Cp4.1LG18g01220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGCGAAAAAAATAGGTGGGGTCATTATTAGGAGGTAGATAAATAACTAAAAGAAATAAATAGGGCCTTGGGAGTTGGGAGGGGGCCCACTCTCACACAGAAAATTAAAAAAAAAAAAAAAAACAAAATAAAAACAAAAAACAAAAAAGAGAAATAAATAAGCAATCAAAGTCCTGCAATGGCGGTAGCTGCTGCCATTAATTCACACTCGCCTTCCTCTTCCCAAACCACTTCCCTTCTTCTCTCTCTCTCTCTCTCTATATATCTCTCTCCTCCTCCTCCTCCTCTTCTCTTCAATTCCACCGCCAACCAACTCAAACCCTAGAAAACGAAACAACCGTCTCGATCTACACCAATGGCGACGCCTTCGATCTGCGCGCTAGCGGCGGTGATAATCGCGATTCACGGCATTGCAGGGGCGGTGGCGCAGGCTCCGGCGCCGGGGCCAGCGGTTGCGACGGACTGCTTCACGACGCTGCTGAATATGTCGGATTGCCTGTCGTACGTGTCGGCGGGGAGCAAGGACGTGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTGGTGGAGAGTAGCCCTAGCTGCCTCTGTCAGCTGCTTAGCGATCCTAATAAAGTTGGGTTAACCATTGATGTCGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACCCCTCCCGTTAATCTCTGCTCTCGTAAGCTTTCTTTTCCCTTTCCTTAAATAAAAAATTAAAAAATTAAAAAAATTAAAATTAAAATTAAAATGAATCTTTTTAAAATACCCAATTTAATCTTTTTTTTTCTTCTTTTTAATGGAAATTTTCAATTATGATTCAAATTTATATTCCATGATTTTTCAATTTTTCAATCTGCCCCTAAGTTTTTGGAGATTTGTAGCTATTAAGTCCTTCAAACTTTAAAAATTACAACTTAATTGTAACGACCCAGATACACCGCGGTTAGATATTATCCTCTTTGGACCTCCTCGGCTTTAAAATGCATCTGCTAAGGTTAGGTTTTCACACTCTTTGGACCTCCTCGGCTTTAAAATGCATCTGCTAAGGGAAGGTTTTCACACTCTTACAAAGGGTGGTTTGTCCTCCTCCTCCCAATCATCGTGGGCTTTCCCTTTTGGGCTTCACCTCGAGGCTTTAAAACGCGTCGGCGAGGGGAAGGTTTACCCACCCTAAGATGGCGCATCCCTTAAATTTTAGAAATATTATTTTAGAAATATATAATTAAACATATAATTACACACCTAACAATTTAGTTTATATATTTTTAAATTTATAATAATTTAATCTTGAACAATCGAACAAAAATTAATTTGTACATCGATGAACTTATAAATCATTGCTAATTTTAAAGTACAGAGATCAAATTATTACAAAACTAAAACTAAAATTAGGTACTAAAATTTAAGGACTAAATTGTTATTTTCCGAAAATCGAAGCATTTTTTAATACTAAGTTCAAGTTTAATTGAAAGTTTAAGAACATTTTAAAAATAATCAAACAAACATTTTTTTAACATTAAGATCATGGAAATTGGAAGTTCAAAAACATTCTTAGAACAATCAAACAAACATAAACTAATATATTACCAAAATGACTTTTATGTTTCAAATTTGCAACAAACATGAACTAAGAACATGCTAGTTTCCCTCCATGAACAAAATTCAAATAAATTTTGAGGCTTAGATCAGTCTTAAAAGCATCATAAGAGGGAGGTTCGTAGCTCAAACCTGCTTGTTTTGAATGCAGTTTTGGGATTTCCGGTGGGATCAAATAGTCCCGGATCAGCCCCAGCCCCAGCACCAGGACCAGGTAATAAATCTTCCATACTCTACATTCTAAGTTCATGGTTTGAGTTTATTCTGAACGAAAATTTCGAATGTTAAAACGCACCTAGGTGTTCAACCACTGGACGATGGAGGCTCCGCCACCCCCGGTACCCCGGGAAGCAGCGGGAATAGGGCTTCGAGCATCAACCGCCTTCATCTCGCATTTCCGCTTGGCATAGCCTTAGGATTTCTTTCGACGCTTCTCTAACCGAGATATCTTTGATTGTCTGTTATTGTTTGCCAATTCTTCTGTCTTTCCTTTTCAGTTCATATGTAGTATTGTACTGAGATATTTTCATGATTGTTAGGCAATAAAATGTTAGTTTCTATTGAAATATTTTGTTGAAACTACCTGTTCTTGTGGCTTGTAAAAAGTGCATGTTTCTGTGATGGTGAAGATTGGAAAAACAAGTTTTAGAGGGTAGCAAGAAGACATTACCAGGTAAGTAGAGACGATAGCAACGCCATCGACATTTTGTATGCATATTATCCACTGCTCATGGAACAAATATTGGGGAAATGGATCAACAATCCTCAAAGTTCTCATCTCTAGACAAAATG TGGCGAAAAAAATAGGTGGGGTCATTATTAGGAGGTAGATAAATAACTAAAAGAAATAAATAGGGCCTTGGGAGTTGGGAGGGGGCCCACTCTCACACAGAAAATTAAAAAAAAAAAAAAAAACAAAATAAAAACAAAAAACAAAAAAGAGAAATAAATAAGCAATCAAAGTCCTGCAATGGCGGTAGCTGCTGCCATTAATTCACACTCGCCTTCCTCTTCCCAAACCACTTCCCTTCTTCTCTCTCTCTCTCTCTCTATATATCTCTCTCCTCCTCCTCCTCCTCTTCTCTTCAATTCCACCGCCAACCAACTCAAACCCTAGAAAACGAAACAACCGTCTCGATCTACACCAATGGCGACGCCTTCGATCTGCGCGCTAGCGGCGGTGATAATCGCGATTCACGGCATTGCAGGGGCGGTGGCGCAGGCTCCGGCGCCGGGGCCAGCGGTTGCGACGGACTGCTTCACGACGCTGCTGAATATGTCGGATTGCCTGTCGTACGTGTCGGCGGGGAGCAAGGACGTGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTGGTGGAGAGTAGCCCTAGCTGCCTCTGTCAGCTGCTTAGCGATCCTAATAAAGTTGGGTTAACCATTGATGTCGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACCCCTCCCGTTAATCTCTGCTCTCTTTTGGGATTTCCGGTGGGATCAAATAGTCCCGGATCAGCCCCAGCCCCAGCACCAGGACCAGGTGTTCAACCACTGGACGATGGAGGCTCCGCCACCCCCGGTACCCCGGGAAGCAGCGGGAATAGGGCTTCGAGCATCAACCGCCTTCATCTCGCATTTCCGCTTGGCATAGCCTTAGGATTTCTTTCGACGCTTCTCTAACCGAGATATCTTTGATTGTCTGTTATTGTTTGCCAATTCTTCTGTCTTTCCTTTTCAGTTCATATGTAGTATTGTACTGAGATATTTTCATGATTGTTAGGCAATAAAATGTTAGTTTCTATTGAAATATTTTGTTGAAACTACCTGTTCTTGTGGCTTGTAAAAAGTGCATGTTTCTGTGATGGTGAAGATTGGAAAAACAAGTTTTAGAGGGTAGCAAGAAGACATTACCAGGTAAGTAGAGACGATAGCAACGCCATCGACATTTTGTATGCATATTATCCACTGCTCATGGAACAAATATTGGGGAAATGGATCAACAATCCTCAAAGTTCTCATCTCTAGACAAAATG ATGGCGACGCCTTCGATCTGCGCGCTAGCGGCGGTGATAATCGCGATTCACGGCATTGCAGGGGCGGTGGCGCAGGCTCCGGCGCCGGGGCCAGCGGTTGCGACGGACTGCTTCACGACGCTGCTGAATATGTCGGATTGCCTGTCGTACGTGTCGGCGGGGAGCAAGGACGTGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTGGTGGAGAGTAGCCCTAGCTGCCTCTGTCAGCTGCTTAGCGATCCTAATAAAGTTGGGTTAACCATTGATGTCGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACCCCTCCCGTTAATCTCTGCTCTCTTTTGGGATTTCCGGTGGGATCAAATAGTCCCGGATCAGCCCCAGCCCCAGCACCAGGACCAGGTGTTCAACCACTGGACGATGGAGGCTCCGCCACCCCCGGTACCCCGGGAAGCAGCGGGAATAGGGCTTCGAGCATCAACCGCCTTCATCTCGCATTTCCGCTTGGCATAGCCTTAGGATTTCTTTCGACGCTTCTCTAA MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLSTLL Homology
BLAST of Cp4.1LG18g01220 vs. ExPASy Swiss-Prot
Match: Q9LZH5 (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=3702 GN=LTPG2 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23 Identity = 71/171 (41.52%), Postives = 99/171 (57.89%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.7e-19 Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. ExPASy Swiss-Prot
Match: Q9ZVC7 (Non-specific lipid transfer protein GPI-anchored 12 OS=Arabidopsis thaliana OX=3702 GN=LTPG12 PE=2 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 2.1e-17 Identity = 64/189 (33.86%), Postives = 97/189 (51.32%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.6e-15 Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.6e-15 Identity = 52/171 (30.41%), Postives = 89/171 (52.05%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. NCBI nr
Match: XP_023516231.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 354 bits (908), Expect = 7.02e-123 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. NCBI nr
Match: XP_022960576.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita moschata]) HSP 1 Score: 346 bits (887), Expect = 1.12e-119 Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. NCBI nr
Match: KAG6590254.1 (Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 345 bits (884), Expect = 3.21e-119 Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. NCBI nr
Match: KAG7033464.1 (Non-specific lipid transfer protein GPI-anchored 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 343 bits (880), Expect = 1.31e-118 Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. NCBI nr
Match: XP_022988217.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita maxima]) HSP 1 Score: 339 bits (870), Expect = 5.21e-117 Identity = 177/183 (96.72%), Postives = 178/183 (97.27%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. ExPASy TrEMBL
Match: A0A6J1H7Z8 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita moschata OX=3662 GN=LOC111461313 PE=4 SV=1) HSP 1 Score: 346 bits (887), Expect = 5.41e-120 Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. ExPASy TrEMBL
Match: A0A6J1JCG9 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485521 PE=4 SV=1) HSP 1 Score: 339 bits (870), Expect = 2.52e-117 Identity = 177/183 (96.72%), Postives = 178/183 (97.27%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. ExPASy TrEMBL
Match: A0A1S3BRS5 (non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1) HSP 1 Score: 238 bits (606), Expect = 2.57e-77 Identity = 127/177 (71.75%), Postives = 141/177 (79.66%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. ExPASy TrEMBL
Match: A0A1S3BRF5 (non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1) HSP 1 Score: 237 bits (604), Expect = 5.54e-77 Identity = 127/177 (71.75%), Postives = 142/177 (80.23%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. ExPASy TrEMBL
Match: A0A0A0M2I0 (Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G600910 PE=4 SV=1) HSP 1 Score: 220 bits (561), Expect = 2.20e-70 Identity = 117/173 (67.63%), Postives = 137/173 (79.19%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. TAIR 10
Match: AT3G43720.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 111.3 bits (277), Expect = 8.2e-25 Identity = 71/171 (41.52%), Postives = 99/171 (57.89%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. TAIR 10
Match: AT3G43720.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-24 Identity = 78/189 (41.27%), Postives = 106/189 (56.08%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20 Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. TAIR 10
Match: AT2G27130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18 Identity = 64/189 (33.86%), Postives = 97/189 (51.32%), Query Frame = 0
BLAST of Cp4.1LG18g01220 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 90.1 bits (222), Expect = 2.0e-18 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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