Cp4.1LG18g00900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g00900
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	pentatricopeptide repeat-containing protein At3g18970
Location	Cp4.1LG18: 2298710 .. 2300156 (+)
RNA-Seq Expression	Cp4.1LG18g00900
Synteny	Cp4.1LG18g00900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGGTTCGAATTCAACCTCGCAGATGCGCCTATCGCCAAGACTGAGCTGCATCCATCACCTAAACAACATACTAAGCTCTTCCCTTCTTCAACTCAAACAAATTCACGCCCAATTGATCACCAATGCCTTCAAATCCCCCATCCCTTACGCCAAATTAATCGCCCATTTCTGCAACAACCATTCCCCCGAAGCCACCGCCTACGCCCATTTGATATCCCTGCACCACCGACACCCCACCAATCTCTTCCTCTTCAACACCCTCATAAGATGCGCTCCGCCTCAACATTCCATCTCCATTTTCGCCAATTCGGTCTCCACTGCTCACTTCGAATTCGACGATTTCACTTTCATTTTCCTGCTCGGAGCTTGCGCGCGGGCTCCATCGCCGCCGACGTTAACCACCGGCAAGCAGATTCATACTCATATTCTCAAACGTGGGGTTGTTTCAAACATTTGGGTGCAGACTACCATGATTCATTTTTACGCGATTAACAAAGATGTGGGTGCTGCACGGAAGGTGTTCGATGAAATGTCTGTGAGAAATAATGTTACCTGGAATGCGATGATTGCAGGGTACTGCTCACAAAGTGGAAGGGTGGCTCAGAAATATGGCCGAGAAGCGTTGGAATTGTTTCGAGGGATGTTGGTTGAATCAACGAATTCTGATGTCAATCCAACGGATACTACAATGGTCTGTCTTCTTTCTGCTGCATCTCAACTGGGTGTGCTTGAAACCGGCGTTTGTGTTCATGCATACATCGAGAAAACAATTGATTCCCCTGAAAATGATGTGTTTATTGGTACTGGTTTGGTTAATATGTACTCAAAATGTGGGTGTCTCAACAGTGCTTCATCAGTTTTTAAGCAGATGAAGCAGAGGAACGTTTTGACATGGACAGCGATGGCGACAGGGTTGGCCATTCATGGAAAGGGTAAAGAAGCATTGGAGCTTTTGGAAGCAATGGGAGGTCATGGTGTAAAGCCAAACGCAGTAACCTTCACAAGCCTGCTTTCTGGTTGCTGTCATGGTGGGCTTATTGAAGAGGGGCTCCATTTGTTTGATGTAATGGAGAGGAAGTTCGGTGTTGTGCCACAAATGCAGCATTATGGATGCATTGTTGACCTTCTTGGGCGCTGTGGGCACTTGAAAGAGGCATATGAGATGATACTTGGAATGCCAATGGCGCCTGATGGTGTGTTATGGAGGGGTTTGATGAGTTCTTGTATGGTTCATTGCGATGTTGAAATGGGAGAGAAGGTGGGGAAGTTCCTTGTGGAGAGTGTTGTTGGTGATGAGTGGTGTGATGGAAGTGAGGACTTTGTAGCTTTGTCGAATGTTTATGCTTCTGCTCAAAGGTGGGAGAATGTGAAGGCTGTAAGAGAGGAGATGAAGATCAAAGGGATTCAAAACAAACGGGGGTATAGTTCGGTTCAAACTAGGGGT

mRNA sequence

ATTGGGTTCGAATTCAACCTCGCAGATGCGCCTATCGCCAAGACTGAGCTGCATCCATCACCTAAACAACATACTAAGCTCTTCCCTTCTTCAACTCAAACAAATTCACGCCCAATTGATCACCAATGCCTTCAAATCCCCCATCCCTTACGCCAAATTAATCGCCCATTTCTGCAACAACCATTCCCCCGAAGCCACCGCCTACGCCCATTTGATATCCCTGCACCACCGACACCCCACCAATCTCTTCCTCTTCAACACCCTCATAAGATGCGCTCCGCCTCAACATTCCATCTCCATTTTCGCCAATTCGGTCTCCACTGCTCACTTCGAATTCGACGATTTCACTTTCATTTTCCTGCTCGGAGCTTGCGCGCGGGCTCCATCGCCGCCGACGTGGGAGAATGTGAAGGCTGTAAGAGAGGAGATGAAGATCAAAGGGATTCAAAACAAACGGGGGTATAGTTCGGTTCAAACTAGGGGT

Coding sequence (CDS)

ATGCGCCTATCGCCAAGACTGAGCTGCATCCATCACCTAAACAACATACTAAGCTCTTCCCTTCTTCAACTCAAACAAATTCACGCCCAATTGATCACCAATGCCTTCAAATCCCCCATCCCTTACGCCAAATTAATCGCCCATTTCTGCAACAACCATTCCCCCGAAGCCACCGCCTACGCCCATTTGATATCCCTGCACCACCGACACCCCACCAATCTCTTCCTCTTCAACACCCTCATAAGATGCGCTCCGCCTCAACATTCCATCTCCATTTTCGCCAATTCGGTCTCCACTGCTCACTTCGAATTCGACGATTTCACTTTCATTTTCCTGCTCGGAGCTTGCGCGCGGGCTCCATCGCCGCCGACGTGGGAGAATGTGAAGGCTGTAAGAGAGGAGATGAAGATCAAAGGGATTCAAAACAAACGGGGGTATAGTTCGGTTCAAACTAGGGGT

Protein sequence

MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAYAHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAPSPPTWENVKAVREEMKIKGIQNKRGYSSVQTRG

Homology

[Close]

BLAST of Cp4.1LG18g00900 vs. ExPASy Swiss-Prot
Match: Q9LJ69 (Pentatricopeptide repeat-containing protein At3g18970 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E93 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-15
Identity = 51/131 (38.93%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 18  SSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATA-YAHLISLHHRHPTNLFL 77
           S +L+Q KQIHAQL+ N       + KLI H+C+  S E+++  AHL+        + FL
Sbjct: 18  SKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFL 77

Query: 78  FNTLIRCAPPQHSISIFANSVSTAHFEF-DDFTFIFLLGACARAPSPPTWENVKAVREEM 137
           FNTL++C+ P+ SI IFAN  S +   + ++ TF+F+LGACAR+ S        A+R   
Sbjct: 78  FNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASS------SALRVGR 137

Query: 138 KIKGIQNKRGY 147
            + G+  K G+
Sbjct: 138 IVHGMVKKLGF 142

[Close]

BLAST of Cp4.1LG18g00900 vs. NCBI nr
Match: XP_023515866.1 (pentatricopeptide repeat-containing protein At3g18970 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255 bits (652), Expect = 1.65e-80
Identity = 126/140 (90.00%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60
           MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY
Sbjct: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60

Query: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120
           AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP
Sbjct: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120

Query: 121 SPPTWENVKAVREEMKIKGI 140
           SPPT    K +   +  +G+
Sbjct: 121 SPPTLTTGKQIHTHILKRGV 140

[Close]

BLAST of Cp4.1LG18g00900 vs. NCBI nr
Match: XP_022988094.1 (pentatricopeptide repeat-containing protein At3g18970 [Cucurbita maxima])

HSP 1 Score: 242 bits (618), Expect = 2.10e-75
Identity = 119/140 (85.00%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60
           M LSPRLSCIHHLNNIL+SSLLQLKQI AQLITNAFKSP PYAKLIAHFCN HSP+ATAY
Sbjct: 1   MHLSPRLSCIHHLNNILNSSLLQLKQIQAQLITNAFKSPSPYAKLIAHFCNKHSPQATAY 60

Query: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120
           AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANS+STAHFEFDDFTFIFLLGACARAP
Sbjct: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSLSTAHFEFDDFTFIFLLGACARAP 120

Query: 121 SPPTWENVKAVREEMKIKGI 140
           SPPT    K +   +  +G+
Sbjct: 121 SPPTLTTGKQIHTHVLKRGV 140

[Close]

BLAST of Cp4.1LG18g00900 vs. NCBI nr
Match: XP_022961040.1 (pentatricopeptide repeat-containing protein At3g18970 isoform X2 [Cucurbita moschata])

HSP 1 Score: 240 bits (612), Expect = 1.39e-74
Identity = 119/140 (85.00%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60
           M LSPRLSCIH LNNIL+SSLLQLKQIHAQLITNAFKSP PYAKLIAHFCN HSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120
           AH ISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHF+FDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTWENVKAVREEMKIKGI 140
           SPPT    K +   +  +G+
Sbjct: 121 SPPTLTTGKQIHTHILKRGV 140

[Close]

BLAST of Cp4.1LG18g00900 vs. NCBI nr
Match: XP_022961039.1 (pentatricopeptide repeat-containing protein At3g18970 isoform X1 [Cucurbita moschata])

HSP 1 Score: 240 bits (612), Expect = 1.67e-74
Identity = 119/140 (85.00%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60
           M LSPRLSCIH LNNIL+SSLLQLKQIHAQLITNAFKSP PYAKLIAHFCN HSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120
           AH ISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHF+FDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTWENVKAVREEMKIKGI 140
           SPPT    K +   +  +G+
Sbjct: 121 SPPTLTTGKQIHTHILKRGV 140

[Close]

BLAST of Cp4.1LG18g00900 vs. NCBI nr
Match: KAG6590314.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240 bits (612), Expect = 1.67e-74
Identity = 119/140 (85.00%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60
           M LSPRLSCIH LNNIL+SSLLQLKQIHAQLITNAFKSP PYAKLIAHFCN HSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120
           AH ISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHF+FDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTWENVKAVREEMKIKGI 140
           SPPT    K +   +  +G+
Sbjct: 121 SPPTLTTGKQIHTHILKRGV 140

[Close]

BLAST of Cp4.1LG18g00900 vs. ExPASy TrEMBL
Match: A0A6J1JKN4 (pentatricopeptide repeat-containing protein At3g18970 OS=Cucurbita maxima OX=3661 GN=LOC111485442 PE=4 SV=1)

HSP 1 Score: 242 bits (618), Expect = 1.02e-75
Identity = 119/140 (85.00%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60
           M LSPRLSCIHHLNNIL+SSLLQLKQI AQLITNAFKSP PYAKLIAHFCN HSP+ATAY
Sbjct: 1   MHLSPRLSCIHHLNNILNSSLLQLKQIQAQLITNAFKSPSPYAKLIAHFCNKHSPQATAY 60

Query: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120
           AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANS+STAHFEFDDFTFIFLLGACARAP
Sbjct: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSLSTAHFEFDDFTFIFLLGACARAP 120

Query: 121 SPPTWENVKAVREEMKIKGI 140
           SPPT    K +   +  +G+
Sbjct: 121 SPPTLTTGKQIHTHVLKRGV 140

[Close]

BLAST of Cp4.1LG18g00900 vs. ExPASy TrEMBL
Match: A0A6J1HAU4 (pentatricopeptide repeat-containing protein At3g18970 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461664 PE=4 SV=1)

HSP 1 Score: 240 bits (612), Expect = 6.74e-75
Identity = 119/140 (85.00%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60
           M LSPRLSCIH LNNIL+SSLLQLKQIHAQLITNAFKSP PYAKLIAHFCN HSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120
           AH ISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHF+FDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTWENVKAVREEMKIKGI 140
           SPPT    K +   +  +G+
Sbjct: 121 SPPTLTTGKQIHTHILKRGV 140

[Close]

BLAST of Cp4.1LG18g00900 vs. ExPASy TrEMBL
Match: A0A6J1HCU6 (pentatricopeptide repeat-containing protein At3g18970 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461664 PE=4 SV=1)

HSP 1 Score: 240 bits (612), Expect = 8.07e-75
Identity = 119/140 (85.00%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60
           M LSPRLSCIH LNNIL+SSLLQLKQIHAQLITNAFKSP PYAKLIAHFCN HSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120
           AH ISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHF+FDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTWENVKAVREEMKIKGI 140
           SPPT    K +   +  +G+
Sbjct: 121 SPPTLTTGKQIHTHILKRGV 140

[Close]

BLAST of Cp4.1LG18g00900 vs. ExPASy TrEMBL
Match: A0A0A0LZ63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573660 PE=4 SV=1)

HSP 1 Score: 181 bits (458), Expect = 9.03e-52
Identity = 94/140 (67.14%), Postives = 107/140 (76.43%), Query Frame = 0


Query: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60
           M L+PRLSCIHHL+N+  SSL QL QIHAQLITN FKSP PYAKLI H C   S E+ A+
Sbjct: 1   MHLAPRLSCIHHLSNVRISSL-QLLQIHAQLITNGFKSPSPYAKLITHLCKKSSSESIAH 60

Query: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120
           AHLI  HH++  NLFLFNTLIRCAPP HSISIFA  VST+HFEFDDFTFIF+LGACARAP
Sbjct: 61  AHLIFRHHQYSPNLFLFNTLIRCAPPHHSISIFATWVSTSHFEFDDFTFIFVLGACARAP 120

Query: 121 SPPTWENVKAVREEMKIKGI 140
           S  T    + +   +  +GI
Sbjct: 121 SVSTLMIGRQIHTHILKRGI 139

[Close]

BLAST of Cp4.1LG18g00900 vs. ExPASy TrEMBL
Match: A0A5D3CFP0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003250 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 1.48e-51
Identity = 95/140 (67.86%), Postives = 107/140 (76.43%), Query Frame = 0


Query: 1   MRLSPRLSCIHHLNNILSSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATAY 60
           M L+PRLSCI+HL+NI  SSL QL QIHAQ ITN FKSP PYAKLI H C   S E+ A+
Sbjct: 9   MHLAPRLSCINHLSNIRISSL-QLLQIHAQFITNGFKSPSPYAKLITHLCKKSSSESIAH 68

Query: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFEFDDFTFIFLLGACARAP 120
           AHLI  HH+H  NLFLFNTLIRCAPPQ+SISIFAN VST HFEFDDFTFIF+LGACARAP
Sbjct: 69  AHLIFRHHQHSPNLFLFNTLIRCAPPQYSISIFANWVSTPHFEFDDFTFIFVLGACARAP 128

Query: 121 SPPTWENVKAVREEMKIKGI 140
           S  T    + +   +  +GI
Sbjct: 129 SVSTLMIGRQIHTHILKRGI 147

[Close]

BLAST of Cp4.1LG18g00900 vs. TAIR 10
Match: AT3G18970.1 (mitochondrial editing factor 20 )

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-16
Identity = 51/131 (38.93%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 18  SSSLLQLKQIHAQLITNAFKSPIPYAKLIAHFCNNHSPEATA-YAHLISLHHRHPTNLFL 77
           S +L+Q KQIHAQL+ N       + KLI H+C+  S E+++  AHL+        + FL
Sbjct: 18  SKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFL 77

Query: 78  FNTLIRCAPPQHSISIFANSVSTAHFEF-DDFTFIFLLGACARAPSPPTWENVKAVREEM 137
           FNTL++C+ P+ SI IFAN  S +   + ++ TF+F+LGACAR+ S        A+R   
Sbjct: 78  FNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASS------SALRVGR 137

Query: 138 KIKGIQNKRGY 147
            + G+  K G+
Sbjct: 138 IVHGMVKKLGF 142

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g00900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ69	2.2e-15	38.93	Pentatricopeptide repeat-containing protein At3g18970 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cp4.1LG18g00900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515866.1	1.65e-80	90.00	pentatricopeptide repeat-containing protein At3g18970 [Cucurbita pepo subsp. pep...	[more]
XP_022988094.1	2.10e-75	85.00	pentatricopeptide repeat-containing protein At3g18970 [Cucurbita maxima]	[more]
XP_022961040.1	1.39e-74	85.00	pentatricopeptide repeat-containing protein At3g18970 isoform X2 [Cucurbita mosc...	[more]
XP_022961039.1	1.67e-74	85.00	pentatricopeptide repeat-containing protein At3g18970 isoform X1 [Cucurbita mosc...	[more]
KAG6590314.1	1.67e-74	85.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Cp4.1LG18g00900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JKN4	1.02e-75	85.00	pentatricopeptide repeat-containing protein At3g18970 OS=Cucurbita maxima OX=366...	[more]
A0A6J1HAU4	6.74e-75	85.00	pentatricopeptide repeat-containing protein At3g18970 isoform X2 OS=Cucurbita mo...	[more]
A0A6J1HCU6	8.07e-75	85.00	pentatricopeptide repeat-containing protein At3g18970 isoform X1 OS=Cucurbita mo...	[more]
A0A0A0LZ63	9.03e-52	67.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573660 PE=4 SV=1	[more]
A0A5D3CFP0	1.48e-51	67.86	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Cp4.1LG18g00900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18970.1	1.5e-16	38.93	mitochondrial editing factor 20	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47928:SF14	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 15..121
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 15..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g00900.1	Cp4.1LG18g00900.1	mRNA