Homology
BLAST of Cp4.1LG18g02860 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 5.2e-43
Identity = 93/238 (39.08%), Postives = 145/238 (60.92%), Query Frame = 0
Query: 9 PSAS--PINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSK 68
PS+S P +S + H S + L +C ++ L+ H+Q+I++GL N A+ +L++FC +S
Sbjct: 21 PSSSDPPYDSIRNHPS-LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSP 80
Query: 69 NGD-LDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPS 128
+ + L YA+ +FKTI P+ I+NT+ RG+ P + L LY+ M+ +LPN +TFP
Sbjct: 81 HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 140
Query: 129 LIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPD 188
++++C A +EG+QIHGHVLK G D + +LI MY LE+A +VFD D
Sbjct: 141 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 200
Query: 189 AVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRM 244
VS+T L+ GYA G+++ A ++F+ +P + SWNAMIS + + EA LF M
Sbjct: 201 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
BLAST of Cp4.1LG18g02860 vs. ExPASy Swiss-Prot
Match:
Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 174.5 bits (441), Expect = 1.5e-42
Identity = 82/217 (37.79%), Postives = 136/217 (62.67%), Query Frame = 0
Query: 30 CSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGDLDYALLLFKTIPNPDAYIYN 89
CS+M ELKQ H+ +I+ GL +D R++ FC S + D++YA L+F I + + +++N
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWN 94
Query: 90 TLIRGYLQLQFPRACLLLYLEML--HKCVLPNKFTFPSLIRACCIDNAIEEGKQIHGHVL 149
T+IRG+ + FP + ++++ML V P + T+PS+ +A +G+Q+HG V+
Sbjct: 95 TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 154
Query: 150 KFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGFLDEALE 209
K G D F +N ++HMY L EA R+F G+ D V+W +++ G+A+CG +D+A
Sbjct: 155 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQN 214
Query: 210 VFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
+F+ MP+R+ SWN+MIS V+N RF +A +F M+
Sbjct: 215 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
BLAST of Cp4.1LG18g02860 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 2.0e-39
Identity = 85/219 (38.81%), Postives = 128/219 (58.45%), Query Frame = 0
Query: 27 LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-LDYALLLFKTIPNPDA 86
L+ CS ELKQ H+++++ GL D+ A+ + + FC S + D L YA ++F PD
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 87 YIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPSLIRACCIDNAIEEGKQIHGH 146
+++N +IRG+ P LLLY ML N +TFPSL++AC +A EE QIH
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 147 VLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGFLDEA 206
+ K G+ D ++ N+LI+ YA + + A +FD I PD VSW +++ GY + G +D A
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 207 LEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
L +F M E+++ SW MIS VQ + EA LF+ M+
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
BLAST of Cp4.1LG18g02860 vs. ExPASy Swiss-Prot
Match:
Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 1.6e-36
Identity = 79/223 (35.43%), Postives = 124/223 (55.61%), Query Frame = 0
Query: 27 LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-----LDYALLLFKTIP 86
L+SCSS S+LK H ++R L +D RL+ C + L YA +F I
Sbjct: 19 LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78
Query: 87 NPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPSLIRACCIDNAIEEGKQ 146
NP+ +++N LIR + P Y +ML + P+ TFP LI+A + G+Q
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138
Query: 147 IHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGF 206
H +++FGF+ D + +N+L+HMYAN + A R+F + D VSWT+++ GY +CG
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198
Query: 207 LDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
++ A E+F+ MP R+ +W+ MI+ +NN F +A LF M+
Sbjct: 199 VENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241
BLAST of Cp4.1LG18g02860 vs. ExPASy Swiss-Prot
Match:
Q38959 (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A6 PE=2 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 2.8e-36
Identity = 94/247 (38.06%), Postives = 139/247 (56.28%), Query Frame = 0
Query: 4 LLALQPSASP-INSPKVHTSP--IHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 63
+ A PS+ P + SP SP + L++CS+ S+LKQ H++II+ L+ D + +L+
Sbjct: 1 MAAPSPSSPPNLLSPPPFRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLIS 60
Query: 64 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEML--HKCVLP 123
S G+ YA L+F + +P + +N +IR PR LLL++ M+ H+
Sbjct: 61 --VSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF- 120
Query: 124 NKFTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVF 183
+KFTFP +I+AC ++I G Q+HG +K GF D F QN L+ +Y + R+VF
Sbjct: 121 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 180
Query: 184 DGIELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFA 243
D + VSWTT+L G LD A VF MP R+ SW AMI++ V+N R EAF
Sbjct: 181 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 240
Query: 244 LFNRMRI 246
LF RM++
Sbjct: 241 LFRRMQV 244
BLAST of Cp4.1LG18g02860 vs. NCBI nr
Match:
XP_023515687.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 493 bits (1270), Expect = 2.68e-170
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
Query: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
Query: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF
Sbjct: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
Query: 241 NRMR 244
NRMR
Sbjct: 241 NRMR 244
BLAST of Cp4.1LG18g02860 vs. NCBI nr
Match:
XP_022960820.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata])
HSP 1 Score: 486 bits (1252), Expect = 1.34e-167
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0
Query: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
Query: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
IELPD VSWTTLLTGYAQCGFLDEAL+VFESMPERSSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYAQCGFLDEALQVFESMPERSSASWNAMISSFVQNNRFHEAFALF 240
Query: 241 NRMR 244
NRMR
Sbjct: 241 NRMR 244
BLAST of Cp4.1LG18g02860 vs. NCBI nr
Match:
KAG6590058.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 486 bits (1252), Expect = 1.34e-167
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0
Query: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
Query: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
IELPD VSWTTLLTGYAQCGFLDEAL+VFESMPERSSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYAQCGFLDEALQVFESMPERSSASWNAMISSFVQNNRFHEAFALF 240
Query: 241 NRMR 244
NRMR
Sbjct: 241 NRMR 244
BLAST of Cp4.1LG18g02860 vs. NCBI nr
Match:
KAG7023724.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 477 bits (1227), Expect = 8.22e-164
Identity = 238/244 (97.54%), Postives = 239/244 (97.95%), Query Frame = 0
Query: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
Query: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHK VLPNK
Sbjct: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120
Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
FTFPSLIRACCIDNAIEEGKQIH HVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
IELPD VSWTTLLTGYA CGFLDEAL+VFESMPERSSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYALCGFLDEALQVFESMPERSSASWNAMISSFVQNNRFHEAFALF 240
Query: 241 NRMR 244
NRMR
Sbjct: 241 NRMR 244
BLAST of Cp4.1LG18g02860 vs. NCBI nr
Match:
XP_022987211.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima] >XP_022987212.1 pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima])
HSP 1 Score: 474 bits (1221), Expect = 7.10e-163
Identity = 236/244 (96.72%), Postives = 237/244 (97.13%), Query Frame = 0
Query: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
MSSLLALQ SASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1 MSSLLALQLSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
Query: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
FCAV KNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61 FCAVCKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
FTFPSLIRACCIDNAIEEGKQIH HVLKFGFR DRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRADRFSQNNLIHMYANFQSLEEARRVFDG 180
Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
IELPD VSWTTLLTGYAQCGFLDEAL+VFESMPE SSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYAQCGFLDEALQVFESMPEHSSASWNAMISSFVQNNRFHEAFALF 240
Query: 241 NRMR 244
NRMR
Sbjct: 241 NRMR 244
BLAST of Cp4.1LG18g02860 vs. ExPASy TrEMBL
Match:
A0A6J1HA70 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita moschata OX=3662 GN=LOC111461510 PE=3 SV=1)
HSP 1 Score: 486 bits (1252), Expect = 6.50e-168
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0
Query: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
Query: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
IELPD VSWTTLLTGYAQCGFLDEAL+VFESMPERSSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYAQCGFLDEALQVFESMPERSSASWNAMISSFVQNNRFHEAFALF 240
Query: 241 NRMR 244
NRMR
Sbjct: 241 NRMR 244
BLAST of Cp4.1LG18g02860 vs. ExPASy TrEMBL
Match:
A0A6J1JDI6 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima OX=3661 GN=LOC111484832 PE=3 SV=1)
HSP 1 Score: 474 bits (1221), Expect = 3.44e-163
Identity = 236/244 (96.72%), Postives = 237/244 (97.13%), Query Frame = 0
Query: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
MSSLLALQ SASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1 MSSLLALQLSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
Query: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
FCAV KNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61 FCAVCKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
FTFPSLIRACCIDNAIEEGKQIH HVLKFGFR DRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRADRFSQNNLIHMYANFQSLEEARRVFDG 180
Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
IELPD VSWTTLLTGYAQCGFLDEAL+VFESMPE SSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYAQCGFLDEALQVFESMPEHSSASWNAMISSFVQNNRFHEAFALF 240
Query: 241 NRMR 244
NRMR
Sbjct: 241 NRMR 244
BLAST of Cp4.1LG18g02860 vs. ExPASy TrEMBL
Match:
A0A6J1CAX3 (uncharacterized protein LOC111009921 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009921 PE=3 SV=1)
HSP 1 Score: 432 bits (1112), Expect = 2.76e-140
Identity = 213/244 (87.30%), Postives = 227/244 (93.03%), Query Frame = 0
Query: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
M LLALQP+AS INS +VHTSPIHGL+SCSSMSELKQ+HSQIIRLGLS DNDAMGRL+K
Sbjct: 1 MPPLLALQPTASVINSSRVHTSPIHGLQSCSSMSELKQFHSQIIRLGLSIDNDAMGRLIK 60
Query: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
FCAVSKNGDLDYALLLFKTIP PDA+IYNTLIRGYLQ Q RAC+LLYL+MLHK VLPNK
Sbjct: 61 FCAVSKNGDLDYALLLFKTIPYPDAFIYNTLIRGYLQQQSSRACILLYLQMLHKVVLPNK 120
Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
FTFPSLIRACCIDNAIEEGKQ+H HVLKFGFRTD FSQNNLIHMYANFQSLE+ARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQVHAHVLKFGFRTDIFSQNNLIHMYANFQSLEDARRVFDG 180
Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
IELPDAV+WTTLLTGYAQCG +DEA +VFESMPE +SASWNAMISS VQNNRFHEAF LF
Sbjct: 181 IELPDAVTWTTLLTGYAQCGLVDEAFQVFESMPEHNSASWNAMISSFVQNNRFHEAFXLF 240
Query: 241 NRMR 244
NRMR
Sbjct: 241 NRMR 244
BLAST of Cp4.1LG18g02860 vs. ExPASy TrEMBL
Match:
A0A6J1CAN4 (uncharacterized protein LOC111009921 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009921 PE=3 SV=1)
HSP 1 Score: 432 bits (1112), Expect = 9.81e-139
Identity = 213/244 (87.30%), Postives = 227/244 (93.03%), Query Frame = 0
Query: 1 MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
M LLALQP+AS INS +VHTSPIHGL+SCSSMSELKQ+HSQIIRLGLS DNDAMGRL+K
Sbjct: 1 MPPLLALQPTASVINSSRVHTSPIHGLQSCSSMSELKQFHSQIIRLGLSIDNDAMGRLIK 60
Query: 61 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
FCAVSKNGDLDYALLLFKTIP PDA+IYNTLIRGYLQ Q RAC+LLYL+MLHK VLPNK
Sbjct: 61 FCAVSKNGDLDYALLLFKTIPYPDAFIYNTLIRGYLQQQSSRACILLYLQMLHKVVLPNK 120
Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
FTFPSLIRACCIDNAIEEGKQ+H HVLKFGFRTD FSQNNLIHMYANFQSLE+ARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQVHAHVLKFGFRTDIFSQNNLIHMYANFQSLEDARRVFDG 180
Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
IELPDAV+WTTLLTGYAQCG +DEA +VFESMPE +SASWNAMISS VQNNRFHEAF LF
Sbjct: 181 IELPDAVTWTTLLTGYAQCGLVDEAFQVFESMPEHNSASWNAMISSFVQNNRFHEAFXLF 240
Query: 241 NRMR 244
NRMR
Sbjct: 241 NRMR 244
BLAST of Cp4.1LG18g02860 vs. ExPASy TrEMBL
Match:
A0A0A0LWF1 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569490 PE=3 SV=1)
HSP 1 Score: 377 bits (967), Expect = 6.26e-125
Identity = 189/246 (76.83%), Postives = 210/246 (85.37%), Query Frame = 0
Query: 1 MSSLLALQPSASPINSPKVHTSPI-HGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLV 60
M+SLL L P S NS K + SPI H L SCSSMSELKQ+HSQIIRLGLSTDN+A+GRL+
Sbjct: 1 MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
Query: 61 KFCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPN 120
KFCAVSK GDL YALLLF +IP PDA+IYNTLIR YL P++ LLLYL+MLH V PN
Sbjct: 61 KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
Query: 121 KFTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFD 180
KFTFPS+IRACCIDN++EEGKQIH HV+KFGF DRF QNNLIHMYANFQSLE+ARRVFD
Sbjct: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
Query: 181 GIELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFAL 240
IELPD V+WTTLLTGYAQ G++DE+L VFESMPER+SASWNAMIS VQNNRFHEAF L
Sbjct: 181 CIELPDVVAWTTLLTGYAQLGYVDESLRVFESMPERNSASWNAMISCFVQNNRFHEAFGL 240
Query: 241 FNRMRI 245
FNRMRI
Sbjct: 241 FNRMRI 246
BLAST of Cp4.1LG18g02860 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 176.0 bits (445), Expect = 3.7e-44
Identity = 93/238 (39.08%), Postives = 145/238 (60.92%), Query Frame = 0
Query: 9 PSAS--PINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSK 68
PS+S P +S + H S + L +C ++ L+ H+Q+I++GL N A+ +L++FC +S
Sbjct: 21 PSSSDPPYDSIRNHPS-LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSP 80
Query: 69 NGD-LDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPS 128
+ + L YA+ +FKTI P+ I+NT+ RG+ P + L LY+ M+ +LPN +TFP
Sbjct: 81 HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 140
Query: 129 LIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPD 188
++++C A +EG+QIHGHVLK G D + +LI MY LE+A +VFD D
Sbjct: 141 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 200
Query: 189 AVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRM 244
VS+T L+ GYA G+++ A ++F+ +P + SWNAMIS + + EA LF M
Sbjct: 201 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
BLAST of Cp4.1LG18g02860 vs. TAIR 10
Match:
AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 174.5 bits (441), Expect = 1.1e-43
Identity = 82/217 (37.79%), Postives = 136/217 (62.67%), Query Frame = 0
Query: 30 CSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGDLDYALLLFKTIPNPDAYIYN 89
CS+M ELKQ H+ +I+ GL +D R++ FC S + D++YA L+F I + + +++N
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWN 94
Query: 90 TLIRGYLQLQFPRACLLLYLEML--HKCVLPNKFTFPSLIRACCIDNAIEEGKQIHGHVL 149
T+IRG+ + FP + ++++ML V P + T+PS+ +A +G+Q+HG V+
Sbjct: 95 TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 154
Query: 150 KFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGFLDEALE 209
K G D F +N ++HMY L EA R+F G+ D V+W +++ G+A+CG +D+A
Sbjct: 155 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQN 214
Query: 210 VFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
+F+ MP+R+ SWN+MIS V+N RF +A +F M+
Sbjct: 215 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
BLAST of Cp4.1LG18g02860 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 164.1 bits (414), Expect = 1.5e-40
Identity = 85/219 (38.81%), Postives = 128/219 (58.45%), Query Frame = 0
Query: 27 LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-LDYALLLFKTIPNPDA 86
L+ CS ELKQ H+++++ GL D+ A+ + + FC S + D L YA ++F PD
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 87 YIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPSLIRACCIDNAIEEGKQIHGH 146
+++N +IRG+ P LLLY ML N +TFPSL++AC +A EE QIH
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 147 VLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGFLDEA 206
+ K G+ D ++ N+LI+ YA + + A +FD I PD VSW +++ GY + G +D A
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 207 LEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
L +F M E+++ SW MIS VQ + EA LF+ M+
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
BLAST of Cp4.1LG18g02860 vs. TAIR 10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37
Identity = 79/223 (35.43%), Postives = 124/223 (55.61%), Query Frame = 0
Query: 27 LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-----LDYALLLFKTIP 86
L+SCSS S+LK H ++R L +D RL+ C + L YA +F I
Sbjct: 19 LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78
Query: 87 NPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPSLIRACCIDNAIEEGKQ 146
NP+ +++N LIR + P Y +ML + P+ TFP LI+A + G+Q
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138
Query: 147 IHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGF 206
H +++FGF+ D + +N+L+HMYAN + A R+F + D VSWT+++ GY +CG
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198
Query: 207 LDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
++ A E+F+ MP R+ +W+ MI+ +NN F +A LF M+
Sbjct: 199 VENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241
BLAST of Cp4.1LG18g02860 vs. TAIR 10
Match:
AT3G26630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 153.7 bits (387), Expect = 2.0e-37
Identity = 94/247 (38.06%), Postives = 139/247 (56.28%), Query Frame = 0
Query: 4 LLALQPSASP-INSPKVHTSP--IHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 63
+ A PS+ P + SP SP + L++CS+ S+LKQ H++II+ L+ D + +L+
Sbjct: 1 MAAPSPSSPPNLLSPPPFRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLIS 60
Query: 64 FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEML--HKCVLP 123
S G+ YA L+F + +P + +N +IR PR LLL++ M+ H+
Sbjct: 61 --VSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF- 120
Query: 124 NKFTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVF 183
+KFTFP +I+AC ++I G Q+HG +K GF D F QN L+ +Y + R+VF
Sbjct: 121 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 180
Query: 184 DGIELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFA 243
D + VSWTT+L G LD A VF MP R+ SW AMI++ V+N R EAF
Sbjct: 181 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 240
Query: 244 LFNRMRI 246
LF RM++
Sbjct: 241 LFRRMQV 244
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LN01 | 5.2e-43 | 39.08 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9SJG6 | 1.5e-42 | 37.79 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
Q9FJY7 | 2.0e-39 | 38.81 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9FG16 | 1.6e-36 | 35.43 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... | [more] |
Q38959 | 2.8e-36 | 38.06 | Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
XP_023515687.1 | 2.68e-170 | 100.00 | pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita pepo subsp... | [more] |
XP_022960820.1 | 1.34e-167 | 98.77 | pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata] | [more] |
KAG6590058.1 | 1.34e-167 | 98.77 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG7023724.1 | 8.22e-164 | 97.54 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022987211.1 | 7.10e-163 | 96.72 | pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima] >X... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HA70 | 6.50e-168 | 98.77 | pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita moschata... | [more] |
A0A6J1JDI6 | 3.44e-163 | 96.72 | pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima O... | [more] |
A0A6J1CAX3 | 2.76e-140 | 87.30 | uncharacterized protein LOC111009921 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1CAN4 | 9.81e-139 | 87.30 | uncharacterized protein LOC111009921 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A0A0LWF1 | 6.26e-125 | 76.83 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5694... | [more] |
Match Name | E-value | Identity | Description | |
AT1G08070.1 | 3.7e-44 | 39.08 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G42920.1 | 1.1e-43 | 37.79 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G66520.1 | 1.5e-40 | 38.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G06540.1 | 1.2e-37 | 35.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G26630.1 | 2.0e-37 | 38.06 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |