Cp4.1LG17g10640 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g10640
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	MADS-box protein 5
Location	Cp4.1LG17: 8101437 .. 8105557 (+)
RNA-Seq Expression	Cp4.1LG17g10640
Synteny	Cp4.1LG17g10640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCCAAGGCAGCAGAAAAAAGAAAGAAAAAAAGAAAAGGAAAATGGTGTAGGTTCATAGTTAGTGAGGAGGGAGAGGGTATGAGGAGGGGATTGGTGAAATAAGCGAAGAATATAAATGGTGACGCACAAAGGTTAAGAGGGGGGGGGGAAAGAGAGAAGTGAAACAAAAAGAGCAAAGAAATTTGATATTTGATTTAGTTTTTGGCATTTCCTTTTCCGTTTGATTTTCGTTTTGATTTTCCGGGAAAATTTGGGATCAAATCTGTTTGGTTAGAGAGAAAAAGGAAAAAAAAGGAAGAACAAAATGGGAAGAGGAAGAGTAGAACTGAAGCGGATAGAGAACAAGATCAACCGGCAAGTGACCTTCGCGAAACGAAGAAATGGTCTGTTGAAGAAAGCTTATGAGCTCTCCGTGCTTTGCGATGCCGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAACTGTACGAGTTTTGCAGCAGTTCAAGGTATCATCATCATCATCATCATCAACAACATCAACAACAACAACAACTGTTGTATTGATCACTAATTTTTTTTATTTTAATCCCGTTTTTGCCATTCTTTCTTTTTAGGTTTTCTGTTTCTTCCCTTTCTTTTTTCCCCTTTCCATGCTAAGAATAAAAGAAAGAGAGAGAATATTTTCAAAAAAAAATTACATATATATATATATATACATAAACGAATGAATCCTTTCCTTTTCGCTTCTCTGTGTTTTCTTCCGTCGTTTCATCCATGGCGTCTCAGAAATTAGGGTTTTCTTCTTCTTCGTCTTCTTCTTCCTCCATGCCGCCATGGATCGATCCATCGATTTAGGGTTTCTTCTTCTTCTTCTCCTCATTTAGGGTTTCCTTACTGTTTTCTTCATGGATCTTTGTTTCTTTTACCGATTAAGAGTTGTAGTTTGTGTTTTCCAAGGGTTTTGATCCGAAATGAGATTTGATTTCTGAGGATTTGTGTTTGTTTTCATGTAAATTTCAAACTAGTAATGGATTTTTTTAATTTGTTCTTACTATTTTGTGTTTGATTATTACTATAATAATTTCAGGCTTCAGGATTCTTCAAAAATTTAAGAAATAGGTTAATTATTGTGTACTTCAAGGTCAATAATTCATGTATTTGTTGATTACTGGGATTTGACATTTAATGATTTTCAAGATCTCTCAAATGTTATTGGGTTTCCTTAATTGTTTTTAACATTTTAAATCAATTTATAATTGAGGGATTTATTTATTTATTTATTTTGGTATTATTATGTGTGAAATCTAGCATGCTGAAAACTCTTGAGAGATACCAGAAATGCAACTATGGAGCGCCAGAGCCAAATGTATCCACAAGAGAAGCCTTGGTAATCACTTTTCTATTATTTATTTTTTAAATTAAGTAGGTTAATTAATTAATCTTTTTTCTTTTTCTTTTTTTTAAATAAAAGATGTTATTATTATTATTATTTGATGATATAAAATGATAGGATGGGTTAATTATAGGAACTGAGCAGCCAGCAGGAATATTTGAAGCTTAAAGCTCGCTATGAAGCTCTGCAACGATCCCAGAGGTAATAACCCCAACATTTTAGATACCTTTACTTTCCATTTTTGTAGAATATTGATTTCTGATCTAAAGTTTTAGATTCAAGGCTAATTTAGTGCGTGTCTGATCAAAATGTTCTCGATTCATATTGTTTTTCATTTGTTAGGAGTAAAGGGTGTTCATATGACTCGATAACTCGTCCAATTCAGACTACTGATCCCAAACCATAAACGTTCTGTTGAGTTGGATTAGGTTAGATTTTTTTCGGTTTGAGTTAGGTTGAATTTTTTGGAAAATAAAAAAATGCGGGTCAATTCGTTTGTTAATATTTTTTTTGTTGGGTCAACACGACCAACTCGAAAATAGGGTTCCAACTTAACTCAATCGTGTCCTGCTTAGAAGATTGTTATGAAAATTAAAAATATTTTACGTTTGTAACTGATGTTAATGTTGTGTTGTGCCTGTTCAAAATTTTAGTTATTAATGTAACGGAGAGGTAGGATTTTTTAAAATAATCATAAAAAAAACACCTGACAATCGAACCCAACCTGAAAATATAAGGTTAGGTTGGGTTGGATTGTAAATTCTTTTTTAGTTACTTGGGTCACCCATCTAATAAACTCGAAAATTTTGAGTTAGACCAAAAGATTTTTCCAACTCAACTTGACTCATTTAAACCTCTAATGGAAGGCTCTACCATGGTTGTGAAAGAAAATTTGAAGTAATGATATGAGATTACATGTACAATAACTTATCGATTTACATTAAAGTTTAAATAGACACATAATGAGATTAATCGAGTCGTGTTTAGTTGGTTCGGAGATGCTCGGTTATTTAGTAATTATGTTTTCTTTTTTTGTGATAATTTTGAATATAAGCAGGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCTCTTGAAAGGCAGCTTGATATGTCACTTAAGCAGATCAGATCAACAAGGGTAGTTCTTCAACTTCTCCATTGCCTTTAATAAAACCATCCAAAATTATAATCTTTCTCATTCAATCCTTTTCTAATCTTTTGCAGACTCAGTACATGCTAGATCAGCTCACTGATCTTCAACGTAAGGTATGAGGACACGAACACATATACGACACGATATGAACACTATAATTATATGGTTATAAAAATGAGTTTGATATGTTTCGATCTAAAAAGTAACGAGTATTCAATCTTGTTTTTGTTTGAACAAACTTTCAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGGTATAAAAACGTATCTGTTGATAATATATATATTTTTTAACAAAAAGTTAGAAAATTTTGTAATTGGTGTAAATTTGTGGATTACAGTTGATTGAAGGGTATCAAGTAAATGCCCTCCAATTGAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTAAATATTCTTCTATTCTTTCCAAAATCTTTTATTCTTACGTTTTTTTAACGTCTTGGCGCTATTAGGCCACGTTCGGCCCGTAGTTTTTGAATTTGTATAGTTGGTACCGAGTCTAAATTTATTGAATTTGTAGGGTTTGTATACGTAGTTTACGCTAGCTGAGTTATGCTGAGAATTTGAACTTTTGATCTCTAGATCGAAAATACATAGTTTATGCTAATTGAGCTACGTTCATTTCGTGTATTACGATTAGCATGATTTATGATTAGCTATGCTGAGGATTTGAACTTTTGACCTCTTGATCGAGAATACATAGTTTATGCTAGTGAGCTATAGTGAGGGTTGAACTTTTGACCTCTTGATCGAGAATACATATTTATGCTAGTTGAGCTATGCGGATGATTTAAACTTTTGACTTCTTGATCGATAACACATAGTTTATACTAGTTGAGCTACATTAATTTCGTATATTATAATTAGCATGATTTATGCTAGTTCTAGACCTACCTAGAATCATAACACCCGATTCAAACTAGGTTGGGGGTGAGAATTTTGTAAGATTAATGTGAAATTGAAGAAGAAATTTATAAGAAACTAAAGAATGAAGATGATTAATTTGCAGGTATCAGCCAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAATAATTTCCTCCCAGGATGGTTGCCTTGAGAAACAACAAGGAGATGGAAATTTTTCCGTTCAAAAATTGGAGAAAGAAAAGGGCAGTCATTTTCTTTGCTTCTGTTGCTTACCTCTAAACCCCCTCCTCCCAAAAAAGAAAAAAAAAAAAAAAAAAAAAAANAAAATCAATTTTCATGCTTGGAACTTATATATATATAATTAATACAAACTCTGCACTTAGTCTTTGTAAGCTAATTATGTGTATGCTATGACTTTGCTTTTTGAACAACAATTGTAATTTCATTATTTTTCTTCCTTTTTCATAAAGTTGTAAGTTTGTGTGTATTTTTATATTTTTTTTTTCATTTTTTTTTTGGAATATTTCTTATATTAGGACTGAAAGATTA

mRNA sequence

TACCCAAGGCAGCAGAAAAAAGAAAGAAAAAAAGAAAAGGAAAATGGTGTAGGTTCATAGTTAGTGAGGAGGGAGAGGGTATGAGGAGGGGATTGGTGAAATAAGCGAAGAATATAAATGGTGACGCACAAAGGTTAAGAGGGGGGGGGGAAAGAGAGAAGTGAAACAAAAAGAGCAAAGAAATTTGATATTTGATTTAGTTTTTGGCATTTCCTTTTCCGTTTGATTTTCGTTTTGATTTTCCGGGAAAATTTGGGATCAAATCTGTTTGGTTAGAGAGAAAAAGGAAAAAAAAGGAAGAACAAAATGGGAAGAGGAAGAGTAGAACTGAAGCGGATAGAGAACAAGATCAACCGGCAAGTGACCTTCGCGAAACGAAGAAATGGTCTGTTGAAGAAAGCTTATGAGCTCTCCGTGCTTTGCGATGCCGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAACTGTACGAGTTTTGCAGCAGTTCAAGCATGCTGAAAACTCTTGAGAGATACCAGAAATGCAACTATGGAGCGCCAGAGCCAAATGTATCCACAAGAGAAGCCTTGGAACTGAGCAGCCAGCAGGAATATTTGAAGCTTAAAGCTCGCTATGAAGCTCTGCAACGATCCCAGAGGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCTCTTGAAAGGCAGCTTGATATGTCACTTAAGCAGATCAGATCAACAAGGACTCAGTACATGCTAGATCAGCTCACTGATCTTCAACGTAAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGTTGATTGAAGGGTATCAAGTAAATGCCCTCCAATTGAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTATCAGCCAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAATAATTTCCTCCCAGGATGGTTGCCTTGAGAAACAACAAGGAGATGGAAATTTTTCCGTTCAAAAATTGGAGAAAGAAAAGGGCAGTCATTTTCTTTGCTTCTGTTGCTTACCTCTAAACCCCCTCCTCCCAAAAAAGAAAAAAAAAAAAAAAAAAAAAAANAAAATCAATTTTCATGCTTGGAACTTATATATATATAATTAATACAAACTCTGCACTTAGTCTTTGTAAGCTAATTATGTGTATGCTATGACTTTGCTTTTTGAACAACAATTGTAATTTCATTATTTTTCTTCCTTTTTCATAAAGTTGTAAGTTTGTGTGTATTTTTATATTTTTTTTTTCATTTTTTTTTTGGAATATTTCTTATATTAGGACTGAAAGATTA

Coding sequence (CDS)

ATGGGAAGAGGAAGAGTAGAACTGAAGCGGATAGAGAACAAGATCAACCGGCAAGTGACCTTCGCGAAACGAAGAAATGGTCTGTTGAAGAAAGCTTATGAGCTCTCCGTGCTTTGCGATGCCGAGGTTGCTCTCATCATCTTCTCCAATAGAGGAAAACTGTACGAGTTTTGCAGCAGTTCAAGCATGCTGAAAACTCTTGAGAGATACCAGAAATGCAACTATGGAGCGCCAGAGCCAAATGTATCCACAAGAGAAGCCTTGGAACTGAGCAGCCAGCAGGAATATTTGAAGCTTAAAGCTCGCTATGAAGCTCTGCAACGATCCCAGAGGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCTCTTGAAAGGCAGCTTGATATGTCACTTAAGCAGATCAGATCAACAAGGACTCAGTACATGCTAGATCAGCTCACTGATCTTCAACGTAAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGTTGATTGAAGGGTATCAAGTAAATGCCCTCCAATTGAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTATCAGCCAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAATAATTTCCTCCCAGGATGGTTGCCTTGA

Protein sequence

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

Homology

[Close]

BLAST of Cp4.1LG17g10640 vs. ExPASy Swiss-Prot
Match: Q8LLR0 (Agamous-like MADS-box protein MADS4 OS=Vitis vinifera OX=29760 GN=MADS4 PE=2 SV=2)

HSP 1 Score: 433.0 bits (1112), Expect = 2.3e-120
Identity = 220/242 (90.91%), Postives = 230/242 (95.04%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPE NVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LS+KELESLERQLD+SLKQIRSTRTQYMLDQLTDLQRKEH+LNEANKTLKQRL+EG QVN
Sbjct: 121 LSTKELESLERQLDVSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRLLEGTQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
            LQ N +A D+ YGRQQAQP  D FFHPL+CEPTLQIGYQPDPITV  AGPS+NN++PGW
Sbjct: 181 QLQWNPNAQDVGYGRQQAQPQGDGFFHPLECEPTLQIGYQPDPITVAAAGPSVNNYMPGW 240

Query: 241 LP 243
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. ExPASy Swiss-Prot
Match: Q03489 (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida OX=4102 GN=FBP2 PE=1 SV=2)

HSP 1 Score: 401.7 bits (1031), Expect = 5.7e-111
Identity = 209/242 (86.36%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPE N+STREALE+SSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           L+SKELESLERQLDMSLKQIRSTRTQ MLDQL DLQRKEH LNEAN+TLKQRL+EG  +N
Sbjct: 121 LNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
            LQ  Q+A D+ YGRQ  Q   D FFHPL+CEPTLQIGYQ DPITV  AGPS+NN++ GW
Sbjct: 181 -LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQNDPITVGGAGPSVNNYMAGW 240

Query: 241 LP 243
           LP
Sbjct: 241 LP 241

[Close]

BLAST of Cp4.1LG17g10640 vs. ExPASy Swiss-Prot
Match: O65874 (MADS-box transcription factor 1 OS=Pisum sativum OX=3888 GN=MTF1 PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.2e-102
Identity = 200/248 (80.65%), Postives = 222/248 (89.52%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKR+ENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREA--LELSSQQEYLKLKARYEALQRSQRNLLGEDL 120
           SSMLKTLERYQKCNYGAPE NV+++EA  LELSSQQEYLKLKARYE+LQRSQRNL+GEDL
Sbjct: 61  SSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQ 180
           GPLSSK+LE+LERQLD SLKQIRSTRTQ+MLDQL DLQRKEHLL EAN+ L+QR+ EGYQ
Sbjct: 121 GPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRM-EGYQ 180

Query: 181 VNALQLNQSADDMMYGR-QQAQPPSDAFF--HPLDCEPTLQIGY-QPDPITVVTAGPSMN 240
           +N+LQLN SA+DM YGR  Q     D  F   P++CEPTLQIGY Q DP +VVTAGPSMN
Sbjct: 181 INSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMN 240

Query: 241 NFLPGWLP 243
           N++ GWLP
Sbjct: 241 NYMGGWLP 247

[Close]

BLAST of Cp4.1LG17g10640 vs. ExPASy Swiss-Prot
Match: O22456 (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana OX=3702 GN=SEP3 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.7e-95
Identity = 191/247 (77.33%), Postives = 211/247 (85.43%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEDL 120
           SSML+TLERYQKCNYGAPEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGEDL
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQ 180
           GPLS+KELESLERQLD SLKQIR+ RTQ+MLDQL DLQ KE +L E NKTL+ RL +GYQ
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQ 180

Query: 181 VNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNN 240
           +  LQLN + +++  YGR   Q Q  S AFF PL+CEP LQIGYQ      + AGPS+NN
Sbjct: 181 M-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSVNN 240

Query: 241 FLPGWLP 243
           ++ GWLP
Sbjct: 241 YMLGWLP 245

[Close]

BLAST of Cp4.1LG17g10640 vs. ExPASy Swiss-Prot
Match: O04067 (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba OX=3728 GN=AGL9 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.7e-94
Identity = 189/249 (75.90%), Postives = 209/249 (83.94%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEDL 120
           SSM++TLERYQKCNYG PEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGEDL
Sbjct: 61  SSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQ 180
           GPLS+KELE LERQLD SLKQIR+ RTQ+MLDQL DLQ KE +LNE NKTL+ RL +GYQ
Sbjct: 121 GPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQ 180

Query: 181 VNALQLNQSADD--MMYGR---QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSM 240
           +  LQLN + +D  + YGR   QQ Q    AFF PL+CEP LQ+GYQ      + AGPS 
Sbjct: 181 M-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHGMEAGPSE 240

Query: 241 NNFLPGWLP 243
           NN++ GWLP
Sbjct: 241 NNYMLGWLP 248

[Close]

BLAST of Cp4.1LG17g10640 vs. NCBI nr
Match: XP_022959859.1 (agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita moschata] >XP_023004224.1 agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita maxima] >XP_023514991.1 agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucurbita pepo subsp. pepo] >KAG6592960.1 Agamous-like MADS-box protein MADS4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 470 bits (1209), Expect = 8.23e-167
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 242
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. NCBI nr
Match: XP_004140534.1 (agamous-like MADS-box protein MADS4 [Cucumis sativus] >KAE8646764.1 hypothetical protein Csa_005701 [Cucumis sativus])

HSP 1 Score: 468 bits (1204), Expect = 4.76e-166
Identity = 240/242 (99.17%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPP DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPGDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 242
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. NCBI nr
Match: NP_001284431.1 (MADS-box protein 5 [Cucumis melo] >AGZ03887.1 sepallata 3-like MADS-box protein [Cucumis melo])

HSP 1 Score: 467 bits (1201), Expect = 1.36e-165
Identity = 239/242 (98.76%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELE+LERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELENLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPP DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPGDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 242
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. NCBI nr
Match: XP_022155454.1 (agamous-like MADS-box protein AGL9 homolog [Momordica charantia])

HSP 1 Score: 467 bits (1201), Expect = 1.36e-165
Identity = 239/242 (98.76%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEY KLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYFKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPP+DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPTDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 242
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. NCBI nr
Match: XP_038906993.1 (agamous-like MADS-box protein MADS4 [Benincasa hispida])

HSP 1 Score: 465 bits (1196), Expect = 7.89e-165
Identity = 239/242 (98.76%), Postives = 240/242 (99.17%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQP  DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPSGDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 242
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. ExPASy TrEMBL
Match: A0A6J1KVP3 (agamous-like MADS-box protein AGL9 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497619 PE=4 SV=1)

HSP 1 Score: 470 bits (1209), Expect = 3.98e-167
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 242
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. ExPASy TrEMBL
Match: A0A6J1H9B2 (agamous-like MADS-box protein AGL9 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460797 PE=4 SV=1)

HSP 1 Score: 470 bits (1209), Expect = 3.98e-167
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 242
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. ExPASy TrEMBL
Match: V9PDT1 (MADS-box protein 5 OS=Cucumis melo OX=3656 GN=LOC103498850 PE=2 SV=1)

HSP 1 Score: 467 bits (1201), Expect = 6.61e-166
Identity = 239/242 (98.76%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELE+LERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELENLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPP DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPGDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 242
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. ExPASy TrEMBL
Match: A0A6J1DQB6 (agamous-like MADS-box protein AGL9 homolog OS=Momordica charantia OX=3673 GN=LOC111022593 PE=4 SV=1)

HSP 1 Score: 467 bits (1201), Expect = 6.61e-166
Identity = 239/242 (98.76%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEY KLKARYEALQRSQRNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYFKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240
           ALQLNQSADDMMYGRQQAQPP+DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPTDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

Query: 241 LP 242
           LP
Sbjct: 241 LP 242

[Close]

BLAST of Cp4.1LG17g10640 vs. ExPASy TrEMBL
Match: A0A5A7T8M0 (MADS-box protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00880 PE=4 SV=1)

HSP 1 Score: 462 bits (1189), Expect = 4.63e-164
Identity = 239/243 (98.35%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQ-RNLLGEDLG 120
           SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQ RNLLGEDLG
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQSRNLLGEDLG 120

Query: 121 PLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQV 180
           PLSSKELE+LERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL+EGYQV
Sbjct: 121 PLSSKELENLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQV 180

Query: 181 NALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPG 240
           NALQLNQSADDMMYGRQQAQPP DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPG
Sbjct: 181 NALQLNQSADDMMYGRQQAQPPGDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPG 240

Query: 241 WLP 242
           WLP
Sbjct: 241 WLP 243

[Close]

BLAST of Cp4.1LG17g10640 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 349.0 bits (894), Expect = 3.1e-96
Identity = 191/246 (77.64%), Postives = 211/246 (85.77%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREAL-ELSSQQEYLKLKARYEALQRSQRNLLGEDLG 120
           SSML+TLERYQKCNYGAPEPNV +REAL ELSSQQEYLKLK RY+ALQR+QRNLLGEDLG
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQRTQRNLLGEDLG 120

Query: 121 PLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQV 180
           PLS+KELESLERQLD SLKQIR+ RTQ+MLDQL DLQ KE +L E NKTL+ RL +GYQ+
Sbjct: 121 PLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM 180

Query: 181 NALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNF 240
             LQLN + +++  YGR   Q Q  S AFF PL+CEP LQIGYQ      + AGPS+NN+
Sbjct: 181 -PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSVNNY 240

Query: 241 LPGWLP 243
           + GWLP
Sbjct: 241 MLGWLP 244

[Close]

BLAST of Cp4.1LG17g10640 vs. TAIR 10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 348.6 bits (893), Expect = 4.1e-96
Identity = 191/247 (77.33%), Postives = 211/247 (85.43%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEDL 120
           SSML+TLERYQKCNYGAPEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGEDL
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQ 180
           GPLS+KELESLERQLD SLKQIR+ RTQ+MLDQL DLQ KE +L E NKTL+ RL +GYQ
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQ 180

Query: 181 VNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNN 240
           +  LQLN + +++  YGR   Q Q  S AFF PL+CEP LQIGYQ      + AGPS+NN
Sbjct: 181 M-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSVNN 240

Query: 241 FLPGWLP 243
           ++ GWLP
Sbjct: 241 YMLGWLP 245

[Close]

BLAST of Cp4.1LG17g10640 vs. TAIR 10
Match: AT1G24260.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 324.3 bits (830), Expect = 8.2e-89
Identity = 183/247 (74.09%), Postives = 201/247 (81.38%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREAL--ELSSQQEYLKLKARYEALQRSQRNLLGEDL 120
           SSML+TLERYQKCNYGAPEPNV +REAL  ELSSQQEYLKLK RY+ALQR+QRNLLGEDL
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQ 180
           GPLS+KELESLERQLD SLKQIR+ RTQ+MLDQL DLQ K              L +GYQ
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSK--------------LADGYQ 180

Query: 181 VNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNN 240
           +  LQLN + +++  YGR   Q Q  S AFF PL+CEP LQIGYQ      + AGPS+NN
Sbjct: 181 M-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSVNN 231

Query: 241 FLPGWLP 243
           ++ GWLP
Sbjct: 241 YMLGWLP 231

[Close]

BLAST of Cp4.1LG17g10640 vs. TAIR 10
Match: AT5G15800.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 283.5 bits (724), Expect = 1.6e-76
Identity = 159/253 (62.85%), Postives = 186/253 (73.52%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           S+MLKTL+RYQKC+YG+ E N    + LE +S +EYLKLK RYE LQR QRNLLGEDLGP
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELE-NSYREYLKLKGRYENLQRQQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180
           L+SKELE LERQLD SLKQ+RS +TQYMLDQL+DLQ KE +L E N+ L  +L +   V 
Sbjct: 121 LNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVR 180

Query: 181 ALQLNQSA------DDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQ----PDPITVVTAG 240
           +  +           ++ Y   QAQ  S   + PL+C PTLQ+GY      + IT  T  
Sbjct: 181 SHHMGGGGGWEGGEQNVTYAHHQAQ--SQGLYQPLECNPTLQMGYDNPVCSEQITATTQA 240

Query: 241 PSM--NNFLPGWL 242
            +   N ++PGW+
Sbjct: 241 QAQQGNGYIPGWM 250

[Close]

BLAST of Cp4.1LG17g10640 vs. TAIR 10
Match: AT3G02310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 282.0 bits (720), Expect = 4.7e-76
Identity = 156/252 (61.90%), Postives = 186/252 (73.81%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
           S+MLKTLERYQKC+YG+ E N    + LE +S +EYLKLK RYE LQR QRNLLGEDLGP
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELE-NSYREYLKLKGRYENLQRQQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRL-----IE 180
           L+SKELE LERQLD SLKQ+R  +TQYMLDQL+DLQ KEH+L +AN+ L  +L     + 
Sbjct: 121 LNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVR 180

Query: 181 GYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQ----PDPITVVTAGP 240
            + +          ++ YG  QA   S   +  L+C+PTLQIGY      + + V   G 
Sbjct: 181 HHHIGGGWEGGDQQNIAYGHPQAH--SQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQ 240

Query: 241 SM--NNFLPGWL 242
           S   N ++PGW+
Sbjct: 241 SQQGNGYIPGWM 249

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g10640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LLR0	2.3e-120	90.91	Agamous-like MADS-box protein MADS4 OS=Vitis vinifera OX=29760 GN=MADS4 PE=2 SV=...	[more]
Q03489	5.7e-111	86.36	Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida OX=4102 GN=FBP2 PE...	[more]
O65874	2.2e-102	80.65	MADS-box transcription factor 1 OS=Pisum sativum OX=3888 GN=MTF1 PE=2 SV=1	[more]
O22456	5.7e-95	77.33	Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana OX=3702 GN=SEP3 PE=1 S...	[more]
O04067	1.7e-94	75.90	Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba OX=3728 GN=AGL9 PE=2 ...	[more]

BLAST of Cp4.1LG17g10640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959859.1	8.23e-167	100.00	agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita moschata] >XP_0...	[more]
XP_004140534.1	4.76e-166	99.17	agamous-like MADS-box protein MADS4 [Cucumis sativus] >KAE8646764.1 hypothetical...	[more]
NP_001284431.1	1.36e-165	98.76	MADS-box protein 5 [Cucumis melo] >AGZ03887.1 sepallata 3-like MADS-box protein ...	[more]
XP_022155454.1	1.36e-165	98.76	agamous-like MADS-box protein AGL9 homolog [Momordica charantia]	[more]
XP_038906993.1	7.89e-165	98.76	agamous-like MADS-box protein MADS4 [Benincasa hispida]	[more]

BLAST of Cp4.1LG17g10640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KVP3	3.98e-167	100.00	agamous-like MADS-box protein AGL9 homolog isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1H9B2	3.98e-167	100.00	agamous-like MADS-box protein AGL9 homolog isoform X2 OS=Cucurbita moschata OX=3...	[more]
V9PDT1	6.61e-166	98.76	MADS-box protein 5 OS=Cucumis melo OX=3656 GN=LOC103498850 PE=2 SV=1	[more]
A0A6J1DQB6	6.61e-166	98.76	agamous-like MADS-box protein AGL9 homolog OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7T8M0	4.63e-164	98.35	MADS-box protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G0...	[more]

BLAST of Cp4.1LG17g10640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24260.1	3.1e-96	77.64	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	4.1e-96	77.33	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.3	8.2e-89	74.09	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.1	1.6e-76	62.85	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	4.7e-76	61.90	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..146
None	No IPR available	COILS	Coil	Coil	coord: 152..172
None	No IPR available	PANTHER	PTHR48019:SF29	AGAMOUS-LIKE MADS-BOX PROTEIN AGL9 HOMOLOG	coord: 1..229
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..229
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 68.71 coord: 23..38 score: 86.34 coord: 38..59 score: 67.51
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.3E-41 score: 154.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 2.9E-26 score: 90.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 33.515228
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..80 e-value: 3.0E-28 score: 99.4
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..76
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 91..173 e-value: 3.5E-26 score: 91.2
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 89..185 score: 15.193914
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..76 e-value: 8.3881E-47 score: 148.084

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g10640.1	Cp4.1LG17g10640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding