Cp4.1LG18g03880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g03880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Meiotic nuclear division protein 1 homolog
Location	Cp4.1LG18: 5121005 .. 5122636 (+)
RNA-Seq Expression	Cp4.1LG18g03880
Synteny	Cp4.1LG18g03880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCAGATCTTTTACGATTCTCAAGACTTTTTCCTTGTGAGCATACTTGTACTTCTATACTTCTATTCCTTTTTCTTCATTATTTACAATAAGAAGCTTCCTTCCTTTTTCTCGTTTCAGCTTAAGGAGCTTGAAAAATTGGGTCCCAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGACGTTGTGCAAAGTTTAGTGGACGATGACCTGGTTTCAAAAGAGAAGATTGGAACTTCAGTGAGTATAATTTTTGAGATGAAACTTCCAGTCATCCATTATTGTGTTTATCCTATTTGCACCATGACTTATTCTTTGCGTATGGGTCATAGCCTTCGGACATGATTGTCTCTCGTGCATTATGAATCTGTTTTTTCAATTTGCTATGTATTTATGTATGGTTGTAAACTTCAGGTCTATTTTTGGAGTCTACCAAGCTGTGCTGGTAATCAGGTGAAGTTTATATCCTTTGTATCATGATTTGTCTAACTCACTTCAAAGGCTTTATATTTATGATGTGTCCAAGCTCGCTCTAAATATTAAATCATCTGAATATTTGATTGAATTTGTACCTCCAAAATATCTCATGTCCCTCTTCGTACCAGCTGCGGAATGTGTATCGTAAACTTGAATCTGATCTCCAAACCAGTAAGAATAGACTGGAAGAACTTACTGAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGTGAGTGATTATATTTTAAGCAAAAGGTAATTTATGAAAAATATTTGCCCTTCTATCATGAATGCTTTCTTCATGCCAGGAAGAACGAGAGGAAGCCCTAGCTCAATTAAAAGCCATTGAACTGAAGCATAAAGAGCTAAAGGTTTTGCTTGTATTCTGGATTTCTTTCTCCTTTTTATTGGAAAAAGAGAAATCGATCACGATGATCTTTTAGTTTTCACGCTTCTTTGACAATCTAGTCATTCCCAGGATGAGATGGTACAATATGCAGATAATGATCCAGCAGCCTTTGAAGCAATGAGTTGAGTTTCTGTTTTTTACCATTTTTTAGATTTTTACTATAGAAAATGGGTTTCAGCTGTTTAATTCTTTCTTGATATCGCTGTGTGCTAAACATGAACATCTTATGGGACAGAAAATGCAATTGAAGATGCTCATGCTGCAGCCAACCGATGGACAGGTATGCATTCTGACCATAAGCTGCCAACTAGTTTTCTATGTCTTTTTTCTCTCGTGCCCATTTGAAATTTCTTTCAAAACTCTATTTATTAACACGCAGACAACATTTTCACTTTGCGACAATGGTGTTCAAACAACTTTCCACAGGCCAAAGAACAACTAGAGAACCTGTATAAAGAGGTAAACCGCACTTCTTTGGTAAAATTGCCCTCTGCAAGAACTAGAGATGTGCTCAAATATAGCACGCACGTCAAATTCCTCATCTTCAACTTTTCGTAACGTTGCTTTTCACAGTTTTGGAAAGATAAGAAACAAACCTATACGTCCCAAGAAAATGGGTCTCAATATCTCTAGTTAAAAATTCTGAGCTATTGGCTGTGTGTAAACGCAGGTTGGCATCACGGATGATTTTGATTATTTGGAGTTGTCACCAGCTCCTCTGAGCTCAGTTGTCGATTAA

mRNA sequence

ATGCTTCAGATCTTTTACGATTCTCAAGACTTTTTCCTTGTGAGCATACTTGTACTTCTATACTTCTATTCCTTTTTCTTCATTATTTACAATAAGAAGCTTCCTTCCTTTTTCTCGTTTCAGCTTAAGGAGCTTGAAAAATTGGGTCCCAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGACGTTGTGCAAAGTTTAGTGGACGATGACCTGGTTTCAAAAGAGAAGATTGGAACTTCAGTCTATTTTTGGAGTCTACCAAGCTGTGCTGGTAATCAGCTGCGGAATGTGTATCGTAAACTTGAATCTGATCTCCAAACCAGTAAGAATAGACTGGAAGAACTTACTGAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGAAGAACGAGAGGAAGCCCTAGCTCAATTAAAAGCCATTGAACTGAAGCATAAAGAGCTAAAGGATGAGATGGTACAATATGCAGATAATGATCCAGCAGCCTTTGAAGCAATGAAAAATGCAATTGAAGATGCTCATGCTGCAGCCAACCGATGGACAGACAACATTTTCACTTTGCGACAATGGTGTTCAAACAACTTTCCACAGGCCAAAGAACAACTAGAGAACCTGTATAAAGAGGTTGGCATCACGGATGATTTTGATTATTTGGAGTTGTCACCAGCTCCTCTGAGCTCAGTTGTCGATTAA

Coding sequence (CDS)

ATGCTTCAGATCTTTTACGATTCTCAAGACTTTTTCCTTGTGAGCATACTTGTACTTCTATACTTCTATTCCTTTTTCTTCATTATTTACAATAAGAAGCTTCCTTCCTTTTTCTCGTTTCAGCTTAAGGAGCTTGAAAAATTGGGTCCCAGGAAAGGTGTGATTTCTCAGTCAGTGAAAGACGTTGTGCAAAGTTTAGTGGACGATGACCTGGTTTCAAAAGAGAAGATTGGAACTTCAGTCTATTTTTGGAGTCTACCAAGCTGTGCTGGTAATCAGCTGCGGAATGTGTATCGTAAACTTGAATCTGATCTCCAAACCAGTAAGAATAGACTGGAAGAACTTACTGAGCAGAGTAATGCATTAAAGAAGGGAAGAGAGGAATCTGAAGAACGAGAGGAAGCCCTAGCTCAATTAAAAGCCATTGAACTGAAGCATAAAGAGCTAAAGGATGAGATGGTACAATATGCAGATAATGATCCAGCAGCCTTTGAAGCAATGAAAAATGCAATTGAAGATGCTCATGCTGCAGCCAACCGATGGACAGACAACATTTTCACTTTGCGACAATGGTGTTCAAACAACTTTCCACAGGCCAAAGAACAACTAGAGAACCTGTATAAAGAGGTTGGCATCACGGATGATTTTGATTATTTGGAGTTGTCACCAGCTCCTCTGAGCTCAGTTGTCGATTAA

Protein sequence

MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANRWTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD

Homology

[Close]

BLAST of Cp4.1LG18g03880 vs. ExPASy Swiss-Prot
Match: Q8GYD2 (Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=MND1 PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 3.8e-80
Identity = 160/228 (70.18%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFY+SQDFFL                            LKELEK+GP+KGVISQSVK
Sbjct: 16  MLQIFYESQDFFL----------------------------LKELEKMGPKKGVISQSVK 75

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DV+QSLVDDDLV+K+KIG S+YFWSLPSCAGNQLR+V +KLESDLQ S  RL EL +Q  
Sbjct: 76  DVIQSLVDDDLVAKDKIGISIYFWSLPSCAGNQLRSVRQKLESDLQGSNKRLAELVDQCE 135

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
           ALKKGREESEER EAL QLK IE KHK+LK+EMVQ+ADNDPA  EA +NAIE AH +ANR
Sbjct: 136 ALKKGREESEERTEALTQLKDIEKKHKDLKNEMVQFADNDPATLEAKRNAIEVAHQSANR 195

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSS 229
           WTDNIFTLRQWCSNNFPQAKEQLE+LY E GIT+DFDY+ELS  PLSS
Sbjct: 196 WTDNIFTLRQWCSNNFPQAKEQLEHLYTEAGITEDFDYIELSSFPLSS 215

[Close]

BLAST of Cp4.1LG18g03880 vs. ExPASy Swiss-Prot
Match: Q5XGY9 (Meiotic nuclear division protein 1 homolog OS=Xenopus laevis OX=8355 GN=mnd1 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.9e-29
Identity = 70/182 (38.46%), Postives = 112/182 (61.54%), Query Frame = 0


Query: 40  FQLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVY 99
           FQLK+LEK+ P+ KG+ S SVK+++QSLVDD +V  E+IGTS YFW+ PS A +  +   
Sbjct: 27  FQLKDLEKIAPKEKGITSMSVKEILQSLVDDGMVDSERIGTSNYFWAFPSKALHARKRKL 86

Query: 100 RKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKELKDEMVQYAD 159
             LE+     K + E L +  +  K GR+++EER + + +L ++  + +EL  ++ +Y +
Sbjct: 87  ETLEAQFTEVKQKKESLQQCVDKAKVGRQDTEERSKLVEELASLRHRKEELCADLEKYKE 146

Query: 160 NDPAAFEAMKNAIEDAHAAANRWTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDY 219
            DP   E ++ + + A  A NRWTDNIF ++ W    F   + Q++   K  GI +DFDY
Sbjct: 147 CDPDVVEEIRQSNKVAKDAVNRWTDNIFAVKSWAKKKFGFEERQID---KNFGIPEDFDY 205

Query: 220 LE 221
           ++
Sbjct: 207 ID 205

[Close]

BLAST of Cp4.1LG18g03880 vs. ExPASy Swiss-Prot
Match: Q9BWT6 (Meiotic nuclear division protein 1 homolog OS=Homo sapiens OX=9606 GN=MND1 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28
Identity = 72/182 (39.56%), Postives = 110/182 (60.44%), Query Frame = 0


Query: 40  FQLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVY 99
           FQLK+LEK+ P+ KG+ + SVK+V+QSLVDD +V  E+IGTS Y+W+ PS A +  ++  
Sbjct: 27  FQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMVDCERIGTSNYYWAFPSKALHARKHKL 86

Query: 100 RKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKELKDEMVQYAD 159
             LES L     +   L +     K GR E+EER     +L ++  + ++LK E+ +Y D
Sbjct: 87  EVLESQLSEGSQKHASLQKSIEKAKIGRCETEERTRLAKELSSLRDQREQLKAEVEKYKD 146

Query: 160 NDPAAFEAMKNAIEDAHAAANRWTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDY 219
            DP   E ++ A + A  AANRWTDNIF ++ W    F   + +++  +   GI +DFDY
Sbjct: 147 CDPQVVEEIRQANKVAKEAANRWTDNIFAIKSWAKRKFGFEENKIDRTF---GIPEDFDY 205

Query: 220 LE 221
           ++
Sbjct: 207 ID 205

[Close]

BLAST of Cp4.1LG18g03880 vs. ExPASy Swiss-Prot
Match: Q32L19 (Meiotic nuclear division protein 1 homolog OS=Bos taurus OX=9913 GN=MND1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.6e-28
Identity = 70/182 (38.46%), Postives = 109/182 (59.89%), Query Frame = 0


Query: 40  FQLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVY 99
           FQLK++EK+ P+ KG+ + SVK+V+QSLVDD +V  E+IGTS Y+W+ PS A +  +   
Sbjct: 27  FQLKDMEKIAPKEKGITTMSVKEVLQSLVDDGMVDCERIGTSNYYWAFPSKALHARKRKL 86

Query: 100 RKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKELKDEMVQYAD 159
             L+S L     +   L +     K GR E+EER     +L ++  + ++LK E+ +Y +
Sbjct: 87  EVLDSQLSEGNQKYANLQKSIEKAKVGRHETEERTMLAKELSSLRDQREQLKAEVEKYRE 146

Query: 160 NDPAAFEAMKNAIEDAHAAANRWTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDY 219
            DP   E ++ A + A  AANRWTDNIF ++ W    F   + +++   K  GI +DFDY
Sbjct: 147 CDPQVVEEIRQANQVAKEAANRWTDNIFAIKSWAKRKFGFEENKID---KNFGIPEDFDY 205

Query: 220 LE 221
           ++
Sbjct: 207 ID 205

[Close]

BLAST of Cp4.1LG18g03880 vs. ExPASy Swiss-Prot
Match: Q8K396 (Meiotic nuclear division protein 1 homolog OS=Mus musculus OX=10090 GN=Mnd1 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.4e-28
Identity = 71/182 (39.01%), Postives = 109/182 (59.89%), Query Frame = 0


Query: 40  FQLKELEKLGPR-KGVISQSVKDVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVY 99
           FQLK+LEKL P+ KG+ + SVK+V+QSLVDD +V  E+IGTS Y+W+ PS A +  +   
Sbjct: 27  FQLKDLEKLAPKEKGITAMSVKEVLQSLVDDGMVDCERIGTSNYYWAFPSKALHARKRKL 86

Query: 100 RKLESDLQTSKNRLEELTEQSNALKKGREESEEREEALAQLKAIELKHKELKDEMVQYAD 159
             L S L     +  +L +     + GR+E+EER     +L +   + ++LK E+ +Y +
Sbjct: 87  EALNSQLSEGSQKHADLQKSIEKARVGRQETEERAMLAKELSSFRDQRQQLKAEVEKYRE 146

Query: 160 NDPAAFEAMKNAIEDAHAAANRWTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDY 219
            DP   E ++ A + A  AANRWTDNIF ++ W    F   + +++   K  GI +DFDY
Sbjct: 147 CDPQVVEEIREANKVAKEAANRWTDNIFAIKSWAKRKFGFEESKID---KNFGIPEDFDY 205

Query: 220 LE 221
           ++
Sbjct: 207 ID 205

[Close]

BLAST of Cp4.1LG18g03880 vs. NCBI nr
Match: XP_022961005.1 (meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita moschata] >XP_023516621.1 meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378 bits (970), Expect = 5.96e-131
Identity = 203/231 (87.88%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFYDSQDFFL                            LKELEKLGPRKGVISQSVK
Sbjct: 16  MLQIFYDSQDFFL----------------------------LKELEKLGPRKGVISQSVK 75

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN
Sbjct: 76  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 135

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
           ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR
Sbjct: 136 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 195

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 231
           WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD
Sbjct: 196 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 218

[Close]

BLAST of Cp4.1LG18g03880 vs. NCBI nr
Match: XP_022987869.1 (meiotic nuclear division protein 1 homolog isoform X3 [Cucurbita maxima])

HSP 1 Score: 376 bits (965), Expect = 2.02e-130
Identity = 202/231 (87.45%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFYDSQDFFL                            LKELEKLGPRKGVISQSVK
Sbjct: 1   MLQIFYDSQDFFL----------------------------LKELEKLGPRKGVISQSVK 60

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNV+RKLESDLQTSKNRLEELTEQSN
Sbjct: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVHRKLESDLQTSKNRLEELTEQSN 120

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
           ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR
Sbjct: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 231
           WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD
Sbjct: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 203

[Close]

BLAST of Cp4.1LG18g03880 vs. NCBI nr
Match: XP_022987867.1 (meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 376 bits (965), Expect = 3.44e-130
Identity = 202/231 (87.45%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFYDSQDFFL                            LKELEKLGPRKGVISQSVK
Sbjct: 16  MLQIFYDSQDFFL----------------------------LKELEKLGPRKGVISQSVK 75

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNV+RKLESDLQTSKNRLEELTEQSN
Sbjct: 76  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVHRKLESDLQTSKNRLEELTEQSN 135

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
           ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR
Sbjct: 136 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 195

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 231
           WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD
Sbjct: 196 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 218

[Close]

BLAST of Cp4.1LG18g03880 vs. NCBI nr
Match: KAG6589969.1 (Meiotic nuclear division protein 1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378 bits (970), Expect = 2.08e-129
Identity = 203/231 (87.88%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFYDSQDFFL                            LKELEKLGPRKGVISQSVK
Sbjct: 117 MLQIFYDSQDFFL----------------------------LKELEKLGPRKGVISQSVK 176

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN
Sbjct: 177 DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 236

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
           ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR
Sbjct: 237 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 296

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 231
           WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD
Sbjct: 297 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 319

[Close]

BLAST of Cp4.1LG18g03880 vs. NCBI nr
Match: XP_038880240.1 (meiotic nuclear division protein 1 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 363 bits (933), Expect = 1.52e-125
Identity = 194/231 (83.98%), Postives = 200/231 (86.58%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFY+SQDFFL                            LKELEKLGPRKGVISQSVK
Sbjct: 1   MLQIFYESQDFFL----------------------------LKELEKLGPRKGVISQSVK 60

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNV RKLESDLQT KNRLEELTEQSN
Sbjct: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVCRKLESDLQTCKNRLEELTEQSN 120

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
            LKKGREESEEREEALA+LKAIELKHKELKDEM+QYADNDPAAFEAMKNAI+DAHAAANR
Sbjct: 121 ELKKGREESEEREEALAKLKAIELKHKELKDEMLQYADNDPAAFEAMKNAIDDAHAAANR 180

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 231
           WTDNIFTLRQWCSNNFPQAKEQLENLYKEVG+TDDFDYLELSPAPLSSV+D
Sbjct: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGMTDDFDYLELSPAPLSSVID 203

[Close]

BLAST of Cp4.1LG18g03880 vs. ExPASy TrEMBL
Match: A0A6J1HAQ5 (Meiotic nuclear division protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461640 PE=3 SV=1)

HSP 1 Score: 378 bits (970), Expect = 2.88e-131
Identity = 203/231 (87.88%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFYDSQDFFL                            LKELEKLGPRKGVISQSVK
Sbjct: 16  MLQIFYDSQDFFL----------------------------LKELEKLGPRKGVISQSVK 75

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN
Sbjct: 76  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 135

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
           ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR
Sbjct: 136 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 195

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 231
           WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD
Sbjct: 196 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 218

[Close]

BLAST of Cp4.1LG18g03880 vs. ExPASy TrEMBL
Match: A0A6J1JK16 (Meiotic nuclear division protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485279 PE=3 SV=1)

HSP 1 Score: 376 bits (965), Expect = 9.77e-131
Identity = 202/231 (87.45%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFYDSQDFFL                            LKELEKLGPRKGVISQSVK
Sbjct: 1   MLQIFYDSQDFFL----------------------------LKELEKLGPRKGVISQSVK 60

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNV+RKLESDLQTSKNRLEELTEQSN
Sbjct: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVHRKLESDLQTSKNRLEELTEQSN 120

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
           ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR
Sbjct: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 231
           WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD
Sbjct: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 203

[Close]

BLAST of Cp4.1LG18g03880 vs. ExPASy TrEMBL
Match: A0A6J1JBJ2 (Meiotic nuclear division protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485279 PE=3 SV=1)

HSP 1 Score: 376 bits (965), Expect = 1.67e-130
Identity = 202/231 (87.45%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFYDSQDFFL                            LKELEKLGPRKGVISQSVK
Sbjct: 16  MLQIFYDSQDFFL----------------------------LKELEKLGPRKGVISQSVK 75

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNV+RKLESDLQTSKNRLEELTEQSN
Sbjct: 76  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVHRKLESDLQTSKNRLEELTEQSN 135

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
           ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR
Sbjct: 136 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 195

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 231
           WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD
Sbjct: 196 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 218

[Close]

BLAST of Cp4.1LG18g03880 vs. ExPASy TrEMBL
Match: A0A5D3CDS1 (Meiotic nuclear division protein 1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002700 PE=3 SV=1)

HSP 1 Score: 358 bits (920), Expect = 7.03e-124
Identity = 190/231 (82.25%), Postives = 198/231 (85.71%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFY+SQDFFL                            LKELEKLGPRKGVISQSVK
Sbjct: 1   MLQIFYESQDFFL----------------------------LKELEKLGPRKGVISQSVK 60

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQ SKNRLEELTEQ  
Sbjct: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQNSKNRLEELTEQCK 120

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
            LKKGREESEEREEALA+LKAIELKHKELKDE++QYADNDPAAFEAMKNAI+DAHAAANR
Sbjct: 121 QLKKGREESEEREEALAELKAIELKHKELKDEVLQYADNDPAAFEAMKNAIDDAHAAANR 180

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 231
           WTDNIFTLRQWCSNNFPQAKEQLENLYKEVG+T+DFDYLELSP PLSSV+D
Sbjct: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGMTEDFDYLELSPTPLSSVID 203

[Close]

BLAST of Cp4.1LG18g03880 vs. ExPASy TrEMBL
Match: A0A1S4DYD0 (Meiotic nuclear division protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492285 PE=3 SV=1)

HSP 1 Score: 358 bits (920), Expect = 7.03e-124
Identity = 190/231 (82.25%), Postives = 198/231 (85.71%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFY+SQDFFL                            LKELEKLGPRKGVISQSVK
Sbjct: 1   MLQIFYESQDFFL----------------------------LKELEKLGPRKGVISQSVK 60

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQ SKNRLEELTEQ  
Sbjct: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQNSKNRLEELTEQCK 120

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
            LKKGREESEEREEALA+LKAIELKHKELKDE++QYADNDPAAFEAMKNAI+DAHAAANR
Sbjct: 121 QLKKGREESEEREEALAELKAIELKHKELKDEVLQYADNDPAAFEAMKNAIDDAHAAANR 180

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSSVVD 231
           WTDNIFTLRQWCSNNFPQAKEQLENLYKEVG+T+DFDYLELSP PLSSV+D
Sbjct: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGMTEDFDYLELSPTPLSSVID 203

[Close]

BLAST of Cp4.1LG18g03880 vs. TAIR 10
Match: AT4G29170.1 (Mnd1 family protein )

HSP 1 Score: 299.3 bits (765), Expect = 2.7e-81
Identity = 160/228 (70.18%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFY+SQDFFL                            LKELEK+GP+KGVISQSVK
Sbjct: 16  MLQIFYESQDFFL----------------------------LKELEKMGPKKGVISQSVK 75

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DV+QSLVDDDLV+K+KIG S+YFWSLPSCAGNQLR+V +KLESDLQ S  RL EL +Q  
Sbjct: 76  DVIQSLVDDDLVAKDKIGISIYFWSLPSCAGNQLRSVRQKLESDLQGSNKRLAELVDQCE 135

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
           ALKKGREESEER EAL QLK IE KHK+LK+EMVQ+ADNDPA  EA +NAIE AH +ANR
Sbjct: 136 ALKKGREESEERTEALTQLKDIEKKHKDLKNEMVQFADNDPATLEAKRNAIEVAHQSANR 195

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSS 229
           WTDNIFTLRQWCSNNFPQAKEQLE+LY E GIT+DFDY+ELS  PLSS
Sbjct: 196 WTDNIFTLRQWCSNNFPQAKEQLEHLYTEAGITEDFDYIELSSFPLSS 215

[Close]

BLAST of Cp4.1LG18g03880 vs. TAIR 10
Match: AT4G29170.2 (Mnd1 family protein )

HSP 1 Score: 299.3 bits (765), Expect = 2.7e-81
Identity = 160/228 (70.18%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 1   MLQIFYDSQDFFLVSILVLLYFYSFFFIIYNKKLPSFFSFQLKELEKLGPRKGVISQSVK 60
           MLQIFY+SQDFFL                            LKELEK+GP+KGVISQSVK
Sbjct: 1   MLQIFYESQDFFL----------------------------LKELEKMGPKKGVISQSVK 60

Query: 61  DVVQSLVDDDLVSKEKIGTSVYFWSLPSCAGNQLRNVYRKLESDLQTSKNRLEELTEQSN 120
           DV+QSLVDDDLV+K+KIG S+YFWSLPSCAGNQLR+V +KLESDLQ S  RL EL +Q  
Sbjct: 61  DVIQSLVDDDLVAKDKIGISIYFWSLPSCAGNQLRSVRQKLESDLQGSNKRLAELVDQCE 120

Query: 121 ALKKGREESEEREEALAQLKAIELKHKELKDEMVQYADNDPAAFEAMKNAIEDAHAAANR 180
           ALKKGREESEER EAL QLK IE KHK+LK+EMVQ+ADNDPA  EA +NAIE AH +ANR
Sbjct: 121 ALKKGREESEERTEALTQLKDIEKKHKDLKNEMVQFADNDPATLEAKRNAIEVAHQSANR 180

Query: 181 WTDNIFTLRQWCSNNFPQAKEQLENLYKEVGITDDFDYLELSPAPLSS 229
           WTDNIFTLRQWCSNNFPQAKEQLE+LY E GIT+DFDY+ELS  PLSS
Sbjct: 181 WTDNIFTLRQWCSNNFPQAKEQLEHLYTEAGITEDFDYIELSSFPLSS 200

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g03880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYD2	3.8e-80	70.18	Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=MN...	[more]
Q5XGY9	8.9e-29	38.46	Meiotic nuclear division protein 1 homolog OS=Xenopus laevis OX=8355 GN=mnd1 PE=...	[more]
Q9BWT6	1.5e-28	39.56	Meiotic nuclear division protein 1 homolog OS=Homo sapiens OX=9606 GN=MND1 PE=1 ...	[more]
Q32L19	2.6e-28	38.46	Meiotic nuclear division protein 1 homolog OS=Bos taurus OX=9913 GN=MND1 PE=2 SV...	[more]
Q8K396	3.4e-28	39.01	Meiotic nuclear division protein 1 homolog OS=Mus musculus OX=10090 GN=Mnd1 PE=1...	[more]

BLAST of Cp4.1LG18g03880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961005.1	5.96e-131	87.88	meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita moschata] >XP_0...	[more]
XP_022987869.1	2.02e-130	87.45	meiotic nuclear division protein 1 homolog isoform X3 [Cucurbita maxima]	[more]
XP_022987867.1	3.44e-130	87.45	meiotic nuclear division protein 1 homolog isoform X1 [Cucurbita maxima]	[more]
KAG6589969.1	2.08e-129	87.88	Meiotic nuclear division protein 1-like protein, partial [Cucurbita argyrosperma...	[more]
XP_038880240.1	1.52e-125	83.98	meiotic nuclear division protein 1 homolog isoform X2 [Benincasa hispida]	[more]

BLAST of Cp4.1LG18g03880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAQ5	2.88e-131	87.88	Meiotic nuclear division protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JK16	9.77e-131	87.45	Meiotic nuclear division protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1JBJ2	1.67e-130	87.45	Meiotic nuclear division protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5D3CDS1	7.03e-124	82.25	Meiotic nuclear division protein 1 homolog OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S4DYD0	7.03e-124	82.25	Meiotic nuclear division protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]

BLAST of Cp4.1LG18g03880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29170.1	2.7e-81	70.18	Mnd1 family protein	[more]
AT4G29170.2	2.7e-81	70.18	Mnd1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 98..159
None	No IPR available	PANTHER	PTHR31398	MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG	coord: 1..221
IPR040453	Mnd1, HTH domain	PFAM	PF03962	Mnd1	coord: 40..87 e-value: 2.6E-21 score: 75.6
IPR005647	Meiotic nuclear division protein 1	PIRSF	PIRSF026991	MND1	coord: 32..223 e-value: 1.0E-70 score: 235.7 coord: 1..16 e-value: 17.0 score: 2.9
IPR040661	Leucine zipper with capping helix domain	PFAM	PF18517	LZ3wCH	coord: 163..219 e-value: 1.5E-22 score: 79.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g03880.1	Cp4.1LG18g03880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0009553	embryo sac development
biological_process	GO:0009555	pollen development
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0010212	response to ionizing radiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003690	double-stranded DNA binding