Cp4.1LG18g00170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG18g00170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionIGR domain-containing protein
LocationCp4.1LG18: 308282 .. 314420 (+)
RNA-Seq ExpressionCp4.1LG18g00170
SyntenyCp4.1LG18g00170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAAAATAATAAGGGAACGATAAAAGAATTTACTTTTCTTTTAAAAAAAATCTTTAAACCCTACCCATCTTCATCTTCGTTGTTTCTTTCCATCTCCCATTTTTGCCACTCGCCGGAACGCCTCCACCGCCACGCTGCTTCAGCCTCTCACCGTCACGCCAACTACTGTCTTCTGCTGCATTCCCTTCAGCTATTGTTCTCTCACCGTCGAGGTCTGTTCTGTTCTATTTTTTGTTTCTCCTGTTCAATCAGCTTCTAAGTAGGCTACGTTTGTAACGACTTCAATTTCGAGTTAGAAATCCTGCTAATTCTGATCGATTATTATTTTTTAATCCAAACAAGATTTTAAGTCGTAATGGAGGGAAATGATTGTAAATCCGTTTTGATGTGAAATATTTCTCTCTGTTTCTCTTTTCCTGGGAAGCGTTCAGTCGATTCTCCCACTCTAAGCTATCAAATCCCAATTTCTACCGATTTCGGTGCGGTTGGATAAGCTGTTCGATATTTCCTGCTCTCTTGACTATCAATTTCTACTTCCTAGTGTGATATAGTGGTCGGCCTTTCGAGTATTGGCTATACCATTACAGAATTCGTATATGGGGAAGCATTTGCAGATTTGAGCAATATTTCTGTTCAGTTTCATATTGATATTTCTGTTAAAAAGTATATAGTACAATTGGATTGTGTATTTTACGCAGAAACGAAACTACAACTGAAAACAGAATGAAGGATTGGCTTCAGGGAGAAGTTCTGATTTATTTTTTGGGGCTAGAAAAATTCTTACTCTTTGTGGTGTTATTTTGAATTTAAAGCGAATTAGATGTCGATATTTAGTGGGGTGGAACAAGCATTCTGTTAATTCATAGAGTTCGTTGGAGGTTTTATTTTCGAAGTGTAGAATCAATTGGAGATGCGATTTCAGTTAGAACTACATTTGGTGTGGGTATGAAAAGTGAATGCTAAAAATACATTTGGGCGATTGACCGATGTCTGGTTTATTAACCTCATGAATATTTTTTTTCTTCGTTGCAATTGGATAGGGTAATATTTTCTTTTCTAATCCATATACACTGATCGTTTGTTATTTCATACTACTTATAACCATTCTGAATTAAATTTAAAGGATGAACCTACAGAACTTCAAAACTTCCTGTAAGATACGTCAAAGCTTAAAACCTTTTAGGACCTTGAGAAAATGCATATGATTTGAGACTGATGGATTTTTTGTCCACAGCAAGAAGGATGGCATGGAGGCAGATTATCTCCAACCATAGGTCTATACTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCAAAATCTATCCCATATGTCGGTAAGTGCTTTATTTGTTTTAATTTCTACAAAAATTTTATTCTCATCTGAATCCAAGTAATGAGCCTTATGCTTAATTTGGTTTCTGGAACATGGATAGTAAACTGACTTAGGTTGTCACCCAAAAAGAGGAGAGGAAGAATGTATGGTTTACTGAATGGTTATGTGAATAGGCAAGGAAATGGAGTTTATTTGTTATCTCTTTGTTAAATGAATTTATGGCAGTCTTGTTGTCTGGAAATTTTGTGAGTGGTTTGAGAGGAACTGCAGGGTTTTTGAAATAGTTGAGAGGTCTTCGGAGGTGTTCATCTGGGAGGATGTGAGATTTAATGGGTCATTATATGTGTCTGTTAATTGGATTGTTTATAATTATCAGCTTGGTATCATTCTTTGGATTGACTCGTAGTTGATGATTCCTTTCATGAGCTTTTTTTTTTGTATGTCCTTGTACATTCTCCCATTTTCCCCCATGAAAGTTTGTTTTCTTAGAAAGATACCTTTATTTTCTTAATGGATTTACTGTCTATTAAATGGGAGTGGGAGAAGAAAATATGATCTAAGATTTCCGAAAGTTGAAAAGTATTACTTAATTTTCTGTACAATAAGTCATATTATGCTTAACTAGTATTGTGATCTCTGTCTTGCTTGCCAGTCATCTTGGTTGCTATGATTTCCTTTTGTGTCTGTGATCAGAATTGTTTACTTACTCAGAATCAAAATGAAATCAATTGGAGTCGGAATGTTATTCTTTTCATGTTGTTTACTAGGAGTTATTTGGAATTGGAATCACTAACCCATCGATGTTAAATAATGTAAATCAGAGAGAAAAATTGTAAGACAATTAATAAAAAAGTTGTTGGTCTCATTATAGATGAAATAGAAAGGATTAGGATGTGAAGCAGTTAATGAAAGGTGGTGGACCACAAACTAAAGAATGAGAATGCGATAGATGGAATGAGATTGATGAAGGTTTAGGAGAGGAATGAGAGTACCTCTTTTATGGGGTAGGGATTCCCGAACTAGTGGCGTGTCCCACCTATTGGTTCCAATTTCGGATTCCATAAATACTATCAATGGAAATGAAATTTTCATTTCCATTTCCATTCCTTGATTACCATTCCGTTGAAGTAAATGGGGCCTAAGTGTCTGAGTTTGGAGTCAATAAGATAAGATATATATGCGCTTGATTTTTTCACATTTATGTTCTAGTGAAGGTCGGGATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACACGTGGCTAAACTTGAATCAGAGATCGGTGACTTCCAGAAGCTGCTTGTTACACGCACACTTAAGCTTAAAAAACTCGGAATTCCATGCAAACATGTAAGTATTTCCTTAGCCTGATTCTCATTATTGTTTTTGTAAGTACAAGACTTGGACTTGTTTTATCGCCAAAATAACTAAAGGGATAGGCATTGGCTCATTAACCTGTATTTGATAAGCTTTCTGGAGGTTGCAACTCTAGTAACCAAGAGCATTCCTTCTTTCTTCTGCATATAACTTTTTTGGTGTTAATTTTAGGTAGCTAGTCTAGTCGTTATAATGTATTTTCATTTTTTTCTGCCACTTTAATGATTCCCACTGAACTCTTGTTACAAGAGTTGGACCAGGTCTATTGTTTGTTTTGCCAAAAGACACACACGATACTGTCTTTTAGTTCTTTCTAGATATTACTATACATAAAAAACATATAAATGAGGTGGGAGTGACAGCTTGTGTAGGTCTAGAGCAAAATGATTAAAAAAAAGAAGCATTCACAAGTGTTGGTGCAAGTATACACTCTCGCAGCAATAAGCAATAAGTAGAGTGTCAAGTTCTCAAGGAACCTATTTTTTGGTTACTTCTATTGCTATAAAATTAGATGAGTTCAAGTGTGGATGTGTCGATGCATGTATAATATCAAGAATTTCAGAATATAACTATGCTATCACAAATAGTGGGTGAATGAGACATTTAACAACAATGAGCTAAGGCTAGGAGAGTTGGAATAGAGAAGTTGCTGAAATTTTATGGTGAATTCTGCTCTTTTTAACATATATTCAAGCCCCCTTCCGAGAGTCTTTCATATTGGTTACTCCCATAACCATTTCAAAAGTTTATGTTAAAAGAAAAGCTCTAGGAGAAGACTTATGTCTAAACCTTCCATTACCTTAAGGAAAGCCTTGCAATGGAACTAGAGCGTTAAAGGGGGGTTCACTTGTGCTCTATCTTTCCAGATAAGAGAAACAACTATGAGAGCAGAGTGGCCAACTAAACACACAATTTTTACTAATAACAACTCTTTAATAAACAGAAATCACACATTCAGAATACTTCAGCTACAGCCACACCTCCTGCCTTACGCATACAATTTAGCTCCACATATTCATTTGTTTATACAACAAGTTCTATCTTAGTCATAGAGCATATAACAGATTAAAGGAAAGGAGAATAAGAGAGTTATCAAGATTCCTGCTGCAGCTCTTTGATGAAAGCTTCCACGAGTTGGTCTCCTTATTCCTCTCTTCCTTATCCTGTATTCCTTTAGCTTCCCTTTTCTTGTGTCTTCTGCTTTATGCTACCTTTCTTTCCGTGGCTCCCTCTCTTTTTCTCCCCCTTTCTTTTTTTGGGAGCTTTCCTTTTATAGGCTTCCTTGCTTACATTTAAGGTTGAAAAAAGATTAGTCATCCACATAGGTAGCCTCCTATTGGTTTGTTACGTATCCGCGTGGTTTGTTGCTTCGAATTAAAGGCCCATGTGTCCTTGTCGACAGGAATTGCCTCAAGAGTTGCTTCAGCACATGGTTCAACATATTGGTCCAGCCATTTCATCACCAACATAATTGCTTTTAGATTTGCTTTAGCATAATGGTTTGGCTACTCTCTAAAATAAAATAGATTAAGCATACAAGTAGACTAGATTTATCAAAGGACCATAATGAGCTATTTCATGCTAATTAATTAGTGTATATGAGATAACTAATGAGATAACTAATGAGAGAATGTTGAGTATGTGTGCAAGATTATTAACAAAATGACTCGATATAACTCTACTTTTGGAGAGTTGTTAGGGAGAACGATAGTTTCTTTTAAAATTCTCTTGAAGTGTAAACTAGCTCTTTACTATTTTTAATATTTATATAAATATAATATTTATGGATTATTTTCTCTTTTCAAAGTTGGAAGTAGGTAAACATTTTACTTTTCTATAGTCGAAGAAACTAAAATAATTAAAATGGGTTTAAAGTTTCATATACAAGCTTTTATGAACTTTATACTGATACTTTAGTTTTCACAATAGAATAGCTTTAATTAGACTTCAGATCGTTGATATTAAAATGTAATAAATAAGTTTGTTCTTCAGCTCTTTAGTTGTGGGATTATTAGTTCGGTAAGAATTTGTAGGCTGTGTAACTTGAGTTTTGGTCACTTCTTAGGTTTAACGTCTCTTTATAGACTTTGGTTTTTAACAAGTTTTGTTCTTACTCTAGTTATTATTGTTTTGGATTGGAGCCCTTTTATATAGTTAGCTTTGTGGCTCCTTTTGCTACGTTTCCTTTATGTAGGCCCTTTTATATTTGTTTTTATTTCATGTTCTCTTGATAAAAGCGTAGTTTCTTATAAAGAGAAGAATATAGTGTCAAGGAAATATTTGGCTTGTGGCATTGAAGTGAAAATCTGATTACAAATGGCTAGTTAAATAGCATGCATATCTTTGATGTTGAATATTTTTTTTTATCACCAATTTAACTAAACCAAGGAAAGTTACATGTGCAATTACTAGTCTTAGTCTAATGGTACCTACCATCGTCGAAGCTGGTTCAGATGCAACCCCTTTGGGTAAGATCTGTCTAGAATAAAATTATTTGATACTCTATAGATATGCAGTTAGATGCATAAAAAAAATGCTTCCATTCTTGCAGATCTCACTTCATTTCCATAAGTGTACAGAGATCTACAATTCCCCCATTTAGTTATCTTATACAGTTACTGGATTCACACCCCTTTCCCGCTTTCAAGTTTGTTGGTACAGAAAGGGTCCCACACTTACATCACACCTGTTACCTGCTAGTTTCCGCCCTGCTCTCTTTCTGCTAAATTAATCAGTAGTAGTGGGTCTATCAATACCTCACTGCTGACTTCAAATCTCAGTCATGATTATTGAGGAATACAAGTTTTTGCAAGAGAATTTTTTTTTTTATAGATATCTCGTATTTGATTTAGAACAAATATTGGTTTGAATAATGTCTTCACAATGGTGCTTGTTGGCCTAAATTTTCATGTCTGTGGCAGAGGAAGCTGATATTGAAGTACACTCACAAGTACAGACTTGGACTATGGAGGCCTCGTTCTGATGCCTTGAAGGCGTGATGGGTTTAGCTATGTTTACGAGGTGAATGGAATTGTTAGCTGATCCTCGGACCTCAGTTTGTAGAACTTTGAAGGATAGCATTTCATTTTCTAAATCTAAAGCATATCCTTATTTTGCTGCTTTTGAATTGTTTCTATTCATTTACTAAACTATATACGCATTCAGTTCATTTAAGATCATGCATGAATCTTAAATCTAATAAGTGAACTGAGAGTTCAAATTTATATCATCTGCATGACCGGAACAAACGAATTCTGGTAAGTTGGTGTCTGTTCTCTCCAGAACTTTTGTTTTATAGATTCAGTCAAAATTGTAAAATTAAGTCATCCTATGAGAAGCAAGGGGCCTATGATAGATAGAGATTATGAGCCCAATCAAAAGCTCTTCAGAGCGCCCATTTTGGGTTCGATTCT

mRNA sequence

CGAAAATAATAAGGGAACGATAAAAGAATTTACTTTTCTTTTAAAAAAAATCTTTAAACCCTACCCATCTTCATCTTCGTTGTTTCTTTCCATCTCCCATTTTTGCCACTCGCCGGAACGCCTCCACCGCCACGCTGCTTCAGCCTCTCACCGTCACGCCAACTACTGTCTTCTGCTGCATTCCCTTCAGCTATTGTTCTCTCACCGTCGAGCAAGAAGGATGGCATGGAGGCAGATTATCTCCAACCATAGGTCTATACTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCAAAATCTATCCCATATGTCGGTCGGGATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACACGTGGCTAAACTTGAATCAGAGATCGGTGACTTCCAGAAGCTGCTTGTTACACGCACACTTAAGCTTAAAAAACTCGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACTCACAAGTACAGACTTGGACTATGGAGGCCTCGTTCTGATGCCTTGAAGGCGTGATGGGTTTAGCTATGTTTACGAGGTGAATGGAATTGTTAGCTGATCCTCGGACCTCAGTTTGTAGAACTTTGAAGGATAGCATTTCATTTTCTAAATCTAAAGCATATCCTTATTTTGCTGCTTTTGAATTGTTTCTATTCATTTACTAAACTATATACGCATTCAGTTCATTTAAGATCATGCATGAATCTTAAATCTAATAAGTGAACTGAGAGTTCAAATTTATATCATCTGCATGACCGGAACAAACGAATTCTGGTAAGTTGGTGTCTGTTCTCTCCAGAACTTTTGTTTTATAGATTCAGTCAAAATTGTAAAATTAAGTCATCCTATGAGAAGCAAGGGGCCTATGATAGATAGAGATTATGAGCCCAATCAAAAGCTCTTCAGAGCGCCCATTTTGGGTTCGATTCT

Coding sequence (CDS)

ATGTCGGTCGGGATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACACGTGGCTAAACTTGAATCAGAGATCGGTGACTTCCAGAAGCTGCTTGTTACACGCACACTTAAGCTTAAAAAACTCGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACTCACAAGTACAGACTTGGACTATGGAGGCCTCGTTCTGATGCCTTGAAGGCGTGA

Protein sequence

MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALKA
Homology
[Close]
BLAST of Cp4.1LG18g00170 vs. NCBI nr
Match: XP_038879496.1 (uncharacterized protein LOC120071346 isoform X3 [Benincasa hispida])

HSP 1 Score: 150 bits (378), Expect = 1.64e-45
Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
          MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK
Sbjct: 1  MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60

Query: 61 YRLGLWRPRSDALK 74
          YRLGLWRPRSD+LK
Sbjct: 61 YRLGLWRPRSDSLK 74

[Close]
BLAST of Cp4.1LG18g00170 vs. NCBI nr
Match: XP_022961412.1 (uncharacterized protein LOC111461991 [Cucurbita moschata])

HSP 1 Score: 149 bits (377), Expect = 6.26e-45
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK
Sbjct: 34  VKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 93

Query: 61  YRLGLWRPRSDALKA 75
           YRLGLWRPRSDALKA
Sbjct: 94  YRLGLWRPRSDALKA 108

[Close]
BLAST of Cp4.1LG18g00170 vs. NCBI nr
Match: KAG7024029.1 (hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149 bits (377), Expect = 6.26e-45
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK
Sbjct: 34  VKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 93

Query: 61  YRLGLWRPRSDALKA 75
           YRLGLWRPRSDALKA
Sbjct: 94  YRLGLWRPRSDALKA 108

[Close]
BLAST of Cp4.1LG18g00170 vs. NCBI nr
Match: XP_023516779.1 (uncharacterized protein LOC111780577 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149 bits (377), Expect = 6.26e-45
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK
Sbjct: 34  VKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 93

Query: 61  YRLGLWRPRSDALKA 75
           YRLGLWRPRSDALKA
Sbjct: 94  YRLGLWRPRSDALKA 108

[Close]
BLAST of Cp4.1LG18g00170 vs. NCBI nr
Match: KAG6590496.1 (hypothetical protein SDJN03_15919, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149 bits (377), Expect = 1.20e-44
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK
Sbjct: 55  VKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 114

Query: 61  YRLGLWRPRSDALKA 75
           YRLGLWRPRSDALKA
Sbjct: 115 YRLGLWRPRSDALKA 129

[Close]
BLAST of Cp4.1LG18g00170 vs. ExPASy TrEMBL
Match: A0A6J1HA49 (uncharacterized protein LOC111461991 OS=Cucurbita moschata OX=3662 GN=LOC111461991 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 3.03e-45
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK
Sbjct: 34  VKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 93

Query: 61  YRLGLWRPRSDALKA 75
           YRLGLWRPRSDALKA
Sbjct: 94  YRLGLWRPRSDALKA 108

[Close]
BLAST of Cp4.1LG18g00170 vs. ExPASy TrEMBL
Match: A0A6J1HZ75 (uncharacterized protein LOC111467943 OS=Cucurbita maxima OX=3661 GN=LOC111467943 PE=4 SV=1)

HSP 1 Score: 148 bits (373), Expect = 1.23e-44
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK
Sbjct: 34  VKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 93

Query: 61  YRLGLWRPRSDALK 74
           YRLGLWRPRSDALK
Sbjct: 94  YRLGLWRPRSDALK 107

[Close]
BLAST of Cp4.1LG18g00170 vs. ExPASy TrEMBL
Match: A0A1S3BPD9 (uncharacterized protein LOC103492108 OS=Cucumis melo OX=3656 GN=LOC103492108 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 2.91e-43
Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFLNG+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK
Sbjct: 34  VKVGIPEFLNGIGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 93

Query: 61  YRLGLWRPRSDALKA 75
           YRLGLWRPR D+LK+
Sbjct: 94  YRLGLWRPRFDSLKS 108

[Close]
BLAST of Cp4.1LG18g00170 vs. ExPASy TrEMBL
Match: A0A6J1EUK8 (uncharacterized protein LOC111437735 OS=Cucurbita moschata OX=3662 GN=LOC111437735 PE=4 SV=1)

HSP 1 Score: 143 bits (361), Expect = 6.95e-43
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK
Sbjct: 28  VKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 87

Query: 61  YRLGLWRPRSDALKA 75
           YRLGLWRPR+D +KA
Sbjct: 88  YRLGLWRPRADLVKA 102

[Close]
BLAST of Cp4.1LG18g00170 vs. ExPASy TrEMBL
Match: A0A0A0M1A4 (IGR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G555610 PE=4 SV=1)

HSP 1 Score: 143 bits (361), Expect = 8.61e-43
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFL G+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK
Sbjct: 35  VKVGIPEFLTGIGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 94

Query: 61  YRLGLWRPRSDALKA 75
           YRLGLWRPR D+LKA
Sbjct: 95  YRLGLWRPRFDSLKA 109

[Close]
BLAST of Cp4.1LG18g00170 vs. TAIR 10
Match: AT5G26800.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 130.2 bits (326), Expect = 7.0e-31
Identity = 58/75 (77.33%), Postives = 70/75 (93.33%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFL+G+G GVE+H+AKLE+E+GD  KLLVTRTL+LKK GIPCKHRKLILKY+HK
Sbjct: 38  VKVGIPEFLSGIGGGVETHIAKLETELGDLPKLLVTRTLRLKKFGIPCKHRKLILKYSHK 97

Query: 61  YRLGLWRPRSDALKA 76
           YRLGLW+PR+DA+KA
Sbjct: 98  YRLGLWKPRADAIKA 112

[Close]
BLAST of Cp4.1LG18g00170 vs. TAIR 10
Match: AT3G05810.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26800.1); Has 62 Blast hits to 62 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 126.7 bits (317), Expect = 7.8e-30
Identity = 57/75 (76.00%), Postives = 67/75 (89.33%), Query Frame = 0 

Query: 1   MSVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHK 60
           + VGIPEFL G+G G E+H+AK+E+EIGD  KLLVTRTL+LKKLGIPCKHRKLILKY  K
Sbjct: 38  VKVGIPEFLGGIGRGAETHIAKIETEIGDLHKLLVTRTLRLKKLGIPCKHRKLILKYGQK 97

Query: 61  YRLGLWRPRSDALKA 76
           YRLGLW+PR+DA+KA
Sbjct: 98  YRLGLWKPRADAIKA 112

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g00170 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG18g00170 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038879496.11.64e-4598.65uncharacterized protein LOC120071346 isoform X3 [Benincasa hispida][more]
XP_022961412.16.26e-4597.33uncharacterized protein LOC111461991 [Cucurbita moschata][more]
KAG7024029.16.26e-4597.33hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023516779.16.26e-4597.33uncharacterized protein LOC111780577 [Cucurbita pepo subsp. pepo][more]
KAG6590496.11.20e-4497.33hypothetical protein SDJN03_15919, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cp4.1LG18g00170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HA493.03e-4597.33uncharacterized protein LOC111461991 OS=Cucurbita moschata OX=3662 GN=LOC1114619... [more]
A0A6J1HZ751.23e-4497.30uncharacterized protein LOC111467943 OS=Cucurbita maxima OX=3661 GN=LOC111467943... [more]
A0A1S3BPD92.91e-4392.00uncharacterized protein LOC103492108 OS=Cucumis melo OX=3656 GN=LOC103492108 PE=... [more]
A0A6J1EUK86.95e-4392.00uncharacterized protein LOC111437735 OS=Cucurbita moschata OX=3662 GN=LOC1114377... [more]
A0A0A0M1A48.61e-4392.00IGR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G555610 PE=4 SV... [more]
BLAST of Cp4.1LG18g00170 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G26800.17.0e-3177.33FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT3G05810.17.8e-3076.00FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019083IGR protein motifSMARTSM01238IGR_2coord: 5..64
e-value: 6.1E-23
score: 92.2
IPR019083IGR protein motifPFAMPF09597IGRcoord: 7..64
e-value: 2.2E-18
score: 66.1
NoneNo IPR availablePANTHERPTHR34955IGR MOTIF PROTEINcoord: 2..75
NoneNo IPR availablePANTHERPTHR34955:SF2IGR MOTIF PROTEINcoord: 2..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g00170.1Cp4.1LG18g00170.1mRNA