Cp4.1LG18g03130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGGAAGACAAAGTGCAAGTGGAATAACTCCCAGAGCCCTCTCTCTTTCTATTGGCTAAACTAAACTAACAGTGCGTGAACTATTTGTTGTGATTTGAAACAAGCAACCACAACTTAAAGCAATTAGTATTCTTTTTCAAACCTTGAATATGAGAAGCAGTCAATCATTTGCCAAACCCTGTTGAAAACATAGCCAGGCTGGCTGTTTAGAGCCTCATAAATTGCAGGAAGACGAACGAATAATCATCGTTTTGCTACAATTGGAAAGAAGATGATTCCCCTAGTTAGCAAATTCTACTGTTCGTCTTCCGAGGTTGTGTTTGTCGTTAGGACGAGACCACACGTCATTAATGGAGGAGGTTTTGTTGTGACAGATTGTAATCAGAAAGTTGTTTTCAGTGTTGATGGGTGTGGGATTCTGGGAAAAGAAGAGGAGCTGGTTGTGAGGGATGAGAAGAGGGATGCTTTGCTTTTACTCCGTGGGAAGGTAATATCCAATTACTCTACTCATTCCCTAAACAAGTCTTTTTGGACGATTCAGAACAGTGTTCTAAGTGGAATGTGGATGTTATACTGTGAGTATGTGTTGAAAATCTTCATCTTATTGTGTTTCAGGGAGGGATTTTTGAGGCTCTAAGCTTTCATAAGATATGGAAAGCTTACAAATATGACTTCCAAGGATCTAAAAAGCTGGTTTTCAGCTTGAGAAGACCCAAGTCATGTCTTCCTGTGAAAAACGATGTTGGAATCAGAATAACAACAAAACCAAAGGTTAGCAGAAAAGATTGGGACTTCGAGGTCAGTGGATATTTCCCAGATAGAAGATGCAGCATCATTGATTCTCAAGGCAATGCAGTAGCTCAGGTGAGATTATATTCTCTACTATGGAATAGAAAATATACTATAAACTACAGATTACTATTTACAAACCATATACTAAGCATGCATTGGCTGAAAATTTATTCTAAAGAAGCAAAAAGTTAGCCTTCGTTATGGGGATGGTAGGTGGGTTGTAATAGCCCAAGCCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGACTTTCACTTCAAGGGCTTCCCCTGAAAGTTTTAAAACGCGTCACTAGGGAGAGGTTTCCACACCCTTATAATGAGTGCTTTGTTCCCTTCTCCAACCAATGTGGGACCTCCTGATCCACCTCCCTTGGGGACCAACGTCCTCTCTAACACACCATCTAGTGTCTGACACTGACACCATTTGTAACAACCCAATCCTACCGCTAGAAGATATTGTTCTCTTTGGGTTTTTTCCTTCAAGGGCTTTCCCTCACGGTTTTAAAACGTGTCCACTAGGGAGAGGTTTCCACACTCTTAGAAGGAACGTTTCGTTCCTCTTTCCAACCAATGTGGGACCTCAAAATCCACCCCTCTTGGTGCCCAGCGTCCTCGCTAGCAGACTGCACAATGTCTGGATCTGATATCATTTGTAATAGCCCAAGCCTACCACAAGCAGATATTGTCCTCTTTGGACTTTCCCTCCAAGGACTTCCCCCTCAAGGTTTTAAAATGCGTCCACCAGGGAGAGGTTTCTACACTCTTATAAGGAATGTTTCGTTCCCCTCTCCAACCGATGTAGGACCTCACATGGTTACTGAAAAATAGGAACAGGTACCTGTTTGTCGAAGTTGTAGCTTGCTATCTACCAAATGAACCTTCACTGCAACAGCCCACATATGGCTTAATACTGTCCCATACAGCCTAAATATAAATGAAGAGAGTAGCTGTACTTGATTTTGGTCCTGTTCCCTCAGTAAAGCTAGAGTTACATGTTAGAGATGTATATTAATCATGCTTCGAATAACTGCAGATCGGAACGATTAAAAAGACTGGAGAGCAGTTGAGCAAGGATATCTATTATGTTTCAATAAAACCTGGAGTCGATCAGGCCTTTATTGTTGGAGTTGTTGCCATTCTCGACAACATCTATGGTGAATCAACCAGCTGCTGAATTTTTAAGAAAGGGGACGATGGCAATTGCTCGTCGCCCTTCCATCGAATTGTGATTGAACTGTAGATTTGTGGCGGGACTCCATTTCGTTCGTCACCATGAACTGGATCTGCATATTTTGTTAACAGCAATGTATTCTTTTAGCTTTTATAGCATTTGTCCTGTAAATGTAATTGAACTATTTACCTTCTCCACTGCCTTCTGATCTCCCATTTGCCTTGCTTATCGTTGCTGCCATATAAGAGTAGATGAAGCAGGGCAAAGGCAACAGTAGCTGAATATATCATATCAACTTTTAATAATATAAACA AATGGAAGACAAAGTGCAAGTGGAATAACTCCCAGAGCCCTCTCTCTTTCTATTGGCTAAACTAAACTAACAGTGCGTGAACTATTTGTTGTGATTTGAAACAAGCAACCACAACTTAAAGCAATTAGTATTCTTTTTCAAACCTTGAATATGAGAAGCAGTCAATCATTTGCCAAACCCTGTTGAAAACATAGCCAGGCTGGCTGTTTAGAGCCTCATAAATTGCAGGAAGACGAACGAATAATCATCGTTTTGCTACAATTGGAAAGAAGATGATTCCCCTAGTTAGCAAATTCTACTGTTCGTCTTCCGAGGTTGTGTTTGTCGTTAGGACGAGACCACACGTCATTAATGGAGGAGGTTTTGTTGTGACAGATTGTAATCAGAAAGTTGTTTTCAGTGTTGATGGGTGTGGGATTCTGGGAAAAGAAGAGGAGCTGGTTGTGAGGGATGAGAAGAGGGATGCTTTGCTTTTACTCCGTGGGAAGGGAGGGATTTTTGAGGCTCTAAGCTTTCATAAGATATGGAAAGCTTACAAATATGACTTCCAAGGATCTAAAAAGCTGGTTTTCAGCTTGAGAAGACCCAAGTCATGTCTTCCTGTGAAAAACGATGTTGGAATCAGAATAACAACAAAACCAAAGGTTAGCAGAAAAGATTGGGACTTCGAGGTCAGTGGATATTTCCCAGATAGAAGATGCAGCATCATTGATTCTCAAGGCAATGCAGTAGCTCAGATCGGAACGATTAAAAAGACTGGAGAGCAGTTGAGCAAGGATATCTATTATGTTTCAATAAAACCTGGAGTCGATCAGGCCTTTATTGTTGGAGTTGTTGCCATTCTCGACAACATCTATGGTGAATCAACCAGCTGCTGAATTTTTAAGAAAGGGGACGATGGCAATTGCTCGTCGCCCTTCCATCGAATTGTGATTGAACTGTAGATTTGTGGCGGGACTCCATTTCGTTCGTCACCATGAACTGGATCTGCATATTTTGTTAACAGCAATGTATTCTTTTAGCTTTTATAGCATTTGTCCTGTAAATGTAATTGAACTATTTACCTTCTCCACTGCCTTCTGATCTCCCATTTGCCTTGCTTATCGTTGCTGCCATATAAGAGTAGATGAAGCAGGGCAAAGGCAACAGTAGCTGAATATATCATATCAACTTTTAATAATATAAACA ATGATTCCCCTAGTTAGCAAATTCTACTGTTCGTCTTCCGAGGTTGTGTTTGTCGTTAGGACGAGACCACACGTCATTAATGGAGGAGGTTTTGTTGTGACAGATTGTAATCAGAAAGTTGTTTTCAGTGTTGATGGGTGTGGGATTCTGGGAAAAGAAGAGGAGCTGGTTGTGAGGGATGAGAAGAGGGATGCTTTGCTTTTACTCCGTGGGAAGGGAGGGATTTTTGAGGCTCTAAGCTTTCATAAGATATGGAAAGCTTACAAATATGACTTCCAAGGATCTAAAAAGCTGGTTTTCAGCTTGAGAAGACCCAAGTCATGTCTTCCTGTGAAAAACGATGTTGGAATCAGAATAACAACAAAACCAAAGGTTAGCAGAAAAGATTGGGACTTCGAGGTCAGTGGATATTTCCCAGATAGAAGATGCAGCATCATTGATTCTCAAGGCAATGCAGTAGCTCAGATCGGAACGATTAAAAAGACTGGAGAGCAGTTGAGCAAGGATATCTATTATGTTTCAATAAAACCTGGAGTCGATCAGGCCTTTATTGTTGGAGTTGTTGCCATTCTCGACAACATCTATGGTGAATCAACCAGCTGCTGA MIPLVSKFYCSSSEVVFVVRTRPHVINGGGFVVTDCNQKVVFSVDGCGILGKEEELVVRDEKRDALLLLRGKGGIFEALSFHKIWKAYKYDFQGSKKLVFSLRRPKSCLPVKNDVGIRITTKPKVSRKDWDFEVSGYFPDRRCSIIDSQGNAVAQIGTIKKTGEQLSKDIYYVSIKPGVDQAFIVGVVAILDNIYGESTSC Homology
BLAST of Cp4.1LG18g03130 vs. ExPASy Swiss-Prot
Match: Q9ZUF7 (Protein LURP-one-related 6 OS=Arabidopsis thaliana OX=3702 GN=At2g05910 PE=2 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.2e-55 Identity = 113/203 (55.67%), Postives = 142/203 (69.95%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. ExPASy Swiss-Prot
Match: A0MFH4 (Protein LURP-one-related 16 OS=Arabidopsis thaliana OX=3702 GN=At5g20640 PE=2 SV=2) HSP 1 Score: 183.0 bits (463), Expect = 3.4e-45 Identity = 96/205 (46.83%), Postives = 143/205 (69.76%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. ExPASy Swiss-Prot
Match: Q9SSC7 (Protein LURP-one-related 5 OS=Arabidopsis thaliana OX=3702 GN=At1g80120 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14 Identity = 59/199 (29.65%), Postives = 94/199 (47.24%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. ExPASy Swiss-Prot
Match: Q9LVZ8 (Protein LURP-one-related 12 OS=Arabidopsis thaliana OX=3702 GN=At3g15810 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.8e-12 Identity = 54/198 (27.27%), Postives = 91/198 (45.96%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. ExPASy Swiss-Prot
Match: Q9LZX1 (Protein LURP-one-related 15 OS=Arabidopsis thaliana OX=3702 GN=At5g01750 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.3e-11 Identity = 50/196 (25.51%), Postives = 92/196 (46.94%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. NCBI nr
Match: XP_023516165.1 (protein LURP-one-related 6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 405 bits (1041), Expect = 1.45e-142 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. NCBI nr
Match: XP_022960806.1 (protein LURP-one-related 6-like [Cucurbita moschata] >KAG6590042.1 Protein LURP-one-related 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023706.1 Protein LURP-one-related 6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 405 bits (1040), Expect = 2.06e-142 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. NCBI nr
Match: XP_022987086.1 (protein LURP-one-related 6 [Cucurbita maxima]) HSP 1 Score: 404 bits (1037), Expect = 5.92e-142 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. NCBI nr
Match: XP_038878910.1 (protein LURP-one-related 6 [Benincasa hispida]) HSP 1 Score: 372 bits (954), Expect = 2.68e-129 Identity = 177/201 (88.06%), Postives = 193/201 (96.02%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. NCBI nr
Match: XP_008450937.1 (PREDICTED: protein LURP-one-related 6 [Cucumis melo] >KAA0055768.1 protein LURP-one-related 6 [Cucumis melo var. makuwa] >TYK10019.1 protein LURP-one-related 6 [Cucumis melo var. makuwa]) HSP 1 Score: 369 bits (948), Expect = 2.20e-128 Identity = 175/201 (87.06%), Postives = 192/201 (95.52%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. ExPASy TrEMBL
Match: A0A6J1H8M2 (protein LURP-one-related 6-like OS=Cucurbita moschata OX=3662 GN=LOC111461497 PE=3 SV=1) HSP 1 Score: 405 bits (1040), Expect = 1.00e-142 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. ExPASy TrEMBL
Match: A0A6J1JD51 (protein LURP-one-related 6 OS=Cucurbita maxima OX=3661 GN=LOC111484740 PE=3 SV=1) HSP 1 Score: 404 bits (1037), Expect = 2.87e-142 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. ExPASy TrEMBL
Match: A0A5D3CIE5 (Protein LURP-one-related 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001510 PE=3 SV=1) HSP 1 Score: 369 bits (948), Expect = 1.06e-128 Identity = 175/201 (87.06%), Postives = 192/201 (95.52%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. ExPASy TrEMBL
Match: A0A1S3BQC6 (protein LURP-one-related 6 OS=Cucumis melo OX=3656 GN=LOC103492375 PE=3 SV=1) HSP 1 Score: 369 bits (948), Expect = 1.06e-128 Identity = 175/201 (87.06%), Postives = 192/201 (95.52%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. ExPASy TrEMBL
Match: A0A6J1D1V1 (protein LURP-one-related 6 OS=Momordica charantia OX=3673 GN=LOC111016513 PE=3 SV=1) HSP 1 Score: 355 bits (912), Expect = 2.94e-123 Identity = 171/201 (85.07%), Postives = 186/201 (92.54%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. TAIR 10
Match: AT2G05910.1 (Protein of unknown function (DUF567) ) HSP 1 Score: 216.9 bits (551), Expect = 1.5e-56 Identity = 113/203 (55.67%), Postives = 142/203 (69.95%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. TAIR 10
Match: AT5G20640.1 (Protein of unknown function (DUF567) ) HSP 1 Score: 183.0 bits (463), Expect = 2.4e-46 Identity = 96/205 (46.83%), Postives = 143/205 (69.76%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. TAIR 10
Match: AT1G80120.1 (Protein of unknown function (DUF567) ) HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15 Identity = 59/199 (29.65%), Postives = 94/199 (47.24%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. TAIR 10
Match: AT3G15810.1 (Protein of unknown function (DUF567) ) HSP 1 Score: 73.2 bits (178), Expect = 2.7e-13 Identity = 54/198 (27.27%), Postives = 91/198 (45.96%), Query Frame = 0
BLAST of Cp4.1LG18g03130 vs. TAIR 10
Match: AT5G01750.2 (Protein of unknown function (DUF567) ) HSP 1 Score: 70.1 bits (170), Expect = 2.3e-12 Identity = 50/196 (25.51%), Postives = 92/196 (46.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|