Cp4.1LG18g00740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g00740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DNA excision repair protein ERCC-1
Location	Cp4.1LG18: 1886994 .. 1893433 (-)
RNA-Seq Expression	Cp4.1LG18g00740
Synteny	Cp4.1LG18g00740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATGTGCCATAGAAATCGGGTCGATTCGTCAATCCTCCCGTCGTCCATTGCCGAAGGACGCAAGAAACACACAAGAAATTCCTTTCAACGCTTCAATTCCCAGAATCTGAAACAGCACAAACAGTAAGATCATGGAGCAGCAAGGAGACGATGAAGAGAACTTACAGCAAACCGCTCACAAAAAGATGAAGACGATGATCAAGATACCCTCTTATCAAGAAGTAATCGATAGCTCTCAGCCGAAGTCTCAATCCTTCTCCCAAGCCTTTGCGTTCCTCAAATCCACTGAATTTTACTCTCCTCCTCCTCAACCAGTCCCTGCCTCCTCTCAATCATTGCCGGATTCTGATATCACAAACCCTAGGTTTCCACTTCGCCATTTTTGTTAATTGTTTAGGATTTTGTGTTTTTGGTTAGCTGGATTTCAATGTGTTGTATGTGGTTTTGTTGTTGATTTCAGAAAAAATGATCAGTTAGACACTCCATGTTCTTCAACATCAGCTTCTGCAGCTACTCCAGCTAATAGCTTGTCGGCGTCCAGCTCTGTTCCTCGGAATGCCATTCTTGTCAGCAATAGACAGGTGAGATTGTTACTTTGAATTGGCATTGGCACATTGTGTTTCTTCATTTGTGTATTTCGTTGGTAGATTGTGGATGGTTTTGATTATAGAGTTGTGATTATGGGTAAGGGATTTCACTGGCTGGCTGTCTTGTAGCTTAGCTTTGGATGTATATATGTGAGTTATAATTATTAGGAAGATTGACAAATATATTCATGACTTGCTAATATCAAACTCTTTTTAGCTAGTGGTGAGGAGTATTTTGGTAATCTTAATGGAATGTTATGATCTTTGAATACGTCTCTTAGCTTAGATGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTAATAAGGGTGTGGAAATCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGACGGGAAGTCTAAAAGGGAAAATCTGAAGAGGACAATATCTGCTAGAGGTGGGCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGATGTGAGATCCCACGCGGTTGGGGAGGATAACAAAGCATGCTTTATAAGGGTGTGGGAACTTCTCCCTTGTGGACGCATTTTAAAAACCTTGAGGGGAAACCCGAAAGGGAAAACCCAAAGAGGACAATATCTGGTTGGGCCGTTACAAATGGTAACAGAGCTAGACACTGGACAATGTGCCAACGAGGAGGCTGATTCCCGAAAGGGGTGGACATGAGGCAGTGAGCCAGCAAGGATACTGGGTCCCAAAGGGGATGGATTGGGGGTCCCACTTCGATTGGAGAAGGGAACGAGTGCTAGCGAGGATGCTAGACCCCAAGGGGGAGGGGGTGAATTGTGAGATTCCATAGCCGCTAGCAGATATTGTCTTCTTTAGGCTTTCCCTTTTGGGCTTCCCTTCAAAGTTTCTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTGTAAAGAATGCTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACAAGAAGTATATTTTTTTGGCGTATTACTTCAAGTTTACTTTATTTGAAGTTAATACCATTATTAAGCCGTTAATTATAGTGAATTGGTTCATCTCATGTTTCTCTCAGAGAGGAAATCCACTTCTCAAACACATTAGGAATGTGAGATGGACTTTTGCTGATGTTGTACCCGATTACTTACTCGGGAATAGCTCTTGTGCTCTCTATCTAAGGTTCGAGTTTCATTCCCTTTCTATTCACTATACTCATTGTATCAAAAGAAATAAAACAAAATAAAATTGAACTCTTGATTTAGAGTGCCCAGTGTGCATATAAGCTTTGTTTTGTCTGACTTATGTGCAGCACTGGCACTCATAAACTCGAGTTTATGAATCATTGAAGTCATTCCTACTATGAAATGTGGCTATATTTAGTATTTTTCTTTTAAAAAAATAAGAACCAAGTTTTCATTGAGAGAAATGAAATAATCTACAAGACAGAATCTACCCGACATACTTAAATGAGGTATGATGTAACCGCCTAAGTCCACCGCTAGTAGATATTGTCCTCTTTGGGGTTTTCCTTCTGAGCTTCCCTTCAAAGTTTTAAAACGCGTCTAATAGTGAGAGGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCCTCTCCAACCGACGTGGGATCTCACAATCCACCCCTTGGAGGCCCAGTGTCCTTGTTGGCACACCGCTCGGTGTTGTCTCTGATACCATTTGTAACCGCCCAAATCCACCGCTAGCAGATGCTGTTCTCTTTGGGCTTTCTCTTTTGGGCTTCCTTTCAAGGTTTTAAAACGCGTCTACTAGAGAGAGGTTTCTACACCCTTATAAGGAATGCTTTGTTCCCCTCTCCAATTGATGTGCGATCTCACAATCTCCCCACCTTGTGGACCAAGCTCCTTAATGGCACACCGCTTGGTGCTGGTTCTGATACCATTTGTAACAGTCAAAATCCACCGCTTGCCGATATTGTCCTCTTTGGACTTTCACTTCTGGGCTTCCCCTCAAGGTTTTAAAACACATTTACTAGGGAGAGGTTTTCACACTCTTATAAGAAATGCTTCGTTCCCCTTTCCAACCGAGGTGGGATCTCACATCTGACTAAGGAGGTCTAACACAAATTACATGAATAGATCTCAATCCAACAAAGTGTAAGTTGGTAATACAAAATGCCCGATCAGCAAACGTGACGTACACCCAACCAACTCCCGAAGCTCCTCCCAAGTTCCCTTAGCTCTCTAAATATCCTATTGTTCCTCTCTAACCAAATTTAACACGAAGTAGCAAAAACACAAGCTTGCCACAAACAAAACTCTTCCTTATCCCTAAAAGAAGGGTTCGGGAGCACCTCCTCGAACATAGACAACAACCTCTATTGCTAGCCAAAATAAACCCAAATGTCCTGAAGGAAAATCCCAAAGTATAAGGTCAAGGTCCTCTTCCTGCTGCTTGCAAACAACACACCACCAGAGCTGCTTTAGCCTTTGAATTTTTAACCTTAGTACTGGTTTTGAACTTGCAAAAAATTATGCATCAATCATCTAATCTTCTTTCTGTATGTTGGAGTATTTCATGGTTAGATTAATCCTATTTTGCAGTCTTCGGTATCATCTTCTGCATCCGGACTACCTATACTACCGTATAAGAGAACTACAAAAAAATTTCAAGCTTCGCGTCGTTCTGTGTCATGTCGATGTGGTAAGAAACCGTACCGCCTAGCCACCTTTTTTCTTACCCTGTTCTCCATTTTCCAGATTAAGTCTTCGTAGTCATTTTGATGCTCGTGTGAAGTAACGTCATCGATTAGTTTCTTTCAGGAAGATGTTGTCAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTACTTCACGATTGTACCCTTCTTTGTGCTTGGAGGTACATTTCATTATTAAGCATTTTAGTGCCGTCTATTGAAGATTTTGGTAAGTATTATATTGCAAAGTGAATTTAAAAGTTTGATTTCTGTTTTTTTATTAGTTTGGAGGAGTGTGGTCGTTACTTGGAGACTATAAAAGTTTACGAAAACAAGCCCGCAGATCTTATTCAAGGTCAGATGGATACCGACTACCTCTCTCGGGTATTGGTTTTCTTGAAGCTTTTTGCCTATTCAACATTAATTTATGTGGTTGTGATACCACTGTGAGATCCCACGTCGGTTGGGGAGGAGAACGGAACATTCTTTATAAGGGTGTGGAAACCTCCCTCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGCTTGAAAAGGAAAGCTCAAAGAGGACAATATTTGCTAGCGGTGGATTTTGGTTGTTACAACCACGATCAACTATAGCCTCTTTTTTATTTCCAAAAAGCTATATCCACAACAACTATATTCTGAATTAAAATTCTGGTTTTAATTGTAGCTTACTCATGTCCTAACATCAGTTCGGCATGTTAACAAGACTGATGTGGTTACCCTCGGGACGACATTTGGGGTACGCCTGCTGTATTTTCGCTAAGATTCTTCCGTTCTTGTCTGTTATGTCTTGTTTGGTGTCGAACTGCTAATTAGTTTTCCATTGCAGTCTCTGTCTCATGTCATGGATGCATCAATGGAAGATCTAGCTCGTTGCCCGGGCATAGGTGAACGCAAGGTAGACCTTTTTTTTCGAAGCACGACCCTTTTTCGAGTGTGTCCTTAGTTCTTGTTATCTGTACTCTTACTCGTTGGGTTCGCAAATTTATTTTGAAAATGTACCATGTCTTTGATGTCATTCATAACATTTGAGCTGGTTTTAGCTAGAAGGATAGCTTTGTTTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCGAGGGGAAGGGAAAGCCCAAAGAGGATATCTGCTAGCAGTGGGCTTGGGCCAGACACCGGGCGATGTGCCAGCGAGGAGGCTGAGTCTCGAAGGGGGTGGACACGAGGTGGTGTGCCAGTAAGGATGTTGGGCCTCCAAGGGGGTGGATTGGGGGGTCCCACATCGATTGGAGAAGGGAACGAGTGCCGGTGAGGACGCTGGGTCCCAAAGGGGGGTGGATTTTGAGATCCCATATCGGTTGGGGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAATAGATGCGTTTTAAAAACTTTGATGGGAGGCCCGAGAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATTTGGGAAGTTACCTTCTTTTTATCAACAAGACAATAACATGTTTTTAATATACAAGTAATCATAGAAACATTTACAACTATTAGATAATGGTATGCTGGGGAAGATGCAAATGAACACGAGCGTCACATAGTGACATACCGTATCGATAACATTTAGCCTTCAACTGTGATATACGTAGCTCGTTTGTTTGCACGAATGCTGTTATTAAATTCATCTTCCTCATCAGGTAAGGCGGCTGTACGACACTTTTCATGAGCCATTCAAGCGTGTCATTTCAACCCATCCTGCCGTTCTAGAAACTCCAACCCAGAATAATACCGAACCTCGCTCGATCGGTGAAGAACAAGATGTGGATGGGAAGAACACAGAAGATGCTAGCCAACACAAAAAAGAACCTGAATTGAACATCAAATCAGCTCTGTCTGCTGCTTTTGCCAAATATTCAGCTAAAATTGGTAAAAGTAGTAAGCCAGAAGGAGAGGAAAAAGAGCCTGAAAATAGCAACTCGCAGTAATGTTCACAAGCTGTAGAACTGACGGTTTGCTTGTTCATGCTACTGTAGAGAGTATGATCACTTGCTACATCCTTCTGAACACGACCCGAACGTGCTCGTGTTCTATTTATGAATGCAGCTTTGCTGTTGGATGGAATGCAAGACTGGAAGTGATAAATTTTCGGGTATTCGTTCTGCAGTAGTCGGAAATCGACGTGTAAATTATATTTGCTTCTCTTCATTGTTTGTAGCTGTAACTTTTGCTGGACTAATGACAACTAAGATCTATAATAAGCATGGTCTTTTTAGGCATAGTAAAGTCTCCATCTAGGTGATATTCATCCTCGAATTATTGTTTACTTCTTT

mRNA sequence

CGATGTGCCATAGAAATCGGGTCGATTCGTCAATCCTCCCGTCGTCCATTGCCGAAGGACGCAAGAAACACACAAGAAATTCCTTTCAACGCTTCAATTCCCAGAATCTGAAACAGCACAAACAGTAAGATCATGGAGCAGCAAGGAGACGATGAAGAGAACTTACAGCAAACCGCTCACAAAAAGATGAAGACGATGATCAAGATACCCTCTTATCAAGAAGTAATCGATAGCTCTCAGCCGAAGTCTCAATCCTTCTCCCAAGCCTTTGCGTTCCTCAAATCCACTGAATTTTACTCTCCTCCTCCTCAACCAGTCCCTGCCTCCTCTCAATCATTGCCGGATTCTGATATCACAAACCCTAGAAAAAATGATCAGTTAGACACTCCATGTTCTTCAACATCAGCTTCTGCAGCTACTCCAGCTAATAGCTTGTCGGCGTCCAGCTCTGTTCCTCGGAATGCCATTCTTGTCAGCAATAGACAGAGAGGAAATCCACTTCTCAAACACATTAGGAATGTGAGATGGACTTTTGCTGATGTTGTACCCGATTACTTACTCGGGAATAGCTCTTGTGCTCTCTATCTAAGTCTTCGGTATCATCTTCTGCATCCGGACTACCTATACTACCGTATAAGAGAACTACAAAAAAATTTCAAGCTTCGCGTCGTTCTGTGTCATGTCGATGTGGAAGATGTTGTCAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTACTTCACGATTGTACCCTTCTTTGTGCTTGGAGTTTGGAGGAGTGTGGTCGTTACTTGGAGACTATAAAAGTTTACGAAAACAAGCCCGCAGATCTTATTCAAGGTCAGATGGATACCGACTACCTCTCTCGGCTTACTCATGTCCTAACATCAGTTCGGCATGTTAACAAGACTGATGTGGTTACCCTCGGGACGACATTTGGGTCTCTGTCTCATGTCATGGATGCATCAATGGAAGATCTAGCTCGTTGCCCGGGCATAGGTGAACGCAAGGTAAGGCGGCTGTACGACACTTTTCATGAGCCATTCAAGCGTGTCATTTCAACCCATCCTGCCGTTCTAGAAACTCCAACCCAGAATAATACCGAACCTCGCTCGATCGGTGAAGAACAAGATGTGGATGGGAAGAACACAGAAGATGCTAGCCAACACAAAAAAGAACCTGAATTGAACATCAAATCAGCTCTGTCTGCTGCTTTTGCCAAATATTCAGCTAAAATTGGTAAAAGTAGTAAGCCAGAAGGAGAGGAAAAAGAGCCTGAAAATAGCAACTCGCAGTAATGTTCACAAGCTGTAGAACTGACGGTTTGCTTGTTCATGCTACTGTAGAGAGTATGATCACTTGCTACATCCTTCTGAACACGACCCGAACGTGCTCGTGTTCTATTTATGAATGCAGCTTTGCTGTTGGATGGAATGCAAGACTGGAAGTGATAAATTTTCGGGTATTCGTTCTGCAGTAGTCGGAAATCGACGTGTAAATTATATTTGCTTCTCTTCATTGTTTGTAGCTGTAACTTTTGCTGGACTAATGACAACTAAGATCTATAATAAGCATGGTCTTTTTAGGCATAGTAAAGTCTCCATCTAGGTGATATTCATCCTCGAATTATTGTTTACTTCTTT

Coding sequence (CDS)

ATGGAGCAGCAAGGAGACGATGAAGAGAACTTACAGCAAACCGCTCACAAAAAGATGAAGACGATGATCAAGATACCCTCTTATCAAGAAGTAATCGATAGCTCTCAGCCGAAGTCTCAATCCTTCTCCCAAGCCTTTGCGTTCCTCAAATCCACTGAATTTTACTCTCCTCCTCCTCAACCAGTCCCTGCCTCCTCTCAATCATTGCCGGATTCTGATATCACAAACCCTAGAAAAAATGATCAGTTAGACACTCCATGTTCTTCAACATCAGCTTCTGCAGCTACTCCAGCTAATAGCTTGTCGGCGTCCAGCTCTGTTCCTCGGAATGCCATTCTTGTCAGCAATAGACAGAGAGGAAATCCACTTCTCAAACACATTAGGAATGTGAGATGGACTTTTGCTGATGTTGTACCCGATTACTTACTCGGGAATAGCTCTTGTGCTCTCTATCTAAGTCTTCGGTATCATCTTCTGCATCCGGACTACCTATACTACCGTATAAGAGAACTACAAAAAAATTTCAAGCTTCGCGTCGTTCTGTGTCATGTCGATGTGGAAGATGTTGTCAAGCCTTTGCTTGAAGTCACCAAAACAGCTCTACTTCACGATTGTACCCTTCTTTGTGCTTGGAGTTTGGAGGAGTGTGGTCGTTACTTGGAGACTATAAAAGTTTACGAAAACAAGCCCGCAGATCTTATTCAAGGTCAGATGGATACCGACTACCTCTCTCGGCTTACTCATGTCCTAACATCAGTTCGGCATGTTAACAAGACTGATGTGGTTACCCTCGGGACGACATTTGGGTCTCTGTCTCATGTCATGGATGCATCAATGGAAGATCTAGCTCGTTGCCCGGGCATAGGTGAACGCAAGGTAAGGCGGCTGTACGACACTTTTCATGAGCCATTCAAGCGTGTCATTTCAACCCATCCTGCCGTTCTAGAAACTCCAACCCAGAATAATACCGAACCTCGCTCGATCGGTGAAGAACAAGATGTGGATGGGAAGAACACAGAAGATGCTAGCCAACACAAAAAAGAACCTGAATTGAACATCAAATCAGCTCTGTCTGCTGCTTTTGCCAAATATTCAGCTAAAATTGGTAAAAGTAGTAAGCCAGAAGGAGAGGAAAAAGAGCCTGAAAATAGCAACTCGCAGTAA

Protein sequence

MEQQGDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQPVPASSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRGNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSAAFAKYSAKIGKSSKPEGEEKEPENSNSQ

Homology

[Close]

BLAST of Cp4.1LG18g00740 vs. ExPASy Swiss-Prot
Match: Q9MA98 (DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana OX=3702 GN=ERCC1 PE=2 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 1.5e-126
Identity = 243/402 (60.45%), Postives = 301/402 (74.88%), Query Frame = 0


Query: 2   EQQGDDEENLQQTAHKKMKT--MIKIPSYQEVIDSSQPK---------SQSFSQAFAFLK 61
           +  G+   +L Q   +K KT  +I +PSYQEV++SSQ K         SQSFSQAFAF+K
Sbjct: 5   DDDGEKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVK 64

Query: 62  STEFYSPPPQPVPASSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRN 121
           S++ YSPPP    A+S S P      P  + Q      ++S+S      S+ ++++  RN
Sbjct: 65  SSDVYSPPPPSSAAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRN 124

Query: 122 AILVSNRQRGNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRE 181
           AILVS+RQ+GNPLLKHIRNV+W F+D++PDY+LG +SCALYLSLRYHLLHPDYLY+RIRE
Sbjct: 125 AILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRE 184

Query: 182 LQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKP 241
           LQKNFKL VVLCHVDVED VKPLLEVTKTALLHDCTLLCAWS+ EC RYLETIKVYENKP
Sbjct: 185 LQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKP 244

Query: 242 ADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGE 301
           ADLIQGQMDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+H++DASMEDLARCPGIGE
Sbjct: 245 ADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGE 304

Query: 302 RKVRRLYDTFHEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDV--DGKNTEDASQHKK- 361
           RKV+RLYDTFHEPFKR  S++P+V+E P       + +  E+ V  D    ED+ + KK 
Sbjct: 305 RKVKRLYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDEDFVEDSRKRKKK 364

Query: 362 --EPELNIKSALSAAFAKYSAKIGKSSKPEGEEKEPENSNSQ 388
             EPE  +K+ALSA FA+YS ++ K  + + E+     S+++
Sbjct: 365 EPEPEKTVKTALSAVFARYSDRLSKKKEKQKEKDTTTASDAE 406

[Close]

BLAST of Cp4.1LG18g00740 vs. ExPASy Swiss-Prot
Match: P07992 (DNA excision repair protein ERCC-1 OS=Homo sapiens OX=9606 GN=ERCC1 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.9e-64
Identity = 137/303 (45.21%), Postives = 187/303 (61.72%), Query Frame = 0


Query: 5   GDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQPVPA 64
           G D+E + Q +    +    IP  ++ +     K           +ST+          A
Sbjct: 4   GKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAK--------PLFRSTQSLPTVDTSAQA 63

Query: 65  SSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRGNPLL 124
           + Q+  +  I+ P +      P  S   +  TP  +L   +    N+I+VS RQRGNP+L
Sbjct: 64  APQTYAEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAK--SNSIIVSPRQRGNPVL 123

Query: 125 KHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHV 184
           K +RNV W F DV+PDY+LG S+CAL+LSLRYH LHPDY++ R++ L KNF LRV+L  V
Sbjct: 124 KFVRNVPWEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQV 183

Query: 185 DVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTDYLS 244
           DV+D  + L E+ K  +L DCTL+ AWS EE GRYLET K YE KPADL+  +++ D++S
Sbjct: 184 DVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVS 243

Query: 245 RLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTFHEPF 304
           R+T  LT+V+ VNKTD  TL TTFGSL  ++ AS EDLA CPG+G +K RRL+D  HEPF
Sbjct: 244 RVTECLTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPF 296

Query: 305 KRV 308
            +V
Sbjct: 304 LKV 296

[Close]

BLAST of Cp4.1LG18g00740 vs. ExPASy Swiss-Prot
Match: Q1LZ75 (DNA excision repair protein ERCC-1 OS=Bos taurus OX=9913 GN=ERCC1 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 8.3e-64
Identity = 136/301 (45.18%), Postives = 193/301 (64.12%), Query Frame = 0


Query: 7   DEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQPVPASS 66
           DEE + + A    +    IP+ ++V+    P ++   ++   L + E  SPPP P     
Sbjct: 2   DEEGVHKPAGPPTRKKFLIPTDEDVV--PPPGAKPLFRSTRSLPTVE-TSPPPGP----- 61

Query: 67  QSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRGNPLLKH 126
           Q+  +  ++ P    +   P      +  TP  + +       N+I+VS RQRGNP+L+ 
Sbjct: 62  QTYAEYALSGPPGGAEATRPVGPEPLAEETP--NQAPKPGAKSNSIIVSPRQRGNPVLRF 121

Query: 127 IRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDV 186
           +RNV W F DV+PDY+LG S+CAL+LSLRYH LHPDY++ R++ L K++ LRV+L  VDV
Sbjct: 122 VRNVPWEFGDVLPDYVLGQSTCALFLSLRYHNLHPDYIHQRLQSLGKSYALRVLLVQVDV 181

Query: 187 EDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRL 246
           +D  + L E+ K  +L DCTL+ AWS EE GRYLET K YE KPADL+  +++ D++SR+
Sbjct: 182 KDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRV 241

Query: 247 THVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTFHEPFKR 306
           T  LT+V+ VNKTD  TL TTFGSL  ++ AS EDL+ CPG+G +K RRL+D FHEPF +
Sbjct: 242 TECLTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLSLCPGLGPQKARRLFDVFHEPFLK 292

Query: 307 V 308
           V
Sbjct: 302 V 292

[Close]

BLAST of Cp4.1LG18g00740 vs. ExPASy Swiss-Prot
Match: P07903 (DNA excision repair protein ERCC-1 OS=Mus musculus OX=10090 GN=Ercc1 PE=2 SV=2)

HSP 1 Score: 244.2 bits (622), Expect = 2.4e-63
Identity = 136/303 (44.88%), Postives = 185/303 (61.06%), Query Frame = 0


Query: 5   GDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQPVPA 64
           G DEE+  Q +    +    IP  +E +  +  K           +S+   + P      
Sbjct: 4   GKDEESRPQPSGPPTRRKFVIPLEEEEVPCAGVK--------PLFRSSRNPTIPATSAHV 63

Query: 65  SSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRGNPLL 124
           + Q+  +  IT P        P  S  A+   P+ +L   +    N+I+VS RQRGNP+L
Sbjct: 64  APQTYAEYAITQPPGGAGATVPTGSEPAAGENPSQTLKTGAK--SNSIIVSPRQRGNPVL 123

Query: 125 KHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHV 184
           K +RNV W F +V+PDY+LG S+CAL+LSLRYH LHPDY++ R++ L KNF LRV+L  V
Sbjct: 124 KFVRNVPWEFGEVIPDYVLGQSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRVLLVQV 183

Query: 185 DVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTDYLS 244
           DV+D  + L E+ K  +L DCTL+ AWS EE GRYLET K YE KPADL+  +++ ++LS
Sbjct: 184 DVKDPQQALKELAKMCILADCTLVLAWSAEEAGRYLETYKAYEQKPADLLMEKLEQNFLS 243

Query: 245 RLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTFHEPF 304
           R T  LT+V+ VNKTD  TL  TFGSL  +  AS EDLA CPG+G +K RRL++  HEPF
Sbjct: 244 RATECLTTVKSVNKTDSQTLLATFGSLEQLFTASREDLALCPGLGPQKARRLFEVLHEPF 296

Query: 305 KRV 308
            +V
Sbjct: 304 LKV 296

[Close]

BLAST of Cp4.1LG18g00740 vs. ExPASy Swiss-Prot
Match: Q06182 (Mating-type switching protein swi10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=swi10 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.4e-48
Identity = 93/200 (46.50%), Postives = 136/200 (68.00%), Query Frame = 0


Query: 105 SSVPRNAILVSNRQRGNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYL 164
           S V  ++ILV+ RQ+GNPLL H+RNV W + D+VPD+++G   C+L+LSL+YH LHP+Y+
Sbjct: 36  SRVTAHSILVNPRQKGNPLLPHVRNVPWEYTDIVPDFVMGTGICSLFLSLKYHHLHPEYI 95

Query: 165 YYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIK 224
           Y RI +L K++ LR++L  VDVE+    + E+ KT++++  TL+ AWS EE  RYLET K
Sbjct: 96  YSRISKLGKSYNLRILLILVDVENHQASIQELVKTSIVNQYTLILAWSSEEAARYLETYK 155

Query: 225 VYENKPADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLAR 284
            YEN    LI  +  TDYLS++   LTS+R +NK+D ++L + FGSL   + AS ++L +
Sbjct: 156 AYENMSPALIMEKPSTDYLSQVQSFLTSIRGINKSDSLSLLSKFGSLERALVASRDELEQ 215

Query: 285 CPGIGERKVRRLYDTFHEPF 305
             G G  KV R  +   +PF
Sbjct: 216 LEGWGPTKVNRFLEAVQQPF 235

[Close]

BLAST of Cp4.1LG18g00740 vs. NCBI nr
Match: XP_023516191.1 (DNA excision repair protein ERCC-1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 748 bits (1930), Expect = 7.89e-272
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0


Query: 1   MEQQGDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 60
           MEQQGDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ
Sbjct: 1   MEQQGDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 60

Query: 61  PVPASSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRG 120
           PVPASSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRG
Sbjct: 61  PVPASSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRG 120

Query: 121 NPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 180
           NPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV
Sbjct: 121 NPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 180

Query: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 240
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT
Sbjct: 181 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 240

Query: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF 300
           DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF
Sbjct: 241 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF 300

Query: 301 HEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSAA 360
           HEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSAA
Sbjct: 301 HEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSAA 360

Query: 361 FAKYSAKIGKSSKPEGEEKEPENSNSQ 387
           FAKYSAKIGKSSKPEGEEKEPENSNSQ
Sbjct: 361 FAKYSAKIGKSSKPEGEEKEPENSNSQ 387

[Close]

BLAST of Cp4.1LG18g00740 vs. NCBI nr
Match: KAG7023940.1 (DNA excision repair protein ERCC-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 734 bits (1895), Expect = 9.22e-266
Identity = 381/388 (98.20%), Postives = 385/388 (99.23%), Query Frame = 0


Query: 1   MEQQGDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 60
           MEQQGD+EENLQQTAHKKMKT+IKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ
Sbjct: 45  MEQQGDEEENLQQTAHKKMKTIIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 104

Query: 61  PVPAS-SQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQR 120
           PVPAS SQSLPDSDITNPRKNDQLDTPCSSTSASAATPAN LSASSSV RNAILVSNRQR
Sbjct: 105 PVPASPSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANRLSASSSVTRNAILVSNRQR 164

Query: 121 GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 165 GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 224

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD
Sbjct: 225 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 284

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT 300
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT
Sbjct: 285 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT 344

Query: 301 FHEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSA 360
           FHEPFKRV+STHPAVLETPTQNNTEPRS+GEEQDVDGKNTEDASQHKKEPELNIKSALSA
Sbjct: 345 FHEPFKRVVSTHPAVLETPTQNNTEPRSVGEEQDVDGKNTEDASQHKKEPELNIKSALSA 404

Query: 361 AFAKYSAKIGKSSKPEGEEKEPENSNSQ 387
           AFAKYSAKIGKSSKPEGEEKEPENSNSQ
Sbjct: 405 AFAKYSAKIGKSSKPEGEEKEPENSNSQ 432

[Close]

BLAST of Cp4.1LG18g00740 vs. NCBI nr
Match: KAG6590378.1 (DNA excision repair protein ERCC-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 733 bits (1892), Expect = 2.64e-265
Identity = 380/388 (97.94%), Postives = 385/388 (99.23%), Query Frame = 0


Query: 1   MEQQGDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 60
           MEQQGD+EENLQQTAHKKMKT+IKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ
Sbjct: 45  MEQQGDEEENLQQTAHKKMKTIIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 104

Query: 61  PVPAS-SQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQR 120
           PVPAS SQSLPDSDITNPRKNDQLDTPCSSTSASAATPAN LSASSSV RNAILVSNRQR
Sbjct: 105 PVPASPSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANRLSASSSVTRNAILVSNRQR 164

Query: 121 GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 165 GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 224

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD
Sbjct: 225 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 284

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT 300
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT
Sbjct: 285 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT 344

Query: 301 FHEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSA 360
           +HEPFKRV+STHPAVLETPTQNNTEPRS+GEEQDVDGKNTEDASQHKKEPELNIKSALSA
Sbjct: 345 YHEPFKRVVSTHPAVLETPTQNNTEPRSVGEEQDVDGKNTEDASQHKKEPELNIKSALSA 404

Query: 361 AFAKYSAKIGKSSKPEGEEKEPENSNSQ 387
           AFAKYSAKIGKSSKPEGEEKEPENSNSQ
Sbjct: 405 AFAKYSAKIGKSSKPEGEEKEPENSNSQ 432

[Close]

BLAST of Cp4.1LG18g00740 vs. NCBI nr
Match: XP_022961554.1 (DNA excision repair protein ERCC-1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 726 bits (1875), Expect = 1.03e-262
Identity = 378/388 (97.42%), Postives = 384/388 (98.97%), Query Frame = 0


Query: 1   MEQQGDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 60
           MEQQGD+EENLQQTAHKKMKT+IKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ
Sbjct: 45  MEQQGDEEENLQQTAHKKMKTIIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 104

Query: 61  PVPASS-QSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQR 120
           PVPASS QSLPDSDITNPRKNDQLDTPCSSTSASAATPAN LSASSSV RNAILVSNRQR
Sbjct: 105 PVPASSSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANRLSASSSVTRNAILVSNRQR 164

Query: 121 GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 165 GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 224

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD
Sbjct: 225 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 284

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT 300
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT
Sbjct: 285 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT 344

Query: 301 FHEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSA 360
           FHEPFKRV+STHP+VLETPTQN+TEPRSI EEQDVDGKNTEDASQHKKEPEL+IKSALSA
Sbjct: 345 FHEPFKRVVSTHPSVLETPTQNSTEPRSIREEQDVDGKNTEDASQHKKEPELSIKSALSA 404

Query: 361 AFAKYSAKIGKSSKPEGEEKEPENSNSQ 387
           AFAKYSAKIGKSSKPEGEEKEPENSNSQ
Sbjct: 405 AFAKYSAKIGKSSKPEGEEKEPENSNSQ 432

[Close]

BLAST of Cp4.1LG18g00740 vs. NCBI nr
Match: XP_022968743.1 (DNA excision repair protein ERCC-1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 711 bits (1834), Expect = 3.50e-257
Identity = 373/387 (96.38%), Postives = 379/387 (97.93%), Query Frame = 0


Query: 3   QQGDDEENLQQTA-HKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQP 62
           +QGD+EENLQQTA HKKMKT+IKI SYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQP
Sbjct: 2   EQGDEEENLQQTAAHKKMKTIIKISSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQP 61

Query: 63  VPASS-QSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRG 122
           VPASS QSLPDSDITNPRKNDQLDT CSSTSASAATPANSLSASSSV RNAILVSNRQRG
Sbjct: 62  VPASSSQSLPDSDITNPRKNDQLDTSCSSTSASAATPANSLSASSSVTRNAILVSNRQRG 121

Query: 123 NPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 182
           NPLLKHIRNVRWTFADVVPDYLLG SSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV
Sbjct: 122 NPLLKHIRNVRWTFADVVPDYLLGRSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 181

Query: 183 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 242
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT
Sbjct: 182 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 241

Query: 243 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF 302
           DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF
Sbjct: 242 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF 301

Query: 303 HEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSAA 362
           HEPFKRV+STHPAVLETPTQNNTEPR +GEEQDVDGK+TEDASQHKKEPELNIKSALSAA
Sbjct: 302 HEPFKRVVSTHPAVLETPTQNNTEPRLVGEEQDVDGKSTEDASQHKKEPELNIKSALSAA 361

Query: 363 FAKYSAKIGKSSKPEGEEKEPENSNSQ 387
           FAKYSAKIGKSSKPEGEEKE ENSNSQ
Sbjct: 362 FAKYSAKIGKSSKPEGEEKEHENSNSQ 388

[Close]

BLAST of Cp4.1LG18g00740 vs. ExPASy TrEMBL
Match: A0A6J1HED7 (DNA excision repair protein ERCC-1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462101 PE=3 SV=1)

HSP 1 Score: 726 bits (1875), Expect = 4.97e-263
Identity = 378/388 (97.42%), Postives = 384/388 (98.97%), Query Frame = 0


Query: 1   MEQQGDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 60
           MEQQGD+EENLQQTAHKKMKT+IKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ
Sbjct: 45  MEQQGDEEENLQQTAHKKMKTIIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 104

Query: 61  PVPASS-QSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQR 120
           PVPASS QSLPDSDITNPRKNDQLDTPCSSTSASAATPAN LSASSSV RNAILVSNRQR
Sbjct: 105 PVPASSSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANRLSASSSVTRNAILVSNRQR 164

Query: 121 GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 165 GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 224

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD
Sbjct: 225 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 284

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT 300
           TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT
Sbjct: 285 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT 344

Query: 301 FHEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSA 360
           FHEPFKRV+STHP+VLETPTQN+TEPRSI EEQDVDGKNTEDASQHKKEPEL+IKSALSA
Sbjct: 345 FHEPFKRVVSTHPSVLETPTQNSTEPRSIREEQDVDGKNTEDASQHKKEPELSIKSALSA 404

Query: 361 AFAKYSAKIGKSSKPEGEEKEPENSNSQ 387
           AFAKYSAKIGKSSKPEGEEKEPENSNSQ
Sbjct: 405 AFAKYSAKIGKSSKPEGEEKEPENSNSQ 432

[Close]

BLAST of Cp4.1LG18g00740 vs. ExPASy TrEMBL
Match: A0A6J1HYZ8 (DNA excision repair protein ERCC-1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467887 PE=3 SV=1)

HSP 1 Score: 711 bits (1834), Expect = 1.69e-257
Identity = 373/387 (96.38%), Postives = 379/387 (97.93%), Query Frame = 0


Query: 3   QQGDDEENLQQTA-HKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQP 62
           +QGD+EENLQQTA HKKMKT+IKI SYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQP
Sbjct: 2   EQGDEEENLQQTAAHKKMKTIIKISSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQP 61

Query: 63  VPASS-QSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRG 122
           VPASS QSLPDSDITNPRKNDQLDT CSSTSASAATPANSLSASSSV RNAILVSNRQRG
Sbjct: 62  VPASSSQSLPDSDITNPRKNDQLDTSCSSTSASAATPANSLSASSSVTRNAILVSNRQRG 121

Query: 123 NPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 182
           NPLLKHIRNVRWTFADVVPDYLLG SSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV
Sbjct: 122 NPLLKHIRNVRWTFADVVPDYLLGRSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 181

Query: 183 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 242
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT
Sbjct: 182 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 241

Query: 243 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF 302
           DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF
Sbjct: 242 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF 301

Query: 303 HEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSAA 362
           HEPFKRV+STHPAVLETPTQNNTEPR +GEEQDVDGK+TEDASQHKKEPELNIKSALSAA
Sbjct: 302 HEPFKRVVSTHPAVLETPTQNNTEPRLVGEEQDVDGKSTEDASQHKKEPELNIKSALSAA 361

Query: 363 FAKYSAKIGKSSKPEGEEKEPENSNSQ 387
           FAKYSAKIGKSSKPEGEEKE ENSNSQ
Sbjct: 362 FAKYSAKIGKSSKPEGEEKEHENSNSQ 388

[Close]

BLAST of Cp4.1LG18g00740 vs. ExPASy TrEMBL
Match: A0A6J1HCJ5 (DNA excision repair protein ERCC-1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462101 PE=3 SV=1)

HSP 1 Score: 682 bits (1761), Expect = 6.14e-246
Identity = 361/388 (93.04%), Postives = 367/388 (94.59%), Query Frame = 0


Query: 1   MEQQGDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 60
           MEQQGD+EENLQQTAHKKMKT+IKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ
Sbjct: 45  MEQQGDEEENLQQTAHKKMKTIIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ 104

Query: 61  PVPASS-QSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQR 120
           PVPASS QSLPDSDITNPRKNDQLDTPCSSTSASAATPAN LSASSSV RNAILVSNRQR
Sbjct: 105 PVPASSSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANRLSASSSVTRNAILVSNRQR 164

Query: 121 GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 180
           GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
Sbjct: 165 GNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV 224

Query: 181 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD 240
           VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQ    
Sbjct: 225 VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQ---- 284

Query: 241 TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT 300
                        VRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT
Sbjct: 285 -------------VRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT 344

Query: 301 FHEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSA 360
           FHEPFKRV+STHP+VLETPTQN+TEPRSI EEQDVDGKNTEDASQHKKEPEL+IKSALSA
Sbjct: 345 FHEPFKRVVSTHPSVLETPTQNSTEPRSIREEQDVDGKNTEDASQHKKEPELSIKSALSA 404

Query: 361 AFAKYSAKIGKSSKPEGEEKEPENSNSQ 387
           AFAKYSAKIGKSSKPEGEEKEPENSNSQ
Sbjct: 405 AFAKYSAKIGKSSKPEGEEKEPENSNSQ 415

[Close]

BLAST of Cp4.1LG18g00740 vs. ExPASy TrEMBL
Match: A0A6J1I0J7 (DNA excision repair protein ERCC-1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467887 PE=3 SV=1)

HSP 1 Score: 667 bits (1720), Expect = 2.10e-240
Identity = 356/387 (91.99%), Postives = 362/387 (93.54%), Query Frame = 0


Query: 3   QQGDDEENLQQTA-HKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQP 62
           +QGD+EENLQQTA HKKMKT+IKI SYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQP
Sbjct: 2   EQGDEEENLQQTAAHKKMKTIIKISSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQP 61

Query: 63  VPASS-QSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRG 122
           VPASS QSLPDSDITNPRKNDQLDT CSSTSASAATPANSLSASSSV RNAILVSNRQRG
Sbjct: 62  VPASSSQSLPDSDITNPRKNDQLDTSCSSTSASAATPANSLSASSSVTRNAILVSNRQRG 121

Query: 123 NPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 182
           NPLLKHIRNVRWTFADVVPDYLLG SSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV
Sbjct: 122 NPLLKHIRNVRWTFADVVPDYLLGRSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 181

Query: 183 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDT 242
           LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQ     
Sbjct: 182 LCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQ----- 241

Query: 243 DYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF 302
                       VRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF
Sbjct: 242 ------------VRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTF 301

Query: 303 HEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTEDASQHKKEPELNIKSALSAA 362
           HEPFKRV+STHPAVLETPTQNNTEPR +GEEQDVDGK+TEDASQHKKEPELNIKSALSAA
Sbjct: 302 HEPFKRVVSTHPAVLETPTQNNTEPRLVGEEQDVDGKSTEDASQHKKEPELNIKSALSAA 361

Query: 363 FAKYSAKIGKSSKPEGEEKEPENSNSQ 387
           FAKYSAKIGKSSKPEGEEKE ENSNSQ
Sbjct: 362 FAKYSAKIGKSSKPEGEEKEHENSNSQ 371

[Close]

BLAST of Cp4.1LG18g00740 vs. ExPASy TrEMBL
Match: A0A1S3CIE0 (DNA excision repair protein ERCC-1 OS=Cucumis melo OX=3656 GN=LOC103501314 PE=3 SV=1)

HSP 1 Score: 640 bits (1651), Expect = 1.38e-229
Identity = 338/389 (86.89%), Postives = 357/389 (91.77%), Query Frame = 0


Query: 3   QQGDDEENLQQTAHKKMKTMIKIPSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQPV 62
           ++G  EEN QQT HKK KT+IKIPSYQEV DSSQPKSQSFSQAFAFLKS+EFYSPPP+P 
Sbjct: 2   EEGSAEENFQQTPHKKSKTIIKIPSYQEVFDSSQPKSQSFSQAFAFLKSSEFYSPPPKPP 61

Query: 63  -PASSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRNAILVSNRQRGN 122
            P+SSQSLP S+ITNPRKNDQLDT  SSTSAS ATP NSLS SSSV RNAILVSNRQ+GN
Sbjct: 62  SPSSSQSLPASNITNPRKNDQLDTSSSSTSASTATPVNSLSVSSSVSRNAILVSNRQKGN 121

Query: 123 PLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVL 182
           PLLKHIRNVRW FADVVPDYLLG SSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVL
Sbjct: 122 PLLKHIRNVRWAFADVVPDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVL 181

Query: 183 CHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTD 242
           CHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTD
Sbjct: 182 CHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTD 241

Query: 243 YLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDTFH 302
           YLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSH+MDASMEDLARCPGIGERKVRRLYDTFH
Sbjct: 242 YLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFH 301

Query: 303 EPFKRVISTHPAVLETPTQNNTEPRSIGEEQDVDGKNTE-DASQHKKEPELNIKSALSAA 362
           EPFKR++STHPAV ETPTQN+T+PRSI EEQDVDGK  E D SQHKKEP+LN+KSALSAA
Sbjct: 302 EPFKRIVSTHPAVPETPTQNSTKPRSINEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAA 361

Query: 363 FAKYSAKIGKSSKPEGEEK--EPENSNSQ 387
           FAKY+ KI KSS    E++  EPE+SN Q
Sbjct: 362 FAKYADKIAKSSSMPQEKEIGEPESSNVQ 390

[Close]

BLAST of Cp4.1LG18g00740 vs. TAIR 10
Match: AT3G05210.1 (nucleotide repair protein, putative )

HSP 1 Score: 454.1 bits (1167), Expect = 1.1e-127
Identity = 243/402 (60.45%), Postives = 301/402 (74.88%), Query Frame = 0


Query: 2   EQQGDDEENLQQTAHKKMKT--MIKIPSYQEVIDSSQPK---------SQSFSQAFAFLK 61
           +  G+   +L Q   +K KT  +I +PSYQEV++SSQ K         SQSFSQAFAF+K
Sbjct: 5   DDDGEKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVK 64

Query: 62  STEFYSPPPQPVPASSQSLPDSDITNPRKNDQLDTPCSSTSASAATPANSLSASSSVPRN 121
           S++ YSPPP    A+S S P      P  + Q      ++S+S      S+ ++++  RN
Sbjct: 65  SSDVYSPPPPSSAAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRN 124

Query: 122 AILVSNRQRGNPLLKHIRNVRWTFADVVPDYLLGNSSCALYLSLRYHLLHPDYLYYRIRE 181
           AILVS+RQ+GNPLLKHIRNV+W F+D++PDY+LG +SCALYLSLRYHLLHPDYLY+RIRE
Sbjct: 125 AILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRE 184

Query: 182 LQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKP 241
           LQKNFKL VVLCHVDVED VKPLLEVTKTALLHDCTLLCAWS+ EC RYLETIKVYENKP
Sbjct: 185 LQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKP 244

Query: 242 ADLIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGE 301
           ADLIQGQMDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+H++DASMEDLARCPGIGE
Sbjct: 245 ADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGE 304

Query: 302 RKVRRLYDTFHEPFKRVISTHPAVLETPTQNNTEPRSIGEEQDV--DGKNTEDASQHKK- 361
           RKV+RLYDTFHEPFKR  S++P+V+E P       + +  E+ V  D    ED+ + KK 
Sbjct: 305 RKVKRLYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDEDFVEDSRKRKKK 364

Query: 362 --EPELNIKSALSAAFAKYSAKIGKSSKPEGEEKEPENSNSQ 388
             EPE  +K+ALSA FA+YS ++ K  + + E+     S+++
Sbjct: 365 EPEPEKTVKTALSAVFARYSDRLSKKKEKQKEKDTTTASDAE 406

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g00740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA98	1.5e-126	60.45	DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana OX=3702 GN=ERCC1 PE=2...	[more]
P07992	2.9e-64	45.21	DNA excision repair protein ERCC-1 OS=Homo sapiens OX=9606 GN=ERCC1 PE=1 SV=1	[more]
Q1LZ75	8.3e-64	45.18	DNA excision repair protein ERCC-1 OS=Bos taurus OX=9913 GN=ERCC1 PE=2 SV=1	[more]
P07903	2.4e-63	44.88	DNA excision repair protein ERCC-1 OS=Mus musculus OX=10090 GN=Ercc1 PE=2 SV=2	[more]
Q06182	6.4e-48	46.50	Mating-type switching protein swi10 OS=Schizosaccharomyces pombe (strain 972 / A...	[more]

BLAST of Cp4.1LG18g00740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516191.1	7.89e-272	100.00	DNA excision repair protein ERCC-1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7023940.1	9.22e-266	98.20	DNA excision repair protein ERCC-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6590378.1	2.64e-265	97.94	DNA excision repair protein ERCC-1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022961554.1	1.03e-262	97.42	DNA excision repair protein ERCC-1 isoform X1 [Cucurbita moschata]	[more]
XP_022968743.1	3.50e-257	96.38	DNA excision repair protein ERCC-1 isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG18g00740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HED7	4.97e-263	97.42	DNA excision repair protein ERCC-1 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HYZ8	1.69e-257	96.38	DNA excision repair protein ERCC-1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HCJ5	6.14e-246	93.04	DNA excision repair protein ERCC-1 isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I0J7	2.10e-240	91.99	DNA excision repair protein ERCC-1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A1S3CIE0	1.38e-229	86.89	DNA excision repair protein ERCC-1 OS=Cucumis melo OX=3656 GN=LOC103501314 PE=3 ...	[more]

BLAST of Cp4.1LG18g00740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05210.1	1.1e-127	60.45	nucleotide repair protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.150.20		coord: 225..312 e-value: 4.9E-33 score: 114.6
None	No IPR available	GENE3D	3.40.50.10130		coord: 110..224 e-value: 2.1E-49 score: 168.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..387
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..387
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..354
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..352
IPR004579	ERCC1/RAD10/SWI10 family	PFAM	PF03834	Rad10	coord: 112..224 e-value: 7.8E-44 score: 148.3
IPR004579	ERCC1/RAD10/SWI10 family	TIGRFAM	TIGR00597	TIGR00597	coord: 110..221 e-value: 1.4E-43 score: 145.3
IPR004579	ERCC1/RAD10/SWI10 family	PANTHER	PTHR12749	EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1	coord: 19..309
IPR010994	RuvA domain 2-like	SUPERFAMILY	47781	RuvA domain 2-like	coord: 198..305
IPR011335	Restriction endonuclease type II-like	SUPERFAMILY	52980	Restriction endonuclease-like	coord: 110..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g00740.1	Cp4.1LG18g00740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000710	meiotic mismatch repair
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0006296	nucleotide-excision repair, DNA incision, 5'-to lesion
biological_process	GO:0070914	UV-damage excision repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0070522	ERCC4-ERCC1 complex
cellular_component	GO:0000110	nucleotide-excision repair factor 1 complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003697	single-stranded DNA binding