Cp4.1LG18g00630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACAATCATCCAAAAAAAATTTATAAAACGTACAAAAAGGTTGAAAATTGCTCGATAAGTCGAGAAAAAATTAAGAATATAATGGCTAAGAAGATGATCGTGGTGTTTTTAGTATGTGTTGTGGTGGTATCCGTACTACAATTCTCCACGGCTGACAATACAGCCGAAATGGAAGAAAATTTCAAGTCGTTTTTCGGTAACTTGGACGGTGTGAAAGAAAAATTCAAGTCGTGTGTTGAAACGTGCAGCAAGGGATGTAATAACCAAGCTTCGTGTCATACCGAGTGTGAGACAAATTGTGGCAAAAAAGAAGTTGCTGGTACATTTTTCGATCTCTTTCAATAGTTTAAAAAATTATTTCCAATAAGTTTGTATTAATTTTATTTTTGTACTTCTTTTGCAGATAAGCTTCACATCAATGTGCCGGCACGTTGATTATTGAGGATAGAATGAATAATTTATTTAAATAACGTTCGTGAGAGGAATTCTTAAACTCTTTTAT AACAATCATCCAAAAAAAATTTATAAAACGTACAAAAAGGTTGAAAATTGCTCGATAAGTCGAGAAAAAATTAAGAATATAATGGCTAAGAAGATGATCGTGGTGTTTTTAGTATGTGTTGTGGTGGTATCCGTACTACAATTCTCCACGGCTGACAATACAGCCGAAATGGAAGAAAATTTCAAGTCGTTTTTCGGTAACTTGGACGGTGTGAAAGAAAAATTCAAGTCGTGTGTTGAAACGTGCAGCAAGGGATGTAATAACCAAGCTTCGTGTCATACCGAGTGTGAGACAAATTGTGGCAAAAAAGAAGTTGCTGATAAGCTTCACATCAATGTGCCGGCACGTTGATTATTGAGGATAGAATGAATAATTTATTTAAATAACGTTCGTGAGAGGAATTCTTAAACTCTTTTAT ATGGCTAAGAAGATGATCGTGGTGTTTTTAGTATGTGTTGTGGTGGTATCCGTACTACAATTCTCCACGGCTGACAATACAGCCGAAATGGAAGAAAATTTCAAGTCGTTTTTCGGTAACTTGGACGGTGTGAAAGAAAAATTCAAGTCGTGTGTTGAAACGTGCAGCAAGGGATGTAATAACCAAGCTTCGTGTCATACCGAGTGTGAGACAAATTGTGGCAAAAAAGAAGTTGCTGATAAGCTTCACATCAATGTGCCGGCACGTTGA MAKKMIVVFLVCVVVVSVLQFSTADNTAEMEENFKSFFGNLDGVKEKFKSCVETCSKGCNNQASCHTECETNCGKKEVADKLHINVPAR Homology
BLAST of Cp4.1LG18g00630 vs. NCBI nr
Match: KAG6590395.1 (hypothetical protein SDJN03_15818, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 156 bits (395), Expect = 1.00e-47 Identity = 74/84 (88.10%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Cp4.1LG18g00630 vs. NCBI nr
Match: KAG6590401.1 (hypothetical protein SDJN03_15824, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145 bits (367), Expect = 1.57e-43 Identity = 67/77 (87.01%), Postives = 74/77 (96.10%), Query Frame = 0
BLAST of Cp4.1LG18g00630 vs. NCBI nr
Match: KAG6590396.1 (hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115 bits (288), Expect = 2.34e-31 Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Cp4.1LG18g00630 vs. NCBI nr
Match: KAG6590397.1 (hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114 bits (286), Expect = 4.72e-31 Identity = 54/88 (61.36%), Postives = 69/88 (78.41%), Query Frame = 0
BLAST of Cp4.1LG18g00630 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103 bits (257), Expect = 1.17e-26 Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of Cp4.1LG18g00630 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 7.69e-15 Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Cp4.1LG18g00630 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 7.69e-15 Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Cp4.1LG18g00630 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.59e-14 Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of Cp4.1LG18g00630 vs. ExPASy TrEMBL
Match: A0A0A0KFH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102480 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.59e-14 Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of Cp4.1LG18g00630 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.53e-14 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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