTGTGTTAATCAGTTCAATCGTGGCAGTCGCCTTCCTCCTCCTCTTCTCCCATTTTTCTGTTTCTTCTCGTTCTTGTGTTGCTTGGTGGACTGTTTTTGTCATGGTTGGAGCACGAGTTCATCCTTATGTACTTTAATTATTCACTCTACCATATTTTATACGTTAGAAGTCTTACGCTTTTGGAATTATCAAGGTGTTTCTCCACTGTAGGGGTCAATTGATCCAATCGATATTTCTGAATTGTGGCCCTCAGAGATTATGTTTTAGATGCCTTGTGGTCGCTCTTGTATGATTCATAAAAAGGCACTCCTTCAAGAGTTTGATAACTTCACAATTCTTTTCGATTTTGAAAAGTTACCGATGGAATACTTACAACTGCTTCCTCTCAAAAGAAAAAAAAAAAAAAAAAATAATGGGAGTATTTACTTCAGTACGGATGTTGAAAACTCAAATCTTTTAAATGTCTAGTTTACTCTATGAAGTTATTAATACTATAGTTGGAATAGCTATGGATGTGTACTACACCAACTTAATTAGCTGATGGAGAATGTTGAAATCTTTTCTTTTTATGTATCAAGCTTATTTTAGCCTTTCTGTCATTTAAAATTGGAATAGCCAATTACTCGTTATTCAAATTTTCAATCAGTGTTTATTTTCTATCACCAACGGGGTTCGAATATCTATTTTTTCTCCTACTGTGCAGACATTTTACAGAGTTTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACCGGATGGTTTGTTATTTTTTCTTTTCGTTGTAGTTAATTTTATTCAATGTTTTGATGCTAAGAAAACATGGCATATAAACTAAACTTGATAGGTAGCGTTTCTTGCATATGCATTGTAGCCATCGTTGCTAAAATTGCACTTTCAGGCTGCTGTTTGAAAACTGCAAATGAAAGTTTGTTCTATTTTTGTAATGGAATAGAGTTGTTATTTGATTCAGAAAGTATGTTCAGCAGGGTAATAGGTTTTGAATTGGAAGTAAATATTTATTTGTCTTCAACTTACCAGGATTTCCAATTACATTTGTTTGTCATTGTGCTAACTGCTGGGTGATAAGTGATAATAGTGTTTTAATACCTTAACGAGTTACCATCTGGCTGTTTTGCAGTGTCATTCTATTTCCAATTGCAATAACTTTCTATATAACGTGGTGGTTTATTCACTTTGTGGATGGATTTTTTTCTCCGATCTATGCAAAACTTGGAATTAATATCTTTGGTAAGCAATCTTTATCACTGAACACTTCGTCTCAACCCATTCAGTCCATGTGCAATTTGTTTCGTGTGCATTTTATACTACCTACATGAGTGATCATCGTTTTTTACCTCATCAATATCTGTTTTCTATTTGCTGCTCATATTCAGATAGGAAATATCGAAAATAATTATGTAAATGCTTATATTGCCAGATGATTAATGAGTGTTCGTTCATTGCGAAAACCTGTTAAATTGTAAATTTCAAAGTTTCTTATCATTAGCTTATTCTCATTTCTTGAATAGGTCTTGGATTTGCAACATCTGTATCGTTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGGTACATCTTTCGTAAGTGTATTTATTTAACTTGGTCAGGTTTATATATGAACCATCTATAATCTCGTCATTTTCTGTTAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCATTTGGGTTCATTACTTCAACTGTCACTCTCCAGGTACGTTATTTTGTGCTTCAATTTCTTTCAGTAACATTCTGCCTAACCCTAGGAGATAGTTTGGGTCACCTTCTAGACTTGTTGACATCCCGATATTTGTTGGTCATTTAATAAATCTCATTAGTCATTGCATCGCATGTGTATATCTCTATCTATCTCTCTCTCTCACACACACAATACAAAGGTGATTTAAAAATAAATGTTAGATTTTCTTATTGGAGCATATAATTGCAAATATATTACATTTTTATCTTTCTTGATAAACATGACTGATTTGATTTATATTTAGCTGGTTTTGGAACCTTCACGAACATTTGTTACATGACAGCCTAGCATTACAGATATGTAACTGATTTCTACTTTGCGTTGGTTTCATATTGTGGGATATCTTCTTGCACGTAGTATTTTTACTGTAAATGTTATAATTTGAAATGTAAACTTGGTTCATGAAAACAACCAACTTCAACCTATAATACCCTTATCACTTATCACACATGGATCCACATGCTTATTTCGAACATGAAAATCATTGACATTGTGGGTATAGCAATATGTTTTATCGAATAATTTATGTATTCATATCTAATTTTGTAGAAATGATATTTCGTTATTATATCTCTGATCATGCTTTTTATACATGCTTCTTAGCATTTTATTGATTTAAGGGTTTATTTTATTTTTATGGTTCTCGTGAATCTATCTTCAATTTTATATCTTAGATTCTTAGTTTTGGTTAAAAATTTATATTAATATTTTTTTCACCGTTTTTAAAAATTGTATGAATGTGGATGGGCTGCTAACCATCCGTGGGCAGCCCGAACCAGTGTTTTTAAATCGTGAGGTACCAAAAAAATGGGTGTTTTTTTTATGAGTTGTCCAATTGAAGAATGAAAATAAATCAATAAGAAGGTAATGAAAAGTTCAAGAAAATTGGAGATTGCGGAGGAAATTGAACATTTTCTAAGAATATTTCTTAATTTCTCCCTACAACTTTAAAAATGAAAAAAATGGCCTTCATTTGGCGGCAAGATGAGCTTTTCAGATGAGTGGCCTTAGGTGAGGATTAAGTTGCCAAATACTACTTTGTGAACTGTTTTCTTTTTATGTTTGGGTAACTTAATTATGTTCTTAGTCATGTTGCACCTTTTTCAACTGCCATAACCTGTAATGCACAGGTGCTGCGAAGTTTATATACTGATCAACCCCCCCCCCCCANTGGAGAGGAGGAGCTGTGTTGTGTGTACGTTCCCACCAATCATCTTTATATCGGTGATGTTTTCTTAGTCAACTCTCAGGATGTTATTAGACCAAATTTATCAGTTCGGGAGGGAATCGGTGAGTTCTTCTGTTTATGTCATTATCTAGTTTGACCTGAATTTCAAATGAACTAAAAGCCCCCAATTTCAACCCCCTCACACACACACACACACACACACACAAGTAATAATTTAGGAAATTCAAGGGTTGATCAGGAATTATCTTTCTATCTAAGAGGACATGACTTGTAGCTTTCTAAGAGTAAAAAGGAAACTAATTACTTAAATTGCAGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATACTATCCATACTGGATTCAGATATCCGGCCAATTGATGCTAGAAGACTGACTAGAAGCTGAGACCGAAGATGTAGAATTGCTGGCTGCTAATCAATATACGGTTTTGGGGATGACAATTTAGTTGCTCTGCCTGGCTGGGCTCAGAACCTTTAGTCGGCAAAGCATAACTTATAATAGAAATTTGTTTCTCGTAGTTGAAATTTAATGTCATAAAAAATAGTTGTTGATCCAGTATAGTAGGAAATGGATGTGCATTAGAACTTCTCTTCATTCTAATTCAATCGAGAGTGTTTACTTTCTTCTTCTTGGTGAGTCACATAGTTCTGTTGCGTCAGATGTATATTTGAGACTGTACATATTTTGCAGCGATATATCGATGCACTATGAAACACGTCAACTCAAAGATTTTTTGGATAATCATTTTTTTTTCAATACTCATAACATACATTTCTCATATGATCTTAAAGAAATAACCATATTAGCAGCCTGAAATCTTCGACATTGGGAATAAAATAAAGTCGAAGTTCAGTTTCGTTAATGTATTTTTTGACATATCTTCTTATTGACTTCTAT

mRNA sequence

CCTCTGACTTCAAAGGGTTGCCTTGTTGCCGGTCTACTGTCTTCGGGGCGAAGGTTTTTAAGCTGCAGAACGCTGTGGCTGGGCTTTCCAATAGGGGCTGCCGTTAATGGCCGACGAAAAAGCGGCGATTGCGATCGCCAGCAGAGATAGAGAGCGAGATCTACAGCTTCTAATTCCCGTTGCCGGCTCGCCAAATGACGTTGCTGCCTCTTGTAAGCCGTCATCCTCTTCATCGTCCTCGCAGCAGACTGGACGCGAGACATTTTACAGAGTTTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACCGGATGAAAGTATGTTCAGCAGGGTCTTGGATTTGCAACATCTGTATCGTTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCATTTGGGTTCATTACTTCAACTGTCACTCTCCAGGTGCTGCGAAGTTTATATACTGATCAACCCCCCCCCCCCANTGGAGAGGAGGAGCTGTGTTGTGTGTACGTTCCCACCAATCATCTTTATATCGGTGATGTTTTCTTAGTCAACTCTCAGGATGTTATTAGACCAAATTTATCAGTTCGGGAGGGAATCGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATACTATCCATACTGGATTCAGATATCCGGCCAATTGATGCTAGAAGACTGACTAGAAGCTGAGACCGAAGATGTAGAATTGCTGGCTGCTAATCAATATACGGTTTTGGGGATGACAATTTAGTTGCTCTGCCTGGCTGGGCTCAGAACCTTTAGTCGGCAAAGCATAACTTATAATAGAAATTTGTTTCTCGTAGTTGAAATTTAATGTCATAAAAAATAGTTGTTGATCCAGTATAGTAGGAAATGGATGTGCATTAGAACTTCTCTTCATTCTAATTCAATCGAGAGTGTTTACTTTCTTCTTCTTGGTGAGTCACATAGTTCTGTTGCGTCAGATGTATATTTGAGACTGTACATATTTTGCAGCGATATATCGATGCACTATGAAACACGTCAACTCAAAGATTTTTTGGATAATCATTTTTTTTTCAATACTCATAACATACATTTCTCATATGATCTTAAAGAAATAACCATATTAGCAGCCTGAAATCTTCGACATTGGGAATAAAATAAAGTCGAAGTTCAGTTTCGTTAATGTATTTTTTGACATATCTTCTTATTGACTTCTAT

Coding sequence (CDS)

ATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCATTTGGGTTCATTACTTCAACTGTCACTCTCCAGGTGCTGCGAAGTTTATATACTGATCAACCCCCCCCCCCCANTGGAGAGGAGGAGCTGTGTTGTGTGTACGTTCCCACCAATCATCTTTATATCGGTGATGTTTTCTTAGTCAACTCTCAGGATGTTATTAGACCAAATTTATCAGTTCGGGAGGGAATCGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATACTATCCATACTGGATTCAGATATCCGGCCAATTGATGCTAGAAGACTGACTAGAAGCTGA

Protein sequence

MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS

Homology

[Close]

BLAST of Cp4.1LG18g04180 vs. ExPASy Swiss-Prot
Match: F4IUE7 (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 SV=2)

HSP 1 Score: 237.7 bits (605), Expect = 9.2e-62
Identity = 121/150 (80.67%), Postives = 128/150 (85.33%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRHPR+GEY
Sbjct: 125 MSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEY 184

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTV LQ       + P     EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLS
Sbjct: 185 AFGFITSTVVLQ-------NYPT----EEELCCVYVPTNHLYIGDILLVNSNDVIRPNLS 244

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPID 151
           VREGIEIVVSGGMSMPQILS +D  +  ID
Sbjct: 245 VREGIEIVVSGGMSMPQILSTVDKPLASID 263

[Close]

BLAST of Cp4.1LG18g04180 vs. ExPASy Swiss-Prot
Match: Q8VY49 (Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-61
Identity = 121/149 (81.21%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRHPR+GEY
Sbjct: 115 MSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEY 174

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTV LQ       + P     EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLS
Sbjct: 175 AFGFITSTVVLQ-------NYPT----EEELCCVYVPTNHLYIGDILLVNSNDVIRPNLS 234

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPI 150
           VREGIEIVVSGGMSMPQILS LD  +  I
Sbjct: 235 VREGIEIVVSGGMSMPQILSTLDKPLASI 252

[Close]

BLAST of Cp4.1LG18g04180 vs. ExPASy Swiss-Prot
Match: Q9C8C1 (Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.1e-54
Identity = 106/142 (74.65%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 2   SSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYA 61
           SSWLG++V  LGE FI+RMPFV+HIY+ASKQIS+AISPDQNT AFKEVAIIRHPRIGEYA
Sbjct: 112 SSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYA 171

Query: 62  FGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSV 121
           FGFITS+VTLQ      TD      GEEELC VYVPTNHLYIGDVFLV+S+++IRPNLS+
Sbjct: 172 FGFITSSVTLQ------TDH-----GEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSI 231

Query: 122 REGIEIVVSGGMSMPQILSILD 144
           REGIEI+VS GM+MPQ++S +D
Sbjct: 232 REGIEIIVSVGMTMPQVISHVD 242

[Close]

BLAST of Cp4.1LG18g04180 vs. ExPASy Swiss-Prot
Match: F4IQJ6 (Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 9.2e-54
Identity = 102/145 (70.34%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVL++GEWFIK+MP V +IY+ASKQIS AISPDQ++ AFKEVAIIRHP +GEY
Sbjct: 115 MSSWLGASVLSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEY 174

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTV L+              G EELCCVYVPTNHLY+GD+FL++S+D+IRPNLS
Sbjct: 175 AFGFITSTVILR-----------GRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLS 234

Query: 121 VREGIEIVVSGGMSMPQILSILDSD 146
           VREGIEIV+SGGMS+P +L+ LDS+
Sbjct: 235 VREGIEIVISGGMSIPHMLTTLDSE 248

[Close]

BLAST of Cp4.1LG18g04180 vs. NCBI nr
Match: XP_023516187.1 (protein CONTINUOUS VASCULAR RING 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277 bits (709), Expect = 1.99e-92
Identity = 144/157 (91.72%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY
Sbjct: 76  MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 135

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTVTLQV             GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 136 AFGFITSTVTLQVRYX----------GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 195

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 157
           VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS
Sbjct: 196 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 222

[Close]

BLAST of Cp4.1LG18g04180 vs. NCBI nr
Match: XP_023516186.1 (protein LIKE COV 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277 bits (709), Expect = 9.63e-92
Identity = 144/157 (91.72%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY
Sbjct: 123 MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 182

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTVTLQV             GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 183 AFGFITSTVTLQVRYX----------GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 242

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 157
           VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS
Sbjct: 243 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 269

[Close]

BLAST of Cp4.1LG18g04180 vs. NCBI nr
Match: XP_022961333.1 (protein CONTINUOUS VASCULAR RING 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 274 bits (701), Expect = 3.18e-91
Identity = 142/157 (90.45%), Postives = 142/157 (90.45%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY
Sbjct: 76  MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 135

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTVTLQ              GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 136 AFGFITSTVTLQSYS-----------GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 195

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 157
           VREGIEIVVSGGMSMPQILSILDSDIRPID RRLTRS
Sbjct: 196 VREGIEIVVSGGMSMPQILSILDSDIRPIDGRRLTRS 221

[Close]

BLAST of Cp4.1LG18g04180 vs. NCBI nr
Match: XP_016902924.1 (PREDICTED: protein CONTINUOUS VASCULAR RING 1-like isoform X3 [Cucumis melo])

HSP 1 Score: 275 bits (702), Expect = 3.25e-91
Identity = 142/157 (90.45%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY
Sbjct: 87  MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 146

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTVTLQ              GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 147 AFGFITSTVTLQSYS-----------GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 206

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 157
           VREGIEIVVSGGMSMPQILSILDSDIRPID+RRLTRS
Sbjct: 207 VREGIEIVVSGGMSMPQILSILDSDIRPIDSRRLTRS 232

[Close]

BLAST of Cp4.1LG18g04180 vs. NCBI nr
Match: XP_008462683.1 (PREDICTED: protein LIKE COV 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 275 bits (702), Expect = 1.05e-90
Identity = 142/157 (90.45%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY
Sbjct: 122 MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 181

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTVTLQ              GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 182 AFGFITSTVTLQSYS-----------GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 241

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 157
           VREGIEIVVSGGMSMPQILSILDSDIRPID+RRLTRS
Sbjct: 242 VREGIEIVVSGGMSMPQILSILDSDIRPIDSRRLTRS 267

[Close]

BLAST of Cp4.1LG18g04180 vs. ExPASy TrEMBL
Match: A0A6J1HBH3 (protein CONTINUOUS VASCULAR RING 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461852 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 1.54e-91
Identity = 142/157 (90.45%), Postives = 142/157 (90.45%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY
Sbjct: 76  MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 135

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTVTLQ              GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 136 AFGFITSTVTLQSYS-----------GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 195

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 157
           VREGIEIVVSGGMSMPQILSILDSDIRPID RRLTRS
Sbjct: 196 VREGIEIVVSGGMSMPQILSILDSDIRPIDGRRLTRS 221

[Close]

BLAST of Cp4.1LG18g04180 vs. ExPASy TrEMBL
Match: A0A1S4E3X2 (protein CONTINUOUS VASCULAR RING 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 1.57e-91
Identity = 142/157 (90.45%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY
Sbjct: 87  MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 146

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTVTLQ              GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 147 AFGFITSTVTLQSYS-----------GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 206

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 157
           VREGIEIVVSGGMSMPQILSILDSDIRPID+RRLTRS
Sbjct: 207 VREGIEIVVSGGMSMPQILSILDSDIRPIDSRRLTRS 232

[Close]

BLAST of Cp4.1LG18g04180 vs. ExPASy TrEMBL
Match: A0A1S3CI12 (protein LIKE COV 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 5.06e-91
Identity = 142/157 (90.45%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY
Sbjct: 122 MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 181

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTVTLQ              GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 182 AFGFITSTVTLQSYS-----------GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 241

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 157
           VREGIEIVVSGGMSMPQILSILDSDIRPID+RRLTRS
Sbjct: 242 VREGIEIVVSGGMSMPQILSILDSDIRPIDSRRLTRS 267

[Close]

BLAST of Cp4.1LG18g04180 vs. ExPASy TrEMBL
Match: A0A1S4E3W8 (protein LIKE COV 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 6.81e-91
Identity = 142/157 (90.45%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY
Sbjct: 131 MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 190

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTVTLQ              GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 191 AFGFITSTVTLQSYS-----------GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 250

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 157
           VREGIEIVVSGGMSMPQILSILDSDIRPID+RRLTRS
Sbjct: 251 VREGIEIVVSGGMSMPQILSILDSDIRPIDSRRLTRS 276

[Close]

BLAST of Cp4.1LG18g04180 vs. ExPASy TrEMBL
Match: A0A6J1H9X5 (protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461852 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 7.42e-91
Identity = 142/157 (90.45%), Postives = 142/157 (90.45%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY
Sbjct: 123 MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 182

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTVTLQ              GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 183 AFGFITSTVTLQSYS-----------GEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 242

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPIDARRLTRS 157
           VREGIEIVVSGGMSMPQILSILDSDIRPID RRLTRS
Sbjct: 243 VREGIEIVVSGGMSMPQILSILDSDIRPIDGRRLTRS 268

[Close]

BLAST of Cp4.1LG18g04180 vs. TAIR 10
Match: AT2G20120.1 (Protein of unknown function (DUF502) )

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-62
Identity = 121/150 (80.67%), Postives = 128/150 (85.33%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRHPR+GEY
Sbjct: 125 MSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEY 184

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTV LQ       + P     EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLS
Sbjct: 185 AFGFITSTVVLQ-------NYPT----EEELCCVYVPTNHLYIGDLLLVNSNDVIRPNLS 244

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPID 151
           VREGIEIVVSGGMSMPQILS +D  +  ID
Sbjct: 245 VREGIEIVVSGGMSMPQILSTVDKPLASID 263

[Close]

BLAST of Cp4.1LG18g04180 vs. TAIR 10
Match: AT2G20130.1 (like COV 1 )

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-62
Identity = 121/149 (81.21%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRHPR+GEY
Sbjct: 115 MSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEY 174

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTV LQ       + P     EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLS
Sbjct: 175 AFGFITSTVVLQ-------NYPT----EEELCCVYVPTNHLYIGDILLVNSNDVIRPNLS 234

Query: 121 VREGIEIVVSGGMSMPQILSILDSDIRPI 150
           VREGIEIVVSGGMSMPQILS LD  +  I
Sbjct: 235 VREGIEIVVSGGMSMPQILSTLDKPLASI 252

[Close]

BLAST of Cp4.1LG18g04180 vs. TAIR 10
Match: AT1G43130.1 (like COV 2 )

HSP 1 Score: 212.2 bits (539), Expect = 2.9e-55
Identity = 106/142 (74.65%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 2   SSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYA 61
           SSWLG++V  LGE FI+RMPFV+HIY+ASKQIS+AISPDQNT AFKEVAIIRHPRIGEYA
Sbjct: 112 SSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYA 171

Query: 62  FGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSV 121
           FGFITS+VTLQ      TD      GEEELC VYVPTNHLYIGDVFLV+S+++IRPNLS+
Sbjct: 172 FGFITSSVTLQ------TDH-----GEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSI 231

Query: 122 REGIEIVVSGGMSMPQILSILD 144
           REGIEI+VS GM+MPQ++S +D
Sbjct: 232 REGIEIIVSVGMTMPQVISHVD 242

[Close]

BLAST of Cp4.1LG18g04180 vs. TAIR 10
Match: AT2G18460.1 (like COV 3 )

HSP 1 Score: 211.1 bits (536), Expect = 6.6e-55
Identity = 102/145 (70.34%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 1   MSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEY 60
           MSSWLGASVL++GEWFIK+MP V +IY+ASKQIS AISPDQ++ AFKEVAIIRHP +GEY
Sbjct: 115 MSSWLGASVLSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEY 174

Query: 61  AFGFITSTVTLQVLRSLYTDQPPPPXGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 120
           AFGFITSTV L+              G EELCCVYVPTNHLY+GD+FL++S+D+IRPNLS
Sbjct: 175 AFGFITSTVILR-----------GRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLS 234

Query: 121 VREGIEIVVSGGMSMPQILSILDSD 146
           VREGIEIV+SGGMS+P +L+ LDS+
Sbjct: 235 VREGIEIVISGGMSIPHMLTTLDSE 248

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g04180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IUE7	9.2e-62	80.67	Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 ...	[more]
Q8VY49	2.1e-61	81.21	Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1	[more]
Q9C8C1	4.1e-54	74.65	Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1	[more]
F4IQJ6	9.2e-54	70.34	Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1	[more]

BLAST of Cp4.1LG18g04180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516187.1	1.99e-92	91.72	protein CONTINUOUS VASCULAR RING 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023516186.1	9.63e-92	91.72	protein LIKE COV 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022961333.1	3.18e-91	90.45	protein CONTINUOUS VASCULAR RING 1-like isoform X2 [Cucurbita moschata]	[more]
XP_016902924.1	3.25e-91	90.45	PREDICTED: protein CONTINUOUS VASCULAR RING 1-like isoform X3 [Cucumis melo]	[more]
XP_008462683.1	1.05e-90	90.45	PREDICTED: protein LIKE COV 1-like isoform X2 [Cucumis melo]	[more]

BLAST of Cp4.1LG18g04180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBH3	1.54e-91	90.45	protein CONTINUOUS VASCULAR RING 1-like isoform X2 OS=Cucurbita moschata OX=3662...	[more]
A0A1S4E3X2	1.57e-91	90.45	protein CONTINUOUS VASCULAR RING 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A1S3CI12	5.06e-91	90.45	protein LIKE COV 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 ...	[more]
A0A1S4E3W8	6.81e-91	90.45	protein LIKE COV 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 ...	[more]
A0A6J1H9X5	7.42e-91	90.45	protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461852...	[more]

BLAST of Cp4.1LG18g04180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20120.1	1.1e-62	80.67	Protein of unknown function (DUF502)	[more]
AT2G20130.1	1.5e-62	81.21	like COV 1	[more]
AT1G43130.1	2.9e-55	74.65	like COV 2	[more]
AT2G18460.1	6.6e-55	70.34	like COV 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007462	Protein of unknown function DUF502	PFAM	PF04367	DUF502	coord: 1..99 e-value: 1.0E-22 score: 80.0
None	No IPR available	PANTHER	PTHR31876	COV-LIKE PROTEIN 1	coord: 1..145
None	No IPR available	PANTHER	PTHR31876:SF19	PROTEIN CONTINUOUS VASCULAR RING 1-RELATED	coord: 1..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g04180.1	Cp4.1LG18g04180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane