Cp4.1LG17g10540 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g10540
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	SNF2 domain-containing protein / helicase domain-containing protein
Location	Cp4.1LG17: 7939200 .. 7948409 (+)
RNA-Seq Expression	Cp4.1LG17g10540
Synteny	Cp4.1LG17g10540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTACGAGAGAAGGCTAAAAGCAGCGGCGAAGCTCATACTTCTCCATGATTCTGAGTCCGACAACTCCCCGAAGTCCTGCCCGGACGTCGGAGTTACGGCGACTCTGAAGCCCTACCAAGTCGAAGGAGTTCTATGGCTAATTCGGCGATATCATCTTGGCGTCAACGCTATTCTTGGTTATACTTCCATCTCACTTTTAGGAACTTTTGATGTTGAATGAGTTGACGAACCGGAATTTTTTTTCATGTACAATTTGAAACTGGTTGACACAAATCTTACCTAATAAGGTCGTATATACTCTGTGTTGTTAGATTATCCCTTCATTTCGTTCTAGCCGCCGCGATTTGAAAATCTTCTGATTTAAGAAGCCATGTTAATTTGAACAGACTCTACAGCAAGTCGCAGTAGCCAACTGACAACAATTTTGACTTTGATTCTATATTTTGTATTTCATCATTTCTCCTAGTTGTACTAATTTGATATCCAATGTTTTGACTGAAAATTTACTCAATATTCTTATCCAAATCTTCAATATAATAAAAATTTCTGACAACGCTATTTTGGTCTTCGAGTTCTAAAAATTGAACGTAGTGAGTTTAGTATCTTCGGCACAAATGTGCTCTGTTCAAGGCCGTAGATGCTGAAGTTTCTGCGTACTTTGTACTTCATCCATGCTTTCCTATCCGTTTGTAATCATATTCTCTGATTGTTGCAACTTCGCAAAGCAAATAACCTGTTTAAAATTCAACTTTTGTTGGCATATTGAACTTTGCTCTAATTTTATATACTGATGCACTGTAAAGGTGGCATGTCGTATAAATTTTGTGTGCACAATCTTTGTTAAGTAAGTTATTTTCTTTTCCAATGCTTGCGTTCTCATTCTTGTAGGATTTTAGCTGTTTGTGCGCCGTCTTTTGCTTGCTTTTTTGAACATTTAGAAAGTACTTAATATTTCAATTCAATGTAGAGTGGGTTGACATGTTGAAGGGAATTCTACTTTGCACGAACCTGGAGTTTTGAATGAAATTCTTCTGCACGTAATTTACAACAGTGATTCTTTTCCTTTTTTGAATTTTATATGCAGTTTTTTACTTACGTTTTGGTTAGAAAGTGCATGTTGATAATGACCTTTTTTTTCTCTTCCAGGTGATGAGGTATGGTTTCTTTACCATCACGATGTTGGAGTGCGGTTGCATTACATTCAATGCACTTTATGCTTGAAAATAATCCTTGAGATTTGGGATTGTGGTTGGGCACTTTTGATGTCCAATGTTGATTCACATATTGCAAACTTTTATTTTCTTGGATGTGAGAAATGCACAAAGATATCCTTAAAGTAAAGTGAGGTGATGTTTTGAAATGAGAAAATTATGTACGTAAATAGAGGATACACTATACCATATCATTATATGAAATTTATGATTTTTCATTAACATGGTTGGTGACTACATGACAATCTGACAAATGAAGAGGATATTTTTGTGAAGTTTCTCAATTACATGATTGAGCATAAATTTATGTTTTTCCTTAATATTAGATGGTGTACACATTCCTCCTTTTAGATCTAGTGGAAATTCCATATGGTCATTAGTAGGGAGAATGTTGGTGTCCTTTGTCGGTTTGGAATGTCTTTTGGTCACGTGATCCTTCTTTGAAGTTTGGCTTACTTATTGTTTCAATAATTTGGTTCGGCTTGGTTTGCCCCCTTTACTATCCAAATGGAGATTATCTCCACATATTCACTAAAGTGTTAGCACAAGCTTCTCTCCTTATTCAAAGGTTCATGGGTTTTCTCCTGTAGTTTGAAGGGTTTTCTTCATCAGCTTATCGTTGGTCTACTTCTTAACAAAAATCAATATGTGATTTTCCCCTGAATAACAATACCCTTGTCTCTTCTCTCATTTTGGTTTACTCATTACATTTTTTAAAATAACAATGATGATTTTTCCTTCCTAAAGTTTTATTCATTTTTTTCCTTTTTATTTCTATGCACCTATTTAAATGAGTTATGAAATCAGATGGGGCTGGGGAAGACATTGCAAGCTATTTCTTTTCTGAGTTACTTGAAGGTCCATCAGATATCACCTGGCCCATTTTGTGAGAACATCTTTCAGTTGTATTGTATTATTGATTTTAAAAACATTGGATCAGTTACTTTAGCACAGATTTGATTGACATGCCTTTTTGTTTATGATTTTCCATAGTGGTATTATGTCCTTTGAGCGTTACAGATGGTTGGGTATCTGAGATTGTCAGATTTGCTCCTCATCTAAATGTTCTTCAGTATGTTGGAGATAAAGAAACTCGACGAAATTCTCGCAGGCGCATTTTTGAGCATGCAACATCACAATCAGTGACTGATGTGAGTTGATGGCATTATATGCATTGTTCTCTTGAAGAAAAGGTCTTTTGAATTGAATATGGTGTGTTTTTTATTTGTTAAGCAATTGGAGATATTGACAGGTCATGTTGCCTTTTGATGTTCTGTTGACAACGTATGACATAGCATTGATAGATCAAGACTTCCTCTCTCAGATAGCCTGGCAGTATGCTGTCATTGATGAAGCACAGAGACTTAAAAACCCTTCAAGTGTACGTAAAGGCATCCTATACTCCCTCTTTTTACTCTTGAACATATACTACCCTAATTTTACATTTTATTAAGTACGGTTCCCATGTACATGTCTAATAAATGAAATATCATTGAGGTTTTTCTCTCATATCTCTCACTTTTTGTAAGATTACAAACAGAACTTAAATATCAGAACCTTTATTTATTTATTTATTTATTTTTTGATGTTGATCAATCTGTCTACAAATGGCTACATAATTGAGTTTTACTATGCGTGGAAAATGACCTTGTTAAGGTAATCTGTCTAATATTCTTCCTTTCGAGTAGATAAGTTCAACTTCCTTCCGAATTATTGGTGGAGAGGAATTTGAGAATGTTTGAAAACAAGAAACTTCCTTGGTTTGATGGTTGAATTCTGCAAGAATGAAAGCTTCTTCATGATGCTCTCTGTCCAAGCTTTTTGATACCTTTTCTTTACAGGATATTTACTTGAGTGGGGATGCATTTAATTCTTCTTTGTAAATTTTGCAATTTTCCGTTTTCTTTTCAATTGTTGTGAAGTTTGTATCTTTTATGCATTAGTCTCTTTTCATTTCTTCAATAGCTTCGTTTCTTTAGAGTAGATAAGTTCACACATCTAATTATTTGAGTCAGCTAGTTTCTTGAGTTTGAAATTACTTGCTGATTGGAAATGAAGTGTTTCCTCTTTTACAGTTCTTATTGCATAGATGTGTAATATTATGTGAAAACAGGTTCTGTACAATGTACTTAAAGAGCGTTTTCTTATCCCGAGGCGGTTATTGATGACTGGAACTCCTATTCAGAACAATCTCAGTGAACTTTGGGCCTTATTGCATTTCTGCATGCCTTCAGTGTTTGGAACACTGGATCAGTTTATTTCTACGTTCAAGGAAGCTGGAGATCTTACTTCTGGTGATCCATTTTCCTTCTATCATAACATTTTTTTGCAAGTCCTCTGGGATAACGCATGTTAGTGTAAAGAATGAATGTATATATTATATAAAAAGTTTTTGAGTTACAAATTATATTAAGCATGACAAAAGTGAAAAAAAAAAGGAATTTTGTTTTAAATTATATTTTAAAACTTTTTCTGGCATTTGACCTCTATTTTGAGATATGAAAAATGGTTATAACATAAGAATGACTTAGGCTTCTCTTCCTCTAAATGGTTACATGTCTAGGTTTGTTGTTGCTTGAAGTAGTACAAATTCTAATTCTATTTGAGGCCACTTATGTTCGTTTCAGTTTTGTTTGTTTAATGATCAGGACATCATTTCAATTTGGATCATACAGTTGGAAGAGGTAGAAGGAAGCCATGTATTTTCTAAATCCATAAGTGCGTCTGTTTGTTATTTATAGGTCATGGAAAAATTCATGGAAATGGGCAATTTAAGAGTTTAAAGTATATACTATCAGCCTTCCTTTTGAGAAGAACAAAAGCCAAGCTTAGTGAATCTGGAGTTCTGTTGCTCCCACCACTTACTGAGATAACAGTGTAAGCATTGTGCTAACTGCTTTATTGATACTCTTATAATTTGTTAAAAGTTCAATATCTGATTGCTTTTTCCTATAGGATGGTACCATTGGTTAACCTTCAAAGAAAGGTCTATATGTCAATATTGAGGAAAGAGCTGCCTAAACTACTTGCACTTTCTTCTGGTTCCTCAAACCACCAATCGTTACAGAATGTCGTATGTCATTTTCTTGAACTTCTATGCTTCACTCTAAGTCAGTTAGTTATAGTTGGTGAATGACTGTTTATGATAGGTCAGTGCCAGGATTTCTTGGTCTTGAGTTAACTGAGAATAGTGACTAATTTTTTGCCCCTTCTTAGGTGTCTTCAGTTATAATGAAATAGTTTAAGGCAACAGGTTCTACATGATTGCATAAAATCTAACAATTTATCTTTTATTTTGTTAATGTTTTTCTTCTCACATTATTTTATGGATGAAAATTTTGTGTTAAAATTGTCAAATAAGTGACGATACTTATTCAAACAGCTATTGGCGAACTGTATTGTGGTGTTCTTGTGTAACTGCGAATATTGTTTGAATTTTTTTGCTCTTGCTCTGCAGGTGATGCAACTTCGAAAAGCTTGTAGCCATCCTTATCTTTTTCCTGGTATTGAGCCTGAACCTTATGAAGAAGGCGAGCACCTGGTTCAGGTAGCTTGTTCTTTATTTTGTTTACTACATGTCGGTGCGTTTATAGGGTAGAGAGAGAAGGGGAAGGGACAGTAGTCTGCGCTTTCTTTATTTGTGAATGTGGGAGTAGCCATTTTTTGAAAAACCAAAAAAAAAAAAAAATAGACTTTCTTAAAATTTAACCTTCTGGATGAGTTACATTTCTGCTCCGTAAATTTAAAAATACTTATGATGTCATGTCAGAATTATTAATATTATAAAAGTGTAAAAGTGTGAAGTGTGTGGTAAGCTTTTCGTTCTTGCATCTAATGGAAAAATAACAAAAGAGATCAAGTGGAACTATTTTGGCAAATTTAGGGTTAAATTGTATGGTTTCAAAATTTAGGAATTGAATAGACGTGAACAAACACAAAGAAAGTTAAAGAGCTAAAATTGTAATTTTTTATCTTGTTAATTTGTGTGTGATTGATCTCGGTAAAGTTCTTACAAGACAATTTCTGCATGGGTTTACTTTCTAATCTCAAATACGTTTGCCTGATTCTAAAAGAAGCGGATGTGAGTTCTATATCTCATTAGTTTCAAATTATTGAGAATTTCCATCTTTATTTTCTGCCTTTTCTAACTTTCCAATTGCTTTTGGTTCATGGCCTTCTAATCAGGCTAGCGGCAAGCTTGTGATTCTAGATCAAGTACTTCAGAAACTACATGAGTCTGGACATCGTGTCCTCTTATTTGCTCAGATGACCCATACACTTGATATATTACAGGTTTGAGGTCCCTCTGAACAGCTTCACACATATTAACTTACATTGTCATTTAGCATTATAAAATGATTTTATGATTAAAGTTAGAGCATCATCTATGTTTCTCACATATTAGGACTTCTTGGAGTTGCGGAATTTTTCCTATGAGCGTCTTGATGGATCAATTCGAGCCGAGGAGCGTTTTGCTGCAATCAGGAGCTTCAGCTTGAATTGTAGTGGGAGTTCTCAAACAACCCGTAATGATGCATTTGTTTTTTTGATCTCTACAAGAGCCGGGGGAGTTGGTTTGAATCTAGTGTCGGCTGATACGGTGAGCTTTAACTTTTTATATGTTTTATATGAACTTAATTATCGTGCTTTGACTTTTCATCAGTATTGTCGTTCTTATTTGAGCACGTGCTTTTATAATTGTTATTGCTTAGTTTTGTTTATTCATAATTGTTCAACATATTGTAGGTTATATATATTCGATGAAGAAGATAATTGTTATTACTCACTTTTTTTATCCATTAATGTTCATCATATTGTAGGTTATATTCTATGAACAAGATTGGAATCCACAGGTGGACAAGCAAGCTTTACAAAGGGCACATCGAATTGGTCAAATAAATCATGTGTTGTCTATAAACTTAGTTACAGCCCAAACTATCGAAGAAGTAAGATCTGCCATGTAATATTTGAAACAAACGTGATCGTCTTAGTTATTTGTGATTCTAGTTTCTTTATGTAGGTTATTATGCGAAGGGCAGAAAGAAAGTTACAACTTAGCAAAAACGTTATTGGTGAAGATTATATAGATGAGGAAGCAGAAGAAATTGCAGGGAATGAAACTGGTGACTTGAGATCGATCATATTTGGGTTACATATTTTTGATCAAGGTCAAATGGACAATGAAAAATCAGGGGAGTTTGAGGCGTCAAATGTCAGTGCAATGGCTGAAAAAGTTGTTGCAGTACGCCATAAAAAAGTATCAAACAAGGATGATGCAAGCTTTTTGGTCAATACAATGACCTTATCAAATGGTTGTGATCTTCCTATTCAAGAAGGTACTATCTCGGTCAATTTTGACCCAGGCGTTGATGAGGCGTCGTATCGCTCTTGGATAGAGAAGTTCAAGGAAGCATCCCAATCTGGTGCTAACCAAATCATGGAGTTGGAAAACCGGAAAACTTTATCTAGAGATAAGAGCCTAAAACTTGAGGATGTAAAGAAGAAAGCAGAAGAAAAGAAACTGGCAAAATGGGAAGCCCTTGGGTACCATTCGTTATCTGTTGAAGACCCAATCTTGCCTCTTGATAGTGATCTAATTTCAGATTCTGGCTCTGTTCATTTTGTCTATGGGGACTGCACACATCCGTCAAGGAATTGTATATCTGAGCCTACAATCATATTCAGGTTTGAAGTTTATGGCTTTGTAATATGGGCAAAAAAATATTCATGATACCCCCCTTTTCTCTGTTTCCTTGATTATCCTATCTCGTACAAGTTAATCTTGGTGCCTTTTTGTTTTCTTTTCTTCTATTGTATAAAGTGAATAGTTTTTCCAAATCCAACAAGTCTTTTTGGTAGCAAGCACTTGGGGCATCGTAACCCTAGTTAGCCGCTGCTCATCGTTAAGGATTCTATGAACGCCACCGATTGCATCTTCTATCATCACCAGAATCGTCTGTATTGATCAACGATCGTCGTTGTCTTCTACCCAACTGTTTACTTATCAGCATCAGAATAGTTTAAAATATACGTTTGCTATTGTCCTTTCAAGTCTTAGCCTCAGCAATGTCAAAATTGTGCAAGTGTTGCTTGGGTTAGTTTTTTCTTTAGTCGTCATTGGGAACAGTTTTCAACCAGTTATAAATGCACCTTAGTTAGAACCTCGCTGATTCCTTCGTTTTCCCCATTGCAAAAATAGTTTCTTTTTTTAATCATTGTTATGCTTCTTTTTGTTTATTTTGTTTTTGTGGGGATGAGAAAAAGAGGCAATGATCTTATCTGTTCCACTTATTGTATCTATTCACAGTTGTGTTGACGATTCTGGAAGCTGGGGGCATGGCGGAATGTTTGATGCTCTGGCAAAGCTTTCTGATAGCATCCCTTCTGCCTATGAACGAGCTTCTGAATTTAGGGACCTACATCTTGGTGATCTTCATCTCATAAAACTCGGTCAGTGTTTTGCTTTTGCTCGGTGCTAAGATCATGATACAAGTTGCTCCATGTTGTTTGACTGTAATTTGTTTTCTTTTTAGATGACAAATTGAGTTTAAATCACCCAAACACCAAGAGGTGAATTACATGAAAGTTATCCATTTTGAAATTATAGTTACTTCTACAAACATAAAGGATTCGATGTGAGTCGAACCGACCGACCCCTTACTACTTCTACTACTTTTTCATTGCGTATAACTAACTAGCTTGACTACCCGAATTACCGCTCGCATTTTCACATTTCTGTATCGACAAGCTCAATAGAATCCTACATAAAATAGCTTAAGAGGGGACGTGGGACTATATTCCCGAAATGGTCTTCTTATTCCTGTTTGTTTCCCTTCTTGTGGCTTAATGCAGAGGACAACAAGGAACAGAGCGATAAAGCTCCTCAATGGGTTGCTTTGGGTGTTGTACAATCTTATAATCCGAGGCGGAAAGTCCCCAGAAGCAAGATTTCTCTTCCAGATTTGGAGAACTGCATATTAAAAGCATCATCTGCAGCGTCGCAACATTCTGGTAACCATTGCTACATTTAGTTCATGAATATGCATACCTGCTGGCCCGTCACGTTTTCTTCTGTTTTGTTCCTTTGATCTGAACAAGTTCCCTCAATACGCCAATTGTTTCTCTGTCATTCTATTGAAATTGTTGTTATTCATTTCTTTTCTAAAAGCTTCAATCCACATGCCGCGTATTGGTTACCAAGACGGATCAGATCGCTCCGAGTGGTACACCGTGGAACGTCTTCTCCGAAAATACGCCTCCATCTACAGCATTAAAATCCATGTGTATGATTCTCTTTGCTTGCCTTTTGCATGATTTCTATGTTGGTGCTGATGTAAGTTGGATTTTCTTGCAGGTACTACTACCGAAGGACATCTTGAAACTGTCCAAACTTGGATGGCCGTTCTTGGCACACGTTTGTATGTATATATACATGTTCTAGAGTACCTTCCTAGAGGTTTTCTGGATTAGAATCTTCCACTTTTTATTTCAGCACCTCTAATATTTGAGATGAAAATATATAATTGTTCGTTTTTCCAATTAGAAACTAATCCAATGGAGCAAAAAGAAACAGTGCCTCCGATCATTGTCTGAGGACACACGCCAGTCGATACAAGTGCTTGTGCTGACCGATGCTTGGTTCGATTGCATGCTTGGCTTGACACCGAACCCTTTTTTATACATCATACCACACTGCTACTAAACTAACAACACAACACCTCAAACTCCAAAAGTACAGAAAAAATCAAACTTCCATACTTGGAATCAAGTTCAGTCCCAACATAAACACTCGTCCAAACCATGCTTATTGTATATTAAAAGAGATAAAACATCCATCATATTTAACCTTCGGATCAAAGATGACAATATCTACTAGCGGTGAGTTTGGACTGTTACTAATAGTATTAGAGTTAGACATCGGTGATGTACTAGCGATGGCGTTAGGCCCCCAAAGGAGTGAATTGTGAAATCGCATGTTGGTTGAAAAGGGAAAT

mRNA sequence

ATGAATTACGAGAGAAGGCTAAAAGCAGCGGCGAAGCTCATACTTCTCCATGATTCTGAGTCCGACAACTCCCCGAAGTCCTGCCCGGACGTCGGAGTTACGGCGACTCTGAAGCCCTACCAAGTCGAAGGAGTTCTATGGCTAATTCGGCGATATCATCTTGGCGTCAACGCTATTCTTGGTGATGAGGTATGGTTTCTTTACCATCACGATGTTGGAGTGCGGTTGCATTACATTCAATGCACTTTATGCTTGAAAATAATCCTTGAGATTTGGGATTGTGGTTGGGCACTTTTGATGTCCAATGTTGATTCACATATTGCAAACTTTTATTTTCTTGGATTGGTATTATGTCCTTTGAGCGTTACAGATGGTTGGGTATCTGAGATTGTCAGATTTGCTCCTCATCTAAATGTTCTTCAGTATGTTGGAGATAAAGAAACTCGACGAAATTCTCGCAGGCGCATTTTTGAGCATGCAACATCACAATCAGTGACTGATGTCATGTTGCCTTTTGATGTTCTGTTGACAACGTATGACATAGCATTGATAGATCAAGACTTCCTCTCTCAGATAGCCTGGCAGTATGCTGTCATTGATGAAGCACAGAGACTTAAAAACCCTTCAAGTGTTCTGTACAATGTACTTAAAGAGCGTTTTCTTATCCCGAGGCGGTTATTGATGACTGGAACTCCTATTCAGAACAATCTCAGTGAACTTTGGGCCTTATTGCATTTCTGCATGCCTTCAGTGTTTGGAACACTGGATCAGTTTATTTCTACGTTCAAGGAAGCTGGAGATCTTACTTCTGGTGATCCATTTTCCTTCTATCATAACATTTTTTTGCAAGTCCTCTGGGATAACGCATGTCATGGAAAAATTCATGGAAATGGGCAATTTAAGAGTTTAAAGTATATACTATCAGCCTTCCTTTTGAGAAGAACAAAAGCCAAGCTTAGTGAATCTGGAGTTCTGTTGCTCCCACCACTTACTGAGATAACAGTGATGGTACCATTGGTTAACCTTCAAAGAAAGGTCTATATGTCAATATTGAGGAAAGAGCTGCCTAAACTACTTGCACTTTCTTCTGGTTCCTCAAACCACCAATCGTTACAGAATGTCGTGATGCAACTTCGAAAAGCTTGTAGCCATCCTTATCTTTTTCCTGGTATTGAGCCTGAACCTTATGAAGAAGGCGAGCACCTGGTTCAGGCTAGCGGCAAGCTTGTGATTCTAGATCAAGTACTTCAGAAACTACATGAGTCTGGACATCGTGTCCTCTTATTTGCTCAGATGACCCATACACTTGATATATTACAGGACTTCTTGGAGTTGCGGAATTTTTCCTATGAGCGTCTTGATGGATCAATTCGAGCCGAGGAGCGTTTTGCTGCAATCAGGAGCTTCAGCTTGAATTGTAGTGGGAGTTCTCAAACAACCCGTAATGATGCATTTGTTTTTTTGATCTCTACAAGAGCCGGGGGAGTTGGTTTGAATCTAGTGTCGGCTGATACGGTTATATTCTATGAACAAGATTGGAATCCACAGGTGGACAAGCAAGCTTTACAAAGGGCACATCGAATTGGTCAAATAAATCATGTGTTGTCTATAAACTTAGTTACAGCCCAAACTATCGAAGAAGTTATTATGCGAAGGGCAGAAAGAAAGTTACAACTTAGCAAAAACGTTATTGGTGAAGATTATATAGATGAGGAAGCAGAAGAAATTGCAGGGAATGAAACTGGTGACTTGAGATCGATCATATTTGGGTTACATATTTTTGATCAAGGTCAAATGGACAATGAAAAATCAGGGGAGTTTGAGGCGTCAAATGTCAGTGCAATGGCTGAAAAAGTTGTTGCAGTACGCCATAAAAAAGTATCAAACAAGGATGATGCAAGCTTTTTGGTCAATACAATGACCTTATCAAATGGTTGTGATCTTCCTATTCAAGAAGGTACTATCTCGGTCAATTTTGACCCAGGCGTTGATGAGGCGTCGTATCGCTCTTGGATAGAGAAGTTCAAGGAAGCATCCCAATCTGGTGCTAACCAAATCATGGAGTTGGAAAACCGGAAAACTTTATCTAGAGATAAGAGCCTAAAACTTGAGGATGTAAAGAAGAAAGCAGAAGAAAAGAAACTGGCAAAATGGGAAGCCCTTGGGTACCATTCGTTATCTGTTGAAGACCCAATCTTGCCTCTTGATAGTGATCTAATTTCAGATTCTGGCTCTGTTCATTTTGTCTATGGGGACTGCACACATCCGTCAAGGAATTGTATATCTGAGCCTACAATCATATTCAGTTGTGTTGACGATTCTGGAAGCTGGGGGCATGGCGGAATGTTTGATGCTCTGGCAAAGCTTTCTGATAGCATCCCTTCTGCCTATGAACGAGCTTCTGAATTTAGGGACCTACATCTTGGTGATCTTCATCTCATAAAACTCGAGGACAACAAGGAACAGAGCGATAAAGCTCCTCAATGGGTTGCTTTGGGTGTTGTACAATCTTATAATCCGAGGCGGAAAGTCCCCAGAAGCAAGATTTCTCTTCCAGATTTGGAGAACTGCATATTAAAAGCATCATCTGCAGCGTCGCAACATTCTGCTTCAATCCACATGCCGCGTATTGGTTACCAAGACGGATCAGATCGCTCCGAGTGGTACACCGTGGAACGTCTTCTCCGAAAATACGCCTCCATCTACAGCATTAAAATCCATGTGTACTACTACCGAAGGACATCTTGAAACTGTCCAAACTTGGATGGCCGTTCTTGGCACACGTTTAAACTAATCCAATGGAGCAAAAAGAAACAGTGCCTCCGATCATTGTCTGAGGACACACGCCAGTCGATACAAGTGCTTGTGCTGACCGATGCTTGGTTCGATTGCATGCTTGGCTTGACACCGAACCCTTTTTTATACATCATACCACACTGCTACTAAACTAACAACACAACACCTCAAACTCCAAAAGTACAGAAAAAATCAAACTTCCATACTTGGAATCAAGTTCAGTCCCAACATAAACACTCGTCCAAACCATGCTTATTGTATATTAAAAGAGATAAAACATCCATCATATTTAACCTTCGGATCAAAGATGACAATATCTACTAGCGGTGAGTTTGGACTGTTACTAATAGTATTAGAGTTAGACATCGGTGATGTACTAGCGATGGCGTTAGGCCCCCAAAGGAGTGAATTGTGAAATCGCATGTTGGTTGAAAAGGGAAAT

Coding sequence (CDS)

ATGAATTACGAGAGAAGGCTAAAAGCAGCGGCGAAGCTCATACTTCTCCATGATTCTGAGTCCGACAACTCCCCGAAGTCCTGCCCGGACGTCGGAGTTACGGCGACTCTGAAGCCCTACCAAGTCGAAGGAGTTCTATGGCTAATTCGGCGATATCATCTTGGCGTCAACGCTATTCTTGGTGATGAGGTATGGTTTCTTTACCATCACGATGTTGGAGTGCGGTTGCATTACATTCAATGCACTTTATGCTTGAAAATAATCCTTGAGATTTGGGATTGTGGTTGGGCACTTTTGATGTCCAATGTTGATTCACATATTGCAAACTTTTATTTTCTTGGATTGGTATTATGTCCTTTGAGCGTTACAGATGGTTGGGTATCTGAGATTGTCAGATTTGCTCCTCATCTAAATGTTCTTCAGTATGTTGGAGATAAAGAAACTCGACGAAATTCTCGCAGGCGCATTTTTGAGCATGCAACATCACAATCAGTGACTGATGTCATGTTGCCTTTTGATGTTCTGTTGACAACGTATGACATAGCATTGATAGATCAAGACTTCCTCTCTCAGATAGCCTGGCAGTATGCTGTCATTGATGAAGCACAGAGACTTAAAAACCCTTCAAGTGTTCTGTACAATGTACTTAAAGAGCGTTTTCTTATCCCGAGGCGGTTATTGATGACTGGAACTCCTATTCAGAACAATCTCAGTGAACTTTGGGCCTTATTGCATTTCTGCATGCCTTCAGTGTTTGGAACACTGGATCAGTTTATTTCTACGTTCAAGGAAGCTGGAGATCTTACTTCTGGTGATCCATTTTCCTTCTATCATAACATTTTTTTGCAAGTCCTCTGGGATAACGCATGTCATGGAAAAATTCATGGAAATGGGCAATTTAAGAGTTTAAAGTATATACTATCAGCCTTCCTTTTGAGAAGAACAAAAGCCAAGCTTAGTGAATCTGGAGTTCTGTTGCTCCCACCACTTACTGAGATAACAGTGATGGTACCATTGGTTAACCTTCAAAGAAAGGTCTATATGTCAATATTGAGGAAAGAGCTGCCTAAACTACTTGCACTTTCTTCTGGTTCCTCAAACCACCAATCGTTACAGAATGTCGTGATGCAACTTCGAAAAGCTTGTAGCCATCCTTATCTTTTTCCTGGTATTGAGCCTGAACCTTATGAAGAAGGCGAGCACCTGGTTCAGGCTAGCGGCAAGCTTGTGATTCTAGATCAAGTACTTCAGAAACTACATGAGTCTGGACATCGTGTCCTCTTATTTGCTCAGATGACCCATACACTTGATATATTACAGGACTTCTTGGAGTTGCGGAATTTTTCCTATGAGCGTCTTGATGGATCAATTCGAGCCGAGGAGCGTTTTGCTGCAATCAGGAGCTTCAGCTTGAATTGTAGTGGGAGTTCTCAAACAACCCGTAATGATGCATTTGTTTTTTTGATCTCTACAAGAGCCGGGGGAGTTGGTTTGAATCTAGTGTCGGCTGATACGGTTATATTCTATGAACAAGATTGGAATCCACAGGTGGACAAGCAAGCTTTACAAAGGGCACATCGAATTGGTCAAATAAATCATGTGTTGTCTATAAACTTAGTTACAGCCCAAACTATCGAAGAAGTTATTATGCGAAGGGCAGAAAGAAAGTTACAACTTAGCAAAAACGTTATTGGTGAAGATTATATAGATGAGGAAGCAGAAGAAATTGCAGGGAATGAAACTGGTGACTTGAGATCGATCATATTTGGGTTACATATTTTTGATCAAGGTCAAATGGACAATGAAAAATCAGGGGAGTTTGAGGCGTCAAATGTCAGTGCAATGGCTGAAAAAGTTGTTGCAGTACGCCATAAAAAAGTATCAAACAAGGATGATGCAAGCTTTTTGGTCAATACAATGACCTTATCAAATGGTTGTGATCTTCCTATTCAAGAAGGTACTATCTCGGTCAATTTTGACCCAGGCGTTGATGAGGCGTCGTATCGCTCTTGGATAGAGAAGTTCAAGGAAGCATCCCAATCTGGTGCTAACCAAATCATGGAGTTGGAAAACCGGAAAACTTTATCTAGAGATAAGAGCCTAAAACTTGAGGATGTAAAGAAGAAAGCAGAAGAAAAGAAACTGGCAAAATGGGAAGCCCTTGGGTACCATTCGTTATCTGTTGAAGACCCAATCTTGCCTCTTGATAGTGATCTAATTTCAGATTCTGGCTCTGTTCATTTTGTCTATGGGGACTGCACACATCCGTCAAGGAATTGTATATCTGAGCCTACAATCATATTCAGTTGTGTTGACGATTCTGGAAGCTGGGGGCATGGCGGAATGTTTGATGCTCTGGCAAAGCTTTCTGATAGCATCCCTTCTGCCTATGAACGAGCTTCTGAATTTAGGGACCTACATCTTGGTGATCTTCATCTCATAAAACTCGAGGACAACAAGGAACAGAGCGATAAAGCTCCTCAATGGGTTGCTTTGGGTGTTGTACAATCTTATAATCCGAGGCGGAAAGTCCCCAGAAGCAAGATTTCTCTTCCAGATTTGGAGAACTGCATATTAAAAGCATCATCTGCAGCGTCGCAACATTCTGCTTCAATCCACATGCCGCGTATTGGTTACCAAGACGGATCAGATCGCTCCGAGTGGTACACCGTGGAACGTCTTCTCCGAAAATACGCCTCCATCTACAGCATTAAAATCCATGTGTACTACTACCGAAGGACATCTTGA

Protein sequence

MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAILGDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNFDPGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEALGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYASIYSIKIHVYYYRRTS

Homology

[Close]

BLAST of Cp4.1LG17g10540 vs. ExPASy Swiss-Prot
Match: F4IV45 (Probable helicase CHR10 OS=Arabidopsis thaliana OX=3702 GN=CHR10 PE=3 SV=1)

HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 575/920 (62.50%), Postives = 700/920 (76.09%), Query Frame = 0


Query: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60
           M YERRL+AAA++IL  +++  N+P  C + GVTATLKP+QVEGV WLI++Y LGVN +L
Sbjct: 15  MEYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVL 74

Query: 61  GDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPL 120
                 L    +G  L  I     LK                +           LVLCPL
Sbjct: 75  E-----LDQMGLGKTLQAISFLSYLK------------FRQGLPGPF-------LVLCPL 134

Query: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180
           SVTDGWVSEI RF P+L VL+YVGDK  R + R+ +++H   +S     LPFDVLLTTYD
Sbjct: 135 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDH-VKKSSKGHFLPFDVLLTTYD 194

Query: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240
           IAL+DQDFLSQI WQYA+IDEAQRLKNP+SVLYNVL E+FLIPRRLL+TGTPIQNNL+EL
Sbjct: 195 IALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTEL 254

Query: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQF 300
           WAL+HFCMP VFGTLDQF+S FKE GD  SG   S                   +    +
Sbjct: 255 WALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVS-------------------NDKETY 314

Query: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360
           KSLK+IL AF+LRRTK+ L ESG L+LPPLTE+TVMVPLV+LQ+K+Y SILRKELP LL 
Sbjct: 315 KSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLE 374

Query: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420
           LSSG SNH SLQN+V+QLRKACSHPYLFPGIEPEP+EEGEHLVQASGKL++LDQ+L++LH
Sbjct: 375 LSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKLLVLDQLLKRLH 434

Query: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSG--SSQ 480
           +SGHRVLLF+QMT TLDILQDF+ELR +SYERLDGS+RAEERFAAI++FS        S+
Sbjct: 435 DSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSE 494

Query: 481 TTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSIN 540
              ++AFVF+ISTRAGGVGLNLV+ADTVIFYEQDWNPQVDKQALQRAHRIGQI+HVLSIN
Sbjct: 495 VDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSIN 554

Query: 541 LVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQ 600
           LVT  ++EEVI+RRAERKLQLS NV+G++   EE EE    + GDLRS++FGL  FD  +
Sbjct: 555 LVTEHSVEEVILRRAERKLQLSHNVVGDNM--EEKEE----DGGDLRSLVFGLQRFDPEE 614

Query: 601 MDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVN 660
           + NE+S   +   +S++AEKVVA+R     +K++  F +N+     G        T S +
Sbjct: 615 IHNEESDNLKMVEISSLAEKVVAIRQNVEPDKEERRFEINSSDTLLG-------NTSSAS 674

Query: 661 FDPGVDEASYRSWIEKFKEASQSGANQ-IMELENRKTLSRDKSLKLEDVKKKAEEKKLAK 720
            D  +DEASY SW+EK KEA++S  ++ I+EL NRK LS +++L++E  +KKAEEKKLA 
Sbjct: 675 LDSELDEASYLSWVEKLKEAARSSKDEKIIELGNRKNLSEERNLRIEAARKKAEEKKLAT 734

Query: 721 WEALGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSW 780
           W A GY SLSVE+PILP D D  SD+GSV+FV+GDCT+PS     EP IIFSCVDDSG+W
Sbjct: 735 WGAHGYQSLSVEEPILPDDVDSSSDAGSVNFVFGDCTNPS-TVSHEPAIIFSCVDDSGNW 794

Query: 781 GHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSD---KAPQWVALGV 840
           G GGMFDAL+KLS+++P+AY RASEF+DLHLGDLHLIK++DN +Q +     P WVA+ V
Sbjct: 795 GRGGMFDALSKLSNTVPTAYHRASEFKDLHLGDLHLIKIDDNDDQQNTQASKPLWVAVAV 854

Query: 841 VQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERL 900
            QSYN RRKVPRS IS+PDLE+C+ KAS +ASQ SAS+HMPRIGYQDGSDRS+WYTVERL
Sbjct: 855 TQSYNSRRKVPRSSISIPDLESCLAKASFSASQKSASLHMPRIGYQDGSDRSQWYTVERL 876

Query: 901 LRKYASIYSIKIHVYYYRRT 915
           LRKY+SI+++KI VYYYRR+
Sbjct: 915 LRKYSSIFTVKIFVYYYRRS 876

[Close]

BLAST of Cp4.1LG17g10540 vs. ExPASy Swiss-Prot
Match: Q7ZU90 (Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio OX=7955 GN=chd1l PE=2 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.0e-124
Identity = 336/935 (35.94%), Postives = 474/935 (50.70%), Query Frame = 0


Query: 37  LKPYQVEGVLWLIRRYHLGVNAILGDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGW 96
           L+PYQ++GV WL          ILGDE+                   C  I L  +  G 
Sbjct: 35  LRPYQLDGVKWLSLCMKNQQGCILGDEMGL--------------GKTCQTISLLAYARG- 94

Query: 97  ALLMSNVDSHIANFYFLGLVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRI 156
           +L M+             LVLCPL+V + W  E+ RF P L+V+ Y GDKE R   ++ +
Sbjct: 95  SLKMNGP----------FLVLCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQNL 154

Query: 157 FEHATSQSVTDVMLPFDVLLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVL 216
                          F VLLTTY++ L D  +L    W+  V+DEA RLKN  S+L+  L
Sbjct: 155 KSDPR----------FHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTL 214

Query: 217 KERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSF 276
           KE F +  R+L+TGTPIQNNL E+++LL F  PSVF  L + +  F              
Sbjct: 215 KE-FTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSVF--LPEAVEDFV------------- 274

Query: 277 YHNIFLQVLWDNACHGKIHGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVM 336
             N +  +  + A   ++H          +L  FLLRR KA+++      LP  TE+ V 
Sbjct: 275 --NAYADIQTEPALVDELH---------QVLQPFLLRRVKAEVAAE----LPKKTELVVF 334

Query: 337 VPLVNLQRKVYMSILRKELPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPY 396
             L  LQ++ Y +IL ++L    A  +  S    L NV+MQLRK   HPYLF G+EPEP+
Sbjct: 335 HGLSALQKRYYKAILMRDLD---AFRTDQSTKTRLLNVLMQLRKCVDHPYLFDGVEPEPF 394

Query: 397 EEGEHLVQASGKLVILDQVLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGS 456
           E GEHLV+ASGKL +LD +L  L E GH VLLF+QMT  LDILQD+LE R +SYERLDGS
Sbjct: 395 EMGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGS 454

Query: 457 IRAEERFAAIRSFSLNCSGSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQ 516
           +R EER  AI++FS            D F+FL+ST+AGGVG+NL +ADTVIF + D+NPQ
Sbjct: 455 VRGEERNLAIKNFS----------TKDVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQ 514

Query: 517 VDKQALQRAHRIGQINHVLSINLVTAQTIEEVIMRRAERKLQLSKNVIGE---DYIDEEA 576
            D QA  RAHRIGQ   V  I L+   TIEE+I  RA  KL+L+  VI E     +D+  
Sbjct: 515 NDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVIEEGRFSLLDQAQ 574

Query: 577 EEIAGNETGDLRSIIFGLHIFDQGQMDNEKSGEFE-ASNVSAMAEKVVAVRHKKV--SNK 636
              +G +  ++  + FG+      +  + +  + +     S   + +    H K+  SN+
Sbjct: 575 SAASGLQLSEI--LKFGVDKLLSSEESSVQDVDLQLILGQSRDGQWLTDEEHAKLNESNE 634

Query: 637 DDASFL--VNTMTLSNGCDLPIQEGTISVNFDPGV-DEASYRSWIEK----FKEASQSG- 696
           ++   +   N M    G D          + DP   DE ++   +EK     ++A + G 
Sbjct: 635 EEDEDMEGQNHMYYFEGKD---------YSKDPSAEDEKTFELLLEKQFAEMEDAEKEGR 694

Query: 697 -------------------------ANQIMELENRKTLSRDKSLKLEDVKKKAEE----- 756
                                      ++ E   ++  +  K  KL++ +KK +E     
Sbjct: 695 ALRNKAGVSLSGPLINPARKKRPLTEAELEERRQKRQAAAAKRAKLQEERKKQQEELNYK 754

Query: 757 KKLAKWEALGYHSL------SVEDPILPLDSDLI------SDSGSVHFVYGDCTHPSRNC 816
           KK+A W++ GY SL      S  + + P + D +      SD  ++ +V GD THP  + 
Sbjct: 755 KKMAWWDSCGYRSLCLPRVDSEGEDMEPDEDDHVSFSSTDSDHTAIRYVLGDVTHPQAD- 814

Query: 817 ISEPTIIFSCVDDSGSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNK 876
             E  II  CVDDSG WG GG+F AL   SD     YE A + +DL LG++ L  ++D K
Sbjct: 815 -REDAIIVHCVDDSGHWGRGGLFTALGLRSDEPRKQYELAGDMKDLELGNVLLFPVDD-K 872

Query: 877 EQSDKAPQWVALGVVQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQ 916
           +       ++AL V Q  +   K+  S I L  L+  + K   AA Q  AS+H+PRIG+ 
Sbjct: 875 QSRLCGRDYLALIVAQQRDKANKL--SGIRLTALDEGLKKIYKAAKQKKASVHLPRIGH- 872

[Close]

BLAST of Cp4.1LG17g10540 vs. ExPASy Swiss-Prot
Match: Q9CXF7 (Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus OX=10090 GN=Chd1l PE=1 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.6e-124
Identity = 336/936 (35.90%), Postives = 478/936 (51.07%), Query Frame = 0


Query: 37  LKPYQVEGVLWLIRRYHLGVNAILGDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGW 96
           L+ YQ+EGV WL++ +H     ILGDE+                   C  I L I+  G 
Sbjct: 40  LRSYQLEGVNWLVQCFHCQNGCILGDEMGL--------------GKTCQTIALLIYLVG- 99

Query: 97  ALLMSNVDSHIANFYFLGLVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRI 156
                N +          LVLCPLSV   W  E+ RFAP L+ + Y GDKE R   ++ +
Sbjct: 100 ---RLNDEGPF-------LVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDL 159

Query: 157 FEHATSQSVTDVMLPFDVLLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVL 216
            + +           F VLLTTY+I L D  FL   +W    +DEA RLKN SS+L+  L
Sbjct: 160 RQES----------GFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTL 219

Query: 217 KERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVF--GTLDQFISTFKEAGDLTSGDPF 276
            E F    RLL+TGTPIQN+L EL++LL    P +F    ++ F+  +++          
Sbjct: 220 SE-FSAVFRLLLTGTPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQD---------- 279

Query: 277 SFYHNIFLQVLWDNACHGKIHGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEIT 336
                    +  ++    ++H          +L  FLLRR KA+++      LP  TE+ 
Sbjct: 280 ---------IEKESKSASELH---------RLLQPFLLRRVKAQVATE----LPKKTEVV 339

Query: 337 VMVPLVNLQRKVYMSILRKELPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPE 396
           V   +  LQ+K Y +IL K+L    A  + ++    LQN++ QLRK   HPYLF G+EPE
Sbjct: 340 VYHGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNILTQLRKCVDHPYLFDGVEPE 399

Query: 397 PYEEGEHLVQASGKLVILDQVLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLD 456
           P+E GEHL++ASGKL +LD++L  L+  GHRVLLF+QMTH LDILQD+++ R +SYER+D
Sbjct: 400 PFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVD 459

Query: 457 GSIRAEERFAAIRSFSLNCSGSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWN 516
           GS+R EER  AI++F               FVFL+STRAGGVG+NL +ADTVIF + D+N
Sbjct: 460 GSVRGEERHLAIKNFG----------NQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFN 519

Query: 517 PQVDKQALQRAHRIGQINHVLSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAE 576
           PQ D QA  RAHRIGQ   V  I L+   T+EE++ R+A  KLQL+  VI   +    A+
Sbjct: 520 PQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQ 579

Query: 577 EIAGNETGDLRSII-FGLH--IFDQGQ----------MDNEKSGEFEASNVSAMAEKVVA 636
           + +      L  I+ FGL   +  +G           +   K G++    + A A     
Sbjct: 580 KPSAEADFQLSEILKFGLDKLLSSEGSSMEDIDLKSILGETKDGQWTPDALPAAAAAGGG 639

Query: 637 VRHKKVSNKDDASFLVNTMTLSNGCDL---PIQEGTISVNFDPGVDEASYRSWIEKFKEA 696
               +  ++ ++    N M L  G D    P +E   S  F+  V+    ++ +EK    
Sbjct: 640 SLEPEEGSELESRSYENHMYLFEGRDYSKEPSKEDRKS--FEQLVN--LQKTLLEKTSHG 699

Query: 697 SQSGANQ--------------------IMELENRKTLSRDKSLK----LEDVKKKAEE-- 756
            ++  N+                      ELE+R+   ++ + K    +E+ +K+ EE  
Sbjct: 700 GRTLRNKGSVLIPGLAEGPIKRKKILSPEELEDRRKKRQEAAAKRKRLMEEKRKEKEEAE 759

Query: 757 --KKLAKWEALGYHS--LSVEDPIL-------PLDSDLI---SDSGSVHFVYGDCTHPSR 816
             KK+A WE+ GY S  LS ED  L          ++L     DS S+++V GD THP  
Sbjct: 760 HRKKMAWWESNGYQSFCLSSEDSELEDLEGGDESSAELAYEDLDSTSINYVSGDVTHPQA 819

Query: 817 NCISEPTIIFSCVDDSGSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLED 876
               E  +I  CVDDSG WG GG+F AL   S      YE A +  DL LGD+ L  ++D
Sbjct: 820 G--EEDAVIVHCVDDSGRWGRGGLFTALEVRSAEPRKIYELAGKMEDLSLGDVLLFPIDD 879

Query: 877 NKEQSDKAPQWVALGVVQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIG 915
            KE  DK    +AL VV  +  R  V  S I +  LE  + K   AA +  AS+H+PRIG
Sbjct: 880 -KESRDKGQDLLAL-VVAQHRDRTNV-LSGIKMAALEEGLKKIFLAAKKKKASVHLPRIG 883

[Close]

BLAST of Cp4.1LG17g10540 vs. ExPASy Swiss-Prot
Match: Q3B7N1 (Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus OX=9913 GN=CHD1L PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.2e-123
Identity = 328/923 (35.54%), Postives = 462/923 (50.05%), Query Frame = 0


Query: 37  LKPYQVEGVLWLIRRYHLGVNAILGDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGW 96
           L+PYQ++GV WL + +H     ILGDE+                   C  I L I+  G 
Sbjct: 48  LRPYQLQGVNWLAQCFHCQNGCILGDEMGL--------------GKTCQTIALFIYLAG- 107

Query: 97  ALLMSNVDSHIANFYFLGLVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRI 156
                N +          L+LCPLSV   W  E+ RFAP L+ + Y GDK+ R   ++ +
Sbjct: 108 ---RLNDEGPF-------LILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDL 167

Query: 157 FEHATSQSVTDVMLPFDVLLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVL 216
            + +           F VLLTTY+I L D  FL    W   V+DEA RLKN SS+L+  L
Sbjct: 168 KQESR----------FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTL 227

Query: 217 KERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFG--TLDQFISTFKEAGDLTSGDPF 276
            E F +   LL+TGTPIQN+L EL++LL F  P +F    ++ F+  +++          
Sbjct: 228 SE-FSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQD---------- 287

Query: 277 SFYHNIFLQVLWDNACHGKIHGNGQFKSLKY-ILSAFLLRRTKAKLSESGVLLLPPLTEI 336
                              I    +  S  Y +L  FLLRR KA+++      LP  TE+
Sbjct: 288 -------------------IEKESESASELYKLLQPFLLRRVKAEVATE----LPRKTEV 347

Query: 337 TVMVPLVNLQRKVYMSILRKELPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEP 396
            +   +  LQ+K Y +IL K+L    A  + ++    LQNV+ QLRK   HPYLF G+EP
Sbjct: 348 VIYHGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNVLSQLRKCVDHPYLFDGVEP 407

Query: 397 EPYEEGEHLVQASGKLVILDQVLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERL 456
           EP+E G+HL++ASGKL +LD++L  L+  GHRVLLF+QMT  LDILQD+L+ R +SYER+
Sbjct: 408 EPFEIGDHLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERV 467

Query: 457 DGSIRAEERFAAIRSFSLNCSGSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDW 516
           DGS+R EER  AI++F           +   F FL+STRAGGVG+NL +ADTVIF++ D+
Sbjct: 468 DGSVRGEERHLAIKNFG----------QQPIFTFLLSTRAGGVGMNLTAADTVIFFDSDF 527

Query: 517 NPQVDKQALQRAHRIGQINHVLSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEA 576
           NPQ D QA  RAHRIGQ   V  I L+   T+EE++ R+A  KLQL+  +I   +    A
Sbjct: 528 NPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEGGHFTLGA 587

Query: 577 EEIAGNETGDLRSII-FGL-----------HIFDQGQMDNEKSGEFEASNVSAMAEK--- 636
           ++ A +    L  I+ FGL           H  D   +  E       S+    AE+   
Sbjct: 588 QKPAADADLQLSEILKFGLDKLLSSEGSTMHEIDLKSILGETEDGHWVSDALPTAEEGSR 647

Query: 637 -----------VVAVRHKKVSNKDDASFLVNTMTLSNG-CDLPIQEGTISVNFD----PG 696
                           + K  +K+D       + L     +   QEG +  N      PG
Sbjct: 648 EPEEGKNHMYLFEGKDYSKEPSKEDRESFEQLVNLQKTLLEKTSQEGRLLRNKGSVPIPG 707

Query: 697 VDEAS-YRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEAL 756
           + E S  R  I   +E       +      RK L  +K  K E+ + K   KK+A WE+ 
Sbjct: 708 LVEGSTKRKRILSPEELEDRRKRRQEAAAKRKRLLEEKRKKKEEAEHK---KKMAWWESN 767

Query: 757 GYHSLSV-EDPILPLDSDLIS---------DSGSVHFVYGDCTHPSRNCISEPTIIFSCV 816
            Y S  +  +   P D +  S         DS S+ +V GD THP     +E  +I  CV
Sbjct: 768 NYQSFCLPSEESEPEDGEDESSAQLEYEDPDSTSIRYVSGDVTHPQAG--AEDAVIVHCV 827

Query: 817 DDSGSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVA 876
           DDSG WG GG+F AL   S      YE A + +DL LG + L  ++D KE  ++    +A
Sbjct: 828 DDSGRWGRGGLFTALETRSAEPRKRYELAGKMKDLSLGGVLLFPIDD-KESRNEGQDLLA 878

Query: 877 LGVVQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTV 915
           L +V  +  R  V  S I +  LE  + K   AA +  AS+H+PRIG+   +    WY  
Sbjct: 888 L-IVAQHRDRANV-LSGIKMAALEEALKKIFLAAKKRKASVHLPRIGH--ATKGFNWYGT 878

[Close]

BLAST of Cp4.1LG17g10540 vs. ExPASy Swiss-Prot
Match: Q86WJ1 (Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens OX=9606 GN=CHD1L PE=1 SV=3)

HSP 1 Score: 443.4 bits (1139), Expect = 6.4e-123
Identity = 331/923 (35.86%), Postives = 464/923 (50.27%), Query Frame = 0


Query: 37  LKPYQVEGVLWLIRRYHLGVNAILGDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGW 96
           L+ YQ+EGV WL +R+H     ILGDE+                   C  I L I+  G 
Sbjct: 46  LRSYQLEGVNWLAQRFHCQNGCILGDEMGL--------------GKTCQTIALFIYLAG- 105

Query: 97  ALLMSNVDSHIANFYFLGLVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRI 156
                N +          L+LCPLSV   W  E+ RFAP L+ + Y GDKE R   ++ +
Sbjct: 106 ---RLNDEGPF-------LILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL 165

Query: 157 FEHATSQSVTDVMLPFDVLLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVL 216
            + +           F VLLTTY+I L D  FL    W   V+DEA RLKN SS+L+  L
Sbjct: 166 KQESR----------FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTL 225

Query: 217 KERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSF 276
            E F +   LL+TGTPIQN+L EL++LL F  P +F          +E GD         
Sbjct: 226 SE-FSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSK--------EEVGD--------- 285

Query: 277 YHNIFLQVLWDNACHGKIHGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVM 336
               F+Q   D     +         L  +L  FLLRR KA+++      LP  TE+ + 
Sbjct: 286 ----FIQRYQDIEKESE-----SASELHKLLQPFLLRRVKAEVATE----LPKKTEVVIY 345

Query: 337 VPLVNLQRKVYMSILRKELPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPY 396
             +  LQ+K Y +IL K+L    A  + ++    LQN++ QLRK   HPYLF G+EPEP+
Sbjct: 346 HGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPF 405

Query: 397 EEGEHLVQASGKLVILDQVLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGS 456
           E G+HL +ASGKL +LD++L  L+  GHRVLLF+QMT  LDILQD+++ R +SYER+DGS
Sbjct: 406 EVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGS 465

Query: 457 IRAEERFAAIRSFSLNCSGSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQ 516
           +R EER  AI++F           +   FVFL+STRAGGVG+NL +ADTVIF + D+NPQ
Sbjct: 466 VRGEERHLAIKNFG----------QQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQ 525

Query: 517 VDKQALQRAHRIGQINHVLSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEI 576
            D QA  RAHRIGQ   V  I L+   T+EE++ R+A  KLQL+  +I   +    A++ 
Sbjct: 526 NDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKP 585

Query: 577 AGNETGDLRSII-FGLH--IFDQGQMDNE----------KSGEFEASNVSA----MAEKV 636
           A +    L  I+ FGL   +  +G   +E          K G++ +  + A      ++ 
Sbjct: 586 AADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWVSDALPAAEGGSRDQE 645

Query: 637 VAVRH----------KKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVN----FDPGVDE 696
               H          K+ S +D  SF           +   QEG    N      PG+ E
Sbjct: 646 EGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTLLEKASQEGRSLRNKGSVLIPGLVE 705

Query: 697 AS-YRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEALGYH 756
            S  R  +   +E       +      R+ L  +K  + E+ + K   KK+A WE+  Y 
Sbjct: 706 GSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHK---KKMAWWESNNYQ 765

Query: 757 SLSV-------------EDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCV 816
           S  +             E+    LD     D+ S+ +V GD THP     +E  +I  CV
Sbjct: 766 SFCLPSEESEPEDLENGEESSAELDYQ-DPDATSLKYVSGDVTHPQAG--AEDALIVHCV 825

Query: 817 DDSGSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVA 876
           DDSG WG GG+F AL K S      YE A + +DL LG + L  ++D KE  +K    +A
Sbjct: 826 DDSGHWGRGGLFTALEKRSAEPRKIYELAGKMKDLSLGGVLLFPVDD-KESRNKGQDLLA 878

Query: 877 LGVVQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTV 915
           L +V  +  R  V  S I +  LE  + K   AA +  AS+H+PRIG+   +    WY  
Sbjct: 886 L-IVAQHRDRSNV-LSGIKMAALEEGLKKIFLAAKKKKASVHLPRIGH--ATKGFNWYGT 878

[Close]

BLAST of Cp4.1LG17g10540 vs. NCBI nr
Match: XP_023515240.1 (probable helicase CHR10 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1639 bits (4243), Expect = 0.0
Identity = 852/915 (93.11%), Postives = 856/915 (93.55%), Query Frame = 0


Query: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60
           MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL
Sbjct: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60

Query: 61  GDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPL 120
           GDE+       +G  L  I     LK+                   I+   FL  VLCPL
Sbjct: 61  GDEM------GLGKTLQAISFLSYLKV-----------------HQISPGPFL--VLCPL 120

Query: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180
           SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD
Sbjct: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180

Query: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240
           IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL
Sbjct: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240

Query: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQF 300
           WALLHFCMPSVFGTLDQFISTFKEAGDLTSG                   HGKIHGNGQF
Sbjct: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSG-------------------HGKIHGNGQF 300

Query: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360
           KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA
Sbjct: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360

Query: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420
           LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH
Sbjct: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420

Query: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480
           ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT
Sbjct: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480

Query: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540
           RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV
Sbjct: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540

Query: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD 600
           TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD
Sbjct: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD 600

Query: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNFD 660
           NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNFD
Sbjct: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNFD 660

Query: 661 PGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEA 720
           PGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEA
Sbjct: 661 PGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEA 720

Query: 721 LGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSWGHG 780
           LGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSWGHG
Sbjct: 721 LGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSWGHG 780

Query: 781 GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP 840
           GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP
Sbjct: 781 GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP 840

Query: 841 RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 900
           RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS
Sbjct: 841 RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 871

Query: 901 IYSIKIHVYYYRRTS 915
           IYSIKIHVYYYRRTS
Sbjct: 901 IYSIKIHVYYYRRTS 871

[Close]

BLAST of Cp4.1LG17g10540 vs. NCBI nr
Match: XP_022959610.1 (probable helicase CHR10 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1602 bits (4149), Expect = 0.0
Identity = 833/915 (91.04%), Postives = 844/915 (92.24%), Query Frame = 0


Query: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60
           MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVN IL
Sbjct: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNVIL 60

Query: 61  GDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPL 120
           GDE+       +G  L  I     LK+                   I+   FL  VLCPL
Sbjct: 61  GDEM------GLGKTLQAISFLSYLKV-----------------HQISPGPFL--VLCPL 120

Query: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180
           SVTDGW SEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDV+ PFDVLLTTYD
Sbjct: 121 SVTDGWASEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVVFPFDVLLTTYD 180

Query: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240
           IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL
Sbjct: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240

Query: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQF 300
           WALLHFCMPSVFGTLDQFISTFKEAGDLTSG+                   GKIHGNGQF
Sbjct: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGN-------------------GKIHGNGQF 300

Query: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360
           KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA
Sbjct: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360

Query: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420
           LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH
Sbjct: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420

Query: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480
           ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT
Sbjct: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480

Query: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540
           RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV
Sbjct: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540

Query: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD 600
           TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEE EEIAGNETGDLRSIIFGL IFDQGQMD
Sbjct: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEETEEIAGNETGDLRSIIFGLRIFDQGQMD 600

Query: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNFD 660
           NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDL I+EGT SVNFD
Sbjct: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLSIREGTTSVNFD 660

Query: 661 PGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEA 720
           PG+DEASYRSW+EKFKEAS SGANQIMELENRK LSRDKSLKLE VKKKAEEKKLAKWEA
Sbjct: 661 PGLDEASYRSWVEKFKEASHSGANQIMELENRKALSRDKSLKLEAVKKKAEEKKLAKWEA 720

Query: 721 LGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSWGHG 780
           LGYHSLSVEDPILPLDSD ISDSGSVHFVYGDCTHPS NCISEPTIIFSCVDDSGSWGHG
Sbjct: 721 LGYHSLSVEDPILPLDSDPISDSGSVHFVYGDCTHPSLNCISEPTIIFSCVDDSGSWGHG 780

Query: 781 GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP 840
           GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNK++SDKAPQWVALGVVQSYNP
Sbjct: 781 GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKQESDKAPQWVALGVVQSYNP 840

Query: 841 RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 900
           RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS
Sbjct: 841 RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 871

Query: 901 IYSIKIHVYYYRRTS 915
           IYSIKIHVYYYRRTS
Sbjct: 901 IYSIKIHVYYYRRTS 871

[Close]

BLAST of Cp4.1LG17g10540 vs. NCBI nr
Match: XP_023004934.1 (probable helicase CHR10 isoform X1 [Cucurbita maxima] >XP_023004935.1 probable helicase CHR10 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1589 bits (4115), Expect = 0.0
Identity = 825/915 (90.16%), Postives = 842/915 (92.02%), Query Frame = 0


Query: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60
           MNYERRLKAAAKLILLHDS SDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVN IL
Sbjct: 1   MNYERRLKAAAKLILLHDSGSDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNVIL 60

Query: 61  GDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPL 120
           GDE+       +G  L  I     LK+                   I+   FL  VLCPL
Sbjct: 61  GDEM------GLGKTLQAISFLSYLKV-----------------HPISPGPFL--VLCPL 120

Query: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180
           SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVM PFDVLLTTYD
Sbjct: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMFPFDVLLTTYD 180

Query: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240
           IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL
Sbjct: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240

Query: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQF 300
           WALLHFCMPSVFGTLDQFISTFK+AGDLTSG+                   GKIHGNGQF
Sbjct: 241 WALLHFCMPSVFGTLDQFISTFKQAGDLTSGN-------------------GKIHGNGQF 300

Query: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360
           KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA
Sbjct: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360

Query: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420
           LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH
Sbjct: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420

Query: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480
           ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT
Sbjct: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480

Query: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540
           RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV
Sbjct: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540

Query: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD 600
           TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD
Sbjct: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD 600

Query: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNFD 660
           NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDD+SFLVNTMTLSNGCDL I+EGT SVNFD
Sbjct: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDSSFLVNTMTLSNGCDLSIREGTTSVNFD 660

Query: 661 PGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEA 720
           PG+DE SYRSW+EKFKEAS SGANQIMELEN+K LSRDKSLKLE V+KKAEEKKLAKWEA
Sbjct: 661 PGLDEGSYRSWVEKFKEASDSGANQIMELENQKALSRDKSLKLEAVQKKAEEKKLAKWEA 720

Query: 721 LGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSWGHG 780
            GYHSLSVEDPILPLDSD ISDSGSVHFVYGDCTHPS NCISEPTIIFSCVD+SGSWGHG
Sbjct: 721 FGYHSLSVEDPILPLDSDPISDSGSVHFVYGDCTHPSLNCISEPTIIFSCVDNSGSWGHG 780

Query: 781 GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP 840
           GMFDALAKLS+SIP+AYERASEF DLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP
Sbjct: 781 GMFDALAKLSESIPAAYERASEFGDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP 840

Query: 841 RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 900
           RRK+PRSKISLPDL+NCILKAS AASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS
Sbjct: 841 RRKIPRSKISLPDLDNCILKASFAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 871

Query: 901 IYSIKIHVYYYRRTS 915
           IYSIKIHVYYYRRTS
Sbjct: 901 IYSIKIHVYYYRRTS 871

[Close]

BLAST of Cp4.1LG17g10540 vs. NCBI nr
Match: KAG7025346.1 (putative helicase CHR10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1542 bits (3992), Expect = 0.0
Identity = 803/907 (88.53%), Postives = 812/907 (89.53%), Query Frame = 0


Query: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60
           MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVN IL
Sbjct: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNVIL 60

Query: 61  GDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPL 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180
              DGW SEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDV+ PFDVLLTTYD
Sbjct: 121 ---DGWASEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVVFPFDVLLTTYD 180

Query: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240
           IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYN L+ERFLIPRRLLMTGTPIQNNLSEL
Sbjct: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNELEERFLIPRRLLMTGTPIQNNLSEL 240

Query: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQF 300
           WALLHFCMPSVFGTLDQFISTFKEAGDLTSG+                   GKIHGNGQF
Sbjct: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGN-------------------GKIHGNGQF 300

Query: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360
           KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA
Sbjct: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360

Query: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420
           LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH
Sbjct: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420

Query: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480
           ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT
Sbjct: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480

Query: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540
           RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV
Sbjct: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540

Query: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD 600
           TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEE EEIAGNETGDLRSIIFGL IFDQGQMD
Sbjct: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEETEEIAGNETGDLRSIIFGLRIFDQGQMD 600

Query: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNFD 660
           NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDL I+EGT SVNFD
Sbjct: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLSIREGTTSVNFD 660

Query: 661 PGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEA 720
           PG+DEASYRSW+EKFKEAS SGANQIMELENRK LSRDKSLKLE VKKKAEEKKLAKWEA
Sbjct: 661 PGLDEASYRSWVEKFKEASHSGANQIMELENRKALSRDKSLKLEAVKKKAEEKKLAKWEA 720

Query: 721 LGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSWGHG 780
           LGYHSLSVEDPILPLDSD ISDSGSVHFVYGDCTHPS NCISEPTIIFSCVD+SGSWGHG
Sbjct: 721 LGYHSLSVEDPILPLDSDPISDSGSVHFVYGDCTHPSLNCISEPTIIFSCVDNSGSWGHG 780

Query: 781 GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP 840
           GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNK++SDKAPQWVALGVVQSYNP
Sbjct: 781 GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKQESDKAPQWVALGVVQSYNP 825

Query: 841 RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 900
           RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS
Sbjct: 841 RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 825

Query: 901 IYSIKIH 907
           IYSIKIH
Sbjct: 901 IYSIKIH 825

[Close]

BLAST of Cp4.1LG17g10540 vs. NCBI nr
Match: XP_023515243.1 (probable helicase CHR10 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1524 bits (3946), Expect = 0.0
Identity = 782/801 (97.63%), Postives = 782/801 (97.63%), Query Frame = 0


Query: 115 LVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDV 174
           LVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDV
Sbjct: 40  LVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDV 99

Query: 175 LLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQ 234
           LLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQ
Sbjct: 100 LLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQ 159

Query: 235 NNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKI 294
           NNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSG                   HGKI
Sbjct: 160 NNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSG-------------------HGKI 219

Query: 295 HGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKE 354
           HGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKE
Sbjct: 220 HGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKE 279

Query: 355 LPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQ 414
           LPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQ
Sbjct: 280 LPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQ 339

Query: 415 VLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCS 474
           VLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCS
Sbjct: 340 VLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCS 399

Query: 475 GSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHV 534
           GSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHV
Sbjct: 400 GSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHV 459

Query: 535 LSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIF 594
           LSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIF
Sbjct: 460 LSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIF 519

Query: 595 DQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGT 654
           DQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGT
Sbjct: 520 DQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGT 579

Query: 655 ISVNFDPGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKK 714
           ISVNFDPGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKK
Sbjct: 580 ISVNFDPGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKK 639

Query: 715 LAKWEALGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDS 774
           LAKWEALGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDS
Sbjct: 640 LAKWEALGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDS 699

Query: 775 GSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGV 834
           GSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGV
Sbjct: 700 GSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGV 759

Query: 835 VQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERL 894
           VQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERL
Sbjct: 760 VQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERL 819

Query: 895 LRKYASIYSIKIHVYYYRRTS 915
           LRKYASIYSIKIHVYYYRRTS
Sbjct: 820 LRKYASIYSIKIHVYYYRRTS 821

[Close]

BLAST of Cp4.1LG17g10540 vs. ExPASy TrEMBL
Match: A0A6J1H6S3 (probable helicase CHR10 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460635 PE=4 SV=1)

HSP 1 Score: 1602 bits (4149), Expect = 0.0
Identity = 833/915 (91.04%), Postives = 844/915 (92.24%), Query Frame = 0


Query: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60
           MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVN IL
Sbjct: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNVIL 60

Query: 61  GDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPL 120
           GDE+       +G  L  I     LK+                   I+   FL  VLCPL
Sbjct: 61  GDEM------GLGKTLQAISFLSYLKV-----------------HQISPGPFL--VLCPL 120

Query: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180
           SVTDGW SEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDV+ PFDVLLTTYD
Sbjct: 121 SVTDGWASEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVVFPFDVLLTTYD 180

Query: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240
           IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL
Sbjct: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240

Query: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQF 300
           WALLHFCMPSVFGTLDQFISTFKEAGDLTSG+                   GKIHGNGQF
Sbjct: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGN-------------------GKIHGNGQF 300

Query: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360
           KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA
Sbjct: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360

Query: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420
           LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH
Sbjct: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420

Query: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480
           ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT
Sbjct: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480

Query: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540
           RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV
Sbjct: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540

Query: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD 600
           TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEE EEIAGNETGDLRSIIFGL IFDQGQMD
Sbjct: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEETEEIAGNETGDLRSIIFGLRIFDQGQMD 600

Query: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNFD 660
           NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDL I+EGT SVNFD
Sbjct: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLSIREGTTSVNFD 660

Query: 661 PGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEA 720
           PG+DEASYRSW+EKFKEAS SGANQIMELENRK LSRDKSLKLE VKKKAEEKKLAKWEA
Sbjct: 661 PGLDEASYRSWVEKFKEASHSGANQIMELENRKALSRDKSLKLEAVKKKAEEKKLAKWEA 720

Query: 721 LGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSWGHG 780
           LGYHSLSVEDPILPLDSD ISDSGSVHFVYGDCTHPS NCISEPTIIFSCVDDSGSWGHG
Sbjct: 721 LGYHSLSVEDPILPLDSDPISDSGSVHFVYGDCTHPSLNCISEPTIIFSCVDDSGSWGHG 780

Query: 781 GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP 840
           GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNK++SDKAPQWVALGVVQSYNP
Sbjct: 781 GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKQESDKAPQWVALGVVQSYNP 840

Query: 841 RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 900
           RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS
Sbjct: 841 RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 871

Query: 901 IYSIKIHVYYYRRTS 915
           IYSIKIHVYYYRRTS
Sbjct: 901 IYSIKIHVYYYRRTS 871

[Close]

BLAST of Cp4.1LG17g10540 vs. ExPASy TrEMBL
Match: A0A6J1KW01 (probable helicase CHR10 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498093 PE=4 SV=1)

HSP 1 Score: 1589 bits (4115), Expect = 0.0
Identity = 825/915 (90.16%), Postives = 842/915 (92.02%), Query Frame = 0


Query: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60
           MNYERRLKAAAKLILLHDS SDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVN IL
Sbjct: 1   MNYERRLKAAAKLILLHDSGSDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNVIL 60

Query: 61  GDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPL 120
           GDE+       +G  L  I     LK+                   I+   FL  VLCPL
Sbjct: 61  GDEM------GLGKTLQAISFLSYLKV-----------------HPISPGPFL--VLCPL 120

Query: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180
           SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVM PFDVLLTTYD
Sbjct: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMFPFDVLLTTYD 180

Query: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240
           IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL
Sbjct: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240

Query: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQF 300
           WALLHFCMPSVFGTLDQFISTFK+AGDLTSG+                   GKIHGNGQF
Sbjct: 241 WALLHFCMPSVFGTLDQFISTFKQAGDLTSGN-------------------GKIHGNGQF 300

Query: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360
           KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA
Sbjct: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360

Query: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420
           LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH
Sbjct: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420

Query: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480
           ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT
Sbjct: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480

Query: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540
           RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV
Sbjct: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540

Query: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD 600
           TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD
Sbjct: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD 600

Query: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNFD 660
           NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDD+SFLVNTMTLSNGCDL I+EGT SVNFD
Sbjct: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDSSFLVNTMTLSNGCDLSIREGTTSVNFD 660

Query: 661 PGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWEA 720
           PG+DE SYRSW+EKFKEAS SGANQIMELEN+K LSRDKSLKLE V+KKAEEKKLAKWEA
Sbjct: 661 PGLDEGSYRSWVEKFKEASDSGANQIMELENQKALSRDKSLKLEAVQKKAEEKKLAKWEA 720

Query: 721 LGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSWGHG 780
            GYHSLSVEDPILPLDSD ISDSGSVHFVYGDCTHPS NCISEPTIIFSCVD+SGSWGHG
Sbjct: 721 FGYHSLSVEDPILPLDSDPISDSGSVHFVYGDCTHPSLNCISEPTIIFSCVDNSGSWGHG 780

Query: 781 GMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP 840
           GMFDALAKLS+SIP+AYERASEF DLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP
Sbjct: 781 GMFDALAKLSESIPAAYERASEFGDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQSYNP 840

Query: 841 RRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 900
           RRK+PRSKISLPDL+NCILKAS AASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS
Sbjct: 841 RRKIPRSKISLPDLDNCILKASFAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRKYAS 871

Query: 901 IYSIKIHVYYYRRTS 915
           IYSIKIHVYYYRRTS
Sbjct: 901 IYSIKIHVYYYRRTS 871

[Close]

BLAST of Cp4.1LG17g10540 vs. ExPASy TrEMBL
Match: A0A6J1H5C0 (probable helicase CHR10 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460635 PE=4 SV=1)

HSP 1 Score: 1489 bits (3856), Expect = 0.0
Identity = 764/801 (95.38%), Postives = 771/801 (96.25%), Query Frame = 0


Query: 115 LVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDV 174
           LVLCPLSVTDGW SEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDV+ PFDV
Sbjct: 27  LVLCPLSVTDGWASEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVVFPFDV 86

Query: 175 LLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQ 234
           LLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQ
Sbjct: 87  LLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQ 146

Query: 235 NNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKI 294
           NNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSG+                   GKI
Sbjct: 147 NNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSGN-------------------GKI 206

Query: 295 HGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKE 354
           HGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKE
Sbjct: 207 HGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKE 266

Query: 355 LPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQ 414
           LPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQ
Sbjct: 267 LPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQ 326

Query: 415 VLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCS 474
           VLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCS
Sbjct: 327 VLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCS 386

Query: 475 GSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHV 534
           GSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHV
Sbjct: 387 GSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHV 446

Query: 535 LSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIF 594
           LSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEE EEIAGNETGDLRSIIFGL IF
Sbjct: 447 LSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEETEEIAGNETGDLRSIIFGLRIF 506

Query: 595 DQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGT 654
           DQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDL I+EGT
Sbjct: 507 DQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLSIREGT 566

Query: 655 ISVNFDPGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKK 714
            SVNFDPG+DEASYRSW+EKFKEAS SGANQIMELENRK LSRDKSLKLE VKKKAEEKK
Sbjct: 567 TSVNFDPGLDEASYRSWVEKFKEASHSGANQIMELENRKALSRDKSLKLEAVKKKAEEKK 626

Query: 715 LAKWEALGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDS 774
           LAKWEALGYHSLSVEDPILPLDSD ISDSGSVHFVYGDCTHPS NCISEPTIIFSCVDDS
Sbjct: 627 LAKWEALGYHSLSVEDPILPLDSDPISDSGSVHFVYGDCTHPSLNCISEPTIIFSCVDDS 686

Query: 775 GSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGV 834
           GSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNK++SDKAPQWVALGV
Sbjct: 687 GSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKQESDKAPQWVALGV 746

Query: 835 VQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERL 894
           VQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERL
Sbjct: 747 VQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERL 806

Query: 895 LRKYASIYSIKIHVYYYRRTS 915
           LRKYASIYSIKIHVYYYRRTS
Sbjct: 807 LRKYASIYSIKIHVYYYRRTS 808

[Close]

BLAST of Cp4.1LG17g10540 vs. ExPASy TrEMBL
Match: A0A6J1KTI8 (probable helicase CHR10 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498093 PE=4 SV=1)

HSP 1 Score: 1480 bits (3831), Expect = 0.0
Identity = 757/801 (94.51%), Postives = 770/801 (96.13%), Query Frame = 0


Query: 115 LVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDV 174
           LVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVM PFDV
Sbjct: 27  LVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMFPFDV 86

Query: 175 LLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQ 234
           LLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQ
Sbjct: 87  LLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQ 146

Query: 235 NNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKI 294
           NNLSELWALLHFCMPSVFGTLDQFISTFK+AGDLTSG+                   GKI
Sbjct: 147 NNLSELWALLHFCMPSVFGTLDQFISTFKQAGDLTSGN-------------------GKI 206

Query: 295 HGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKE 354
           HGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKE
Sbjct: 207 HGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKE 266

Query: 355 LPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQ 414
           LPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQ
Sbjct: 267 LPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQ 326

Query: 415 VLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCS 474
           VLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCS
Sbjct: 327 VLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCS 386

Query: 475 GSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHV 534
           GSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHV
Sbjct: 387 GSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHV 446

Query: 535 LSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIF 594
           LSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIF
Sbjct: 447 LSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIF 506

Query: 595 DQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGT 654
           DQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDD+SFLVNTMTLSNGCDL I+EGT
Sbjct: 507 DQGQMDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDSSFLVNTMTLSNGCDLSIREGT 566

Query: 655 ISVNFDPGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKK 714
            SVNFDPG+DE SYRSW+EKFKEAS SGANQIMELEN+K LSRDKSLKLE V+KKAEEKK
Sbjct: 567 TSVNFDPGLDEGSYRSWVEKFKEASDSGANQIMELENQKALSRDKSLKLEAVQKKAEEKK 626

Query: 715 LAKWEALGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDS 774
           LAKWEA GYHSLSVEDPILPLDSD ISDSGSVHFVYGDCTHPS NCISEPTIIFSCVD+S
Sbjct: 627 LAKWEAFGYHSLSVEDPILPLDSDPISDSGSVHFVYGDCTHPSLNCISEPTIIFSCVDNS 686

Query: 775 GSWGHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGV 834
           GSWGHGGMFDALAKLS+SIP+AYERASEF DLHLGDLHLIKLEDNKEQSDKAPQWVALGV
Sbjct: 687 GSWGHGGMFDALAKLSESIPAAYERASEFGDLHLGDLHLIKLEDNKEQSDKAPQWVALGV 746

Query: 835 VQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERL 894
           VQSYNPRRK+PRSKISLPDL+NCILKAS AASQHSASIHMPRIGYQDGSDRSEWYTVERL
Sbjct: 747 VQSYNPRRKIPRSKISLPDLDNCILKASFAASQHSASIHMPRIGYQDGSDRSEWYTVERL 806

Query: 895 LRKYASIYSIKIHVYYYRRTS 915
           LRKYASIYSIKIHVYYYRRTS
Sbjct: 807 LRKYASIYSIKIHVYYYRRTS 808

[Close]

BLAST of Cp4.1LG17g10540 vs. ExPASy TrEMBL
Match: A0A1S3CAH8 (probable helicase CHR10 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498814 PE=4 SV=1)

HSP 1 Score: 1443 bits (3736), Expect = 0.0
Identity = 744/918 (81.05%), Postives = 803/918 (87.47%), Query Frame = 0


Query: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60
           MNYERRLKAAAKLILLHDS SDNS  S  D GVTATLKPYQ++GV WLIRRYHLGVN IL
Sbjct: 1   MNYERRLKAAAKLILLHDSGSDNSSVSSSDFGVTATLKPYQIDGVQWLIRRYHLGVNVIL 60

Query: 61  GDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPL 120
           GDE+       +G  L  I     LK+                   I+   FL  VLCPL
Sbjct: 61  GDEM------GLGKTLQAISFLSYLKV-----------------HQISPTPFL--VLCPL 120

Query: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180
           SVTDGWVSEIV+FAP L VLQYVGDKETRRN+RRR+FEHAT Q V+DV+ PFD+LLTTYD
Sbjct: 121 SVTDGWVSEIVKFAPCLKVLQYVGDKETRRNARRRMFEHATEQPVSDVLFPFDILLTTYD 180

Query: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240
           IAL+DQDFLSQI WQ AVIDEAQRLKNPSSVLYNVL ERFLIPRRLLMTGTPIQNNLSEL
Sbjct: 181 IALMDQDFLSQIPWQCAVIDEAQRLKNPSSVLYNVLLERFLIPRRLLMTGTPIQNNLSEL 240

Query: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQF 300
           WALLHFCMPSVFGTLDQFISTFK++GDL  G                   HGKI+G+  F
Sbjct: 241 WALLHFCMPSVFGTLDQFISTFKDSGDLILG-------------------HGKINGHEHF 300

Query: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360
           KSLKY+LS FLLRRTKAKLSESGVLLLPPLTE TVMVPLVNLQRKVYMS+LRKELPKLLA
Sbjct: 301 KSLKYVLSVFLLRRTKAKLSESGVLLLPPLTETTVMVPLVNLQRKVYMSLLRKELPKLLA 360

Query: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420
           +S+GSSN QSLQN+V+QLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLV+LDQ+LQKLH
Sbjct: 361 VSAGSSNQQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVVLDQLLQKLH 420

Query: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLN-CSGSSQT 480
           ES HRVLLFAQMTHTLDILQDFLELR+FSYERLDGSIRAEERFAAIRSFS N   GSSQ 
Sbjct: 421 ESRHRVLLFAQMTHTLDILQDFLELRSFSYERLDGSIRAEERFAAIRSFSSNNAGGSSQN 480

Query: 481 TRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINL 540
           T NDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINL
Sbjct: 481 TCNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINL 540

Query: 541 VTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQM 600
           VT+QT+EEVIMRRAERKLQLS+ V+GEDYID++AE+I  NET DLRSIIFGLH+FDQGQ+
Sbjct: 541 VTSQTVEEVIMRRAERKLQLSQKVVGEDYIDQDAEDIVVNETSDLRSIIFGLHVFDQGQV 600

Query: 601 DNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNF 660
           DNEKSGEFE SNVSAMAEKV+A+RHKK+SNKDD  FL+N  T SNGCD+ I EGT S+NF
Sbjct: 601 DNEKSGEFEVSNVSAMAEKVIALRHKKLSNKDDTRFLINPTTFSNGCDISIYEGTTSLNF 660

Query: 661 DPGVDEASYRSWIEKFKEASQSGANQIMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWE 720
           DPG+DE SYRSWIEKFKEA+ SGANQIMELE+RKTLSRDKSLKL+  KKKAEEKKL+KWE
Sbjct: 661 DPGLDEVSYRSWIEKFKEATPSGANQIMELEDRKTLSRDKSLKLQAAKKKAEEKKLSKWE 720

Query: 721 ALGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSR--NCISEPTIIFSCVDDSGSW 780
           ALGYHSLSVEDPILP D DLISD+GSV+FVYGDCTHPS   NCISEPTIIFSCVDDSGSW
Sbjct: 721 ALGYHSLSVEDPILPNDGDLISDAGSVYFVYGDCTHPSATVNCISEPTIIFSCVDDSGSW 780

Query: 781 GHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSDKAPQWVALGVVQS 840
           GHGGMFDALAKLS+S+PSAYERASEF DLHLGDLHLI+L+DNK+QSD APQWVAL VVQS
Sbjct: 781 GHGGMFDALAKLSESVPSAYERASEFGDLHLGDLHLIQLDDNKQQSDNAPQWVALAVVQS 840

Query: 841 YNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLRK 900
           YNPRRKVPRSKISLPDLENCI KASS+A+QHSASIHMPRIGYQDGSDRSEWYTVERLLRK
Sbjct: 841 YNPRRKVPRSKISLPDLENCISKASSSAAQHSASIHMPRIGYQDGSDRSEWYTVERLLRK 874

Query: 901 YASIYSIKIHVYYYRRTS 915
           YASIY++K++VYYYRRTS
Sbjct: 901 YASIYNVKVYVYYYRRTS 874

[Close]

BLAST of Cp4.1LG17g10540 vs. TAIR 10
Match: AT2G44980.2 (SNF2 domain-containing protein / helicase domain-containing protein )

HSP 1 Score: 1076.2 bits (2782), Expect = 0.0e+00
Identity = 575/920 (62.50%), Postives = 700/920 (76.09%), Query Frame = 0


Query: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60
           M YERRL+AAA++IL  +++  N+P  C + GVTATLKP+QVEGV WLI++Y LGVN +L
Sbjct: 15  MEYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVL 74

Query: 61  GDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPL 120
                 L    +G  L  I     LK                +           LVLCPL
Sbjct: 75  E-----LDQMGLGKTLQAISFLSYLK------------FRQGLPGPF-------LVLCPL 134

Query: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180
           SVTDGWVSEI RF P+L VL+YVGDK  R + R+ +++H   +S     LPFDVLLTTYD
Sbjct: 135 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDH-VKKSSKGHFLPFDVLLTTYD 194

Query: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240
           IAL+DQDFLSQI WQYA+IDEAQRLKNP+SVLYNVL E+FLIPRRLL+TGTPIQNNL+EL
Sbjct: 195 IALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTEL 254

Query: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQF 300
           WAL+HFCMP VFGTLDQF+S FKE GD  SG   S                   +    +
Sbjct: 255 WALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVS-------------------NDKETY 314

Query: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360
           KSLK+IL AF+LRRTK+ L ESG L+LPPLTE+TVMVPLV+LQ+K+Y SILRKELP LL 
Sbjct: 315 KSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLE 374

Query: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420
           LSSG SNH SLQN+V+QLRKACSHPYLFPGIEPEP+EEGEHLVQASGKL++LDQ+L++LH
Sbjct: 375 LSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKLLVLDQLLKRLH 434

Query: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSG--SSQ 480
           +SGHRVLLF+QMT TLDILQDF+ELR +SYERLDGS+RAEERFAAI++FS        S+
Sbjct: 435 DSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSE 494

Query: 481 TTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSIN 540
              ++AFVF+ISTRAGGVGLNLV+ADTVIFYEQDWNPQVDKQALQRAHRIGQI+HVLSIN
Sbjct: 495 VDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSIN 554

Query: 541 LVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQ 600
           LVT  ++EEVI+RRAERKLQLS NV+G++   EE EE    + GDLRS++FGL  FD  +
Sbjct: 555 LVTEHSVEEVILRRAERKLQLSHNVVGDNM--EEKEE----DGGDLRSLVFGLQRFDPEE 614

Query: 601 MDNEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVN 660
           + NE+S   +   +S++AEKVVA+R     +K++  F +N+     G        T S +
Sbjct: 615 IHNEESDNLKMVEISSLAEKVVAIRQNVEPDKEERRFEINSSDTLLG-------NTSSAS 674

Query: 661 FDPGVDEASYRSWIEKFKEASQSGANQ-IMELENRKTLSRDKSLKLEDVKKKAEEKKLAK 720
            D  +DEASY SW+EK KEA++S  ++ I+EL NRK LS +++L++E  +KKAEEKKLA 
Sbjct: 675 LDSELDEASYLSWVEKLKEAARSSKDEKIIELGNRKNLSEERNLRIEAARKKAEEKKLAT 734

Query: 721 WEALGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSW 780
           W A GY SLSVE+PILP D D  SD+GSV+FV+GDCT+PS     EP IIFSCVDDSG+W
Sbjct: 735 WGAHGYQSLSVEEPILPDDVDSSSDAGSVNFVFGDCTNPS-TVSHEPAIIFSCVDDSGNW 794

Query: 781 GHGGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSD---KAPQWVALGV 840
           G GGMFDAL+KLS+++P+AY RASEF+DLHLGDLHLIK++DN +Q +     P WVA+ V
Sbjct: 795 GRGGMFDALSKLSNTVPTAYHRASEFKDLHLGDLHLIKIDDNDDQQNTQASKPLWVAVAV 854

Query: 841 VQSYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERL 900
            QSYN RRKVPRS IS+PDLE+C+ KAS +ASQ SAS+HMPRIGYQDGSDRS+WYTVERL
Sbjct: 855 TQSYNSRRKVPRSSISIPDLESCLAKASFSASQKSASLHMPRIGYQDGSDRSQWYTVERL 876

Query: 901 LRKYASIYSIKIHVYYYRRT 915
           LRKY+SI+++KI VYYYRR+
Sbjct: 915 LRKYSSIFTVKIFVYYYRRS 876

[Close]

BLAST of Cp4.1LG17g10540 vs. TAIR 10
Match: AT2G44980.1 (SNF2 domain-containing protein / helicase domain-containing protein )

HSP 1 Score: 1058.9 bits (2737), Expect = 2.3e-309
Identity = 569/912 (62.39%), Postives = 691/912 (75.77%), Query Frame = 0


Query: 1   MNYERRLKAAAKLILLHDSESDNSPKSCPDVGVTATLKPYQVEGVLWLIRRYHLGVNAIL 60
           M YERRL+AAA++IL  +++  N+P  C + GVTATLKP+QVEGV WLI++Y LGVN +L
Sbjct: 15  MEYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVL 74

Query: 61  GDEVWFLYHHDVGVRLHYIQCTLCLKIILEIWDCGWALLMSNVDSHIANFYFLGLVLCPL 120
                 L    +G  L  I     LK                +           LVLCPL
Sbjct: 75  E-----LDQMGLGKTLQAISFLSYLK------------FRQGLPGPF-------LVLCPL 134

Query: 121 SVTDGWVSEIVRFAPHLNVLQYVGDKETRRNSRRRIFEHATSQSVTDVMLPFDVLLTTYD 180
           SVTDGWVSEI RF P+L VL+YVGDK  R + R+ +++H          LPFDVLLTTYD
Sbjct: 135 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGH-------FLPFDVLLTTYD 194

Query: 181 IALIDQDFLSQIAWQYAVIDEAQRLKNPSSVLYNVLKERFLIPRRLLMTGTPIQNNLSEL 240
           IAL+DQDFLSQI WQYA+IDEAQRLKNP+SVLYNVL E+FLIPRRLL+TGTPIQNNL+EL
Sbjct: 195 IALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTEL 254

Query: 241 WALLHFCMPSVFGTLDQFISTFKEAGDLTSGDPFSFYHNIFLQVLWDNACHGKIHGNGQF 300
           WAL+HFCMP VFGTLDQF+S FKE GD              L V  D            +
Sbjct: 255 WALMHFCMPLVFGTLDQFLSAFKETGD-------------GLDVSNDKE---------TY 314

Query: 301 KSLKYILSAFLLRRTKAKLSESGVLLLPPLTEITVMVPLVNLQRKVYMSILRKELPKLLA 360
           KSLK+IL AF+LRRTK+ L ESG L+LPPLTE+TVMVPLV+LQ+K+Y SILRKELP LL 
Sbjct: 315 KSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLE 374

Query: 361 LSSGSSNHQSLQNVVMQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLVILDQVLQKLH 420
           LSSG SNH SLQN+V+QLRKACSHPYLFPGIEPEP+EEGEHLVQASGKL++LDQ+L++LH
Sbjct: 375 LSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKLLVLDQLLKRLH 434

Query: 421 ESGHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEERFAAIRSFSLNCSGSSQTT 480
           +SGHRVLLF+QMT TLDILQDF+ELR +SYERLDGS+RAEERFAAI++FS++ S      
Sbjct: 435 DSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSVDGS------ 494

Query: 481 RNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQRAHRIGQINHVLSINLV 540
             +AFVF+ISTRAGGVGLNLV+ADTVIFYEQDWNPQVDKQALQRAHRIGQI+HVLSINLV
Sbjct: 495 --NAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLV 554

Query: 541 TAQTIEEVIMRRAERKLQLSKNVIGEDYIDEEAEEIAGNETGDLRSIIFGLHIFDQGQMD 600
           T  ++EEVI+RRAERKLQLS NV+G++   EE EE    + GDLRS++FGL  FD  ++ 
Sbjct: 555 TEHSVEEVILRRAERKLQLSHNVVGDNM--EEKEE----DGGDLRSLVFGLQRFDPEEIH 614

Query: 601 NEKSGEFEASNVSAMAEKVVAVRHKKVSNKDDASFLVNTMTLSNGCDLPIQEGTISVNFD 660
           NE+S   +   +S++AEKVVA+R     +K++  F +N+     G        T S + D
Sbjct: 615 NEESDNLKMVEISSLAEKVVAIRQNVEPDKEERRFEINSSDTLLG-------NTSSASLD 674

Query: 661 PGVDEASYRSWIEKFKEASQSGANQ-IMELENRKTLSRDKSLKLEDVKKKAEEKKLAKWE 720
             +DEASY SW+EK KEA++S  ++ I+EL NRK LS +++L++E  +KKAEEKKLA W 
Sbjct: 675 SELDEASYLSWVEKLKEAARSSKDEKIIELGNRKNLSEERNLRIEAARKKAEEKKLATWG 734

Query: 721 ALGYHSLSVEDPILPLDSDLISDSGSVHFVYGDCTHPSRNCISEPTIIFSCVDDSGSWGH 780
           A GY SLSVE+PILP D D  SD+GSV+FV+GDCT+PS     EP IIFSCVDDSG+WG 
Sbjct: 735 AHGYQSLSVEEPILPDDVDSSSDAGSVNFVFGDCTNPS-TVSHEPAIIFSCVDDSGNWGR 794

Query: 781 GGMFDALAKLSDSIPSAYERASEFRDLHLGDLHLIKLEDNKEQSD---KAPQWVALGVVQ 840
           GGMFDAL+KLS+++P+AY RASEF+DLHLGDLHLIK++DN +Q +     P WVA+ V Q
Sbjct: 795 GGMFDALSKLSNTVPTAYHRASEFKDLHLGDLHLIKIDDNDDQQNTQASKPLWVAVAVTQ 851

Query: 841 SYNPRRKVPRSKISLPDLENCILKASSAASQHSASIHMPRIGYQDGSDRSEWYTVERLLR 900
           SYN RRKVPRS IS+PDLE+C+ KAS +ASQ SAS+HMPRIGYQDGSDRS+WYTVERLLR
Sbjct: 855 SYNSRRKVPRSSISIPDLESCLAKASFSASQKSASLHMPRIGYQDGSDRSQWYTVERLLR 851

Query: 901 KYASIYSIKIHV 909
           KY+SI+++KI V
Sbjct: 915 KYSSIFTVKIFV 851

[Close]

BLAST of Cp4.1LG17g10540 vs. TAIR 10
Match: AT5G18620.1 (chromatin remodeling factor17 )

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-85
Identity = 196/541 (36.23%), Postives = 290/541 (53.60%), Query Frame = 0


Query: 33  VTATLKPYQVEGVLWLIRRYHLGVNAILGDEVWFLYHHDVGVRLHYIQCTLCLKIILEIW 92
           +   L+ YQ+ G+ WLIR Y  G+N IL DE+       +G  L  I     L       
Sbjct: 190 IQGKLRDYQLAGLNWLIRLYENGINGILADEM------GLGKTLQTISLLAYL------- 249

Query: 93  DCGWALLMSNVDSHIANFYFLGLVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNS 152
                                 +V+ P S    W++EI RF P L  ++++G+ E RR+ 
Sbjct: 250 ------------HEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHI 309

Query: 153 RRRIFEHATSQSVTDVMLPFDVLLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVL 212
           R  +           V   FD+ +T++++A+ ++  L + +W+Y +IDEA R+KN +S+L
Sbjct: 310 REELL----------VAGKFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLL 369

Query: 213 YNVLKERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSGD 272
              ++  F    RLL+TGTP+QNNL ELWALL+F +P VF + + F   F+ +G+    +
Sbjct: 370 SKTMR-LFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQE 429

Query: 273 PFSFYHNIFLQVLWDNACHGKIHGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTE 332
                H                           +L  FLLRR K+ + +     LPP  E
Sbjct: 430 VVQQLHK--------------------------VLRPFLLRRLKSDVEKG----LPPKKE 489

Query: 333 ITVMVPLVNLQRKVYMSILRKELPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIE 392
             + V +  +Q++ Y ++L+K+    L + +G    + L N+ MQLRK C+HPYLF G E
Sbjct: 490 TILKVGMSQMQKQYYKALLQKD----LEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAE 549

Query: 393 P-EPYEEGEHLVQASGKLVILDQVLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYE 452
           P  PY  G+HLV  +GK+V+LD++L KL +   RVL+F+QMT  LDIL+D+L  R + Y 
Sbjct: 550 PGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYC 609

Query: 453 RLDGSIRAEERFAAIRSFSLNCSGSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQ 512
           R+DG+   +ER A+I ++  N  GS      + FVFL+STRAGG+G+NL +AD VI Y+ 
Sbjct: 610 RIDGNTGGDERDASIEAY--NKPGS------EKFVFLLSTRAGGLGINLATADVVILYDS 652

Query: 513 DWNPQVDKQALQRAHRIGQINHVLSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDE 572
           DWNPQVD QA  RAHRIGQ   V      T   IE  ++ RA +KL L   VI +  + E
Sbjct: 670 DWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAE 652

[Close]

BLAST of Cp4.1LG17g10540 vs. TAIR 10
Match: AT5G18620.2 (chromatin remodeling factor17 )

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-85
Identity = 196/541 (36.23%), Postives = 290/541 (53.60%), Query Frame = 0


Query: 33  VTATLKPYQVEGVLWLIRRYHLGVNAILGDEVWFLYHHDVGVRLHYIQCTLCLKIILEIW 92
           +   L+ YQ+ G+ WLIR Y  G+N IL DE+       +G  L  I     L       
Sbjct: 190 IQGKLRDYQLAGLNWLIRLYENGINGILADEM------GLGKTLQTISLLAYL------- 249

Query: 93  DCGWALLMSNVDSHIANFYFLGLVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNS 152
                                 +V+ P S    W++EI RF P L  ++++G+ E RR+ 
Sbjct: 250 ------------HEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHI 309

Query: 153 RRRIFEHATSQSVTDVMLPFDVLLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVL 212
           R  +           V   FD+ +T++++A+ ++  L + +W+Y +IDEA R+KN +S+L
Sbjct: 310 REELL----------VAGKFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLL 369

Query: 213 YNVLKERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSGD 272
              ++  F    RLL+TGTP+QNNL ELWALL+F +P VF + + F   F+ +G+    +
Sbjct: 370 SKTMR-LFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQE 429

Query: 273 PFSFYHNIFLQVLWDNACHGKIHGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTE 332
                H                           +L  FLLRR K+ + +     LPP  E
Sbjct: 430 VVQQLHK--------------------------VLRPFLLRRLKSDVEKG----LPPKKE 489

Query: 333 ITVMVPLVNLQRKVYMSILRKELPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIE 392
             + V +  +Q++ Y ++L+K+    L + +G    + L N+ MQLRK C+HPYLF G E
Sbjct: 490 TILKVGMSQMQKQYYKALLQKD----LEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAE 549

Query: 393 P-EPYEEGEHLVQASGKLVILDQVLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYE 452
           P  PY  G+HLV  +GK+V+LD++L KL +   RVL+F+QMT  LDIL+D+L  R + Y 
Sbjct: 550 PGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYC 609

Query: 453 RLDGSIRAEERFAAIRSFSLNCSGSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQ 512
           R+DG+   +ER A+I ++  N  GS      + FVFL+STRAGG+G+NL +AD VI Y+ 
Sbjct: 610 RIDGNTGGDERDASIEAY--NKPGS------EKFVFLLSTRAGGLGINLATADVVILYDS 652

Query: 513 DWNPQVDKQALQRAHRIGQINHVLSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDE 572
           DWNPQVD QA  RAHRIGQ   V      T   IE  ++ RA +KL L   VI +  + E
Sbjct: 670 DWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAE 652

[Close]

BLAST of Cp4.1LG17g10540 vs. TAIR 10
Match: AT3G06400.1 (chromatin-remodeling protein 11 )

HSP 1 Score: 314.7 bits (805), Expect = 2.5e-85
Identity = 196/541 (36.23%), Postives = 293/541 (54.16%), Query Frame = 0


Query: 33  VTATLKPYQVEGVLWLIRRYHLGVNAILGDEVWFLYHHDVGVRLHYIQCTLCLKIILEIW 92
           +   ++ YQ+ G+ WLIR Y  G+N IL DE+       +G  L  I     L       
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGINGILADEM------GLGKTLQTISLLAYL------- 244

Query: 93  DCGWALLMSNVDSHIANFYFLGLVLCPLSVTDGWVSEIVRFAPHLNVLQYVGDKETRRNS 152
                                 +V+ P S    W++EI RF P L  ++++G+ E RR+ 
Sbjct: 245 ------------HEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHI 304

Query: 153 RRRIFEHATSQSVTDVMLPFDVLLTTYDIALIDQDFLSQIAWQYAVIDEAQRLKNPSSVL 212
           R  +           V   FD+ +T++++A+ ++  L + +W+Y +IDEA R+KN +S+L
Sbjct: 305 REDLL----------VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLL 364

Query: 213 YNVLKERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFISTFKEAGDLTSGD 272
              ++  F    RLL+TGTP+QNNL ELWALL+F +P +F + + F   F+ +G+    +
Sbjct: 365 SKTMR-LFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQE 424

Query: 273 PFSFYHNIFLQVLWDNACHGKIHGNGQFKSLKYILSAFLLRRTKAKLSESGVLLLPPLTE 332
                H                           +L  FLLRR K+ + +     LPP  E
Sbjct: 425 VVQQLHK--------------------------VLRPFLLRRLKSDVEKG----LPPKKE 484

Query: 333 ITVMVPLVNLQRKVYMSILRKELPKLLALSSGSSNHQSLQNVVMQLRKACSHPYLFPGIE 392
             + V +  +Q++ Y ++L+K+L    A+++G    + L N+ MQLRK C+HPYLF G E
Sbjct: 485 TILKVGMSQMQKQYYKALLQKDLE---AVNAG-GERKRLLNIAMQLRKCCNHPYLFQGAE 544

Query: 393 P-EPYEEGEHLVQASGKLVILDQVLQKLHESGHRVLLFAQMTHTLDILQDFLELRNFSYE 452
           P  PY  G+HL+  +GK+V+LD++L KL E   RVL+F+QMT  LDIL+D+L  R + Y 
Sbjct: 545 PGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYC 604

Query: 453 RLDGSIRAEERFAAIRSFSLNCSGSSQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQ 512
           R+DG+   +ER A+I ++  N  GS      + FVFL+STRAGG+G+NL +AD VI Y+ 
Sbjct: 605 RIDGNTGGDERDASIEAY--NKPGS------EKFVFLLSTRAGGLGINLATADVVILYDS 647

Query: 513 DWNPQVDKQALQRAHRIGQINHVLSINLVTAQTIEEVIMRRAERKLQLSKNVIGEDYIDE 572
           DWNPQVD QA  RAHRIGQ   V      T   IEE ++ RA +KL L   VI +  + E
Sbjct: 665 DWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAE 647

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g10540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IV45	0.0e+00	62.50	Probable helicase CHR10 OS=Arabidopsis thaliana OX=3702 GN=CHR10 PE=3 SV=1	[more]
Q7ZU90	2.0e-124	35.94	Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio OX=7955 GN=chd1l...	[more]
Q9CXF7	2.6e-124	35.90	Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus OX=10090 GN=Chd...	[more]
Q3B7N1	2.2e-123	35.54	Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus OX=9913 GN=CHD1L ...	[more]
Q86WJ1	6.4e-123	35.86	Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens OX=9606 GN=CHD1...	[more]

BLAST of Cp4.1LG17g10540 vs. NCBI nr


Match Name	Identity	Description
XP_023515240.1	93.11	probable helicase CHR10 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022959610.1	91.04	probable helicase CHR10 isoform X1 [Cucurbita moschata]	[more]
XP_023004934.1	90.16	probable helicase CHR10 isoform X1 [Cucurbita maxima] >XP_023004935.1 probable h...	[more]
KAG7025346.1	88.53	putative helicase CHR10, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023515243.1	97.63	probable helicase CHR10 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG17g10540 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1H6S3	91.04	probable helicase CHR10 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460635...	[more]
A0A6J1KW01	90.16	probable helicase CHR10 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498093 P...	[more]
A0A6J1H5C0	95.38	probable helicase CHR10 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460635...	[more]
A0A6J1KTI8	94.51	probable helicase CHR10 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498093 P...	[more]
A0A1S3CAH8	81.05	probable helicase CHR10 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498814 PE=4 ...	[more]

BLAST of Cp4.1LG17g10540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44980.2	0.0e+00	62.50	SNF2 domain-containing protein / helicase domain-containing protein	[more]
AT2G44980.1	2.3e-309	62.39	SNF2 domain-containing protein / helicase domain-containing protein	[more]
AT5G18620.1	1.1e-85	36.23	chromatin remodeling factor17	[more]
AT5G18620.2	1.1e-85	36.23	chromatin remodeling factor17	[more]
AT3G06400.1	2.5e-85	36.23	chromatin-remodeling protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 672..692
None	No IPR available	PANTHER	PTHR45623	CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED	coord: 22..910
None	No IPR available	PANTHER	PTHR45623:SF21	HELICASE CHR10-RELATED	coord: 22..910
None	No IPR available	CDD	cd18793	SF2_C_SNF	coord: 400..540 e-value: 9.17589E-50 score: 169.965
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 437..529 e-value: 4.1E-20 score: 82.8
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 408..529 e-value: 7.3E-16 score: 58.5
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 411..577 score: 16.992107
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 33..258 e-value: 1.0E-10 score: 51.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 115..250 score: 15.086311
IPR038718	SNF2-like, N-terminal domain superfamily	GENE3D	3.40.50.10810		coord: 9..325 e-value: 9.2E-57 score: 193.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 326..635 e-value: 8.9E-95 score: 319.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 193..575
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 22..263
IPR000330	SNF2, N-terminal	PFAM	PF00176	SNF2_N	coord: 115..387 e-value: 1.1E-38 score: 132.8
IPR043472	Macro domain-like	GENE3D	3.40.220.10	Leucine Aminopeptidase, subunit E, domain 1	coord: 745..915 e-value: 7.4E-31 score: 109.2
IPR043472	Macro domain-like	SUPERFAMILY	52949	Macro domain-like	coord: 746..910

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g10540.1	Cp4.1LG17g10540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0140658	ATP-dependent chromatin remodeler activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004386	helicase activity