Cp4.1LG17g11370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g11370
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	S4 RNA-binding domain-containing protein
Location	Cp4.1LG17: 8626343 .. 8631014 (-)
RNA-Seq Expression	Cp4.1LG17g11370
Synteny	Cp4.1LG17g11370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAGCATGTTGAATAAATTGTGTTAATTCAACCAAGATTTAACCTAGAACCTCTTTTAAATCCTATGCTTCATGTTCGTGTATGAACTTCAAGCTTTGCTGAAGTTCCATTCTTATCGGGAGACCGAAATCTTCGTGGAGTAGGCAATAAGATAGAATTTTCATAATCGTGTGAAGAAACGACGCCCCATCATGTCGAAATGCTTACTGAGTCGAAACAATTTTGCGAGGATTTTTCTCGTGTCGCCGCCAACTTGCTGCCGGATTCATTCTGCTTCTCCTAAAGCCTTTTCCGTCGCCAAACCGGGAAAGATTCAGTCTCTGAATTTGTAAGGATTTTTGGTTTCAATCTGTTCCGCAATTTCGAAATATCTGTTTGCAAGTGGGAATGAAGATGTTTTTGTGTTAATTAGGAAAAAGAAGAAGAGATTGGACGAGATGTGTGTTGAAAGGTATCAGCAGTACAGCCGAACAATCATACAATCGTGGATATTACAAGGTAACTTCGATTGAATTTGTCGATGACGATGACGAACTTCAGTTCATTTTCGAATTCCTTTACTTTCTGTGTTTCATAGATGAATTTCTATGCAGGTAAAGTATTGGTAGATGGCAAAGTAGTCAGTAAAGCCGGAACACCCGTCGGCGATAAAGCTAAGGTCGAGATAATTGCCGAAGTTCCGAAATATGTATGTAGGTGATAAAACTTAGCTGAAAACTTCCTGTTGTTCCTTGGATTAAACAGAGTCTCAGAAGTTAATCCAAACTTCTTTTTTTGCTGTAATTTCACAATTTCACGAAATCCAGAGCAGGATTCAAGTTGGAAGCTGCCATTGAACAGCTCGGTGTTGATGTTGATGGTAAAGTTGCTCTTGATGCTGGATTATCCACCGGAGGATTTACTGACTGTTTACTTCAACATGGGGCTTCATTTGTTTATGGAGTCGATGTTGGCTATGGGCAGGTACAATTTTTAAAATTTATTCCTAACGCATTGATCTTTAACTACTTAATATTGTTTACAGTTGATGAATGCGCAAATAGTTATCTCCAATAGAATTAAAGTACTACCACTCATATTTTTCTTGAAAGTTTGACTAAATTTCATTGACTTGGCTATAAACAATCGAATTGAATAAGTGGTACTTCAGAAGGGAAATGACTAGGAAGTAAATCTGCTGGCTTAAGAGATCAGAAAAGATCATCCAACTAATCAAATATAGTAACAAGTGTATGCTTAACCCAGTCGGTCGATAAACCGTTGTTTACTGTTGCTGCCCTCTTTTTATGTGGGAAACTAGCAAATAATGCCTCCCACACTTTCTTCTATTCCACTGTGATACGTCATTGATCTGCAGAATTTTTAGGTTGCTGACAAGATACGTCGAGATGAACGTGTTTGTGTGATGGAAAGAACGAACTTACGGTATCTTGCTGGACTTCCTCAAAAAGTTGATATTGTGACTCTGGACCTTTCTTTTATCTCTATTCTCTTGGTAAGGTTTCAGATACTTTTCACAACTGTTTGTTTAATCTAACTTTGATAGCAGGGAAACATTTTTGGTTTTTTAAGCTGAAAAAGAAAACAATTTTCCTTTCATTTGCCGTCAAGATATTCTTTGGCAAATAACTATTGAGAATACTTTTCCTACTTTATGTACAGATCTGGTTTGGCTGAATATCTGTGAACAAATATTTGGTGTTTTTGTATCACTGCCCCACTGAAGTATTTTATATTCTTGACCAGTTCTATTCTCAATAAGTTGTGAATATACCGTGTGGCATGCAAAACAAATCTTTTGCTTTGTTGTTTCTCTAAAACATGCTTAGCTGCAGAACTAAATGAAAATTTCCATTTCTAGGATACCAAAAGAAGAAGGTGCAAAAAGAGATCTCATGTCTTAAGAATAAGCTCATATTAATTTGGTAGTTTTCCGATCTTGACATCTGAAATTTGGGGATTAAAAGTCTCGGGATGTGAGCGAGGAAATTAGAATTTTGGGAGTTAGGTGTCTGTAGCTAATTAATGTGCACATAAACAACTTTTCTTTACACAATTCTTTTCCTTTTAAAGTCGTTTTTTTTTTCCTTTAAATGAAGTTATGGAGTATGAATAATGACCACAGACTTGACGTTTCTCATTGTATTGTAGCTCCTTATTGGCTATCTTATTTTAATTAGTTTGGTCTGGTCAAATATAAGTATGGTTTATACCATAGTATAAATTTGGTCACTAGTCACTAGCGCCTTGATTTTGAACAAAAGGTCTTGCAATGGTCATTTTAAGACTTTTGTTTTTCTCTTATTCCATTTGTTTGCATACTCTTATTTGTTTATGTATCAGGTCATGCCTGCTGTGGTCAATGTAATGAAGGAAACGTCAACAATTGTTACTTTGGTGAAACCTCAATTTGAATGTCGTCGATCACAAGTAAGAAGGCTCTGAGTTCTTTCCCTTCTTGAGTGTGGCAGTTCCCTTATGTATTGACTGCTTTTTTGGTTAGCATTATAGGTAATATGTCTAATTAAGACCTTCAACCACTTTTGTTTAGATGATGTGACCCAATTAACCTAGGTCACCTTCCTCTTCCACCGATTTCAAAGGATGTAATCTTGAAAAGCTAGCAGCCGTTGATGAAGTTTCAAATATGGAGAAATGGTGAATGGGAATGTAAAAGAACATTGACTGAAAAAGTACCGATCTTCCTTTCCTTCAATGATGGCTTTCTTCCACCTTTCTAGTCCCACACTCTTACTGTCACTTAGACTATTAGTCTCAAAAGGGAAGGCTATTCCACTTGGTTTTATCCTTTTGGATTGGAACCCCTTCTTGTAGTTAATCTTGGGATTCCTTTTGTGGGTTTGTGCTGTGTAGACCCTTTCATATTTCTTTCATCTACTACATCTCATCTATAAAGAATTGACCAACATCTTCCTTTTTCAGTTTATTTGCATCCGGCTTAGCTCGTACTAGTAAGAAGGTGTTTCCAAAAGAGGACGAAACCTATCTAAGATCTTGTGTGCCGGCTTAGTAGCGCATAAGCAGAACACATAGCCTAGAATTTAGTATTCAACCAACCTATGAGCTTTTGCCCAAGCTCATCTTTTCCTACAATATCAACGTGGTCTCGAAGAGGCTTTTCACCAAAAAGAAAAAAAAAAAGAAAAAAAGAAAAAAAGAGGAGGCTATTCGAGTCGCTTCTTAAATAGAGAATTGAACATGTCACAGGTGCAATTATGCATAGGACGTCCATGTAATTGGTTGGTAATCCTCATTCATATTAAAACAATTGATGCCATAAGTGAAAGTTCTGTATGTGATAATCCTAGGGCATAATATCTTGAAAGGTAGCAGGCTCGTGTTAGTGGATGCTGACCTTGGCTCGCACCTATGCTATCATTTTATAATCTACTGATAATCATGGAAACCAGGCATCTTGTAAAAATAGACGAAATTATGAAAACTCAGTGATAAAATAGATATCTAACACAATAAGTTTATGTTAACCATTCATTTGAAGATATGGTTTTTTGCAGGTAGGAGGTAAGGGAATCGTGAGAGATCCACAAGTTCACCAGGAGGTAAACATTTTTCCTTCCTTTATTCCTATTTAATTTAAGATGTTTTGTTCCTTTGTACCCTGCTTTGAGAGATAATTCATGTTACTGAAGTTCTCTAATTGGAATTAATTCTTGGTTTATCTTGAGATTATCACTTCTGAGGTTGAGCACAGTTATTAGATCATCTATGCACTATAAAAAGTTTGTATACATGGTGACACGTTATTTAAATCTAGGACACGAACACAACGAACTCAACAAAGATACGTTTACTAAAGTATATGTCATTTTTATATAATAAGAACATTTAAAGTTAACAAGGCTATGACACTTATATGTGATTAAAATATTATTTTTGTCCTATGTAATTATTTGTCCATTTGTTATTCTGAATGTAACAGCCTAAACTCACTAAAACTCACTGATGATAAATATTATCATCTTTGAATTTTCCCTTTCGGGCTTCCTCTCAAGGTTTTTATTATGAGATCTCACATCGGTTGGGGAGGAGAACAAAACATTCTTTACAAGGGTAAGAAAACCTCTCCCTAACAGACCTGTTTTAAAAACCTCGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATCTACCAACGGTGAGCTTGGGCTGTTTCACTCAAACAAGATACAAGATACATGCTTAACAAATGCAGAATTCTTATGGGCTTTAATTGATAGGATAGGATGAATGAAGAATGTAGCTCACACCATGGTTGTTGAATAATGACTGTAGGTTCTTGATAAGATCATAAAGGGTGTGGAGAGTTTTGGATTCTGCAGCAAAGGTTGGATTGAATCGCCATTGAAGGGCGCTGAGGGTAATACAGAGTTTTTGGTTTGTTTTACCAGGACAACACTTTCTGCTGCAAACCAAGATTGATCGTTCATCCAGATCTTAATCTAGTTCAACCAGCAGTTTCTGGGCCTTAATCTCTGTAATTCACTTCATTGAATGATGTTCATCTAGTTTTTACTTATTTAATATAGAAAATATTCGTGCATTTCGTATCTTCGTTTGAATGGTATCGAGTAATTATTTGGAACGCAAAATTATTGATGTATCGATTTATTAGCAATGATTGACA

mRNA sequence

CATAGCATGTTGAATAAATTGTGTTAATTCAACCAAGATTTAACCTAGAACCTCTTTTAAATCCTATGCTTCATGTTCGTGTATGAACTTCAAGCTTTGCTGAAGTTCCATTCTTATCGGGAGACCGAAATCTTCGTGGAGTAGGCAATAAGATAGAATTTTCATAATCGTGTGAAGAAACGACGCCCCATCATGTCGAAATGCTTACTGAGTCGAAACAATTTTGCGAGGATTTTTCTCGTGTCGCCGCCAACTTGCTGCCGGATTCATTCTGCTTCTCCTAAAGCCTTTTCCGTCGCCAAACCGGGAAAGATTCAGTCTCTGAATTTGAAAAAGAAGAAGAGATTGGACGAGATGTGTGTTGAAAGGTATCAGCAGTACAGCCGAACAATCATACAATCGTGGATATTACAAGGTAAAGTATTGGTAGATGGCAAAGTAGTCAGTAAAGCCGGAACACCCGTCGGCGATAAAGCTAAGGTCGAGATAATTGCCGAAGTTCCGAAATATGTATGTAGAGCAGGATTCAAGTTGGAAGCTGCCATTGAACAGCTCGGTGTTGATGTTGATGGTAAAGTTGCTCTTGATGCTGGATTATCCACCGGAGGATTTACTGACTGTTTACTTCAACATGGGGCTTCATTTGTTTATGGAGTCGATGTTGGCTATGGGCAGGTTGCTGACAAGATACGTCGAGATGAACGTGTTTGTGTGATGGAAAGAACGAACTTACGGTATCTTGCTGGACTTCCTCAAAAAGTTGATATTGTGACTCTGGACCTTTCTTTTATCTCTATTCTCTTGGTCATGCCTGCTGTGGTCAATGTAATGAAGGAAACGTCAACAATTGTTACTTTGGTGAAACCTCAATTTGAATGTCGTCGATCACAAGTAGGAGGTAAGGGAATCGTGAGAGATCCACAAGTTCACCAGGAGGTTCTTGATAAGATCATAAAGGGTGTGGAGAGTTTTGGATTCTGCAGCAAAGGTTGGATTGAATCGCCATTGAAGGGCGCTGAGGGTAATACAGAGTTTTTGGTTTGTTTTACCAGGACAACACTTTCTGCTGCAAACCAAGATTGATCGTTCATCCAGATCTTAATCTAGTTCAACCAGCAGTTTCTGGGCCTTAATCTCTGTAATTCACTTCATTGAATGATGTTCATCTAGTTTTTACTTATTTAATATAGAAAATATTCGTGCATTTCGTATCTTCGTTTGAATGGTATCGAGTAATTATTTGGAACGCAAAATTATTGATGTATCGATTTATTAGCAATGATTGACA

Coding sequence (CDS)

ATGTCGAAATGCTTACTGAGTCGAAACAATTTTGCGAGGATTTTTCTCGTGTCGCCGCCAACTTGCTGCCGGATTCATTCTGCTTCTCCTAAAGCCTTTTCCGTCGCCAAACCGGGAAAGATTCAGTCTCTGAATTTGAAAAAGAAGAAGAGATTGGACGAGATGTGTGTTGAAAGGTATCAGCAGTACAGCCGAACAATCATACAATCGTGGATATTACAAGGTAAAGTATTGGTAGATGGCAAAGTAGTCAGTAAAGCCGGAACACCCGTCGGCGATAAAGCTAAGGTCGAGATAATTGCCGAAGTTCCGAAATATGTATGTAGAGCAGGATTCAAGTTGGAAGCTGCCATTGAACAGCTCGGTGTTGATGTTGATGGTAAAGTTGCTCTTGATGCTGGATTATCCACCGGAGGATTTACTGACTGTTTACTTCAACATGGGGCTTCATTTGTTTATGGAGTCGATGTTGGCTATGGGCAGGTTGCTGACAAGATACGTCGAGATGAACGTGTTTGTGTGATGGAAAGAACGAACTTACGGTATCTTGCTGGACTTCCTCAAAAAGTTGATATTGTGACTCTGGACCTTTCTTTTATCTCTATTCTCTTGGTCATGCCTGCTGTGGTCAATGTAATGAAGGAAACGTCAACAATTGTTACTTTGGTGAAACCTCAATTTGAATGTCGTCGATCACAAGTAGGAGGTAAGGGAATCGTGAGAGATCCACAAGTTCACCAGGAGGTTCTTGATAAGATCATAAAGGGTGTGGAGAGTTTTGGATTCTGCAGCAAAGGTTGGATTGAATCGCCATTGAAGGGCGCTGAGGGTAATACAGAGTTTTTGGTTTGTTTTACCAGGACAACACTTTCTGCTGCAAACCAAGATTGA

Protein sequence

MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERYQQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQLGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIVRDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD

Homology

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BLAST of Cp4.1LG17g11370 vs. ExPASy Swiss-Prot
Match: P19672 (Putative rRNA methyltransferase YqxC OS=Bacillus subtilis (strain 168) OX=224308 GN=yqxC PE=3 SV=3)

HSP 1 Score: 184.1 bits (466), Expect = 2.3e-45
Identity = 105/242 (43.39%), Postives = 145/242 (59.92%), Query Frame = 0


Query: 48  KKKRLDEMCVERYQQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYV 107
           KK+RLD + VER    +R   +  I+ G V  +   + K G  +     + +     +YV
Sbjct: 4   KKERLDVLLVERGLAETREKAKRAIMAGIVYSNENRLDKPGEKIDRDLPLTVKGNPLRYV 63

Query: 108 CRAGFKLEAAIEQLGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIR 167
            R G KLE A+++  V V  K+ +D G STGGFTDC LQ+GA   Y VDVGY Q+A K+R
Sbjct: 64  SRGGLKLEKALKEFPVSVKDKIMIDIGSSTGGFTDCALQNGAKQSYAVDVGYNQLAWKLR 123

Query: 168 RDERVCVMERTNLRYLA------GLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVT 227
           +DERV VMERTN RY        G+P   +  T+D+SFIS+ L++P +  ++   S  + 
Sbjct: 124 QDERVVVMERTNFRYATPADFTKGMP---EFATIDVSFISLRLILPVLRTLLVPGSDCMA 183

Query: 228 LVKPQFECRRSQVGGKGIVRDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEF 284
           LVKPQFE  R  VG KGIVRDP+VH +VL ++I    + G+  KG   SP+ G +GN EF
Sbjct: 184 LVKPQFEAGRESVGKKGIVRDPKVHADVLKRMISFSAAEGYICKGLSFSPITGGDGNIEF 242

[Close]

BLAST of Cp4.1LG17g11370 vs. ExPASy Swiss-Prot
Match: P9WJ62 (16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=tlyA PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.1e-39
Identity = 97/241 (40.25%), Postives = 133/241 (55.19%), Query Frame = 0


Query: 46  LKKKKRLDEMCVERYQQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPK 105
           + ++ R+D   V R    SR      I  GKV +DG    K  T V D   + ++ +  +
Sbjct: 1   MARRARVDAELVRRGLARSRQQAAELIGAGKVRIDGLPAVKPATAVSDTTALTVVTDSER 60

Query: 106 -YVCRAGFKLEAAIEQLGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVAD 165
            +V R   KL  A+E   + V G+  LDAG STGGFT+ LL  GA+ V   DVGYGQ+A 
Sbjct: 61  AWVSRGAHKLVGALEAFAIAVAGRRCLDAGASTGGFTEVLLDRGAAHVVAADVGYGQLAW 120

Query: 166 KIRRDERVCVMERTNLRYLA--GLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTL 225
            +R D RV V+ERTN R L    +  +VD+V  DLSFIS+  V+PA+V      + IV L
Sbjct: 121 SLRNDPRVVVLERTNARGLTPEAIGGRVDLVVADLSFISLATVLPALVGCASRDADIVPL 180

Query: 226 VKPQFECRRSQVGGKGIVRDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFL 284
           VKPQFE  + QVG  G+V DPQ+    +  + +  +  G+ S G   SPL G  GN E+ 
Sbjct: 181 VKPQFEVGKGQVGPGGVVHDPQLRARSVLAVARRAQELGWHSVGVKASPLPGPSGNVEYF 240

[Close]

BLAST of Cp4.1LG17g11370 vs. ExPASy Swiss-Prot
Match: P9WJ63 (16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=tlyA PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.1e-39
Identity = 97/241 (40.25%), Postives = 133/241 (55.19%), Query Frame = 0


Query: 46  LKKKKRLDEMCVERYQQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPK 105
           + ++ R+D   V R    SR      I  GKV +DG    K  T V D   + ++ +  +
Sbjct: 1   MARRARVDAELVRRGLARSRQQAAELIGAGKVRIDGLPAVKPATAVSDTTALTVVTDSER 60

Query: 106 -YVCRAGFKLEAAIEQLGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVAD 165
            +V R   KL  A+E   + V G+  LDAG STGGFT+ LL  GA+ V   DVGYGQ+A 
Sbjct: 61  AWVSRGAHKLVGALEAFAIAVAGRRCLDAGASTGGFTEVLLDRGAAHVVAADVGYGQLAW 120

Query: 166 KIRRDERVCVMERTNLRYLA--GLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTL 225
            +R D RV V+ERTN R L    +  +VD+V  DLSFIS+  V+PA+V      + IV L
Sbjct: 121 SLRNDPRVVVLERTNARGLTPEAIGGRVDLVVADLSFISLATVLPALVGCASRDADIVPL 180

Query: 226 VKPQFECRRSQVGGKGIVRDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFL 284
           VKPQFE  + QVG  G+V DPQ+    +  + +  +  G+ S G   SPL G  GN E+ 
Sbjct: 181 VKPQFEVGKGQVGPGGVVHDPQLRARSVLAVARRAQELGWHSVGVKASPLPGPSGNVEYF 240

[Close]

BLAST of Cp4.1LG17g11370 vs. ExPASy Swiss-Prot
Match: Q06803 (Hemolysin A OS=Brachyspira hyodysenteriae OX=159 GN=tlyA PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-38
Identity = 93/238 (39.08%), Postives = 131/238 (55.04%), Query Frame = 0


Query: 51  RLDEMCVERYQQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRA 110
           RLDE         SR+  Q  IL G V V+G  V+     + D   +E++  + KYV RA
Sbjct: 2   RLDEYVHSEGYTESRSKAQDIILAGCVFVNGVKVTSKAHKIKDTDNIEVVQNI-KYVSRA 61

Query: 111 GFKLEAAIEQLGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDE 170
           G KLE A  + G+ V+ K+ LD G STGGFTDCLL+HGA  VY +DVG+ Q+  K+R D 
Sbjct: 62  GEKLEKAFVEFGISVENKICLDIGASTGGFTDCLLKHGAKKVYALDVGHNQLVYKLRNDN 121

Query: 171 RVCVMERTNLRYL---AGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQF 230
           RV  +E  N + +       +   ++  D+SFISI  + P +   +      VTL+KPQF
Sbjct: 122 RVVSIEDFNAKDINKEMFNDEIPSVIVSDVSFISITKIAPIIFKELNNLEFWVTLIKPQF 181

Query: 231 ECRRSQVGGKGIVRDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCF 286
           E  R  V   GI+RD  + +++L+  I  +   GF       SP+KGA+GN E+L  F
Sbjct: 182 EAERGDVSKGGIIRDDILREKILNNAISKIIDCGFKEVNRTISPIKGAKGNIEYLAHF 238

[Close]

BLAST of Cp4.1LG17g11370 vs. NCBI nr
Match: XP_023513431.1 (uncharacterized protein LOC111778052 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 580 bits (1494), Expect = 1.91e-208
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60
           MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120
           QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240

Query: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296
           RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD
Sbjct: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296

[Close]

BLAST of Cp4.1LG17g11370 vs. NCBI nr
Match: XP_022960528.1 (uncharacterized protein LOC111461240 isoform X1 [Cucurbita moschata])

HSP 1 Score: 570 bits (1470), Expect = 9.02e-205
Identity = 294/297 (98.99%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60
           MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAK GKIQSLNLKKKKRLDEMCVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKSGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120
           QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240

Query: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTT-LSAANQD 296
           RDPQVHQEVL+KIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTT LSAANQD
Sbjct: 241 RDPQVHQEVLEKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTTLSAANQD 297

[Close]

BLAST of Cp4.1LG17g11370 vs. NCBI nr
Match: XP_023004131.1 (uncharacterized protein LOC111497556 [Cucurbita maxima])

HSP 1 Score: 570 bits (1468), Expect = 1.75e-204
Identity = 290/296 (97.97%), Postives = 294/296 (99.32%), Query Frame = 0


Query: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60
           MSKCLLSRNNFARIFLVSPP CCRIHSASPKAFSVAK GKIQSLNLKKKKRLDEMCVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPNCCRIHSASPKAFSVAKSGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120
           QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240
           R+LAG+PQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKG+V
Sbjct: 181 RHLAGVPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGVV 240

Query: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296
           RDPQVHQEVL+KIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD
Sbjct: 241 RDPQVHQEVLEKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296

[Close]

BLAST of Cp4.1LG17g11370 vs. NCBI nr
Match: KAG7025446.1 (yqxC [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 568 bits (1464), Expect = 7.41e-204
Identity = 292/297 (98.32%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60
           MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFS AK GKIQSLNLKKKKRLDEMCVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSFAKSGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120
           QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKG+V
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGVV 240

Query: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTT-LSAANQD 296
           RDPQVHQEVL+KIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTT LSAANQD
Sbjct: 241 RDPQVHQEVLEKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTTLSAANQD 297

[Close]

BLAST of Cp4.1LG17g11370 vs. NCBI nr
Match: KAG6593038.1 (hypothetical protein SDJN03_12514, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 567 bits (1461), Expect = 2.12e-203
Identity = 291/297 (97.98%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60
           MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFS AK GKIQSLNLKKKKRLDEMCVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSFAKSGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120
           QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LGVDVDG+VALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGRVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKG+V
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGVV 240

Query: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTT-LSAANQD 296
           RDPQVHQEVL+KIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTT LSAANQD
Sbjct: 241 RDPQVHQEVLEKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTTLSAANQD 297

[Close]

BLAST of Cp4.1LG17g11370 vs. ExPASy TrEMBL
Match: A0A6J1H982 (uncharacterized protein LOC111461240 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461240 PE=4 SV=1)

HSP 1 Score: 570 bits (1470), Expect = 4.37e-205
Identity = 294/297 (98.99%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60
           MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAK GKIQSLNLKKKKRLDEMCVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKSGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120
           QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240

Query: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTT-LSAANQD 296
           RDPQVHQEVL+KIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTT LSAANQD
Sbjct: 241 RDPQVHQEVLEKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTTLSAANQD 297

[Close]

BLAST of Cp4.1LG17g11370 vs. ExPASy TrEMBL
Match: A0A6J1KR87 (uncharacterized protein LOC111497556 OS=Cucurbita maxima OX=3661 GN=LOC111497556 PE=4 SV=1)

HSP 1 Score: 570 bits (1468), Expect = 8.49e-205
Identity = 290/296 (97.97%), Postives = 294/296 (99.32%), Query Frame = 0


Query: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60
           MSKCLLSRNNFARIFLVSPP CCRIHSASPKAFSVAK GKIQSLNLKKKKRLDEMCVERY
Sbjct: 1   MSKCLLSRNNFARIFLVSPPNCCRIHSASPKAFSVAKSGKIQSLNLKKKKRLDEMCVERY 60

Query: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120
           QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ
Sbjct: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120

Query: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240
           R+LAG+PQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKG+V
Sbjct: 181 RHLAGVPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGVV 240

Query: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296
           RDPQVHQEVL+KIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD
Sbjct: 241 RDPQVHQEVLEKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296

[Close]

BLAST of Cp4.1LG17g11370 vs. ExPASy TrEMBL
Match: A0A5D3BCA3 (Putative rRNA methyltransferase YqxC isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00050 PE=4 SV=1)

HSP 1 Score: 525 bits (1352), Expect = 4.05e-187
Identity = 269/296 (90.88%), Postives = 281/296 (94.93%), Query Frame = 0


Query: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60
           MSKCLLSRNN ARI L SPP+   IHS SPKAFSVAK GKIQSL LKKK+RLDE+CVERY
Sbjct: 1   MSKCLLSRNNCARILLFSPPSTSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60

Query: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120
           QQ+SRT+IQSWILQGKVLVDGKV+SKAGTPV DKAKVEIIAEVPKYVCRAG KLEAAIEQ
Sbjct: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120

Query: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           L VDV+GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LDVDVNGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGG GIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGGGIV 240

Query: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296
           RDPQVHQEVL+KIIKGVE+FGFCSKGWIESPLKGAEGNTEFLVCF RTT+S +NQ+
Sbjct: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 296

[Close]

BLAST of Cp4.1LG17g11370 vs. ExPASy TrEMBL
Match: A0A1S3C7N4 (putative rRNA methyltransferase YqxC isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497628 PE=4 SV=1)

HSP 1 Score: 525 bits (1352), Expect = 4.05e-187
Identity = 269/296 (90.88%), Postives = 281/296 (94.93%), Query Frame = 0


Query: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60
           MSKCLLSRNN ARI L SPP+   IHS SPKAFSVAK GKIQSL LKKK+RLDE+CVERY
Sbjct: 1   MSKCLLSRNNCARILLFSPPSTSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60

Query: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120
           QQ+SRT+IQSWILQGKVLVDGKV+SKAGTPV DKAKVEIIAEVPKYVCRAG KLEAAIEQ
Sbjct: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120

Query: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           L VDV+GKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LDVDVNGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGG GIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGGGIV 240

Query: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296
           RDPQVHQEVL+KIIKGVE+FGFCSKGWIESPLKGAEGNTEFLVCF RTT+S +NQ+
Sbjct: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 296

[Close]

BLAST of Cp4.1LG17g11370 vs. ExPASy TrEMBL
Match: A0A0A0KA33 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G368230 PE=4 SV=1)

HSP 1 Score: 523 bits (1346), Expect = 3.33e-186
Identity = 268/296 (90.54%), Postives = 280/296 (94.59%), Query Frame = 0


Query: 1   MSKCLLSRNNFARIFLVSPPTCCRIHSASPKAFSVAKPGKIQSLNLKKKKRLDEMCVERY 60
           M KCLLSRNN ARIFL SP +   IHS SPKAFSVAK GKIQSL LKKK+RLDE+CVERY
Sbjct: 1   MFKCLLSRNNCARIFLFSPLSSSPIHSPSPKAFSVAKSGKIQSLTLKKKRRLDEVCVERY 60

Query: 61  QQYSRTIIQSWILQGKVLVDGKVVSKAGTPVGDKAKVEIIAEVPKYVCRAGFKLEAAIEQ 120
           QQ+SRT+IQSWILQGKVLVDGKV+SKAGTPV DKAKVEIIAEVPKYVCRAG KLEAAIEQ
Sbjct: 61  QQFSRTMIQSWILQGKVLVDGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQ 120

Query: 121 LGVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180
           L VDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL
Sbjct: 121 LDVDVDGKVALDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNL 180

Query: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVVNVMKETSTIVTLVKPQFECRRSQVGGKGIV 240
           RYLAGLPQKVDIVTLDLSFISILLVMPAV+NVMKETSTIVTLVKPQFECRRSQVGG GIV
Sbjct: 181 RYLAGLPQKVDIVTLDLSFISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIV 240

Query: 241 RDPQVHQEVLDKIIKGVESFGFCSKGWIESPLKGAEGNTEFLVCFTRTTLSAANQD 296
           RDPQVHQEVL+KIIKGVE+FGFCSKGWIESPLKGAEGNTEFLVCF RTT+S +NQ+
Sbjct: 241 RDPQVHQEVLEKIIKGVENFGFCSKGWIESPLKGAEGNTEFLVCFDRTTVSTSNQE 296

[Close]

BLAST of Cp4.1LG17g11370 vs. TAIR 10
Match: AT3G25470.1 (bacterial hemolysin-related )

HSP 1 Score: 365.2 bits (936), Expect = 5.1e-101
Identity = 184/260 (70.77%), Postives = 216/260 (83.08%), Query Frame = 0


Query: 31  KAFSVAKPGKIQSLNLKKKKRLDEMCVERYQQYSRTIIQSWILQGKVLVDGKVVSKAGTP 90
           + F+ A  GK       KK+RLDE CVER+ +YSRT+IQSWI+QGKVLVDG+ V KAG P
Sbjct: 42  RCFASATRGK------NKKQRLDEACVERFNEYSRTLIQSWIMQGKVLVDGRRVIKAGMP 101

Query: 91  VGDKAKVEIIAEVPKYVCRAGFKLEAAIEQLGVDVDGKVALDAGLSTGGFTDCLLQHGAS 150
           V   A ++I AEVPK+VCR G KLEAA+E+L VDV  KV LDAGLSTGGFTDCLL++GA+
Sbjct: 102 VSTTAAIKITAEVPKFVCRGGLKLEAALEKLDVDVSEKVVLDAGLSTGGFTDCLLRYGAA 161

Query: 151 FVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSFISILLVMPAVV 210
            VYGVDVGYGQVADKIR D++V V+ERTNLRYL GLPQKVD+VTLDLSFISIL VMPA++
Sbjct: 162 HVYGVDVGYGQVADKIRNDKKVTVIERTNLRYLPGLPQKVDVVTLDLSFISILKVMPAIM 221

Query: 211 NVMKETSTIVTLVKPQFECRRSQVGGKGIVRDPQVHQEVLDKIIKGVESFGFCSKGWIES 270
           NVMKE +T+VTLVKPQFE RR QVG  GIVRDP+VHQEVL+KII GVE +GF +KG+IES
Sbjct: 222 NVMKEDATLVTLVKPQFEARRQQVGKGGIVRDPEVHQEVLEKIINGVERYGFTNKGFIES 281

Query: 271 PLKGAEGNTEFLVCFTRTTL 291
           P+KGA+GN EFL CF R T+
Sbjct: 282 PIKGADGNIEFLACFNRGTV 295

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g11370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19672	2.3e-45	43.39	Putative rRNA methyltransferase YqxC OS=Bacillus subtilis (strain 168) OX=224308...	[more]
P9WJ62	7.1e-39	40.25	16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA OS=Mycobacterium tuberculosi...	[more]
P9WJ63	7.1e-39	40.25	16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA OS=Mycobacterium tuberculosi...	[more]
Q06803	2.7e-38	39.08	Hemolysin A OS=Brachyspira hyodysenteriae OX=159 GN=tlyA PE=2 SV=1	[more]

BLAST of Cp4.1LG17g11370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513431.1	1.91e-208	100.00	uncharacterized protein LOC111778052 [Cucurbita pepo subsp. pepo]	[more]
XP_022960528.1	9.02e-205	98.99	uncharacterized protein LOC111461240 isoform X1 [Cucurbita moschata]	[more]
XP_023004131.1	1.75e-204	97.97	uncharacterized protein LOC111497556 [Cucurbita maxima]	[more]
KAG7025446.1	7.41e-204	98.32	yqxC [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6593038.1	2.12e-203	97.98	hypothetical protein SDJN03_12514, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG17g11370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H982	4.37e-205	98.99	uncharacterized protein LOC111461240 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KR87	8.49e-205	97.97	uncharacterized protein LOC111497556 OS=Cucurbita maxima OX=3661 GN=LOC111497556...	[more]
A0A5D3BCA3	4.05e-187	90.88	Putative rRNA methyltransferase YqxC isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C7N4	4.05e-187	90.88	putative rRNA methyltransferase YqxC isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KA33	3.33e-186	90.54	S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G368...	[more]

BLAST of Cp4.1LG17g11370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25470.1	5.1e-101	70.77	bacterial hemolysin-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 50..115 e-value: 7.1E-9 score: 45.5
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 51..93 e-value: 9.4E-9 score: 34.9
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 50..99 e-value: 8.58678E-8 score: 46.4738
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 45..105 e-value: 1.1E-15 score: 58.8
IPR004538	Haemolysin A /rRNA methyltransferase TlyA	PIRSF	PIRSF005578	TlyA	coord: 45..296 e-value: 9.2E-100 score: 330.8
IPR004538	Haemolysin A /rRNA methyltransferase TlyA	TIGRFAM	TIGR00478	TIGR00478	coord: 51..280 e-value: 6.6E-68 score: 226.4
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 109..296 e-value: 2.4E-73 score: 247.8
None	No IPR available	PANTHER	PTHR32319	BACTERIAL HEMOLYSIN-LIKE PROTEIN	coord: 47..291
None	No IPR available	PROSITE	PS50889	S4	coord: 50..110 score: 12.583499
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 50..230
IPR002877	Ribosomal RNA methyltransferase FtsJ domain	PFAM	PF01728	FtsJ	coord: 106..285 e-value: 3.3E-19 score: 69.7
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 106..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g11370.1	Cp4.1LG17g11370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003723	RNA binding