Cp4.1LG18g02860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG18g02860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG18: 4436560 .. 4437365 (+)
RNA-Seq ExpressionCp4.1LG18g02860
SyntenyCp4.1LG18g02860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCACTTCTTGCCCTTCAGCCCAGTGCATCCCCGATCAACTCCCCAAAAGTTCACACATCACCTATCCATGGCCTTAAGTCATGCTCATCCATGTCTGAGCTCAAGCAATATCACTCCCAGATTATCCGTCTTGGTCTTTCTACTGACAATGATGCCATGGGTCGTCTTGTCAAATTCTGTGCTGTATCCAAGAATGGAGACCTTGACTATGCACTTCTTTTATTCAAGACAATCCCCAACCCAGATGCATACATCTACAATACCTTAATAAGAGGCTACTTACAACTCCAATTCCCTAGAGCTTGCTTACTGTTGTATTTGGAAATGCTGCATAAGTGTGTCCTTCCCAATAAATTTACATTTCCTTCTCTAATTCGTGCTTGCTGCATCGATAATGCTATCGAGGAAGGGAAGCAAATTCATGGACATGTTCTTAAATTTGGCTTCAGAACAGATAGATTTTCTCAGAACAATTTGATTCATATGTATGCTAATTTTCAATCCTTGGAAGAAGCCAGAAGGGTCTTCGATGGTATTGAGCTACCCGATGCTGTGTCATGGACCACTCTGCTTACTGGGTATGCTCAGTGTGGATTTCTAGATGAAGCCTTAGAAGTCTTCGAGTCGATGCCCGAGCGCAGCTCTGCTTCTTGGAATGCCATGATTTCTTCTTGTGTCCAAAACAATCGATTTCATGAAGCATTTGCTTTGTTTAATCGGATGAGGTCGGAGAAGATTGTGTTGGACAAATACATGGCTGCTAGCATGTTATCAGCTTGCACAGGATTGGGATCACTTGA

mRNA sequence

ATGTCATCACTTCTTGCCCTTCAGCCCAGTGCATCCCCGATCAACTCCCCAAAAGTTCACACATCACCTATCCATGGCCTTAAGTCATGCTCATCCATGTCTGAGCTCAAGCAATATCACTCCCAGATTATCCGTCTTGGTCTTTCTACTGACAATGATGCCATGGGTCGTCTTGTCAAATTCTGTGCTGTATCCAAGAATGGAGACCTTGACTATGCACTTCTTTTATTCAAGACAATCCCCAACCCAGATGCATACATCTACAATACCTTAATAAGAGGCTACTTACAACTCCAATTCCCTAGAGCTTGCTTACTGTTGTATTTGGAAATGCTGCATAAGTGTGTCCTTCCCAATAAATTTACATTTCCTTCTCTAATTCGTGCTTGCTGCATCGATAATGCTATCGAGGAAGGGAAGCAAATTCATGGACATGTTCTTAAATTTGGCTTCAGAACAGATAGATTTTCTCAGAACAATTTGATTCATATGTATGCTAATTTTCAATCCTTGGAAGAAGCCAGAAGGGTCTTCGATGGTATTGAGCTACCCGATGCTGTGTCATGGACCACTCTGCTTACTGGGTATGCTCAGTGTGGATTTCTAGATGAAGCCTTAGAAGTCTTCGAGTCGATGCCCGAGCGCAGCTCTGCTTCTTGGAATGCCATGATTTCTTCTTGTGTCCAAAACAATCGATTTCATGAAGCATTTGCTTTGTTTAATCGGATGAGGATTGGGATCACTTGA

Coding sequence (CDS)

ATGTCATCACTTCTTGCCCTTCAGCCCAGTGCATCCCCGATCAACTCCCCAAAAGTTCACACATCACCTATCCATGGCCTTAAGTCATGCTCATCCATGTCTGAGCTCAAGCAATATCACTCCCAGATTATCCGTCTTGGTCTTTCTACTGACAATGATGCCATGGGTCGTCTTGTCAAATTCTGTGCTGTATCCAAGAATGGAGACCTTGACTATGCACTTCTTTTATTCAAGACAATCCCCAACCCAGATGCATACATCTACAATACCTTAATAAGAGGCTACTTACAACTCCAATTCCCTAGAGCTTGCTTACTGTTGTATTTGGAAATGCTGCATAAGTGTGTCCTTCCCAATAAATTTACATTTCCTTCTCTAATTCGTGCTTGCTGCATCGATAATGCTATCGAGGAAGGGAAGCAAATTCATGGACATGTTCTTAAATTTGGCTTCAGAACAGATAGATTTTCTCAGAACAATTTGATTCATATGTATGCTAATTTTCAATCCTTGGAAGAAGCCAGAAGGGTCTTCGATGGTATTGAGCTACCCGATGCTGTGTCATGGACCACTCTGCTTACTGGGTATGCTCAGTGTGGATTTCTAGATGAAGCCTTAGAAGTCTTCGAGTCGATGCCCGAGCGCAGCTCTGCTTCTTGGAATGCCATGATTTCTTCTTGTGTCCAAAACAATCGATTTCATGAAGCATTTGCTTTGTTTAATCGGATGAGGATTGGGATCACTTGA

Protein sequence

MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMRIGIT
Homology
BLAST of Cp4.1LG18g02860 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.2e-43
Identity = 93/238 (39.08%), Postives = 145/238 (60.92%), Query Frame = 0

Query: 9   PSAS--PINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSK 68
           PS+S  P +S + H S +  L +C ++  L+  H+Q+I++GL   N A+ +L++FC +S 
Sbjct: 21  PSSSDPPYDSIRNHPS-LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSP 80

Query: 69  NGD-LDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPS 128
           + + L YA+ +FKTI  P+  I+NT+ RG+     P + L LY+ M+   +LPN +TFP 
Sbjct: 81  HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 140

Query: 129 LIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPD 188
           ++++C    A +EG+QIHGHVLK G   D +   +LI MY     LE+A +VFD     D
Sbjct: 141 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 200

Query: 189 AVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRM 244
            VS+T L+ GYA  G+++ A ++F+ +P +   SWNAMIS   +   + EA  LF  M
Sbjct: 201 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257

BLAST of Cp4.1LG18g02860 vs. ExPASy Swiss-Prot
Match: Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.5e-42
Identity = 82/217 (37.79%), Postives = 136/217 (62.67%), Query Frame = 0

Query: 30  CSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGDLDYALLLFKTIPNPDAYIYN 89
           CS+M ELKQ H+ +I+ GL +D     R++ FC  S + D++YA L+F  I + + +++N
Sbjct: 35  CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWN 94

Query: 90  TLIRGYLQLQFPRACLLLYLEML--HKCVLPNKFTFPSLIRACCIDNAIEEGKQIHGHVL 149
           T+IRG+ +  FP   + ++++ML     V P + T+PS+ +A        +G+Q+HG V+
Sbjct: 95  TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 154

Query: 150 KFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGFLDEALE 209
           K G   D F +N ++HMY     L EA R+F G+   D V+W +++ G+A+CG +D+A  
Sbjct: 155 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQN 214

Query: 210 VFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
           +F+ MP+R+  SWN+MIS  V+N RF +A  +F  M+
Sbjct: 215 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250

BLAST of Cp4.1LG18g02860 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.0e-39
Identity = 85/219 (38.81%), Postives = 128/219 (58.45%), Query Frame = 0

Query: 27  LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-LDYALLLFKTIPNPDA 86
           L+ CS   ELKQ H+++++ GL  D+ A+ + + FC  S + D L YA ++F     PD 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 87  YIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPSLIRACCIDNAIEEGKQIHGH 146
           +++N +IRG+     P   LLLY  ML      N +TFPSL++AC   +A EE  QIH  
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140

Query: 147 VLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGFLDEA 206
           + K G+  D ++ N+LI+ YA   + + A  +FD I  PD VSW +++ GY + G +D A
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200

Query: 207 LEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
           L +F  M E+++ SW  MIS  VQ +   EA  LF+ M+
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239

BLAST of Cp4.1LG18g02860 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-36
Identity = 79/223 (35.43%), Postives = 124/223 (55.61%), Query Frame = 0

Query: 27  LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-----LDYALLLFKTIP 86
           L+SCSS S+LK  H  ++R  L +D     RL+  C      +     L YA  +F  I 
Sbjct: 19  LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78

Query: 87  NPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPSLIRACCIDNAIEEGKQ 146
           NP+ +++N LIR +     P      Y +ML   + P+  TFP LI+A      +  G+Q
Sbjct: 79  NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138

Query: 147 IHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGF 206
            H  +++FGF+ D + +N+L+HMYAN   +  A R+F  +   D VSWT+++ GY +CG 
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198

Query: 207 LDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
           ++ A E+F+ MP R+  +W+ MI+   +NN F +A  LF  M+
Sbjct: 199 VENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241

BLAST of Cp4.1LG18g02860 vs. ExPASy Swiss-Prot
Match: Q38959 (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A6 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.8e-36
Identity = 94/247 (38.06%), Postives = 139/247 (56.28%), Query Frame = 0

Query: 4   LLALQPSASP-INSPKVHTSP--IHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 63
           + A  PS+ P + SP    SP   + L++CS+ S+LKQ H++II+  L+ D   + +L+ 
Sbjct: 1   MAAPSPSSPPNLLSPPPFRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLIS 60

Query: 64  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEML--HKCVLP 123
               S  G+  YA L+F  + +P  + +N +IR       PR  LLL++ M+  H+    
Sbjct: 61  --VSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF- 120

Query: 124 NKFTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVF 183
           +KFTFP +I+AC   ++I  G Q+HG  +K GF  D F QN L+ +Y      +  R+VF
Sbjct: 121 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 180

Query: 184 DGIELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFA 243
           D +     VSWTT+L G      LD A  VF  MP R+  SW AMI++ V+N R  EAF 
Sbjct: 181 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 240

Query: 244 LFNRMRI 246
           LF RM++
Sbjct: 241 LFRRMQV 244

BLAST of Cp4.1LG18g02860 vs. NCBI nr
Match: XP_023515687.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493 bits (1270), Expect = 2.68e-170
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
           FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180

Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
           IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF
Sbjct: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240

Query: 241 NRMR 244
           NRMR
Sbjct: 241 NRMR 244

BLAST of Cp4.1LG18g02860 vs. NCBI nr
Match: XP_022960820.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata])

HSP 1 Score: 486 bits (1252), Expect = 1.34e-167
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
           FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180

Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
           IELPD VSWTTLLTGYAQCGFLDEAL+VFESMPERSSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYAQCGFLDEALQVFESMPERSSASWNAMISSFVQNNRFHEAFALF 240

Query: 241 NRMR 244
           NRMR
Sbjct: 241 NRMR 244

BLAST of Cp4.1LG18g02860 vs. NCBI nr
Match: KAG6590058.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 486 bits (1252), Expect = 1.34e-167
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
           FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180

Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
           IELPD VSWTTLLTGYAQCGFLDEAL+VFESMPERSSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYAQCGFLDEALQVFESMPERSSASWNAMISSFVQNNRFHEAFALF 240

Query: 241 NRMR 244
           NRMR
Sbjct: 241 NRMR 244

BLAST of Cp4.1LG18g02860 vs. NCBI nr
Match: KAG7023724.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 477 bits (1227), Expect = 8.22e-164
Identity = 238/244 (97.54%), Postives = 239/244 (97.95%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
           FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHK VLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKRVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQIH HVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180

Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
           IELPD VSWTTLLTGYA CGFLDEAL+VFESMPERSSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYALCGFLDEALQVFESMPERSSASWNAMISSFVQNNRFHEAFALF 240

Query: 241 NRMR 244
           NRMR
Sbjct: 241 NRMR 244

BLAST of Cp4.1LG18g02860 vs. NCBI nr
Match: XP_022987211.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima] >XP_022987212.1 pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima])

HSP 1 Score: 474 bits (1221), Expect = 7.10e-163
Identity = 236/244 (96.72%), Postives = 237/244 (97.13%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSLLALQ SASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1   MSSLLALQLSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
           FCAV KNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61  FCAVCKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQIH HVLKFGFR DRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRADRFSQNNLIHMYANFQSLEEARRVFDG 180

Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
           IELPD VSWTTLLTGYAQCGFLDEAL+VFESMPE SSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYAQCGFLDEALQVFESMPEHSSASWNAMISSFVQNNRFHEAFALF 240

Query: 241 NRMR 244
           NRMR
Sbjct: 241 NRMR 244

BLAST of Cp4.1LG18g02860 vs. ExPASy TrEMBL
Match: A0A6J1HA70 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita moschata OX=3662 GN=LOC111461510 PE=3 SV=1)

HSP 1 Score: 486 bits (1252), Expect = 6.50e-168
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
           FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180

Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
           IELPD VSWTTLLTGYAQCGFLDEAL+VFESMPERSSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYAQCGFLDEALQVFESMPERSSASWNAMISSFVQNNRFHEAFALF 240

Query: 241 NRMR 244
           NRMR
Sbjct: 241 NRMR 244

BLAST of Cp4.1LG18g02860 vs. ExPASy TrEMBL
Match: A0A6J1JDI6 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima OX=3661 GN=LOC111484832 PE=3 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 3.44e-163
Identity = 236/244 (96.72%), Postives = 237/244 (97.13%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           MSSLLALQ SASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK
Sbjct: 1   MSSLLALQLSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
           FCAV KNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK
Sbjct: 61  FCAVCKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQIH HVLKFGFR DRFSQNNLIHMYANFQSLEEARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRADRFSQNNLIHMYANFQSLEEARRVFDG 180

Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
           IELPD VSWTTLLTGYAQCGFLDEAL+VFESMPE SSASWNAMISS VQNNRFHEAFALF
Sbjct: 181 IELPDVVSWTTLLTGYAQCGFLDEALQVFESMPEHSSASWNAMISSFVQNNRFHEAFALF 240

Query: 241 NRMR 244
           NRMR
Sbjct: 241 NRMR 244

BLAST of Cp4.1LG18g02860 vs. ExPASy TrEMBL
Match: A0A6J1CAX3 (uncharacterized protein LOC111009921 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009921 PE=3 SV=1)

HSP 1 Score: 432 bits (1112), Expect = 2.76e-140
Identity = 213/244 (87.30%), Postives = 227/244 (93.03%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           M  LLALQP+AS INS +VHTSPIHGL+SCSSMSELKQ+HSQIIRLGLS DNDAMGRL+K
Sbjct: 1   MPPLLALQPTASVINSSRVHTSPIHGLQSCSSMSELKQFHSQIIRLGLSIDNDAMGRLIK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
           FCAVSKNGDLDYALLLFKTIP PDA+IYNTLIRGYLQ Q  RAC+LLYL+MLHK VLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPYPDAFIYNTLIRGYLQQQSSRACILLYLQMLHKVVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQ+H HVLKFGFRTD FSQNNLIHMYANFQSLE+ARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQVHAHVLKFGFRTDIFSQNNLIHMYANFQSLEDARRVFDG 180

Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
           IELPDAV+WTTLLTGYAQCG +DEA +VFESMPE +SASWNAMISS VQNNRFHEAF LF
Sbjct: 181 IELPDAVTWTTLLTGYAQCGLVDEAFQVFESMPEHNSASWNAMISSFVQNNRFHEAFXLF 240

Query: 241 NRMR 244
           NRMR
Sbjct: 241 NRMR 244

BLAST of Cp4.1LG18g02860 vs. ExPASy TrEMBL
Match: A0A6J1CAN4 (uncharacterized protein LOC111009921 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009921 PE=3 SV=1)

HSP 1 Score: 432 bits (1112), Expect = 9.81e-139
Identity = 213/244 (87.30%), Postives = 227/244 (93.03%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 60
           M  LLALQP+AS INS +VHTSPIHGL+SCSSMSELKQ+HSQIIRLGLS DNDAMGRL+K
Sbjct: 1   MPPLLALQPTASVINSSRVHTSPIHGLQSCSSMSELKQFHSQIIRLGLSIDNDAMGRLIK 60

Query: 61  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNK 120
           FCAVSKNGDLDYALLLFKTIP PDA+IYNTLIRGYLQ Q  RAC+LLYL+MLHK VLPNK
Sbjct: 61  FCAVSKNGDLDYALLLFKTIPYPDAFIYNTLIRGYLQQQSSRACILLYLQMLHKVVLPNK 120

Query: 121 FTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDG 180
           FTFPSLIRACCIDNAIEEGKQ+H HVLKFGFRTD FSQNNLIHMYANFQSLE+ARRVFDG
Sbjct: 121 FTFPSLIRACCIDNAIEEGKQVHAHVLKFGFRTDIFSQNNLIHMYANFQSLEDARRVFDG 180

Query: 181 IELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALF 240
           IELPDAV+WTTLLTGYAQCG +DEA +VFESMPE +SASWNAMISS VQNNRFHEAF LF
Sbjct: 181 IELPDAVTWTTLLTGYAQCGLVDEAFQVFESMPEHNSASWNAMISSFVQNNRFHEAFXLF 240

Query: 241 NRMR 244
           NRMR
Sbjct: 241 NRMR 244

BLAST of Cp4.1LG18g02860 vs. ExPASy TrEMBL
Match: A0A0A0LWF1 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569490 PE=3 SV=1)

HSP 1 Score: 377 bits (967), Expect = 6.26e-125
Identity = 189/246 (76.83%), Postives = 210/246 (85.37%), Query Frame = 0

Query: 1   MSSLLALQPSASPINSPKVHTSPI-HGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLV 60
           M+SLL L P  S  NS K + SPI H L SCSSMSELKQ+HSQIIRLGLSTDN+A+GRL+
Sbjct: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60

Query: 61  KFCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPN 120
           KFCAVSK GDL YALLLF +IP PDA+IYNTLIR YL    P++ LLLYL+MLH  V PN
Sbjct: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120

Query: 121 KFTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFD 180
           KFTFPS+IRACCIDN++EEGKQIH HV+KFGF  DRF QNNLIHMYANFQSLE+ARRVFD
Sbjct: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180

Query: 181 GIELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFAL 240
            IELPD V+WTTLLTGYAQ G++DE+L VFESMPER+SASWNAMIS  VQNNRFHEAF L
Sbjct: 181 CIELPDVVAWTTLLTGYAQLGYVDESLRVFESMPERNSASWNAMISCFVQNNRFHEAFGL 240

Query: 241 FNRMRI 245
           FNRMRI
Sbjct: 241 FNRMRI 246

BLAST of Cp4.1LG18g02860 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 176.0 bits (445), Expect = 3.7e-44
Identity = 93/238 (39.08%), Postives = 145/238 (60.92%), Query Frame = 0

Query: 9   PSAS--PINSPKVHTSPIHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSK 68
           PS+S  P +S + H S +  L +C ++  L+  H+Q+I++GL   N A+ +L++FC +S 
Sbjct: 21  PSSSDPPYDSIRNHPS-LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSP 80

Query: 69  NGD-LDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPS 128
           + + L YA+ +FKTI  P+  I+NT+ RG+     P + L LY+ M+   +LPN +TFP 
Sbjct: 81  HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 140

Query: 129 LIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPD 188
           ++++C    A +EG+QIHGHVLK G   D +   +LI MY     LE+A +VFD     D
Sbjct: 141 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 200

Query: 189 AVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRM 244
            VS+T L+ GYA  G+++ A ++F+ +P +   SWNAMIS   +   + EA  LF  M
Sbjct: 201 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257

BLAST of Cp4.1LG18g02860 vs. TAIR 10
Match: AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-43
Identity = 82/217 (37.79%), Postives = 136/217 (62.67%), Query Frame = 0

Query: 30  CSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGDLDYALLLFKTIPNPDAYIYN 89
           CS+M ELKQ H+ +I+ GL +D     R++ FC  S + D++YA L+F  I + + +++N
Sbjct: 35  CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWN 94

Query: 90  TLIRGYLQLQFPRACLLLYLEML--HKCVLPNKFTFPSLIRACCIDNAIEEGKQIHGHVL 149
           T+IRG+ +  FP   + ++++ML     V P + T+PS+ +A        +G+Q+HG V+
Sbjct: 95  TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 154

Query: 150 KFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGFLDEALE 209
           K G   D F +N ++HMY     L EA R+F G+   D V+W +++ G+A+CG +D+A  
Sbjct: 155 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQN 214

Query: 210 VFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
           +F+ MP+R+  SWN+MIS  V+N RF +A  +F  M+
Sbjct: 215 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250

BLAST of Cp4.1LG18g02860 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-40
Identity = 85/219 (38.81%), Postives = 128/219 (58.45%), Query Frame = 0

Query: 27  LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-LDYALLLFKTIPNPDA 86
           L+ CS   ELKQ H+++++ GL  D+ A+ + + FC  S + D L YA ++F     PD 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 87  YIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPSLIRACCIDNAIEEGKQIHGH 146
           +++N +IRG+     P   LLLY  ML      N +TFPSL++AC   +A EE  QIH  
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140

Query: 147 VLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGFLDEA 206
           + K G+  D ++ N+LI+ YA   + + A  +FD I  PD VSW +++ GY + G +D A
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200

Query: 207 LEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
           L +F  M E+++ SW  MIS  VQ +   EA  LF+ M+
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239

BLAST of Cp4.1LG18g02860 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37
Identity = 79/223 (35.43%), Postives = 124/223 (55.61%), Query Frame = 0

Query: 27  LKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVKFCAVSKNGD-----LDYALLLFKTIP 86
           L+SCSS S+LK  H  ++R  L +D     RL+  C      +     L YA  +F  I 
Sbjct: 19  LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78

Query: 87  NPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPNKFTFPSLIRACCIDNAIEEGKQ 146
           NP+ +++N LIR +     P      Y +ML   + P+  TFP LI+A      +  G+Q
Sbjct: 79  NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138

Query: 147 IHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFDGIELPDAVSWTTLLTGYAQCGF 206
            H  +++FGF+ D + +N+L+HMYAN   +  A R+F  +   D VSWT+++ GY +CG 
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198

Query: 207 LDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFALFNRMR 245
           ++ A E+F+ MP R+  +W+ MI+   +NN F +A  LF  M+
Sbjct: 199 VENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241

BLAST of Cp4.1LG18g02860 vs. TAIR 10
Match: AT3G26630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 2.0e-37
Identity = 94/247 (38.06%), Postives = 139/247 (56.28%), Query Frame = 0

Query: 4   LLALQPSASP-INSPKVHTSP--IHGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLVK 63
           + A  PS+ P + SP    SP   + L++CS+ S+LKQ H++II+  L+ D   + +L+ 
Sbjct: 1   MAAPSPSSPPNLLSPPPFRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLIS 60

Query: 64  FCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEML--HKCVLP 123
               S  G+  YA L+F  + +P  + +N +IR       PR  LLL++ M+  H+    
Sbjct: 61  --VSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF- 120

Query: 124 NKFTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVF 183
           +KFTFP +I+AC   ++I  G Q+HG  +K GF  D F QN L+ +Y      +  R+VF
Sbjct: 121 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 180

Query: 184 DGIELPDAVSWTTLLTGYAQCGFLDEALEVFESMPERSSASWNAMISSCVQNNRFHEAFA 243
           D +     VSWTT+L G      LD A  VF  MP R+  SW AMI++ V+N R  EAF 
Sbjct: 181 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 240

Query: 244 LFNRMRI 246
           LF RM++
Sbjct: 241 LFRRMQV 244

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LN015.2e-4339.08Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9SJG61.5e-4237.79Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... [more]
Q9FJY72.0e-3938.81Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9FG161.6e-3635.43Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
Q389592.8e-3638.06Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
XP_023515687.12.68e-170100.00pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita pepo subsp... [more]
XP_022960820.11.34e-16798.77pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata][more]
KAG6590058.11.34e-16798.77Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG7023724.18.22e-16497.54Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022987211.17.10e-16396.72pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima] >X... [more]
Match NameE-valueIdentityDescription
A0A6J1HA706.50e-16898.77pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita moschata... [more]
A0A6J1JDI63.44e-16396.72pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima O... [more]
A0A6J1CAX32.76e-14087.30uncharacterized protein LOC111009921 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CAN49.81e-13987.30uncharacterized protein LOC111009921 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A0A0LWF16.26e-12576.83DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5694... [more]
Match NameE-valueIdentityDescription
AT1G08070.13.7e-4439.08Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G42920.11.1e-4337.79Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G66520.11.5e-4038.81Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G06540.11.2e-3735.43Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G26630.12.0e-3738.06Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 58..169
e-value: 1.3E-19
score: 72.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 170..246
e-value: 9.4E-19
score: 70.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 83..131
e-value: 1.7E-8
score: 34.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 86..119
e-value: 1.1E-4
score: 20.1
coord: 187..215
e-value: 1.9E-6
score: 25.7
coord: 219..244
e-value: 1.4E-7
score: 29.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 187..215
e-value: 1.7E-8
score: 34.2
coord: 219..244
e-value: 1.4E-7
score: 31.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 185..219
score: 11.553267
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 84..118
score: 9.021208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR47928:SF91OS06G0231400 PROTEINcoord: 24..245
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 24..245

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g02860.1Cp4.1LG18g02860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding