Cp4.1LG17g10670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g10670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG17: 8138948 .. 8142253 (+)
RNA-Seq Expression	Cp4.1LG17g10670
Synteny	Cp4.1LG17g10670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATAAGGTCCCATATGATCCGGACGCCTCTAAGTCCCGCTTGACCTGCTCTCCACCGTCTAATCCACGCGTTGTTCTTCTCTGAATTTTCCATTTTTGGCTTCCTCGATTCTCGGTGCGGATAATTTTCCTTTTTCTTTTAGTTTCCTTTCTTTCCATCCAAACAGACTTTAATCCGAGAAAATCCATTAACTGGACTCGGATTCCTTTCGCCGCACCATCTCACAGCCTACTTCTCTCTCTAATTTACTCCCATTTTCCGTTTCCCAGCTCGTTAATCCAACCTTCTCTTTGCACTCTCTTCTGATCAAAGCCGCTATGATTTTCACCACCAAAACCGTTCTGGGATTTCGTTGATTTGATTGGTTCATCGTTTATGGTTAGCCAATCGTCTCGGCTTTAGCGATCTCCGGAGATCGTTTGATTTTGCGCTCTTTGTTGGGGTTTTCTTCTTGTTGTTCTTGTTTCTAGGTGAAGGATAGTGATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGCCTTTTTCCGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCGGCTGGATTTGCGTCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATTTTCTATGTGGTTGGGATCGTTTCTAGCCTCTCGATGTTGGGACGCTCTATGCTTTGTTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGGTGAATTTCTCATCTGCCTCTGTTTCCTTCTTCTATTGGATTTTATTTTTGTTTCATTTCCTTATCTAAATTTTCTTGCTGGATGTTTGTTATCATCAATACTTGCATATTATCTTTATCTCTGAATTCTCTTATGGCTTCTGCTTGTGAAATATTTGTTGTATCTTGTTCATTGCCTTGCCAACTATCTTGTCAATAATTGATGTTTACTTCGTTTCTTGGATTGATATTGGTGCGATCTAACTCAGATCTAACTCTCATTATTAAAGATAAATCCTGAACCTCACGGATCTTGCCCTTTTCTGACATAAGAGTATTGGATTTCACTAAGTCCATTCGTGGGAAATTTTGAACTAGACCATTTGTACTTAGTTCAAAGGGAGCGTAGGCTTCTTCGATAGAAGAGCTTTTTTTGTCTCGGTCCCAATTCAACAATAAACAAGTCCGAACTAATTGAATTCAATTTTCTCTTAGGCTTGTTAGATTTGGTAGGTGTGGCTGTGTGGTAAGGGCTTGAGATGGGGATACCCTCTTAAGATCTGTGGGTTCAAGTTGTTGGAAATATGATAGCACTTTGGAATTTTATGTGAATTAATGAGGTGGGCCGTGAGAATAATTCACAGAATGGGTCTAGATGACCTCGATATTCAATAACTTGTGAACTTTCCTTCCAATAAATTGATGTTTACTTCACCTTCTTGATTTTGCTCTGTGATTTTTCTTAATGAATGCACACGCATATCTAAATCTGAAAGGGAAATTTAGCTGGGCTAGTTCTTTATCAAGTGTAAGAGTGAGAAATATTGCCCATATGTTGGCATTTATTTTCTCGTGCTTCCATCGATGCATTTGAATTCCTTGCAGTCGCCTAGTACGAGCATGCTTGAATGTTTAGGTCAGGTTTTTGGGGGTATTTTTTTGTAAGCATAAAGTGAATTGTGCCTCTGCTTGTGTCCAAAGATTGATGTTTGAAGTTGGTAAAGCAATTTTTTGCGATATCGACGAATTTGATTGTTTTGTGGGCTTGTGTGATCGGTGCTTGTTCTCAACGAAGGCTCGGTTTCTTGTAAATGCGTATGTTCGTGTGACCGGTGCTTAGAATATTGTAGGTTATTGAGTTTGTTTCTTTGTTATTATTGTTGCTGCAGCTTGGAAACAAATGTAAATATGAAGAAACCTTGGTTCAACCAGCAGATAGTTGACTTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGGTGCCCTTGTGAATGAATGGTGCTGCCTCTAGAAACATATAGGCAAGATGAAGTTTGAATTATTTACCACCGTTTGTTGTTTTTTGAGGTTGTGGAGTGACATTGTGTTGTGTATCTTCCTGCTTTTAAGACTTTTTGAGTCCATATGTGTAACTGCCACTGTTTGAAATGCCTGTTAGGCTATAAAACAAAAAGAAATAAAAAATGTCGTAACAATTGTGAAGGTTCATTTTCATGGTGTCCGAGGTTTTGTGATGTCCCATGTTGGTTGGGGAGGAGGAGACCAAAACACCCTTTATAAGTGTGTGGAAACCTTCCCCTAGCAGTCCGTTTTAAAGCTTTGAGGGGAAGCCCGAAAAGGAAAGTCCAAGTAAGACAATATCTGCTAGCGTTGGATTTGGGCCGTTACAGGTTTTGTTTCGAAATCTTGGGCTAGACACTTAGGTATCAGTCTAAATCTACCGCTAGCATCTCCTCTTTGAACTTTCCCTTTCGGGCTTCTTCTCAAGGTTTTCAAAATGGGTTTATTAGGAAGAGGTTTCCACATTCTTATAAAAAATGTTTCGTTCCCCTCTCCAACCGATGTGAGATATCACAATCATTGTTTGGCTTTGCTGGTACTCGTTCCCTTTCTGGTTGATGTGAGATCTCACACTTTTAGAGCTATTTGTTTGTGTAACATCTAACCCCAAGTGCACTAAAATTGTTCAACTTTATGTTCTTTTAGATTAACCATATTCATTCAAGTGGGTTTTGTTAAATGGGTCGAAGGATAAAGTTCAAATCTTATAGAAAAACGTCCATAGCCAAGACAAAGCCTTAAGATAGCACAACTTCGAAATGATGAAGCAAACTATATGTTAGATAACTCAATAATTTTGCTCACGTACTTGAAAACTTGGGACATGGACCGAATATTTAGAACAAACTAATCAAAACGAAGTTGAAGTGACTTTGCATTTGGTGGAAGAATTAGAAACGAACAAACGTAGAGGTGAGGTGAAGCTCGATTAACCAATGTAGAGATGAACCTTGATGGCGAGCAAGAAGACGCAAATGAGACCGAAGTAGAGAAGCGAATGAACGACGATAGCAGCAGCGCTGGTGTGAAAGTTGCCGAACTCCAAGCACCTTCGGTTTCCAGGAAGCTGGAAGAGCAGCCCTGGTGTTAG

mRNA sequence

TGGATAAGGTCCCATATGATCCGGACGCCTCTAAGTCCCGCTTGACCTGCTCTCCACCGTCTAATCCACGCGTTGTTCTTCTCTGAATTTTCCATTTTTGGCTTCCTCGATTCTCGGTGCGGATAATTTTCCTTTTTCTTTTAGTTTCCTTTCTTTCCATCCAAACAGACTTTAATCCGAGAAAATCCATTAACTGGACTCGGATTCCTTTCGCCGCACCATCTCACAGCCTACTTCTCTCTCTAATTTACTCCCATTTTCCGTTTCCCAGCTCGTTAATCCAACCTTCTCTTTGCACTCTCTTCTGATCAAAGCCGCTATGATTTTCACCACCAAAACCGTTCTGGGATTTCGTTGATTTGATTGGTTCATCGTTTATGGTTAGCCAATCGTCTCGGCTTTAGCGATCTCCGGAGATCGTTTGATTTTGCGCTCTTTGTTGGGGTTTTCTTCTTGTTGTTCTTGTTTCTAGGTGAAGGATAGTGATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGCCTTTTTCCGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCGGCTGGATTTGCGTCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATTTTCTATGTGGTTGGGATCGTTTCTAGCCTCTCGATGTTGGGACGCTCTATGCTTTGTTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGTTGGTAAAGCAATTTTTTGCGATATCGACGAATTTGATTGTTTTGTGGGCTTGTGTGATCGGTGCTTGTTCTCAACGAAGGCTCGGTTTCTTGTAAATGCCTTGGAAACAAATGTAAATATGAAGAAACCTTGGTTCAACCAGCAGATAGTTGACTTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGAGATGAACCTTGATGGCGAGCAAGAAGACGCAAATGAGACCGAAGTAGAGAAGCGAATGAACGACGATAGCAGCAGCGCTGGTGTGAAAGTTGCCGAACTCCAAGCACCTTCGGTTTCCAGGAAGCTGGAAGAGCAGCCCTGGTGTTAG

Coding sequence (CDS)

ATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGCCTTTTTCCGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCGGCTGGATTTGCGTCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATTTTCTATGTGGTTGGGATCGTTTCTAGCCTCTCGATGTTGGGACGCTCTATGCTTTGTTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGTTGGTAAAGCAATTTTTTGCGATATCGACGAATTTGATTGTTTTGTGGGCTTGTGTGATCGGTGCTTGTTCTCAACGAAGGCTCGGTTTCTTGTAAATGCCTTGGAAACAAATGTAAATATGAAGAAACCTTGGTTCAACCAGCAGATAGTTGACTTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGAGATGAACCTTGATGGCGAGCAAGAAGACGCAAATGAGACCGAAGTAGAGAAGCGAATGAACGACGATAGCAGCAGCGCTGGTGTGAAAGTTGCCGAACTCCAAGCACCTTCGGTTTCCAGGAAGCTGGAAGAGCAGCCCTGGTGTTAG

Protein sequence

MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCLTAPMPRKDFNVGKAIFCDIDEFDCFVGLCDRCLFSTKARFLVNALETNVNMKKPWFNQQIVDLFARGWSARGLQEKPSKEMNLDGEQEDANETEVEKRMNDDSSSAGVKVAELQAPSVSRKLEEQPWC

Homology

[Close]

BLAST of Cp4.1LG17g10670 vs. NCBI nr
Match: KAG7025375.1 (hypothetical protein SDJN02_11870 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300 bits (767), Expect = 3.92e-100
Identity = 166/200 (83.00%), Postives = 172/200 (86.00%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60
           MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQM
Sbjct: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC
Sbjct: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120

Query: 121 LTAPMPRKDFNVGKAIFCDIDEFDCFVGLCDRCLFSTKARFLVNALETNVNMKKPWFNQQ 180
           LTAPMPRKDFNV KAIFC IDEFDCF+G         K ++    ++ N          Q
Sbjct: 121 LTAPMPRKDFNVAKAIFCGIDEFDCFLG--------NKCKYEETLVQPN----------Q 180

Query: 181 IVDLFARGWSARGLQEKPSK 200
           IV+LFARGWSARGLQEKPSK
Sbjct: 181 IVELFARGWSARGLQEKPSK 182

[Close]

BLAST of Cp4.1LG17g10670 vs. NCBI nr
Match: XP_023515244.1 (uncharacterized protein LOC111779335 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243 bits (620), Expect = 1.32e-78
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60
           MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM
Sbjct: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC
Sbjct: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120

Query: 121 LTAPMPRKDFNVGK 134
           LTAPMPRKDFN  K
Sbjct: 121 LTAPMPRKDFNAWK 134

[Close]

BLAST of Cp4.1LG17g10670 vs. NCBI nr
Match: XP_022960441.1 (uncharacterized protein LOC111461173 [Cucurbita moschata])

HSP 1 Score: 240 bits (612), Expect = 2.17e-77
Identity = 131/134 (97.76%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60
           MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQM
Sbjct: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC
Sbjct: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120

Query: 121 LTAPMPRKDFNVGK 134
           LTAPMPRKDFN  K
Sbjct: 121 LTAPMPRKDFNAWK 134

[Close]

BLAST of Cp4.1LG17g10670 vs. NCBI nr
Match: XP_023004228.1 (uncharacterized protein LOC111497622 [Cucurbita maxima])

HSP 1 Score: 238 bits (606), Expect = 1.77e-76
Identity = 129/134 (96.27%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60
           MMSR QEDPQSGV +LHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM
Sbjct: 1   MMSRPQEDPQSGVEILHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC
Sbjct: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120

Query: 121 LTAPMPRKDFNVGK 134
           LTAPMPRKDFN  K
Sbjct: 121 LTAPMPRKDFNAWK 134

[Close]

BLAST of Cp4.1LG17g10670 vs. NCBI nr
Match: KAG6592964.1 (hypothetical protein SDJN03_12440, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 225 bits (574), Expect = 1.83e-69
Identity = 159/293 (54.27%), Postives = 166/293 (56.66%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60
           MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQM
Sbjct: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           TSAGFASLLLGISLALMLCGS                      VG + +L +  RS    
Sbjct: 61  TSAGFASLLLGISLALMLCGSPLD-------------------VGTLYAL-LFNRS---- 120

Query: 121 LTAPMPRKDFNVGKAIFCDIDEFDCFVGLCDRCLFSTKARFLVNALETNVNMKKPWFN-Q 180
             AP                + F C                    LETNVNMKKPW    
Sbjct: 121 -NAP----------------ERFQC--------------------LETNVNMKKPWVQPN 180

Query: 181 QIVDLFARGWSARGLQEKPSK--------------------------------------- 240
           QIV+LFARGWSARGLQEKPSK                                       
Sbjct: 181 QIVELFARGWSARGLQEKPSKGALVNEWTSTEYLEQTNQNKVEVTMHLVEELETNKRRGE 232

Query: 241 ------EMNLDGEQEDANETEVEKRMNDDSSSAGVKVAELQAPSVSRKLEEQP 247
                 EMNLDGEQEDANETEVEKRMNDDSSSAGVKVAELQAPS+    +  P
Sbjct: 241 ARLTNVEMNLDGEQEDANETEVEKRMNDDSSSAGVKVAELQAPSIPGSWKSSP 232

[Close]

BLAST of Cp4.1LG17g10670 vs. ExPASy TrEMBL
Match: A0A6J1H7L5 (uncharacterized protein LOC111461173 OS=Cucurbita moschata OX=3662 GN=LOC111461173 PE=4 SV=1)

HSP 1 Score: 240 bits (612), Expect = 1.05e-77
Identity = 131/134 (97.76%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60
           MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQM
Sbjct: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC
Sbjct: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120

Query: 121 LTAPMPRKDFNVGK 134
           LTAPMPRKDFN  K
Sbjct: 121 LTAPMPRKDFNAWK 134

[Close]

BLAST of Cp4.1LG17g10670 vs. ExPASy TrEMBL
Match: A0A6J1KYV0 (uncharacterized protein LOC111497622 OS=Cucurbita maxima OX=3661 GN=LOC111497622 PE=4 SV=1)

HSP 1 Score: 238 bits (606), Expect = 8.59e-77
Identity = 129/134 (96.27%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60
           MMSR QEDPQSGV +LHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM
Sbjct: 1   MMSRPQEDPQSGVEILHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC
Sbjct: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120

Query: 121 LTAPMPRKDFNVGK 134
           LTAPMPRKDFN  K
Sbjct: 121 LTAPMPRKDFNAWK 134

[Close]

BLAST of Cp4.1LG17g10670 vs. ExPASy TrEMBL
Match: A0A1S3CB48 (uncharacterized protein LOC103498845 OS=Cucumis melo OX=3656 GN=LOC103498845 PE=4 SV=1)

HSP 1 Score: 204 bits (520), Expect = 8.90e-64
Identity = 111/133 (83.46%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMT 61
           M+ +Q+DP+SGV   HE+SSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMT
Sbjct: 1   MNMAQQDPRSGV--FHEISSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMT 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIFYVVGIVSSLS+LGRS++CC 
Sbjct: 61  PAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSVLGRSLICCF 120

Query: 122 TAPMPRKDFNVGK 134
           TAP PRKDF+  K
Sbjct: 121 TAPTPRKDFHGWK 131

[Close]

BLAST of Cp4.1LG17g10670 vs. ExPASy TrEMBL
Match: A0A0A0KDL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095290 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 2.38e-61
Identity = 108/133 (81.20%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMT 61
           M  +++DP+SGV   +E+SSLLLKILRSPPPPVPFSDHVLELSS I+SSSSRILPSSQMT
Sbjct: 1   MIMARQDPRSGV--FYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMT 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIFYVVGIVSSLSMLGRS++CC 
Sbjct: 61  PAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCF 120

Query: 122 TAPMPRKDFNVGK 134
           TAP PRKDF+  K
Sbjct: 121 TAPTPRKDFHGWK 131

[Close]

BLAST of Cp4.1LG17g10670 vs. ExPASy TrEMBL
Match: A0A6J1DRN9 (uncharacterized protein LOC111022584 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111022584 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 3.37e-61
Identity = 111/134 (82.84%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60
           MM R +EDPQS V  LHE+SSLL+KILRSPPPPVPFSDHVLELSSVISSSS  +LPSSQ+
Sbjct: 1   MMRRPREDPQSRV--LHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSG-LLPSSQI 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           T AG ASLLLGISLALMLCGSVTFFLGF+LMPWILV  MIFYVVGIVSSLSMLGRS+LCC
Sbjct: 61  TPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVVGIVSSLSMLGRSILCC 120

Query: 121 LTAPMPRKDFNVGK 134
            +AP PRKDFN  K
Sbjct: 121 FSAPTPRKDFNAWK 131

[Close]

BLAST of Cp4.1LG17g10670 vs. TAIR 10
Match: AT1G27290.1 (unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 6.6e-25
Identity = 71/135 (52.59%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLE--------LSSVISSSSS 60
           MM R +++ QS   V +++SSL+L +LRSPP P+   DH  +         SS   SSSS
Sbjct: 1   MMRRQRDEQQS--RVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSS 60

Query: 61  RILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSM 120
             L  + ++ +GFASLLLGIS+ALMLCGSVTFF+GF+LMPW+L   ++FYV GIVS++SM
Sbjct: 61  PSL--AHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISM 120

Query: 121 LGRSMLC-CLTAPMP 127
           +GRS+LC  LT P P
Sbjct: 121 VGRSILCYVLTPPSP 131

[Close]

BLAST of Cp4.1LG17g10670 vs. TAIR 10
Match: AT1G27290.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 6.6e-25
Identity = 71/135 (52.59%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLE--------LSSVISSSSS 60
           MM R +++ QS   V +++SSL+L +LRSPP P+   DH  +         SS   SSSS
Sbjct: 1   MMRRQRDEQQS--RVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSS 60

Query: 61  RILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSM 120
             L  + ++ +GFASLLLGIS+ALMLCGSVTFF+GF+LMPW+L   ++FYV GIVS++SM
Sbjct: 61  PSL--AHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISM 120

Query: 121 LGRSMLC-CLTAPMP 127
           +GRS+LC  LT P P
Sbjct: 121 VGRSILCYVLTPPSP 131

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g10670 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g10670 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025375.1	3.92e-100	83.00	hypothetical protein SDJN02_11870 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023515244.1	1.32e-78	98.51	uncharacterized protein LOC111779335 [Cucurbita pepo subsp. pepo]	[more]
XP_022960441.1	2.17e-77	97.76	uncharacterized protein LOC111461173 [Cucurbita moschata]	[more]
XP_023004228.1	1.77e-76	96.27	uncharacterized protein LOC111497622 [Cucurbita maxima]	[more]
KAG6592964.1	1.83e-69	54.27	hypothetical protein SDJN03_12440, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG17g10670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7L5	1.05e-77	97.76	uncharacterized protein LOC111461173 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1KYV0	8.59e-77	96.27	uncharacterized protein LOC111497622 OS=Cucurbita maxima OX=3661 GN=LOC111497622...	[more]
A0A1S3CB48	8.90e-64	83.46	uncharacterized protein LOC103498845 OS=Cucumis melo OX=3656 GN=LOC103498845 PE=...	[more]
A0A0A0KDL5	2.38e-61	81.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095290 PE=4 SV=1	[more]
A0A6J1DRN9	3.37e-61	82.84	uncharacterized protein LOC111022584 isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Cp4.1LG17g10670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27290.1	6.6e-25	52.59	unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bac...	[more]
AT1G27290.2	6.6e-25	52.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..249
None	No IPR available	PANTHER	PTHR34781	TRANSMEMBRANE PROTEIN	coord: 2..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g10670.1	Cp4.1LG17g10670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane