Cp4.1LG18g01220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG18g01220
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionnon-specific lipid transfer protein GPI-anchored 2-like
LocationCp4.1LG18: 2782042 .. 2784454 (-)
RNA-Seq ExpressionCp4.1LG18g01220
SyntenyCp4.1LG18g01220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGCGAAAAAAATAGGTGGGGTCATTATTAGGAGGTAGATAAATAACTAAAAGAAATAAATAGGGCCTTGGGAGTTGGGAGGGGGCCCACTCTCACACAGAAAATTAAAAAAAAAAAAAAAAACAAAATAAAAACAAAAAACAAAAAAGAGAAATAAATAAGCAATCAAAGTCCTGCAATGGCGGTAGCTGCTGCCATTAATTCACACTCGCCTTCCTCTTCCCAAACCACTTCCCTTCTTCTCTCTCTCTCTCTCTCTATATATCTCTCTCCTCCTCCTCCTCCTCTTCTCTTCAATTCCACCGCCAACCAACTCAAACCCTAGAAAACGAAACAACCGTCTCGATCTACACCAATGGCGACGCCTTCGATCTGCGCGCTAGCGGCGGTGATAATCGCGATTCACGGCATTGCAGGGGCGGTGGCGCAGGCTCCGGCGCCGGGGCCAGCGGTTGCGACGGACTGCTTCACGACGCTGCTGAATATGTCGGATTGCCTGTCGTACGTGTCGGCGGGGAGCAAGGACGTGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTGGTGGAGAGTAGCCCTAGCTGCCTCTGTCAGCTGCTTAGCGATCCTAATAAAGTTGGGTTAACCATTGATGTCGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACCCCTCCCGTTAATCTCTGCTCTCGTAAGCTTTCTTTTCCCTTTCCTTAAATAAAAAATTAAAAAATTAAAAAAATTAAAATTAAAATTAAAATGAATCTTTTTAAAATACCCAATTTAATCTTTTTTTTTCTTCTTTTTAATGGAAATTTTCAATTATGATTCAAATTTATATTCCATGATTTTTCAATTTTTCAATCTGCCCCTAAGTTTTTGGAGATTTGTAGCTATTAAGTCCTTCAAACTTTAAAAATTACAACTTAATTGTAACGACCCAGATACACCGCGGTTAGATATTATCCTCTTTGGACCTCCTCGGCTTTAAAATGCATCTGCTAAGGTTAGGTTTTCACACTCTTTGGACCTCCTCGGCTTTAAAATGCATCTGCTAAGGGAAGGTTTTCACACTCTTACAAAGGGTGGTTTGTCCTCCTCCTCCCAATCATCGTGGGCTTTCCCTTTTGGGCTTCACCTCGAGGCTTTAAAACGCGTCGGCGAGGGGAAGGTTTACCCACCCTAAGATGGCGCATCCCTTAAATTTTAGAAATATTATTTTAGAAATATATAATTAAACATATAATTACACACCTAACAATTTAGTTTATATATTTTTAAATTTATAATAATTTAATCTTGAACAATCGAACAAAAATTAATTTGTACATCGATGAACTTATAAATCATTGCTAATTTTAAAGTACAGAGATCAAATTATTACAAAACTAAAACTAAAATTAGGTACTAAAATTTAAGGACTAAATTGTTATTTTCCGAAAATCGAAGCATTTTTTAATACTAAGTTCAAGTTTAATTGAAAGTTTAAGAACATTTTAAAAATAATCAAACAAACATTTTTTTAACATTAAGATCATGGAAATTGGAAGTTCAAAAACATTCTTAGAACAATCAAACAAACATAAACTAATATATTACCAAAATGACTTTTATGTTTCAAATTTGCAACAAACATGAACTAAGAACATGCTAGTTTCCCTCCATGAACAAAATTCAAATAAATTTTGAGGCTTAGATCAGTCTTAAAAGCATCATAAGAGGGAGGTTCGTAGCTCAAACCTGCTTGTTTTGAATGCAGTTTTGGGATTTCCGGTGGGATCAAATAGTCCCGGATCAGCCCCAGCCCCAGCACCAGGACCAGGTAATAAATCTTCCATACTCTACATTCTAAGTTCATGGTTTGAGTTTATTCTGAACGAAAATTTCGAATGTTAAAACGCACCTAGGTGTTCAACCACTGGACGATGGAGGCTCCGCCACCCCCGGTACCCCGGGAAGCAGCGGGAATAGGGCTTCGAGCATCAACCGCCTTCATCTCGCATTTCCGCTTGGCATAGCCTTAGGATTTCTTTCGACGCTTCTCTAACCGAGATATCTTTGATTGTCTGTTATTGTTTGCCAATTCTTCTGTCTTTCCTTTTCAGTTCATATGTAGTATTGTACTGAGATATTTTCATGATTGTTAGGCAATAAAATGTTAGTTTCTATTGAAATATTTTGTTGAAACTACCTGTTCTTGTGGCTTGTAAAAAGTGCATGTTTCTGTGATGGTGAAGATTGGAAAAACAAGTTTTAGAGGGTAGCAAGAAGACATTACCAGGTAAGTAGAGACGATAGCAACGCCATCGACATTTTGTATGCATATTATCCACTGCTCATGGAACAAATATTGGGGAAATGGATCAACAATCCTCAAAGTTCTCATCTCTAGACAAAATG

mRNA sequence

TGGCGAAAAAAATAGGTGGGGTCATTATTAGGAGGTAGATAAATAACTAAAAGAAATAAATAGGGCCTTGGGAGTTGGGAGGGGGCCCACTCTCACACAGAAAATTAAAAAAAAAAAAAAAAACAAAATAAAAACAAAAAACAAAAAAGAGAAATAAATAAGCAATCAAAGTCCTGCAATGGCGGTAGCTGCTGCCATTAATTCACACTCGCCTTCCTCTTCCCAAACCACTTCCCTTCTTCTCTCTCTCTCTCTCTCTATATATCTCTCTCCTCCTCCTCCTCCTCTTCTCTTCAATTCCACCGCCAACCAACTCAAACCCTAGAAAACGAAACAACCGTCTCGATCTACACCAATGGCGACGCCTTCGATCTGCGCGCTAGCGGCGGTGATAATCGCGATTCACGGCATTGCAGGGGCGGTGGCGCAGGCTCCGGCGCCGGGGCCAGCGGTTGCGACGGACTGCTTCACGACGCTGCTGAATATGTCGGATTGCCTGTCGTACGTGTCGGCGGGGAGCAAGGACGTGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTGGTGGAGAGTAGCCCTAGCTGCCTCTGTCAGCTGCTTAGCGATCCTAATAAAGTTGGGTTAACCATTGATGTCGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACCCCTCCCGTTAATCTCTGCTCTCTTTTGGGATTTCCGGTGGGATCAAATAGTCCCGGATCAGCCCCAGCCCCAGCACCAGGACCAGGTGTTCAACCACTGGACGATGGAGGCTCCGCCACCCCCGGTACCCCGGGAAGCAGCGGGAATAGGGCTTCGAGCATCAACCGCCTTCATCTCGCATTTCCGCTTGGCATAGCCTTAGGATTTCTTTCGACGCTTCTCTAACCGAGATATCTTTGATTGTCTGTTATTGTTTGCCAATTCTTCTGTCTTTCCTTTTCAGTTCATATGTAGTATTGTACTGAGATATTTTCATGATTGTTAGGCAATAAAATGTTAGTTTCTATTGAAATATTTTGTTGAAACTACCTGTTCTTGTGGCTTGTAAAAAGTGCATGTTTCTGTGATGGTGAAGATTGGAAAAACAAGTTTTAGAGGGTAGCAAGAAGACATTACCAGGTAAGTAGAGACGATAGCAACGCCATCGACATTTTGTATGCATATTATCCACTGCTCATGGAACAAATATTGGGGAAATGGATCAACAATCCTCAAAGTTCTCATCTCTAGACAAAATG

Coding sequence (CDS)

ATGGCGACGCCTTCGATCTGCGCGCTAGCGGCGGTGATAATCGCGATTCACGGCATTGCAGGGGCGGTGGCGCAGGCTCCGGCGCCGGGGCCAGCGGTTGCGACGGACTGCTTCACGACGCTGCTGAATATGTCGGATTGCCTGTCGTACGTGTCGGCGGGGAGCAAGGACGTGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTGGTGGAGAGTAGCCCTAGCTGCCTCTGTCAGCTGCTTAGCGATCCTAATAAAGTTGGGTTAACCATTGATGTCGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACCCCTCCCGTTAATCTCTGCTCTCTTTTGGGATTTCCGGTGGGATCAAATAGTCCCGGATCAGCCCCAGCCCCAGCACCAGGACCAGGTGTTCAACCACTGGACGATGGAGGCTCCGCCACCCCCGGTACCCCGGGAAGCAGCGGGAATAGGGCTTCGAGCATCAACCGCCTTCATCTCGCATTTCCGCTTGGCATAGCCTTAGGATTTCTTTCGACGCTTCTCTAA

Protein sequence

MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLSTLL
Homology
BLAST of Cp4.1LG18g01220 vs. ExPASy Swiss-Prot
Match: Q9LZH5 (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=3702 GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 71/171 (41.52%), Postives = 99/171 (57.89%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHG-IAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKD-- 60
           M+   + A+  ++ ++ G ++  +  +P+ GP+ A DC   L+NM+ CLSYV+ G     
Sbjct: 1   MSNVVVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGA 60

Query: 61  VKPDKHCCPELAGLVESSPSCLCQLLSD--PNKVGLTIDVDRAMKLPSACNVSTPPVNLC 120
            KPDK CCP LAGLVESSP CLC LLS     ++G+ ID  +A+KLP  C V TP  +LC
Sbjct: 61  AKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLC 120

Query: 121 SLLGFPVGS----NSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASS 163
           SL G PVG+       G++PA APG  +   +  G    G   S G+ A S
Sbjct: 121 SLFGIPVGAPVAMGDEGASPAYAPG-SMSGAESPGGFGSGPSASRGSDAPS 170

BLAST of Cp4.1LG18g01220 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-19
Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 0

Query: 34  ATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESSPSCLCQLLSDPNKVGLTI 93
           A DC + +LNM+DCLS+V++GS  VKP+  CC  L  +V + P CLC+   +   +GLT+
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 94  DVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAP--APAPGPGVQPLDDGGSATPG 153
           D+ +A  LPS C V+ PP   C   G  V  + P +AP  +P  G G   L  G +A   
Sbjct: 84  DLSKAASLPSVCKVAAPPSARC---GLSVSGDPPATAPGLSPTAGAGAPALSSGANA--A 143

Query: 154 TPGSSGNRASSINRLHLAFPLGIALGFLST 182
           TP SS  R+S  + L ++F   I +  +S+
Sbjct: 144 TPVSS-PRSSDASLLSVSFAFVIFMALISS 167

BLAST of Cp4.1LG18g01220 vs. ExPASy Swiss-Prot
Match: Q9ZVC7 (Non-specific lipid transfer protein GPI-anchored 12 OS=Arabidopsis thaliana OX=3702 GN=LTPG12 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-17
Identity = 64/189 (33.86%), Postives = 97/189 (51.32%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHGIAGAVAQAPAP----GPAVATDCFTTLLNMSDCLSYVSAGSK 60
           + T ++  L  + +++   +G    AP P    GP+   +C  ++LN+SDC SYV  GS 
Sbjct: 2   LTTNTLAVLLLLFLSL--CSGQSPPAPEPIAADGPSSPVNCLVSMLNVSDCFSYVQVGSN 61

Query: 61  DVKPDKHCCPELAGLVESSPSCLCQLLSD--PNKVGLTIDVDRAMKLPSACNVSTPPVNL 120
           ++KP+  CCPELAG+V+SSP C+C L       + G+ +D  RA +L + C V  P  +L
Sbjct: 62  EIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSL 121

Query: 121 CSLLGFPVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGI 180
           CS+LGFP  S      PA +        +D  S + G+     N A +          G+
Sbjct: 122 CSVLGFPTIS------PAGS--------EDSSSGSEGSDKDKKNGAMTTKY------CGV 168

Query: 181 ALGFLSTLL 184
           AL  L+ LL
Sbjct: 182 ALNSLALLL 168

BLAST of Cp4.1LG18g01220 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.6e-15
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 0

Query: 6   ICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCC 65
           I  L+   +++ G +   A APAP    + DC T +LNM+DCLS+VS+G    KP+  CC
Sbjct: 16  IVLLSLSSVSVLGASHHHATAPAP----SVDCSTLILNMADCLSFVSSGGTVAKPEGTCC 75

Query: 66  PELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSN 125
             L  ++++   CLC+       +G+T+++ +A  LP+AC +  P +  C L      S 
Sbjct: 76  SGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGL------SV 135

Query: 126 SPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSI 164
           +P +AP  APG      +  G   P    SSGN  SS+
Sbjct: 136 APSTAPGLAPGVAAAGPETAGFLAPNP--SSGNDGSSL 161

BLAST of Cp4.1LG18g01220 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.6e-15
Identity = 52/171 (30.41%), Postives = 89/171 (52.05%), Query Frame = 0

Query: 26  APAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESSPSCLCQLLSD 85
           APAPGP+ ++DC T + +M DCL Y+  GS + KP+K CC  +  +++ +P C+C  L  
Sbjct: 38  APAPGPS-SSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVS 97

Query: 86  PNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAP------APAPGPGV 145
             ++G+ ++  RA+  P AC +S  P + C ++    G+ +PG++P      AP   P  
Sbjct: 98  AGEMGIELNSTRALATPKACKLSIAPPH-CGII--TSGATTPGASPVSPSAGAPTTSPSA 157

Query: 146 ----------QPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS 181
                        D+  S T  +P SSG    S+  L + F +  ++ ++S
Sbjct: 158 AKSPETSATSPSSDETPSMTAPSPSSSGTNILSVPALTIVFVIVSSVAYIS 204

BLAST of Cp4.1LG18g01220 vs. NCBI nr
Match: XP_023516231.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354 bits (908), Expect = 7.02e-123
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60
           MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP
Sbjct: 1   MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60

Query: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120
           DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF
Sbjct: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120

Query: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180
           PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS
Sbjct: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180

Query: 181 TLL 183
           TLL
Sbjct: 181 TLL 183

BLAST of Cp4.1LG18g01220 vs. NCBI nr
Match: XP_022960576.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita moschata])

HSP 1 Score: 346 bits (887), Expect = 1.12e-119
Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60
           MATPSI ALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP
Sbjct: 1   MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60

Query: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120
           DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF
Sbjct: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120

Query: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180
           PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAF LGIALGFLS
Sbjct: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLS 180

Query: 181 TLL 183
           TLL
Sbjct: 181 TLL 183

BLAST of Cp4.1LG18g01220 vs. NCBI nr
Match: KAG6590254.1 (Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345 bits (884), Expect = 3.21e-119
Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60
           MATPS+ ALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP
Sbjct: 1   MATPSMFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60

Query: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120
           DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF
Sbjct: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120

Query: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180
           PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAF LGIALGFLS
Sbjct: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLS 180

Query: 181 TLL 183
           TLL
Sbjct: 181 TLL 183

BLAST of Cp4.1LG18g01220 vs. NCBI nr
Match: KAG7033464.1 (Non-specific lipid transfer protein GPI-anchored 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343 bits (880), Expect = 1.31e-118
Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60
           MATPSI ALAAV+IAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP
Sbjct: 1   MATPSIFALAAVLIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60

Query: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120
           DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF
Sbjct: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120

Query: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180
           PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSIN LHLAF LGIALGFLS
Sbjct: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINHLHLAFLLGIALGFLS 180

Query: 181 TLL 183
           TLL
Sbjct: 181 TLL 183

BLAST of Cp4.1LG18g01220 vs. NCBI nr
Match: XP_022988217.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita maxima])

HSP 1 Score: 339 bits (870), Expect = 5.21e-117
Identity = 177/183 (96.72%), Postives = 178/183 (97.27%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60
           MATPSI ALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKD KP
Sbjct: 1   MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDAKP 60

Query: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120
           DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF
Sbjct: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120

Query: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180
           PVGSNSP SAPAPAPGPGVQP D+GGSA PGTPGSSGNRASSINRLHLAFPLGIALGFLS
Sbjct: 121 PVGSNSPASAPAPAPGPGVQPQDNGGSAIPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180

Query: 181 TLL 183
           TLL
Sbjct: 181 TLL 183

BLAST of Cp4.1LG18g01220 vs. ExPASy TrEMBL
Match: A0A6J1H7Z8 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita moschata OX=3662 GN=LOC111461313 PE=4 SV=1)

HSP 1 Score: 346 bits (887), Expect = 5.41e-120
Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60
           MATPSI ALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP
Sbjct: 1   MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60

Query: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120
           DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF
Sbjct: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120

Query: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180
           PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAF LGIALGFLS
Sbjct: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLS 180

Query: 181 TLL 183
           TLL
Sbjct: 181 TLL 183

BLAST of Cp4.1LG18g01220 vs. ExPASy TrEMBL
Match: A0A6J1JCG9 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485521 PE=4 SV=1)

HSP 1 Score: 339 bits (870), Expect = 2.52e-117
Identity = 177/183 (96.72%), Postives = 178/183 (97.27%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60
           MATPSI ALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKD KP
Sbjct: 1   MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDAKP 60

Query: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120
           DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF
Sbjct: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120

Query: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180
           PVGSNSP SAPAPAPGPGVQP D+GGSA PGTPGSSGNRASSINRLHLAFPLGIALGFLS
Sbjct: 121 PVGSNSPASAPAPAPGPGVQPQDNGGSAIPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180

Query: 181 TLL 183
           TLL
Sbjct: 181 TLL 183

BLAST of Cp4.1LG18g01220 vs. ExPASy TrEMBL
Match: A0A1S3BRS5 (non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1)

HSP 1 Score: 238 bits (606), Expect = 2.57e-77
Identity = 127/177 (71.75%), Postives = 141/177 (79.66%), Query Frame = 0

Query: 6   ICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCC 65
           I ALA   +AI GI+G   QAPAPGPA   DCFTTLLNMSDCLSYV+AGS D KP+K CC
Sbjct: 7   ILALAVATMAIEGISG---QAPAPGPAGEVDCFTTLLNMSDCLSYVTAGSNDTKPNKQCC 66

Query: 66  PELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSN 125
            ELAGLVESSP CLC+LLSDP+KVGLTIDVDRAMKLPS C +STPP++LCSLLGFPVGS+
Sbjct: 67  SELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGFPVGSS 126

Query: 126 SPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLSTL 182
                  PAP PGVQP D GGS+T  TPG+ GNRASSIN L LAFPLG+AL F+  L
Sbjct: 127 -------PAPSPGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPAL 173

BLAST of Cp4.1LG18g01220 vs. ExPASy TrEMBL
Match: A0A1S3BRF5 (non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1)

HSP 1 Score: 237 bits (604), Expect = 5.54e-77
Identity = 127/177 (71.75%), Postives = 142/177 (80.23%), Query Frame = 0

Query: 6   ICALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCC 65
           I ALA   +AI GI+G   QAPAPGPA   DCFTTLLNMSDCLSYV+AGS D KP+K CC
Sbjct: 7   ILALAVATMAIEGISG---QAPAPGPAGEVDCFTTLLNMSDCLSYVTAGSNDTKPNKQCC 66

Query: 66  PELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSN 125
            ELAGLVESSP CLC+LLSDP+KVGLTIDVDRAMKLPS C +STPP++LCSLLGFPVGS+
Sbjct: 67  SELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGFPVGSS 126

Query: 126 SPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLSTL 182
                PAP+P  GVQP D GGS+T  TPG+ GNRASSIN L LAFPLG+AL F+  L
Sbjct: 127 -----PAPSPDLGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPAL 175

BLAST of Cp4.1LG18g01220 vs. ExPASy TrEMBL
Match: A0A0A0M2I0 (Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G600910 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 2.20e-70
Identity = 117/173 (67.63%), Postives = 137/173 (79.19%), Query Frame = 0

Query: 12  VIIAIHGIAGAVAQAPAPGPAVA--TDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELA 71
           VI+AI GI+G   QAPAPGP      DCFTTLL MSDCL YV+ GS D KP+K CC ELA
Sbjct: 15  VIMAIEGISG---QAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELA 74

Query: 72  GLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGS 131
           GLVE+SP CLC+LLSDP+KVG TIDVDRAMKLP+ C+VSTP ++LCSLLG+PVGS++   
Sbjct: 75  GLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSN--- 134

Query: 132 APAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLSTL 182
             +PAP PGVQP D GGS+T  TPG+SGNRASSI+ L LAFPLG+AL F+  L
Sbjct: 135 --SPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPAL 179

BLAST of Cp4.1LG18g01220 vs. TAIR 10
Match: AT3G43720.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 8.2e-25
Identity = 71/171 (41.52%), Postives = 99/171 (57.89%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHG-IAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKD-- 60
           M+   + A+  ++ ++ G ++  +  +P+ GP+ A DC   L+NM+ CLSYV+ G     
Sbjct: 1   MSNVVVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGA 60

Query: 61  VKPDKHCCPELAGLVESSPSCLCQLLSD--PNKVGLTIDVDRAMKLPSACNVSTPPVNLC 120
            KPDK CCP LAGLVESSP CLC LLS     ++G+ ID  +A+KLP  C V TP  +LC
Sbjct: 61  AKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLC 120

Query: 121 SLLGFPVGS----NSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASS 163
           SL G PVG+       G++PA APG  +   +  G    G   S G+ A S
Sbjct: 121 SLFGIPVGAPVAMGDEGASPAYAPG-SMSGAESPGGFGSGPSASRGSDAPS 170

BLAST of Cp4.1LG18g01220 vs. TAIR 10
Match: AT3G43720.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-24
Identity = 78/189 (41.27%), Postives = 106/189 (56.08%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHG-IAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKD-- 60
           M+   + A+  ++ ++ G ++  +  +P+ GP+ A DC   L+NM+ CLSYV+ G     
Sbjct: 1   MSNVVVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGA 60

Query: 61  VKPDKHCCPELAGLVESSPSCLCQLLSD--PNKVGLTIDVDRAMKLPSACNVSTPPVNLC 120
            KPDK CCP LAGLVESSP CLC LLS     ++G+ ID  +A+KLP  C V TP  +LC
Sbjct: 61  AKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLC 120

Query: 121 SLLGFPVGS----NSPGSAPAPAPG-----PGVQPLDDGGSATPGTPGSSGNRASSINRL 176
           SL G PVG+       G++PA APG     PG      G SA+ G+   S    S    L
Sbjct: 121 SLFGIPVGAPVAMGDEGASPAYAPGSMSESPG--GFGSGPSASRGSDAPSSAPYSLFLNL 180

BLAST of Cp4.1LG18g01220 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20
Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 0

Query: 34  ATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESSPSCLCQLLSDPNKVGLTI 93
           A DC + +LNM+DCLS+V++GS  VKP+  CC  L  +V + P CLC+   +   +GLT+
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 94  DVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAP--APAPGPGVQPLDDGGSATPG 153
           D+ +A  LPS C V+ PP   C   G  V  + P +AP  +P  G G   L  G +A   
Sbjct: 84  DLSKAASLPSVCKVAAPPSARC---GLSVSGDPPATAPGLSPTAGAGAPALSSGANA--A 143

Query: 154 TPGSSGNRASSINRLHLAFPLGIALGFLST 182
           TP SS  R+S  + L ++F   I +  +S+
Sbjct: 144 TPVSS-PRSSDASLLSVSFAFVIFMALISS 167

BLAST of Cp4.1LG18g01220 vs. TAIR 10
Match: AT2G27130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18
Identity = 64/189 (33.86%), Postives = 97/189 (51.32%), Query Frame = 0

Query: 1   MATPSICALAAVIIAIHGIAGAVAQAPAP----GPAVATDCFTTLLNMSDCLSYVSAGSK 60
           + T ++  L  + +++   +G    AP P    GP+   +C  ++LN+SDC SYV  GS 
Sbjct: 2   LTTNTLAVLLLLFLSL--CSGQSPPAPEPIAADGPSSPVNCLVSMLNVSDCFSYVQVGSN 61

Query: 61  DVKPDKHCCPELAGLVESSPSCLCQLLSD--PNKVGLTIDVDRAMKLPSACNVSTPPVNL 120
           ++KP+  CCPELAG+V+SSP C+C L       + G+ +D  RA +L + C V  P  +L
Sbjct: 62  EIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSL 121

Query: 121 CSLLGFPVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGI 180
           CS+LGFP  S      PA +        +D  S + G+     N A +          G+
Sbjct: 122 CSVLGFPTIS------PAGS--------EDSSSGSEGSDKDKKNGAMTTKY------CGV 168

Query: 181 ALGFLSTLL 184
           AL  L+ LL
Sbjct: 182 ALNSLALLL 168

BLAST of Cp4.1LG18g01220 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-18
Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 0

Query: 34  ATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESSPSCLCQLLSDPNKVGLTI 93
           A DC + +LNM+DCLS+V++GS  VKP+  CC  L  +V + P CLC+   +   +GLT+
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 94  DVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAPAPAPG 137
           D+ +A  LPS C V+ PP   C       G +  G  PA APG
Sbjct: 84  DLSKAASLPSVCKVAAPPSARC-------GLSVSGDPPATAPG 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LZH51.2e-2341.52Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=37... [more]
Q9ZQI81.7e-1938.67Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3... [more]
Q9ZVC72.1e-1733.86Non-specific lipid transfer protein GPI-anchored 12 OS=Arabidopsis thaliana OX=3... [more]
Q8VYI92.6e-1534.18Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3... [more]
Q2PE702.6e-1530.41Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37... [more]
Match NameE-valueIdentityDescription
XP_023516231.17.02e-123100.00non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita pepo subsp. p... [more]
XP_022960576.11.12e-11998.91non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita moschata][more]
KAG6590254.13.21e-11998.36Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrospe... [more]
KAG7033464.11.31e-11897.81Non-specific lipid transfer protein GPI-anchored 2 [Cucurbita argyrosperma subsp... [more]
XP_022988217.15.21e-11796.72non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1H7Z85.41e-12098.91non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita moschata OX... [more]
A0A6J1JCG92.52e-11796.72non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita maxima OX=3... [more]
A0A1S3BRS52.57e-7771.75non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Cucumis melo OX... [more]
A0A1S3BRF55.54e-7771.75non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Cucumis melo OX... [more]
A0A0A0M2I02.20e-7067.63Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G600910 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G43720.18.2e-2541.52Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT3G43720.21.1e-2441.27Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G13820.11.2e-2038.67Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G27130.11.5e-1833.86Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G13820.22.0e-1842.72Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 37..115
e-value: 2.1E-4
score: 30.6
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 22..115
e-value: 1.4E-15
score: 57.2
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 34..112
e-value: 2.3E-16
score: 61.4
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 34..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..159
NoneNo IPR availablePANTHERPTHR33044:SF104NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 2coord: 12..181
NoneNo IPR availableCDDcd00010AAI_LTSScoord: 44..107
e-value: 8.41975E-13
score: 58.5923
IPR043325Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) ProteinPANTHERPTHR33044BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATEDcoord: 12..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g01220.1Cp4.1LG18g01220.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0005886 plasma membrane