Cp4.1LG17g09620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG17g09620
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionpre-rRNA-processing protein TSR1 homolog
LocationCp4.1LG17: 7384775 .. 7391448 (+)
RNA-Seq ExpressionCp4.1LG17g09620
SyntenyCp4.1LG17g09620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAGTGCCATGGGAGGGAGTCGAGCACAAGTCAATAAACCCCATAAATCACGCTTCTCGTCCAAGGCAACGCGACAACAACACAAAACCTCTTTTAAAGGTGCATATATTCTTTCCTTCTGGTTCGTGGAAACCTGTTGTCGTGTTTCTTTTCTAGTTAATATTTGGTTTATGTAGCTATTGGTTTCTAATTTGAGTTTTGGGCCATCAGATAGAAGCAAAGTTACAAAGAATAATGTAGCTAAGGGAGCTAGGGCTGCTCGTCTTCAGCGTAATAAGATGGTACTTGATGTCCAATCTTTTTCTACTTATTCTTACTTTTCCTTGGGCATATTAAGCTTGTCTCATTGTTGGTGGTGCTTCTTTATTTTAATTACCGAGTTTGCTTGTTGCAGATTCGAGAGCAGAAAAGGGCAGCTGTTTTACAGGACAAAAGAGCATCGAGTGGATCAAAAAATCCTCCTAGAGTTATAGTGAGTAGTTAGAATATCGATAGCATTCTACATTTAGCTTTCTTTCTTATTTAAGTCATTTTCTGTTTTCAGACATTTTTCTTATTCTATTTGTTAATAGTACTGATCACAATGACCACAGGTTCTGTTTGGTCTCTCCGCCTCAGTAGACCTGAATCCACTTGCTGAGGATCTTTTGTCTCTGTTAGCTCCTGGATCTTCGTCATCTACAGTTGCTTCTTCAGAGTACAAGCTACGGGCAACAGTAAGTTCTATCTACGTGATTCTTCATGGTTTTAGTAATATTTTCTAAGTAAATTATTTTTAACAATGTTGTTGGGTCATTGCGAGCAAAGGTAAGTTATTTTTTCACACTACTATCCTTTTCCATTTATTGAATTGTCCTGAGCCCCTAATAATCTTTTTCTGTACCAATCCTTATGTTTGCTTTCATTGGGTCAAATTTTTATGCTTCAGGTACTGAAAGCACCCTATGGTGATTTGCAATCGTGTATGGAGATGGCTAAGGTTCTAACTTCTCCTGAAATTGTATCTTTTGTTATTTCTTCACTCATCAAGTTTTAACTTTTGATCTTTAGTTTGTTAATTGGCCATGTACCCATTAATTTGTAGGTAGCCGACCTAATTGCTTTTGTGACCTCTGCGAGCTACTATATTGAAGGAAGCACATCTCTCTACATTGATTCATTTGGAAGCGAATGCCTTTCCCTATTAAGATCTCTGGGTTTACCGAGTACTGCAGTGTTTATTCGAGTATGTTCCTTTTTTGAGACTTCTAATCTAAAAGGAGAAGAATTCTTTGCTCGTACAGTTAAAGCTTTTTTTTTTCTTTTCCGGCAGGACCTACCCACTGATATAAAGAAAAGAAACGATTATAAAAAAATGTGTATTTCTAGCATTACTTCTGAATTTCCGGAGGATTGTAAGTTTTATCCTGCAGATACTAAAGATGAGTTACACAAGGTAAATAAGTTTCAGTTGTTCGTGTAGATTACTCATTTACACACCTTTTTATGCTCATTTAGTTATTTTAATGATTTGTATTTGTATTTGCAGTTTATGTGGCTTTTTAAGGAGCAAAGACTCACTGTTCCTCATTGGAGAAATCAAAGGCCTTATTTGATGTCTCAAAAGGTCTTTAAATATGTGTATTTTAATACATTCATAGCTTTGATCACTGTTTTCCTTTTTACTCTAAGAGGAACATCTGCTTGTTATTTATTATTTTGCTAATTCTCTGGCACTACTGTAGGTTGATATGGTAGCTGATAATTGTACTTCAGGAAAATGTACCCTTCTTCTCACTGGTTATCTACGTGCTAGGAGTCTTTCTGTGAATCAGCTGGTAGAGTCCTCTGCTTTGCCATTTTTCTTGCTTCAGGTAGGTTGATTTGTTGTTCATATGTGCCTTTCTTTTTATCAGGTTCATGTTGCTGGAGCAGGAGATTTCCAGCTTTGCAAAATTGAAGTTCTCAAGGATCCAGTTCCATTGAATCCAAGAATGGAACAAGATGCTATGGATACTCACGATGTGGAGGTAATTATATATTTTCTACTGAAAAGCTATTCTTGTAGATTAGTTTCTTCATTAACTGTTCAGTTTGAGAAATGTATCAATAGGGGGATGGAATTTCCTTCTCTCATAGGTATTACGGTGCATATTTTACTTGCATTGTGCTTCAAGTGAAGTTTTTAAATAATATTTTATGTTTGCATATAACGCTTGCTCCTTGTGTATGCATTCACTTTCTTACGGATTTTAAATTTCACCTTTCTTGACATGTAGGTTATTCAACTGTTGGAGCCATCAGAGCAAGAGCCATTGGTTGTCGAGAACGATCCTGATCCTCTGTCTGGTGAACAGGTGTTCTTTTTTAATAAGAAATATACTTTTCTATAAAAACCGAGTCAAGACATTGGTCTTTTTTCATGCATGGTTTACTATTCTTAATTTCCTTGCTATTTCTTCTTTCATGGTGGCTGGTGGGAGTTAAATACATGATTTAAAAATATTCATGTAAAAGCTAAAAAGAAGTTAACTTGAGATATGGAAGTCAACTAGATTAGAATTATACTTTTTATTCTTGTTATTTTTTTCCTCGTAGTTTTAAAATTGTTTTAGTCTTGTTATATGCTTCCAAACTAATCTAAGAGCCTTAAGGTGTTTCTACATTCTTTAATCTTGTTGTACAAATGCTATTTCTAGGACAAAATCTCATGCCACTTGGTTAGTTATATTTATAGTTGATGTTTGAGACTGTTGATTTGTTTTTCTCTCAGACTTGGCCAACTGAGGCAGACAGAGCTGAGGCCGATAGAAATCAGAAAGAAAAGCATTTAAGGAAAAGAGCACTTGCTCATGGCACTTCTGAGTATCAGGTTTGCATATTAATCTGATAATGCTTCCCCCACGATTTACATGTTCATAGTTTTATACTACTTCTCAGCATCTCATATTTTTTCCTTCACTTCTACCAAAATACACAGGAAGCTTGGGAAATAGGTGACACAGATGATGAGGATTCTGATGTTGACAATGAATCTGATGGTATGATGTTAGACAGTGGTTATACAAATGAAGTGGATGACCTTAATAATCCATGCCTCAGTGATGATGATCAAGCTTCTTTTGAGTTAATAAATTCTGATCACGAGACAGATATGGATTCTGTGATGATGGTGAGAATCTCATTGTTTTTTTTTTTTTATCTGTGATTTACCATTGCTTATTTCACCAGACTATGACTATTGCTTCAAAGCTAGAGAACTAGCATCCTGGGGTGCAACTAGAAATAGACAACCTTCTAGTTATTATAAGCTTTTTGTAGTATGCTGAAAAAATGGAATATTATAAGGGGATTTTAAATCTTAAAAGAACTGCGGAAAGTTTCAAAAAGTCTGCACTGCTAGGAATCATCATATTGATTGAATTCCAAACTATCTTCAGTCCATCTTAAACCAATTGAAGTAAAGAATAAAATTGTATTCCAAACCATCTTCAATCTCTATGCCTATCATTGATGTGTTGGTTTCTTTCCAGGCAAATTAACCTAACAAAGTGTTGAAGCTTGCACAGTTCTAACTATTATTTTCACCTTTTACATAACGCTCCAGTCACATCATAGGATAACTCCTAGTATTATTCGAGTAAATGTTGAATTAAGAGAGAAGCTTAGCAAATATAGAGTGAACTCACAGTAATAAACAGAACGATAAACCAAATCTTGTGCATTACAAATTAAAATAGAGAAAAAACTAAATCATAAAAAGAGATTAAGAGGGCATTCTCTTTTACAACTTTCATAACTTGAACTTTCTTATGCATTGAGAGTAAGGTTACTTTTTGCCTCTCTCTACCGTTTCTTGTTGATGCTGCCTAGTCACTCAAATTTCATTCCAATGCAGGATGGTGAAAACTTGACCAACGAACAAAAATTGGATGAGATTCAAAAGATTAAAAATGCTCACGCTGATGATGAAGGTTAGTTTGTTTTATTTTATTTTATTTCTTATGGATATTGAAGAGTTATCGAAACATTGATGACAGTTTGAATGCAGTGTTTCCGTACAATTACGAGATTATCAGTTTCTTGCATGTAAAACAACTGAGCATGAAAGTTTGTGGCAGATGCTTGGTGGTGTTCAATGTTATATATGGATGTTCAATAATCTTTCTTATTTGTCGTTACAGAATTTCCAGATGAAGTGGATACACCTATGGATATTCCTGCCAGAAAGCGCTTTGCGAAGTATAGAGGTCTTAAATCCTTTAGGACATCCTCGTGGGATCCTCAAGTATAATTCCTATTATTCAATTATGCTTTCACATACTATTTCTTAACATTACTCTAATTCACCAAAACCTCTCTATCTTTCTAATTCAGGAAAGTTTGCCTCAAGATTATTCTAGAATTTTTGAATTCAGTAACATTTCCAGAACACAAAAGCACGTTCTTGCTAAAGCTCTAGAATTAGAGCAAGGGAATAGAGATGACTGTGTGGCATCAAGCTCCTATTTAAGGCTGCATGTGAAGGAAGTGCCCATTGGTGCTGCTTCAAAATTATGTGAGTTAGCAAAGTCAATGCCAATTACAGCTTGTGGACTTCTGCAGCATGAATCCAAGATGTCTGTCCTCCATTTCAGGTACTTATTGCTGAACTGCCATCTATTCTTCTGTGAATAAATTCTAGCTTCTAACTAATATTGTTTCAGCATCAAGATGCATGATGTCTCTGAAGAGATATCCGATAATGTTGGGACTACTCAGAACTCCAAGAAGCATGATAAGAAATCTCATCCCCTCAAGGGAAAAGAAAAATTGGTGTTCCATGTTGGGTTTCGTCAATTTGTTACAAGGTATTTTTTTAACTTTTCGATAAGAGGCATCTGCCTTTTCACTTTTACAGTTTTAGATAACCATCTCTCAAATTTCAGGCCAATATTTTCATCTGACAACTTTAATTCGGACAAGCACAAGATGGAGAGATTTCTACATGCTGGAAGATTTTCTATTGCTTCAATTTATGCTCCTATATCGTTTGCTCCACTTCCTTTGATAGTCCTGAGGAATGTCGAAGGAATCTCTTCATTTGCTGCTTCTGGTTCGTTAAAGTGTATTGACCCCAGGCGGATAATTTTGAAGAAGATTATTTTATCCGGGTAATGAAATCTATGTCCTTGTCAACAAAGTAATGATTTTTTTTACCTCATTTGAAAATATTGTTTTCGTTATTCACTTTATCAAACAATAGAATTATACTTCCCACAAAGGGAGAGGGAAAGAAGGGGAAATGGTTGTCTACTAGTTTGTCTTAGTATGCAAATTTTATTATCTTATTTTGTTGAATTTAAGCTCTTTAAGCTTACCATCTTGAAATACTCGTTCTTGAGCTTACGGTCAGCGAACAACTCAACATCAGTTCAATAGTCTATTATTTATTATTATTATTATTTTCATCAGTTTATATAGTTTTCGGAATTATTTTTCATGAATTAATCTGATGCAGTGGGAATTTCATAATTGTTAAAACTGAAAGCTGTCTTCCGTTTGTTGTGTGCAGTTATCCTCAAAGAGTATCGAAATTGAAAGCTACAGTGAGATATATGTTTCACAATCCTGATGACGTGAGATGGTTCAAGGTAAGAGAATGCATATAAGTTTGTTAACTGTTACTTTTTGAATGGTATTAATTGAAATTGAACAGATCTTGTATTAGAATGCCCTATGCCCTCTTCTCCCGTTCTTAACTAAGACTTCCCTGGCAGGATGAATTAAATAGTGCTTTCTTCAAATTGGGGAACTTTTTTTAAAAGTATCGCTAATGATTCATTCTAAACTCAATTTTTCACAGGACAATTATATGCTTTTGGTTGAGAAACATAGAATCATAGTATAAAATTGAAATGATAAACGGAGGAATAAAGTAAGGGCTTGAACTCAAAGCTCTTGCATTGAATGGTTGCTATTTTAATAAATAAAAAATCCTTGCATGAAGATTATCACTTGCTATGGAATATATCTTATATTATGGTTTTTCCTCCTAATGTTGAATGATTGATGCAGCCTGTGGATGTGTGGACGAAGTGTGGCAGACGCGGTCGTGTAAAGGAACCTGTTGGTACACACGGTAAGCTTCCCAATACCTGAACTTCAGTACTTACCCTAGACATGGCTAATAATCTTCCTCATAGTCCTATCATTATAACATGTGGCCTGTTGTAATCTTGTGCGACACAGGAGCAATGAAGTGTATTTTCAATGGAGTTTTACAGCAACATGACACAGTTTGCATGAGCTTATACAAGCGTGTTTATCCCAAATGGCCTGAACACCTCTTCCCTCTCCTTGATGTTTGAGATTGCTGTATGAACCAGATTGAAGTTTTGATGTATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGCTTATTATGTATTTATAGCCCTACAGGAGGAACAATTTTGATTTGTAAGGTGGCAAAGCTAGAGTTCCAGCCCCCTTTTCTTAGATAACATATTTGAAAATTATTGAGGGAAATGGATGCATTTAAAATTCTGATAGAGTAGAGTTGGTCTATTCCAACTAAAAAAGTGAAGCAATAAATTTAGAGTGTTGTACAAGATTTAGCAGTTATTGCCTCAAAAAAAGGCTATAAGTTATTGCCCCTACAAAAACATA

mRNA sequence

ACAGTGCCATGGGAGGGAGTCGAGCACAAGTCAATAAACCCCATAAATCACGCTTCTCGTCCAAGGCAACGCGACAACAACACAAAACCTCTTTTAAAGCTATTGGTTTCTAATTTGAGTTTTGGGCCATCAGATAGAAGCAAAGTTACAAAGAATAATGTAGCTAAGGGAGCTAGGGCTGCTCGTCTTCAGCGTAATAAGATGATTCGAGAGCAGAAAAGGGCAGCTGTTTTACAGGACAAAAGAGCATCGAGTGGATCAAAAAATCCTCCTAGAGTTATAGTTCTGTTTGGTCTCTCCGCCTCAGTAGACCTGAATCCACTTGCTGAGGATCTTTTGTCTCTGTTAGCTCCTGGATCTTCGTCATCTACAGTTGCTTCTTCAGAGTACAAGCTACGGGCAACAGTACTGAAAGCACCCTATGGTGATTTGCAATCGTGTATGGAGATGGCTAAGGTAGCCGACCTAATTGCTTTTGTGACCTCTGCGAGCTACTATATTGAAGGAAGCACATCTCTCTACATTGATTCATTTGGAAGCGAATGCCTTTCCCTATTAAGATCTCTGGGTTTACCGAGTACTGCAGTGTTTATTCGAGACCTACCCACTGATATAAAGAAAAGAAACGATTATAAAAAAATGTGTATTTCTAGCATTACTTCTGAATTTCCGGAGGATTGTAAGTTTTATCCTGCAGATACTAAAGATGAGTTACACAAGTTTATGTGGCTTTTTAAGGAGCAAAGACTCACTGTTCCTCATTGGAGAAATCAAAGGCCTTATTTGATGTCTCAAAAGGTTGATATGGTAGCTGATAATTGTACTTCAGGAAAATGTACCCTTCTTCTCACTGGTTATCTACGTGCTAGGAGTCTTTCTGTGAATCAGCTGGTTCATGTTGCTGGAGCAGGAGATTTCCAGCTTTGCAAAATTGAAGTTCTCAAGGATCCAGTTCCATTGAATCCAAGAATGGAACAAGATGCTATGGATACTCACGATGTGGAGGTTATTCAACTGTTGGAGCCATCAGAGCAAGAGCCATTGGTTGTCGAGAACGATCCTGATCCTCTGTCTGGTGAACAGACTTGGCCAACTGAGGCAGACAGAGCTGAGGCCGATAGAAATCAGAAAGAAAAGCATTTAAGGAAAAGAGCACTTGCTCATGGCACTTCTGAGTATCAGGAAGCTTGGGAAATAGGTGACACAGATGATGAGGATTCTGATGTTGACAATGAATCTGATGGTATGATGTTAGACAGTGGTTATACAAATGAAGTGGATGACCTTAATAATCCATGCCTCAGTGATGATGATCAAGCTTCTTTTGAGTTAATAAATTCTGATCACGAGACAGATATGGATTCTGTGATGATGGATGGTGAAAACTTGACCAACGAACAAAAATTGGATGAGATTCAAAAGATTAAAAATGCTCACGCTGATGATGAAGAATTTCCAGATGAAGTGGATACACCTATGGATATTCCTGCCAGAAAGCGCTTTGCGAAGTATAGAGGTCTTAAATCCTTTAGGACATCCTCGTGGGATCCTCAAGAAAGTTTGCCTCAAGATTATTCTAGAATTTTTGAATTCAGTAACATTTCCAGAACACAAAAGCACGTTCTTGCTAAAGCTCTAGAATTAGAGCAAGGGAATAGAGATGACTGTGTGGCATCAAGCTCCTATTTAAGGCTGCATGTGAAGGAAGTGCCCATTGGTGCTGCTTCAAAATTATGTGAGTTAGCAAAGTCAATGCCAATTACAGCTTGTGGACTTCTGCAGCATGAATCCAAGATGTCTGTCCTCCATTTCAGCATCAAGATGCATGATGTCTCTGAAGAGATATCCGATAATGTTGGGACTACTCAGAACTCCAAGAAGCATGATAAGAAATCTCATCCCCTCAAGGGAAAAGAAAAATTGGTGTTCCATGTTGGGTTTCGTCAATTTGTTACAAGGCCAATATTTTCATCTGACAACTTTAATTCGGACAAGCACAAGATGGAGAGATTTCTACATGCTGGAAGATTTTCTATTGCTTCAATTTATGCTCCTATATCGTTTGCTCCACTTCCTTTGATAGTCCTGAGGAATGTCGAAGGAATCTCTTCATTTGCTGCTTCTGGTTCGTTAAAGTGTATTGACCCCAGGCGGATAATTTTGAAGAAGATTATTTTATCCGGTTATCCTCAAAGAGTATCGAAATTGAAAGCTACAGTGAGATATATGTTTCACAATCCTGATGACGTGAGATGGTTCAAGCCTGTGGATGTGTGGACGAAGTGTGGCAGACGCGGTCGTGTAAAGGAACCTGTTGGTACACACGGAGCAATGAAGTGTATTTTCAATGGAGTTTTACAGCAACATGACACAGTTTGCATGAGCTTATACAAGCGTGTTTATCCCAAATGGCCTGAACACCTCTTCCCTCTCCTTGATGTTTGAGATTGCTGTATGAACCAGATTGAAGTTTTGATGTATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGCTTATTATGTATTTATAGCCCTACAGGAGGAACAATTTTGATTTGTAAGGTGGCAAAGCTAGAGTTCCAGCCCCCTTTTCTTAGATAACATATTTGAAAATTATTGAGGGAAATGGATGCATTTAAAATTCTGATAGAGTAGAGTTGGTCTATTCCAACTAAAAAAGTGAAGCAATAAATTTAGAGTGTTGTACAAGATTTAGCAGTTATTGCCTCAAAAAAAGGCTATAAGTTATTGCCCCTACAAAAACATA

Coding sequence (CDS)

ACAGTGCCATGGGAGGGAGTCGAGCACAAGTCAATAAACCCCATAAATCACGCTTCTCGTCCAAGGCAACGCGACAACAACACAAAACCTCTTTTAAAGCTATTGGTTTCTAATTTGAGTTTTGGGCCATCAGATAGAAGCAAAGTTACAAAGAATAATGTAGCTAAGGGAGCTAGGGCTGCTCGTCTTCAGCGTAATAAGATGATTCGAGAGCAGAAAAGGGCAGCTGTTTTACAGGACAAAAGAGCATCGAGTGGATCAAAAAATCCTCCTAGAGTTATAGTTCTGTTTGGTCTCTCCGCCTCAGTAGACCTGAATCCACTTGCTGAGGATCTTTTGTCTCTGTTAGCTCCTGGATCTTCGTCATCTACAGTTGCTTCTTCAGAGTACAAGCTACGGGCAACAGTACTGAAAGCACCCTATGGTGATTTGCAATCGTGTATGGAGATGGCTAAGGTAGCCGACCTAATTGCTTTTGTGACCTCTGCGAGCTACTATATTGAAGGAAGCACATCTCTCTACATTGATTCATTTGGAAGCGAATGCCTTTCCCTATTAAGATCTCTGGGTTTACCGAGTACTGCAGTGTTTATTCGAGACCTACCCACTGATATAAAGAAAAGAAACGATTATAAAAAAATGTGTATTTCTAGCATTACTTCTGAATTTCCGGAGGATTGTAAGTTTTATCCTGCAGATACTAAAGATGAGTTACACAAGTTTATGTGGCTTTTTAAGGAGCAAAGACTCACTGTTCCTCATTGGAGAAATCAAAGGCCTTATTTGATGTCTCAAAAGGTTGATATGGTAGCTGATAATTGTACTTCAGGAAAATGTACCCTTCTTCTCACTGGTTATCTACGTGCTAGGAGTCTTTCTGTGAATCAGCTGGTTCATGTTGCTGGAGCAGGAGATTTCCAGCTTTGCAAAATTGAAGTTCTCAAGGATCCAGTTCCATTGAATCCAAGAATGGAACAAGATGCTATGGATACTCACGATGTGGAGGTTATTCAACTGTTGGAGCCATCAGAGCAAGAGCCATTGGTTGTCGAGAACGATCCTGATCCTCTGTCTGGTGAACAGACTTGGCCAACTGAGGCAGACAGAGCTGAGGCCGATAGAAATCAGAAAGAAAAGCATTTAAGGAAAAGAGCACTTGCTCATGGCACTTCTGAGTATCAGGAAGCTTGGGAAATAGGTGACACAGATGATGAGGATTCTGATGTTGACAATGAATCTGATGGTATGATGTTAGACAGTGGTTATACAAATGAAGTGGATGACCTTAATAATCCATGCCTCAGTGATGATGATCAAGCTTCTTTTGAGTTAATAAATTCTGATCACGAGACAGATATGGATTCTGTGATGATGGATGGTGAAAACTTGACCAACGAACAAAAATTGGATGAGATTCAAAAGATTAAAAATGCTCACGCTGATGATGAAGAATTTCCAGATGAAGTGGATACACCTATGGATATTCCTGCCAGAAAGCGCTTTGCGAAGTATAGAGGTCTTAAATCCTTTAGGACATCCTCGTGGGATCCTCAAGAAAGTTTGCCTCAAGATTATTCTAGAATTTTTGAATTCAGTAACATTTCCAGAACACAAAAGCACGTTCTTGCTAAAGCTCTAGAATTAGAGCAAGGGAATAGAGATGACTGTGTGGCATCAAGCTCCTATTTAAGGCTGCATGTGAAGGAAGTGCCCATTGGTGCTGCTTCAAAATTATGTGAGTTAGCAAAGTCAATGCCAATTACAGCTTGTGGACTTCTGCAGCATGAATCCAAGATGTCTGTCCTCCATTTCAGCATCAAGATGCATGATGTCTCTGAAGAGATATCCGATAATGTTGGGACTACTCAGAACTCCAAGAAGCATGATAAGAAATCTCATCCCCTCAAGGGAAAAGAAAAATTGGTGTTCCATGTTGGGTTTCGTCAATTTGTTACAAGGCCAATATTTTCATCTGACAACTTTAATTCGGACAAGCACAAGATGGAGAGATTTCTACATGCTGGAAGATTTTCTATTGCTTCAATTTATGCTCCTATATCGTTTGCTCCACTTCCTTTGATAGTCCTGAGGAATGTCGAAGGAATCTCTTCATTTGCTGCTTCTGGTTCGTTAAAGTGTATTGACCCCAGGCGGATAATTTTGAAGAAGATTATTTTATCCGGTTATCCTCAAAGAGTATCGAAATTGAAAGCTACAGTGAGATATATGTTTCACAATCCTGATGACGTGAGATGGTTCAAGCCTGTGGATGTGTGGACGAAGTGTGGCAGACGCGGTCGTGTAAAGGAACCTGTTGGTACACACGGAGCAATGAAGTGTATTTTCAATGGAGTTTTACAGCAACATGACACAGTTTGCATGAGCTTATACAAGCGTGTTTATCCCAAATGGCCTGAACACCTCTTCCCTCTCCTTGATGTTTGA

Protein sequence

TVPWEGVEHKSINPINHASRPRQRDNNTKPLLKLLVSNLSFGPSDRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVDLNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSASYYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDDEDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLTNEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKSMPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISSFAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV
Homology
[Close]
BLAST of Cp4.1LG17g09620 vs. ExPASy Swiss-Prot
Match: Q5XGY1 (Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis OX=8355 GN=tsr1 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 7.5e-123
Identity = 285/788 (36.17%), Postives = 422/788 (53.55%), Query Frame = 0 

Query: 51  KNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASV---DLNP 110
           K N     +  R  +   IR Q++ AVL +KR+      PP +++   L A     DL  
Sbjct: 48  KKNKKDLRKLDRRHKANQIRRQRKDAVLAEKRSLGTKDGPPHLVIAISLHARAVKDDLFS 107

Query: 111 LAE----DLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSA 170
           L +    D+L +         +   + K R   ++A   DL S +++AKVAD + F+   
Sbjct: 108 LVQNNEGDILHVNDQIKGLLALVCPKVKQRWCFIQANRDDLCSLLDLAKVADTLLFLLDP 167

Query: 171 SYYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLP-TDIKKRNDYKKMCISSITSE 230
               EG      DS+G  CLS L + GLPS  + ++ +    IKKR D KK     I + 
Sbjct: 168 Q---EG-----WDSYGDYCLSCLFAQGLPSYVLAVQGMNYIPIKKRADIKKQLSKVIENR 227

Query: 231 FPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLL 290
           F  D K +  DT+ E    +     Q+     +R++R Y+++Q+ D    + +    TL 
Sbjct: 228 F-TDAKLFQLDTEQEAAVLIRQISTQKQRHLAFRSRRSYMLAQRADFQPTDESGLVGTLK 287

Query: 291 LTGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDT----------- 350
           L+GY+R + L+VN+LVH+ G GDF + +I+   DP PLNPR+ +    +           
Sbjct: 288 LSGYVRGQELNVNRLVHIVGHGDFHMSQIDAPPDPYPLNPRVHKPKTKSGQDMEMSDEPA 347

Query: 351 ------HDVEVIQLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRA 410
                  D++V+   +PS QE L  E  PDP+ GEQTWPTE +  EA+   K      + 
Sbjct: 348 TGSEMEQDIKVLMKADPSAQESLQCEVVPDPMEGEQTWPTEEELKEAEDALKGTSKVVKK 407

Query: 411 LAHGTSEYQEAWEIGD--------TDDEDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDD 470
           +  GTS YQ AW + D         DD+D D++ +++  M D  Y+ E D   N    + 
Sbjct: 408 VPKGTSAYQAAWILDDEGDGEEESDDDDDEDMEEDAEDAM-DDAYSEEEDGSGNEEAEES 467

Query: 471 DQASFELINSDHETDMDSVMMDGENLTNEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPA 530
           +  +      D + D        EN+  +++   ++K K     DE FPDEVDTP D  A
Sbjct: 468 ETLTIPDSTRDDKYD--------ENVDEQEEEQMLEKYK-LQRQDEVFPDEVDTPRDQIA 527

Query: 531 RKRFAKYRGLKSFRTSSWDPQESLPQDYSRIFEFSNISRTQKHVLAKALELEQGNRDDCV 590
           R RF KYRGLKSFRTS WD +E+LP+DY+RIF+F +  RT+K V       E+  +D+  
Sbjct: 528 RIRFQKYRGLKSFRTSPWDVKENLPRDYARIFQFHDFFRTRKRVFK-----EEEEKDEGA 587

Query: 591 ASSSYLRLHVKEVPIGAASKLCELAKSMPITACGLLQHESKMSVLHFSIKMHDVSEEISD 650
               Y+ +H+  VP+   S +      +P+  C LL HE KMSV++  ++ H  + E   
Sbjct: 588 MVGWYVTVHISAVPV---SVMEHFKHGLPLVLCSLLPHEQKMSVMNMLVRRHPGNNE--- 647

Query: 651 NVGTTQNSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRF 710
                           P+K KE+L+FH GFR+F   P+FS  + ++DKHK ERFL +   
Sbjct: 648 ----------------PIKAKEELIFHCGFRRFRASPLFSQHS-SADKHKSERFLRSDTS 707

Query: 711 SIASIYAPISFAPLPLIVLR-NVEGISSFAASGSLKCIDPRRIILKKIILSGYPQRVSKL 770
            + ++YAPI+F P  ++V +    G+    A+GSL  ++P RI++K+I+LSG+P ++ K 
Sbjct: 708 VVVTVYAPITFPPASVLVFKQRYNGMQDLVATGSLLNVNPDRIVIKRIVLSGHPFKIMKR 767

Query: 771 KATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSL 805
            A VRYMF N +DV WFKPV++ TK GRRG +KEP+GTHG MKC F+G L+  DTV M+L
Sbjct: 768 TAVVRYMFFNREDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCHFDGQLKSQDTVLMNL 788

[Close]
BLAST of Cp4.1LG17g09620 vs. ExPASy Swiss-Prot
Match: Q5R434 (Pre-rRNA-processing protein TSR1 homolog OS=Pongo abelii OX=9601 GN=TSR1 PE=2 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.4e-121
Identity = 294/784 (37.50%), Postives = 428/784 (54.59%), Query Frame = 0 

Query: 58  ARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVDLNPLAEDLLSLLA 117
           +R  +  R   +R+QK+ AVL +KR   G   PP  +++  L + + L P A  LL    
Sbjct: 49  SRVDQRHRASQLRKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISL-PEAMQLLQDRD 108

Query: 118 PG---------SSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSASYYIE 177
            G         + S  +     K R     A  GDL   ++MAKVAD I F+      +E
Sbjct: 109 TGTVHLNELGNTQSFMLLCPRLKHRWFFTSARPGDLHIVLDMAKVADTILFLLDP---LE 168

Query: 178 GSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLP-TDIKKRNDYKKMCISSITSEFPEDC 237
           G      DS G  CLS L + GLP+  + ++ +    +KK+ D +K    ++   FP D 
Sbjct: 169 G-----WDSTGDYCLSCLFAQGLPTYTLAVQGISGLPLKKQIDARKKLSKAVEKRFPHD- 228

Query: 238 KFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLTGYL 297
           K    DT+ E    +     Q+     +R++R YL ++ VD VA    +   TL ++GY+
Sbjct: 229 KLLLLDTQQEAGMLLRQLANQKQQHLAFRDRRAYLFARAVDFVASEENNLVGTLKISGYV 288

Query: 298 RARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPR-----------MEQDAMDTHD--- 357
           R ++L+VN+L+H+ G GDFQ+ +I+   DP PLNPR           ME  A DT D   
Sbjct: 289 RGQTLNVNRLLHIVGHGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDTVDDME 348

Query: 358 --VEVIQLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTS 417
             ++V+   +P  QE L  E  PDP+ GEQTWPTE + +EA    KE     + +  GTS
Sbjct: 349 EGLKVLMKADPDRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTS 408

Query: 418 EYQEAWEIGDTDDEDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHET 477
            YQ  W +        D  ++S G     G   E DD+ +    +++       +S+ E 
Sbjct: 409 SYQAEWIL--------DGGSQSGG----EGDEYEYDDMEHEDFMEEESQD---ESSEEEE 468

Query: 478 DMDSVMMDGENLTN---EQKLDE------IQKIKNAHADDEEFPDEVDTPMDIPARKRFA 537
           +    M  GE++ +   ++K+DE      ++K K     +E FPDEVDTP D+ AR RF 
Sbjct: 469 EEYETMTIGESVHDDLYDKKIDEEAEAKMLEKYKQERL-EEMFPDEVDTPRDVAARIRFQ 528

Query: 538 KYRGLKSFRTSSWDPQESLPQDYSRIFEFSNISRTQKHVLAKALELE-QGNRDDCVASSS 597
           KYRGLKSFRTS WDP+E+LPQDY+RIF+F N + T+K +  +  E E +G    C     
Sbjct: 529 KYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAEVGC----- 588

Query: 598 YLRLHVKEVPIGAASKLCELAKSMPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGT 657
           Y+ LHV EVP+      C   +  P+ A  LL HE KMSVL+  ++          + G 
Sbjct: 589 YVTLHVSEVPVSVVE--C-FRQGTPLIAFSLLPHEQKMSVLNMVVRR---------DPGN 648

Query: 658 TQNSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIAS 717
           T+          P+K KE+L+FH GFR+F   P+F S +  +DKHK++RFL A    +A+
Sbjct: 649 TE----------PVKAKEELIFHCGFRRFRASPLF-SQHTAADKHKLQRFLTADMALVAT 708

Query: 718 IYAPISFAPLPLIVLR-NVEGISSFAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATV 777
           +YAPI+F P  +++ +    G+ S  A+G L  +DP R+++K+++LSG+P ++    A V
Sbjct: 709 VYAPITFPPASVLLFKQKSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPLKMFTKMAVV 768

Query: 778 RYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRV 805
           RYMF N +DV WFKPV++ TK GRRG +KEP+GTHG MKC FNG L+  DTV M+LYKRV
Sbjct: 769 RYMFFNREDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFNGKLKSQDTVLMNLYKRV 778

[Close]
BLAST of Cp4.1LG17g09620 vs. ExPASy Swiss-Prot
Match: Q2NL82 (Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens OX=9606 GN=TSR1 PE=1 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.5e-118
Identity = 288/783 (36.78%), Postives = 421/783 (53.77%), Query Frame = 0 

Query: 58  ARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVDLNPLAEDLLSLLA 117
           +R  +  R   +R+QK+ AVL +KR   G   PP  +++  L + + L P A  LL    
Sbjct: 49  SRVDQRHRASQLRKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISL-PEAMQLLQDRD 108

Query: 118 PG---------SSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSASYYIE 177
            G         + +  +     K R     A  GDL   ++MAKVAD I F+      +E
Sbjct: 109 TGTVHLNELGNTQNFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLLDP---LE 168

Query: 178 GSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLP-TDIKKRNDYKKMCISSITSEFPEDC 237
           G      DS G  CLS L + GLP+  + ++ +    +KK+ D +K    ++   FP D 
Sbjct: 169 G-----WDSTGDYCLSCLFAQGLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHD- 228

Query: 238 KFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLTGYL 297
           K    DT+ E    +     Q+     +R++R YL +  VD V     +   TL ++GY+
Sbjct: 229 KLLLLDTQQEAGMLLRQLANQKQQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYV 288

Query: 298 RARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPR-----------MEQDAMDTHD--- 357
           R ++L+VN+L+H+ G GDFQ+ +I+   DP PLNPR           ME  A D  D   
Sbjct: 289 RGQTLNVNRLLHIVGYGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDME 348

Query: 358 --VEVIQLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTS 417
             ++V+   +P  QE L  E  PDP+ GEQTWPTE + +EA    KE     + +  GTS
Sbjct: 349 EGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTS 408

Query: 418 EYQEAWEIGDTDDEDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHET 477
            YQ  W +        D  ++S G     G   E DD+ +    +++        S  E 
Sbjct: 409 SYQAEWIL--------DGGSQSGG----EGDEYEYDDMEHEDFMEEESQD----ESSEEE 468

Query: 478 DMDSVMMDGENLTN---EQKLDE------IQKIKNAHADDEEFPDEVDTPMDIPARKRFA 537
           +    M  GE++ +   ++K+DE      ++K K     +E FPDEVDTP D+ AR RF 
Sbjct: 469 EEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERL-EEMFPDEVDTPRDVAARIRFQ 528

Query: 538 KYRGLKSFRTSSWDPQESLPQDYSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSY 597
           KYRGLKSFRTS WDP+E+LPQDY+RIF+F N + T+K +  +  E E    +       Y
Sbjct: 529 KYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAE----VGWY 588

Query: 598 LRLHVKEVPIGAASKLCELAKSMPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTT 657
           + LHV EVP+      C   +  P+ A  LL HE KMSVL+  ++          + G T
Sbjct: 589 VTLHVSEVPVSVVE--C-FRQGTPLIAFSLLPHEQKMSVLNMVVRR---------DPGNT 648

Query: 658 QNSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASI 717
           +          P+K KE+L+FH GFR+F   P+F S +  +DKHK++RFL A    +A++
Sbjct: 649 E----------PVKAKEELIFHCGFRRFRASPLF-SQHTAADKHKLQRFLTADMALVATV 708

Query: 718 YAPISFAPLPLIVLR-NVEGISSFAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVR 777
           YAPI+F P  +++ +    G+ S  A+G L  +DP R+++K+++LSG+P ++    A VR
Sbjct: 709 YAPITFPPASVLLFKQKSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVR 768

Query: 778 YMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVY 805
           YMF N +DV WFKPV++ TK GRRG +KEP+GTHG MKC F+G L+  DTV M+LYKRV+
Sbjct: 769 YMFFNREDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVF 777

[Close]
BLAST of Cp4.1LG17g09620 vs. ExPASy Swiss-Prot
Match: Q5SWD9 (Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 PE=1 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.7e-115
Identity = 285/790 (36.08%), Postives = 419/790 (53.04%), Query Frame = 0 

Query: 42  GPSDRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSA 101
           GP    K  K  +   +R  +  R   +R+QKR +VL +KR       PP  +++  L +
Sbjct: 36  GPKILCKKLKRQL---SRIDQRHRASQLRKQKRESVLAEKRQLGSKDGPPHQVLVVPLHS 95

Query: 102 SVDLNPLAEDLLS--------LLAPGSSSS-TVASSEYKLRATVLKAPYGDLQSCMEMAK 161
            + L P A  LL         L   GS+ S  +     K R     A  GDL + ++MAK
Sbjct: 96  RISL-PEAFKLLQNEDLGTVYLSERGSTQSFMLLCPSLKHRWFFTYARPGDLHTLLDMAK 155

Query: 162 VADLIAFVTSASYYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLP-TDIKKRNDY 221
           VAD I F+      +EG      DS G  CLS L + GLP+  + ++ L     KK+ D 
Sbjct: 156 VADTILFLLDP---LEG-----WDSTGDYCLSCLFAQGLPTYTLAVQGLSGFPPKKQIDA 215

Query: 222 KKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVA 281
           +K     +   FPED K    DT+ E    +     Q+     +R++R YL +   D V 
Sbjct: 216 RKKLSKMVEKRFPED-KLLLLDTQQESGMLLRQLANQKQRHLAFRDRRAYLFAHVADFVP 275

Query: 282 DNCTSGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPR-------- 341
              +    TL ++GY+R R+L+VN L+H+ G GDFQ+ +I+   DP PLNPR        
Sbjct: 276 SEESDLVGTLKISGYVRGRTLNVNSLLHIVGHGDFQMNQIDAPVDPFPLNPRVIKSQKKP 335

Query: 342 ---MEQDAMDT-----HDVEVIQLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRN 401
              ME    D       D++V+   +P  QE L  E  PDP+ GEQTWPTE +  EAD  
Sbjct: 336 NMAMEVCVTDAAPDMEEDLKVLMKADPDHQESLQTEAIPDPMEGEQTWPTEEELDEADDL 395

Query: 402 QKEKHLRKRALAHGTSEYQEAWEIGDTDDEDSDVDNESDGMMLDSGYTNEVDDLNNPCLS 461
            K++    + +  GTS YQ  W + + D+ D +   E D +  +     E  D +     
Sbjct: 396 LKQRSRVVKKVPKGTSSYQAEWILDEGDESDGE-GGEYDDIQHEGFMEEESQDGSGE--E 455

Query: 462 DDDQASFELINSDHETDMDSVMMDGENLTNEQKLDEIQKIKNAHADDEEFPDEVDTPMDI 521
           ++++     +      D+    +D E   +E+++  ++K K     +E FPDE+DTP D+
Sbjct: 456 EEEECETMTLGESVRDDLYDEKVDAE---DEERM--LEKYKQERL-EEMFPDEMDTPRDV 515

Query: 522 PARKRFAKYRGLKSFRTSSWDPQESLPQDYSRIFEFSNISRTQKHVLAKALELEQGNRDD 581
            AR RF KYRGLKSFRTS WDP+E+LP+DY+RIF+F N   T+K +  +  E E    + 
Sbjct: 516 AARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFVNTRKRIFKEIEEKEAEGAE- 575

Query: 582 CVASSSYLRLHVKEVPIGAASKLCELAKSMPITACGLLQHESKMSVLHFSIKMHDVSEEI 641
                 Y+ LHV +VP+          +  P+ A  LL +E KMSVL+           +
Sbjct: 576 ---VGWYVTLHVSDVPVSVVE---YFRQGAPLIAFSLLPYEQKMSVLNM---------VV 635

Query: 642 SDNVGTTQNSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNFNSDKHKMERFLHAG 701
           S N G T+          P+K KE+L+FH GFR+F   P+F S +  +DKHK +RFL A 
Sbjct: 636 SRNPGNTE----------PVKAKEELIFHCGFRRFRASPLF-SQHTAADKHKFQRFLTAD 695

Query: 702 RFSIASIYAPISFAPLPLIVLR-NVEGISSFAASGSLKCIDPRRIILKKIILSGYPQRVS 761
              + +++API+F P  +++ +    G+ S  A+G L  +DP R+++K+++LSG+P ++ 
Sbjct: 696 AAFVVTVFAPITFPPASVLLFKQRRNGMHSLIATGHLFSVDPDRMVIKRVVLSGHPFKIF 755

Query: 762 KLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCIFNGVLQQHDTVCM 805
              A VRYMF N +DV WFKPV++ TK GRRG +KEP+GTHG MKC F+G L+  DTV M
Sbjct: 756 TKMAVVRYMFFNREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLM 776

[Close]
BLAST of Cp4.1LG17g09620 vs. ExPASy Swiss-Prot
Match: Q9VP47 (Pre-rRNA-processing protein TSR1 homolog OS=Drosophila melanogaster OX=7227 GN=Tsr1 PE=1 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.9e-106
Identity = 264/771 (34.24%), Postives = 403/771 (52.27%), Query Frame = 0 

Query: 64  QRNKM--IREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVDLNPLAEDLLS----LLA 123
           +RN+M  +R+ KR  VL+ KR   G    P ++ L  +   +D     E L S    L+ 
Sbjct: 56  RRNQMNQLRKNKREEVLEQKRKLGGQNTAPFLVCLLPMHEQIDPMSALEILKSCDSELVV 115

Query: 124 PGSSSSTVASS--EYKLRATVLKAPY--GDLQSCMEMAKVADLIAFVTSASYYIEGSTSL 183
             S S  V  +   +K R   +  P   G+    ++  KV D    +T+A++   G   +
Sbjct: 116 ENSPSGIVYINLPRFKQRFAFVTPPVGRGNELIALDYLKVCDTTLLLTTAAF---GDDEI 175

Query: 184 YIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPAD 243
           + D +G    +++ + G+P+  V + DL +   KR    K     + S+   + K    D
Sbjct: 176 F-DRWGQRIFNMMSAQGIPTPVVALMDLESINPKRRPAAKQAAQKVISKLLPEEKIMQLD 235

Query: 244 TKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKC-TLLLTGYLRARSL 303
           T  E    M     Q+  + H    RP+L    V+    +  S    TL +TG+LR +SL
Sbjct: 236 TASEALNVMRRIGGQKKRILHNVANRPHLFGDVVEFKPGSDPSDDLGTLEVTGFLRGQSL 295

Query: 304 SVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSEQEPLVVEN 363
           +VN LVH+ G GDFQL ++    DP  L+   +    +  +V ++   +PS++  L  EN
Sbjct: 296 NVNGLVHIPGLGDFQLSQVVAPPDPYKLDKSRDG---ENSEVRLLDRSDPSKRTSLQSEN 355

Query: 364 DPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAW-----EIGDTDDEDS 423
            PDP+  EQTWPTE + A +    K+  L KR +  G SEYQ AW     E+ D D +D 
Sbjct: 356 IPDPMDAEQTWPTEDEIAASQAETKKMKLVKR-VPKGYSEYQAAWIPDVEEVEDPDGKDD 415

Query: 424 DVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQA---SFELINSDHETDMDSVMMDGENLT 483
           D  +E D         ++ +D N   +S D+++    +E  +SD E   D+V +  E   
Sbjct: 416 DDMSEDD--------DDDKEDDNEDFMSCDNKSFEDEYEKRDSDTEEFQDTVSVASEAAI 475

Query: 484 NEQKLDE----------IQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSS 543
           N++K D+          ++K++ A   D+ +PDE+DTP+D+PAR+RF KYRGL+SFRTS 
Sbjct: 476 NDEKYDQQMDFQEERETLKKLQQART-DQLWPDEIDTPLDVPARERFQKYRGLESFRTSP 535

Query: 544 WDPQESLPQDYSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGA 603
           WD +E+LP DY+RI++F N  RT++ +L +A E E       V    Y+ L+V  VP   
Sbjct: 536 WDAKENLPADYARIYQFQNFDRTKRRILNEAKEFEG------VLPGLYVTLYVINVPESR 595

Query: 604 ASKLCELAKSMPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHP 663
            +          I   G+L HE +M V++  ++    SE                    P
Sbjct: 596 WNAFKSAQLMDNIIVYGMLPHEHQMCVMNVVLQRMPDSEV-------------------P 655

Query: 664 LKGKEKLVFHVGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLI 723
           LK KE+L+   G+R+FV  PI+ S + N DKHK ER+        A+ YAPI F P P++
Sbjct: 656 LKSKEQLIIQCGYRRFVVNPIY-SQHTNGDKHKFERYFRPYETVCATFYAPIQFPPAPVL 715

Query: 724 VLR-NVEGISSFAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWF 783
             + N +   +  A G L   +P RI+LK+++LSG+P R+++  A++RYMF   +DV +F
Sbjct: 716 AFKVNPDSTLALVARGRLLSCNPDRIVLKRVVLSGHPMRINRKSASIRYMFFYKEDVEYF 775

Query: 784 KPVDVWTKCGRRGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKW 805
           KPV + TKCGR G +KE +GTHG MKC F+G L+ +DT  M LYKRV+PKW
Sbjct: 776 KPVKLRTKCGRLGHIKESLGTHGHMKCYFDGQLRSYDTAFMYLYKRVFPKW 783

[Close]
BLAST of Cp4.1LG17g09620 vs. NCBI nr
Match: XP_023513549.1 (pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023513550.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023513551.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1524 bits (3947), Expect = 0.0
Identity = 770/770 (100.00%), Postives = 770/770 (100.00%), Query Frame = 0 

Query: 45  DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 104
           DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD
Sbjct: 31  DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 90

Query: 105 LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 164
           LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS
Sbjct: 91  LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 150

Query: 165 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 224
           YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP
Sbjct: 151 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 210

Query: 225 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 284
           EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT
Sbjct: 211 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 270

Query: 285 GYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSE 344
           GYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSE
Sbjct: 271 GYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSE 330

Query: 345 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 404
           QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD
Sbjct: 331 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 390

Query: 405 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT 464
           EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT
Sbjct: 391 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT 450

Query: 465 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 524
           NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD
Sbjct: 451 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 510

Query: 525 YSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 584
           YSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS
Sbjct: 511 YSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 570

Query: 585 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 644
           MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH
Sbjct: 571 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 630

Query: 645 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 704
           VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS
Sbjct: 631 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 690

Query: 705 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 764
           FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR
Sbjct: 691 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 750

Query: 765 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 814
           RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV
Sbjct: 751 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 800

[Close]
BLAST of Cp4.1LG17g09620 vs. NCBI nr
Match: XP_023004943.1 (pre-rRNA-processing protein TSR1 homolog [Cucurbita maxima] >XP_023004944.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita maxima])

HSP 1 Score: 1520 bits (3935), Expect = 0.0
Identity = 765/770 (99.35%), Postives = 770/770 (100.00%), Query Frame = 0 

Query: 45  DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 104
           DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD
Sbjct: 31  DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 90

Query: 105 LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 164
           LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS
Sbjct: 91  LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 150

Query: 165 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 224
           YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP
Sbjct: 151 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 210

Query: 225 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 284
           EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT
Sbjct: 211 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 270

Query: 285 GYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSE 344
           GYLRARSLSVNQLVHVAGAGDFQLC+IEVLKDPVPLNPRMEQDAMDTHDVEV+QLLEPSE
Sbjct: 271 GYLRARSLSVNQLVHVAGAGDFQLCRIEVLKDPVPLNPRMEQDAMDTHDVEVVQLLEPSE 330

Query: 345 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 404
           QEPLVVENDPDPLSGEQTWPTEADRAEADRNQ+EKHLRKRALAHGTSEYQEAWEIGDTDD
Sbjct: 331 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQREKHLRKRALAHGTSEYQEAWEIGDTDD 390

Query: 405 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT 464
           EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT
Sbjct: 391 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT 450

Query: 465 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 524
           NEQK+DEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD
Sbjct: 451 NEQKMDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 510

Query: 525 YSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 584
           Y+RIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS
Sbjct: 511 YARIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 570

Query: 585 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 644
           MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH
Sbjct: 571 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 630

Query: 645 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 704
           VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS
Sbjct: 631 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 690

Query: 705 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 764
           FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR
Sbjct: 691 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 750

Query: 765 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 814
           RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV
Sbjct: 751 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 800

[Close]
BLAST of Cp4.1LG17g09620 vs. NCBI nr
Match: KAG6592850.1 (Pre-rRNA-processing protein TSR1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1519 bits (3933), Expect = 0.0
Identity = 765/770 (99.35%), Postives = 770/770 (100.00%), Query Frame = 0 

Query: 45  DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 104
           DR+KVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD
Sbjct: 31  DRNKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 90

Query: 105 LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 164
           LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS
Sbjct: 91  LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 150

Query: 165 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 224
           YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP
Sbjct: 151 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 210

Query: 225 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 284
           EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT
Sbjct: 211 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 270

Query: 285 GYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSE 344
           GYLRARSLSVNQLVHVAGAGDFQLC+IEVLKDPVPLNPRMEQDAMDTHDVEV+QLLEPSE
Sbjct: 271 GYLRARSLSVNQLVHVAGAGDFQLCRIEVLKDPVPLNPRMEQDAMDTHDVEVVQLLEPSE 330

Query: 345 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 404
           QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD
Sbjct: 331 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 390

Query: 405 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT 464
           EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETD+DSVMMDGENLT
Sbjct: 391 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDIDSVMMDGENLT 450

Query: 465 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 524
           NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD
Sbjct: 451 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 510

Query: 525 YSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 584
           Y+RIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS
Sbjct: 511 YARIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 570

Query: 585 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 644
           MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH
Sbjct: 571 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 630

Query: 645 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 704
           VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS
Sbjct: 631 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 690

Query: 705 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 764
           FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR
Sbjct: 691 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 750

Query: 765 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 814
           RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV
Sbjct: 751 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 800

[Close]
BLAST of Cp4.1LG17g09620 vs. NCBI nr
Match: XP_022960248.1 (pre-rRNA-processing protein TSR1 homolog [Cucurbita moschata])

HSP 1 Score: 1512 bits (3914), Expect = 0.0
Identity = 763/770 (99.09%), Postives = 766/770 (99.48%), Query Frame = 0 

Query: 45  DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 104
           DRSKVT NNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD
Sbjct: 31  DRSKVTTNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 90

Query: 105 LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 164
           LNPLAEDLLSLLA GSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS
Sbjct: 91  LNPLAEDLLSLLASGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 150

Query: 165 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 224
           YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP
Sbjct: 151 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 210

Query: 225 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 284
           EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT
Sbjct: 211 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 270

Query: 285 GYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSE 344
           GYLRARSLSVNQLVHVAGAGDFQLC+IEVLKDPVPLNPR EQDAMDTHDVEV+QLLEPSE
Sbjct: 271 GYLRARSLSVNQLVHVAGAGDFQLCRIEVLKDPVPLNPRTEQDAMDTHDVEVVQLLEPSE 330

Query: 345 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 404
           QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD
Sbjct: 331 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 390

Query: 405 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT 464
           EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQAS ELINSDHETDMDSVMMDGENLT
Sbjct: 391 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASLELINSDHETDMDSVMMDGENLT 450

Query: 465 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 524
           NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD
Sbjct: 451 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 510

Query: 525 YSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 584
           Y+RIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS
Sbjct: 511 YARIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 570

Query: 585 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 644
           MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH
Sbjct: 571 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 630

Query: 645 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 704
           VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS
Sbjct: 631 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 690

Query: 705 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 764
           FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR
Sbjct: 691 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 750

Query: 765 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 814
           RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV
Sbjct: 751 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 800

[Close]
BLAST of Cp4.1LG17g09620 vs. NCBI nr
Match: XP_023547507.1 (pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023547508.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1429 bits (3698), Expect = 0.0
Identity = 716/770 (92.99%), Postives = 746/770 (96.88%), Query Frame = 0 

Query: 44  SDRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASV 103
           +DRSKVTKNNVAKGARAARLQR+KMIREQKRAAVLQDKRA SGSK+PPRVIVL GLSASV
Sbjct: 30  TDRSKVTKNNVAKGARAARLQRSKMIREQKRAAVLQDKRALSGSKSPPRVIVLLGLSASV 89

Query: 104 DLNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSA 163
           DLNPLAEDLLSLL+PG+SSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFV SA
Sbjct: 90  DLNPLAEDLLSLLSPGASSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVVSA 149

Query: 164 SYYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEF 223
           SYYIEGSTSLYI+SFGSECLS+LRSLGLPSTAV IRDLPTDIKKRNDYKKMCISSITSEF
Sbjct: 150 SYYIEGSTSLYINSFGSECLSVLRSLGLPSTAVLIRDLPTDIKKRNDYKKMCISSITSEF 209

Query: 224 PEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLL 283
           PEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCT GKCTLLL
Sbjct: 210 PEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPGKCTLLL 269

Query: 284 TGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPS 343
           TGYLRARSLSVNQLVHVAGAGDFQLCKIE+LKDPVPLNPR+EQD+MDT D EV++LLEPS
Sbjct: 270 TGYLRARSLSVNQLVHVAGAGDFQLCKIEILKDPVPLNPRIEQDSMDTQDEEVVRLLEPS 329

Query: 344 EQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTD 403
           EQEPLVVEN+ DPLSGEQTWPTEADRAEADR+QKEKHLRKRALAHGTS+YQEAWEIGDTD
Sbjct: 330 EQEPLVVENELDPLSGEQTWPTEADRAEADRSQKEKHLRKRALAHGTSDYQEAWEIGDTD 389

Query: 404 DEDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENL 463
           DEDSD DNESDGM+LDSGYTNEVDDLNNP LSDDDQASFELINSD ETDMDSVMMDG+NL
Sbjct: 390 DEDSDFDNESDGMILDSGYTNEVDDLNNPGLSDDDQASFELINSDQETDMDSVMMDGDNL 449

Query: 464 TNEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQ 523
           TNEQ+LDE QKIKNAHA+DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQ
Sbjct: 450 TNEQRLDEFQKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQ 509

Query: 524 DYSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAK 583
           DY+RIFEFSNISRTQKHVLAKALE E GNRDDCVASSSYLRLHVKEVP+GAASKLCEL K
Sbjct: 510 DYARIFEFSNISRTQKHVLAKALEREHGNRDDCVASSSYLRLHVKEVPVGAASKLCELTK 569

Query: 584 SMPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVF 643
           SMPITACGLL+HESKMSVLHFSIK HDVSE ISD VGTT+++KKHDK S P+KGKEKLVF
Sbjct: 570 SMPITACGLLRHESKMSVLHFSIKKHDVSEVISDKVGTTEDTKKHDKNSPPIKGKEKLVF 629

Query: 644 HVGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGIS 703
           HVGFRQFVTRPIFS+DNFNSDKHKMERFLHAGRFSIASIYAP+SFAPLPLIVLR VEGIS
Sbjct: 630 HVGFRQFVTRPIFSTDNFNSDKHKMERFLHAGRFSIASIYAPVSFAPLPLIVLRTVEGIS 689

Query: 704 SFAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCG 763
           SFAASGSLK IDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCG
Sbjct: 690 SFAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCG 749

Query: 764 RRGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 813
           RRGR+KEPVGTHG MKC+ NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD
Sbjct: 750 RRGRIKEPVGTHGVMKCVLNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 799

[Close]
BLAST of Cp4.1LG17g09620 vs. ExPASy TrEMBL
Match: A0A6J1L0W3 (pre-rRNA-processing protein TSR1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498098 PE=4 SV=1)

HSP 1 Score: 1520 bits (3935), Expect = 0.0
Identity = 765/770 (99.35%), Postives = 770/770 (100.00%), Query Frame = 0 

Query: 45  DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 104
           DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD
Sbjct: 31  DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 90

Query: 105 LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 164
           LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS
Sbjct: 91  LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 150

Query: 165 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 224
           YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP
Sbjct: 151 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 210

Query: 225 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 284
           EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT
Sbjct: 211 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 270

Query: 285 GYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSE 344
           GYLRARSLSVNQLVHVAGAGDFQLC+IEVLKDPVPLNPRMEQDAMDTHDVEV+QLLEPSE
Sbjct: 271 GYLRARSLSVNQLVHVAGAGDFQLCRIEVLKDPVPLNPRMEQDAMDTHDVEVVQLLEPSE 330

Query: 345 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 404
           QEPLVVENDPDPLSGEQTWPTEADRAEADRNQ+EKHLRKRALAHGTSEYQEAWEIGDTDD
Sbjct: 331 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQREKHLRKRALAHGTSEYQEAWEIGDTDD 390

Query: 405 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT 464
           EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT
Sbjct: 391 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT 450

Query: 465 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 524
           NEQK+DEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD
Sbjct: 451 NEQKMDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 510

Query: 525 YSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 584
           Y+RIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS
Sbjct: 511 YARIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 570

Query: 585 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 644
           MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH
Sbjct: 571 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 630

Query: 645 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 704
           VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS
Sbjct: 631 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 690

Query: 705 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 764
           FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR
Sbjct: 691 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 750

Query: 765 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 814
           RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV
Sbjct: 751 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 800

[Close]
BLAST of Cp4.1LG17g09620 vs. ExPASy TrEMBL
Match: A0A6J1H8A7 (pre-rRNA-processing protein TSR1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461047 PE=4 SV=1)

HSP 1 Score: 1512 bits (3914), Expect = 0.0
Identity = 763/770 (99.09%), Postives = 766/770 (99.48%), Query Frame = 0 

Query: 45  DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 104
           DRSKVT NNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD
Sbjct: 31  DRSKVTTNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 90

Query: 105 LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 164
           LNPLAEDLLSLLA GSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS
Sbjct: 91  LNPLAEDLLSLLASGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 150

Query: 165 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 224
           YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP
Sbjct: 151 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 210

Query: 225 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 284
           EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT
Sbjct: 211 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 270

Query: 285 GYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSE 344
           GYLRARSLSVNQLVHVAGAGDFQLC+IEVLKDPVPLNPR EQDAMDTHDVEV+QLLEPSE
Sbjct: 271 GYLRARSLSVNQLVHVAGAGDFQLCRIEVLKDPVPLNPRTEQDAMDTHDVEVVQLLEPSE 330

Query: 345 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 404
           QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD
Sbjct: 331 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 390

Query: 405 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT 464
           EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQAS ELINSDHETDMDSVMMDGENLT
Sbjct: 391 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASLELINSDHETDMDSVMMDGENLT 450

Query: 465 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 524
           NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD
Sbjct: 451 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 510

Query: 525 YSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 584
           Y+RIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS
Sbjct: 511 YARIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 570

Query: 585 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 644
           MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH
Sbjct: 571 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 630

Query: 645 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 704
           VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS
Sbjct: 631 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 690

Query: 705 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 764
           FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR
Sbjct: 691 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 750

Query: 765 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 814
           RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV
Sbjct: 751 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLDV 800

[Close]
BLAST of Cp4.1LG17g09620 vs. ExPASy TrEMBL
Match: A0A5A7T9F0 (Pre-rRNA-processing protein TSR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001780 PE=4 SV=1)

HSP 1 Score: 1401 bits (3627), Expect = 0.0
Identity = 708/769 (92.07%), Postives = 738/769 (95.97%), Query Frame = 0 

Query: 45  DRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASVD 104
           DRSKVTKNNVAKGARAARLQR+KMIREQKRAAVLQDKRA SGSK+PPRVIVLF LSASVD
Sbjct: 31  DRSKVTKNNVAKGARAARLQRSKMIREQKRAAVLQDKRALSGSKSPPRVIVLFRLSASVD 90

Query: 105 LNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSAS 164
           LNPLAEDLLSLLAPG+SSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFV SAS
Sbjct: 91  LNPLAEDLLSLLAPGASSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVASAS 150

Query: 165 YYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEFP 224
           YYIEGSTSLYIDSFGSECLS+LRSLGLPSTAV IRDLPTDIKK+NDYKKMCISSI+SEFP
Sbjct: 151 YYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDIKKKNDYKKMCISSISSEFP 210

Query: 225 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLT 284
           EDCKFYPADTKDELHKFMWLFKEQRLTVPHWR QRPYLMSQKVDMVADNCT G+CTLLLT
Sbjct: 211 EDCKFYPADTKDELHKFMWLFKEQRLTVPHWRTQRPYLMSQKVDMVADNCTPGRCTLLLT 270

Query: 285 GYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPSE 344
           GYLRARSLSVNQLVHVAGAGDFQL KIEVLKDPVPLNPR EQDAMDT D E+I+LLEPSE
Sbjct: 271 GYLRARSLSVNQLVHVAGAGDFQLSKIEVLKDPVPLNPRTEQDAMDTQDDEIIRLLEPSE 330

Query: 345 QEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDD 404
            EPLVVEN+PDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGD++D
Sbjct: 331 HEPLVVENEPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDSED 390

Query: 405 EDSDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLT 464
           EDSDVDNE+DGMMLDS YTNEV+DLNN  +SDDDQAS E  NSD ETDMDSVM+DGE +T
Sbjct: 391 EDSDVDNETDGMMLDSSYTNEVNDLNNQGISDDDQASLEFENSDQETDMDSVMLDGE-MT 450

Query: 465 NEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQD 524
           NEQKLDEIQKIKNAHA+DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTS+WDPQESLPQD
Sbjct: 451 NEQKLDEIQKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSTWDPQESLPQD 510

Query: 525 YSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAKS 584
           Y+RIFEF+NISRTQKHVLAKALE+EQGN D CVAS SYLRLHVKEVP+GAASKLCELAKS
Sbjct: 511 YARIFEFNNISRTQKHVLAKALEIEQGNCDHCVASGSYLRLHVKEVPVGAASKLCELAKS 570

Query: 585 MPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFH 644
           MPITACGLLQHESKMSVLHFSIK HDVSEEISD VGTT+N+K  DK S PLKGKEKLVFH
Sbjct: 571 MPITACGLLQHESKMSVLHFSIKKHDVSEEISDKVGTTENAKMPDKNSPPLKGKEKLVFH 630

Query: 645 VGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGISS 704
           VGFRQFVTRPIFS+DNFNSDKHKMERFLH GRFSIASIYAPISFAPLPLIVLR+VEG +S
Sbjct: 631 VGFRQFVTRPIFSTDNFNSDKHKMERFLHGGRFSIASIYAPISFAPLPLIVLRSVEGNAS 690

Query: 705 FAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 764
           FAASGSLK IDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR
Sbjct: 691 FAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGR 750

Query: 765 RGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 813
           RGR+KEPVGTHGAMKC+FNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD
Sbjct: 751 RGRIKEPVGTHGAMKCVFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 798

[Close]
BLAST of Cp4.1LG17g09620 vs. ExPASy TrEMBL
Match: A0A6J1GPU5 (LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456021 PE=4 SV=1)

HSP 1 Score: 1384 bits (3582), Expect = 0.0
Identity = 701/771 (90.92%), Postives = 731/771 (94.81%), Query Frame = 0 

Query: 44  SDRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLSASV 103
           +DRSKVTKNNVAKGARAARLQ + MIREQKRAAVLQDKRA SGSK+PPRVIVL GLSASV
Sbjct: 30  TDRSKVTKNNVAKGARAARLQHSNMIREQKRAAVLQDKRALSGSKSPPRVIVLLGLSASV 89

Query: 104 DLNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFVTSA 163
           DLNPLAEDLLSLL PG+SSSTVASSEYKLRATVLKAPY DLQSC EMAKVADLIAFV SA
Sbjct: 90  DLNPLAEDLLSLLTPGASSSTVASSEYKLRATVLKAPYSDLQSCNEMAKVADLIAFVVSA 149

Query: 164 SYYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSITSEF 223
           SYYIEGSTSLYIDSFGSECLS+LRSLGLPSTAV IRDLPTDIKKRNDYKK CISSITSEF
Sbjct: 150 SYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDIKKRNDYKKTCISSITSEF 209

Query: 224 PEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCTLLL 283
           PEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCT GKCTLLL
Sbjct: 210 PEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPGKCTLLL 269

Query: 284 TGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLLEPS 343
           TGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPR+EQD+MDT D EV++LLEPS
Sbjct: 270 TGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRIEQDSMDTQDEEVVRLLEPS 329

Query: 344 EQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTD 403
           EQEPLVVEN+ DPL    TWPTEADRAEADR+QKEKHL+K+ALAHGTS+YQEAWEIG TD
Sbjct: 330 EQEPLVVENELDPL----TWPTEADRAEADRSQKEKHLKKKALAHGTSDYQEAWEIGGTD 389

Query: 404 DED-SDVDNESDGMMLDSGYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGEN 463
           DED S+VDNESD M+LDSGYTNE+DDLNNP LSDDDQASFELINSD ETDMDSVMMDG+N
Sbjct: 390 DEDDSNVDNESDRMILDSGYTNEMDDLNNPGLSDDDQASFELINSDQETDMDSVMMDGDN 449

Query: 464 LTNEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLP 523
           LTNEQ+LDE +KIKNAHA+DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLP
Sbjct: 450 LTNEQRLDEFRKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLP 509

Query: 524 QDYSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELA 583
           QDY+RIFEFSNISRTQKHVLAKALE E GNRDDCVAS SYLRLHV EVP+ AASKLCEL 
Sbjct: 510 QDYARIFEFSNISRTQKHVLAKALERENGNRDDCVASCSYLRLHVNEVPVCAASKLCELT 569

Query: 584 KSMPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLV 643
           KSMPITACGLL HESKMSVLHFSIK HDVSE+ISD VGTT+N+KKHDK S PL GKEKLV
Sbjct: 570 KSMPITACGLLPHESKMSVLHFSIKKHDVSEQISDKVGTTENTKKHDKNSPPLMGKEKLV 629

Query: 644 FHVGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGI 703
           FHVGFRQFVTRPIFS+DNFNSDKHKMERFLHAGRFSIASI AP+SFAPLPLIVLRNVEGI
Sbjct: 630 FHVGFRQFVTRPIFSTDNFNSDKHKMERFLHAGRFSIASINAPVSFAPLPLIVLRNVEGI 689

Query: 704 SSFAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKC 763
           SSFAASGSLK IDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKC
Sbjct: 690 SSFAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKC 749

Query: 764 GRRGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 813
           GRRGR+KEPVGTHG MKC+ NGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD
Sbjct: 750 GRRGRIKEPVGTHGVMKCVLNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 796

[Close]
BLAST of Cp4.1LG17g09620 vs. ExPASy TrEMBL
Match: A0A6J1DWQ9 (pre-rRNA-processing protein TSR1 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024201 PE=4 SV=1)

HSP 1 Score: 1371 bits (3549), Expect = 0.0
Identity = 689/774 (89.02%), Postives = 732/774 (94.57%), Query Frame = 0 

Query: 41  FGPSDRSKVTKNNVAKGARAARLQRNKMIREQKRAAVLQDKRASSGSKNPPRVIVLFGLS 100
           FG SD+ KVTKN+VAKGARAAR QR+KMIREQKR AVLQDKRA SGS++PPRVIVLF LS
Sbjct: 32  FGLSDKCKVTKNSVAKGARAARHQRSKMIREQKRTAVLQDKRALSGSRSPPRVIVLFALS 91

Query: 101 ASVDLNPLAEDLLSLLAPGSSSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFV 160
           ASVDLNPLAEDLLSLL+PG+SSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFV
Sbjct: 92  ASVDLNPLAEDLLSLLSPGASSSTVASSEYKLRATVLKAPYGDLQSCMEMAKVADLIAFV 151

Query: 161 TSASYYIEGSTSLYIDSFGSECLSLLRSLGLPSTAVFIRDLPTDIKKRNDYKKMCISSIT 220
            SASYYIEGSTSLYIDSFGSECLSLLRSLGLPST V +RDLPTDIKKRND+KKMCISSI 
Sbjct: 152 ASASYYIEGSTSLYIDSFGSECLSLLRSLGLPSTVVLVRDLPTDIKKRNDFKKMCISSIA 211

Query: 221 SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCT 280
           SEFPEDCKF+PADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVD+VADNCT GKCT
Sbjct: 212 SEFPEDCKFHPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDVVADNCTPGKCT 271

Query: 281 LLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLL 340
           LLLTGYLR+R LSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPR+EQDAMDT+D+EV++ L
Sbjct: 272 LLLTGYLRSRCLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRIEQDAMDTNDMEVVRSL 331

Query: 341 EPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIG 400
           +PSEQEPLVVENDPDPLSGEQTWPTEADRAEADRN+KEK LR+ ALA GTS+YQ+AW IG
Sbjct: 332 DPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNKKEKRLRRTALADGTSDYQDAWRIG 391

Query: 401 DTDDEDSDVDNESDGMMLDS-GYTNEVDDLNNPCLSDDDQASFELINSDHETDMDSVMMD 460
           +TDDEDSDVDN+SDGMMLD  GY N  DDLNNP +SDDDQAS EL NSD ETDM SVMMD
Sbjct: 392 ETDDEDSDVDNDSDGMMLDGEGYPNVEDDLNNPGISDDDQASLEL-NSDQETDMASVMMD 451

Query: 461 GENLTNEQKLDEIQKIKNAHADDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQE 520
            E+LTNEQKL+EIQKIKNAHA+DEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQE
Sbjct: 452 CEDLTNEQKLEEIQKIKNAHAEDEEFPDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQE 511

Query: 521 SLPQDYSRIFEFSNISRTQKHVLAKALELEQGNRDDCVASSSYLRLHVKEVPIGAASKLC 580
           SLPQ+Y+RIFEF+NISRTQKHVLAKALE+EQGNRDDCVA  SYLRLHVKEVP+  ASKLC
Sbjct: 512 SLPQEYARIFEFNNISRTQKHVLAKALEIEQGNRDDCVAPCSYLRLHVKEVPVAVASKLC 571

Query: 581 ELAKSMPITACGLLQHESKMSVLHFSIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKE 640
           ELAK+MP+TACGLLQHESKMSVLHFSIK HD SEE S+ VGT QN+KKHDK S PLKGKE
Sbjct: 572 ELAKAMPVTACGLLQHESKMSVLHFSIKRHDASEETSNKVGTVQNTKKHDKNSPPLKGKE 631

Query: 641 KLVFHVGFRQFVTRPIFSSDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNV 700
           KLVFHVGFRQFVT+PIFS+DNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLR V
Sbjct: 632 KLVFHVGFRQFVTKPIFSTDNFNSDKHKMERFLHAGRFSIASIYAPISFAPLPLIVLRTV 691

Query: 701 EGISSFAASGSLKCIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVW 760
           EG+SSFAASGSLK IDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVW
Sbjct: 692 EGVSSFAASGSLKSIDPRRIILKKIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVW 751

Query: 761 TKCGRRGRVKEPVGTHGAMKCIFNGVLQQHDTVCMSLYKRVYPKWPEHLFPLLD 813
           TKCGRRGR+KEPVGTHGAMKC+ NGVLQQHDTVCMSLYKRV+PKWPEHLFPLLD
Sbjct: 752 TKCGRRGRIKEPVGTHGAMKCVLNGVLQQHDTVCMSLYKRVFPKWPEHLFPLLD 804

[Close]
BLAST of Cp4.1LG17g09620 vs. TAIR 10
Match: AT1G42440.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088 proteins in 291 species: Archae - 2; Bacteria - 131; Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49; Other Eukaryotes - 905 (source: NCBI BLink). )

HSP 1 Score: 989.6 bits (2557), Expect = 1.5e-288
Identity = 517/810 (63.83%), Postives = 636/810 (78.52%), Query Frame = 0 

Query: 15  INHASRPRQRDNNTKPLLKLLVSNLSFGPSDRSKVTKNNVAKGARAARLQRNKMIREQKR 74
           +N A + R    +++ L +   +NL    S R   + +N  KGA+AAR+QR KM+REQKR
Sbjct: 8   VNKAHKTRFSSKSSRNLHR---TNLQ--DSGRIGKSDSNYVKGAKAARVQRGKMLREQKR 67

Query: 75  AAVLQDKRASSGSKNPPRVIVLFGLSASVDLNPLAEDLLSLLA---PGSSSSTVASSEYK 134
           AAVL++KRAS G  + PRVIVLF LSASV+LN L ED+L LL+    G +SSTVASSEYK
Sbjct: 68  AAVLKEKRASGGINSAPRVIVLFPLSASVELNSLGEDVLKLLSSDGSGIASSTVASSEYK 127

Query: 135 LRATVLKAPYGDLQSCMEMAKVADLIAFVTSASYYIEGSTSLYIDSFGSECLSLLRSLGL 194
           LRATVLKAP+GDL +CMEMAKVADL+AFV SAS   E ++S +IDSFGS+CLS+ RS+GL
Sbjct: 128 LRATVLKAPHGDLLTCMEMAKVADLMAFVASASAPWEENSSNFIDSFGSQCLSVFRSIGL 187

Query: 195 PSTAVFIRDLPTDIKKRNDYKKMCISSITSEFPEDCKFYPADTKDELHKFMWLFKEQRLT 254
           PST V IRDLP+D+KK+N+ KKMC S + SEFPEDCKFYPADT+DELHKFMWLFK QRLT
Sbjct: 188 PSTTVLIRDLPSDVKKKNEMKKMCASQLASEFPEDCKFYPADTRDELHKFMWLFKAQRLT 247

Query: 255 VPHWRNQRPYLMSQKVDMVADNCTSGKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLCKI 314
           VPHWR+QR Y++++K  M+ D+ +SGKCTLLL+GYLRAR LSVNQLVHV+G GDFQ  KI
Sbjct: 248 VPHWRSQRSYIVARKAGMLVDDESSGKCTLLLSGYLRARKLSVNQLVHVSGVGDFQFSKI 307

Query: 315 EVLKDPVPLNPRMEQDAM---DTHDVEVIQLL--EPSEQEPLVVENDPDPLSGEQTWPTE 374
           EVLKDP PLN R  Q++M   D+HD EV++ L  +P +QEPLV+EN PDPL+GEQTWPTE
Sbjct: 308 EVLKDPFPLNERKNQNSMELDDSHDEEVLKSLVPDPMKQEPLVIENTPDPLAGEQTWPTE 367

Query: 375 ADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIGDTDDEDSD-VDNESDGMMLDSGYTNE 434
            + AEAD+NQK+  L+K+ L  GTSEYQ AW + +TD+EDSD  D++ +GM+LD G  + 
Sbjct: 368 EEMAEADKNQKQGRLKKKTLPRGTSEYQAAWIVDETDEEDSDNGDSDDNGMVLDRGEDSN 427

Query: 435 VDDLNNPCLSDDDQASFELINSDHETDMDSVMMDGENLTNEQKLDEIQKIKNAHADDEEF 494
            + + +    DD + S  L + D ET  +S M+D E+LT EQ  DEI+KIK A+ADDEEF
Sbjct: 428 QEGMYDQEFEDDGK-SLNLRDIDTETQNESEMVDDEDLTEEQIKDEIKKIKEAYADDEEF 487

Query: 495 PDEVDTPMDIPARKRFAKYRGLKSFRTSSWDPQESLPQDYSRIFEFSNISRTQKHVLAKA 554
           PDEV+TP+D+PAR+RFAKYRGLKSFRTSSWDP ESLPQDY+RIF F N++RTQK VL +A
Sbjct: 488 PDEVETPIDVPARRRFAKYRGLKSFRTSSWDPNESLPQDYARIFAFDNVARTQKLVLKQA 547

Query: 555 LELEQGNRDDCVASSSYLRLHVKEVPIGAASKLCELAK-SMPITACGLLQHESKMSVLHF 614
           L++E+ +RDDCV   SY+RLH+KEVP+GAASKL  L   + PI   GLLQHESKMSVLHF
Sbjct: 548 LKMEEEDRDDCVPIGSYVRLHIKEVPLGAASKLSSLVNTTKPIIGFGLLQHESKMSVLHF 607

Query: 615 SIKMHDVSEEISDNVGTTQNSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNFNSD 674
           S+                   KK+D    P+K KE+L+FHVGFRQF+ RP+F++DNF+SD
Sbjct: 608 SV-------------------KKYDGYEAPIKTKEELMFHVGFRQFIARPVFATDNFSSD 667

Query: 675 KHKMERFLHAGRFSIASIYAPISFAPLPLIVLRNVEGIS--SFAASGSLKCIDPRRIILK 734
           KHKMERFLH G FS+ASIY PISF PLPL+VL+  EG    + AA GSLK ++P +IILK
Sbjct: 668 KHKMERFLHPGCFSLASIYGPISFPPLPLVVLKISEGSDPPAIAALGSLKSVEPNKIILK 727

Query: 735 KIILSGYPQRVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVKEPVGTHGAMKCIF 794
           KIIL+GYPQRVSK+KA+VRYMFHNP+DV+WFKPV+VW+KCGRRGRVKEPVGTHGAMKCIF
Sbjct: 728 KIILTGYPQRVSKMKASVRYMFHNPEDVKWFKPVEVWSKCGRRGRVKEPVGTHGAMKCIF 787

Query: 795 NGVLQQHDTVCMSLYKRVYPKWPEHLFPLL 813
           NGV+QQHD VCM+LYKR YPKWPE L+P L
Sbjct: 788 NGVVQQHDVVCMNLYKRAYPKWPERLYPQL 792

[Close]
BLAST of Cp4.1LG17g09620 vs. TAIR 10
Match: AT1G06720.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 2.3e-10
Identity = 52/196 (26.53%), Postives = 90/196 (45.92%), Query Frame = 0 

Query: 617 DNVGTTQ-NSKKHDKKSHPLKGKEKLVFHVGFRQFVTRPIFSSDNFNSDKHKMERFLHAG 676
           DNVG  Q   KKH      LK ++ ++  +G+R++ T P+F+ ++ N  +H+M ++    
Sbjct: 787 DNVGYMQARLKKHRWHKKVLKTRDPIIVSIGWRRYQTIPVFAIEDRNG-RHRMLKYTPEH 846

Query: 677 RFSIASIYAPISFAPLPLIVLRNVE----GISSFAASGSLKCIDPRRIILKKIILSGYPQ 736
              +AS + P+       +  +N+     G    A S  L+     RI+ KKI L G P 
Sbjct: 847 MHCLASFWGPLVPPNTGFVAFQNLSNNQAGFRITATSVVLEFNHQARIV-KKIKLVGTPC 906

Query: 737 RVSKLKATVRYMFHNPDDVRWFKPVDVWTKCGRRGRVK-------EPVGTHGAMKCIFNG 796
           ++ K  A ++ MF +  ++  F+   V T  G RG+VK       +     G  +C F  
Sbjct: 907 KIKKKTAFIKDMFTSDLEIARFEGSSVRTVSGIRGQVKKAGKNMLDNKAEEGIARCTFED 966

Query: 797 VLQQHDTVCMSLYKRV 801
            +   D V +  +  V
Sbjct: 967 QIHMSDMVFLRAWTTV 980

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g09620 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5XGY17.5e-12336.17Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis OX=8355 GN=tsr1 PE=2 ... [more]
Q5R4345.4e-12137.50Pre-rRNA-processing protein TSR1 homolog OS=Pongo abelii OX=9601 GN=TSR1 PE=2 SV... [more]
Q2NL825.5e-11836.78Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens OX=9606 GN=TSR1 PE=1 SV... [more]
Q5SWD95.7e-11536.08Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 PE=1 S... [more]
Q9VP474.9e-10634.24Pre-rRNA-processing protein TSR1 homolog OS=Drosophila melanogaster OX=7227 GN=T... [more]
BLAST of Cp4.1LG17g09620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023513549.10.0100.00pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023513... [more]
XP_023004943.10.099.35pre-rRNA-processing protein TSR1 homolog [Cucurbita maxima] >XP_023004944.1 pre-... [more]
KAG6592850.10.099.35Pre-rRNA-processing protein TSR1-like protein, partial [Cucurbita argyrosperma s... [more]
XP_022960248.10.099.09pre-rRNA-processing protein TSR1 homolog [Cucurbita moschata][more]
XP_023547507.10.092.99pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023547... [more]
BLAST of Cp4.1LG17g09620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1L0W30.099.35pre-rRNA-processing protein TSR1 homolog OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1H8A70.099.09pre-rRNA-processing protein TSR1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A5A7T9F00.092.07Pre-rRNA-processing protein TSR1-like protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A6J1GPU50.090.92LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog OS=Cucurbita mosch... [more]
A0A6J1DWQ90.089.02pre-rRNA-processing protein TSR1 homolog isoform X1 OS=Momordica charantia OX=36... [more]
BLAST of Cp4.1LG17g09620 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G42440.11.5e-28863.83FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCA... [more]
AT1G06720.12.3e-1026.53P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012948AARP2CNSMARTSM00785aarp2cn2coord: 237..318
e-value: 2.5E-24
score: 96.8
IPR012948AARP2CNPFAMPF08142AARP2CNcoord: 237..317
e-value: 1.1E-19
score: 70.3
IPR007034Ribosome biogenesis protein BMS1/TSR1, C-terminalSMARTSM01362DUF663_2coord: 488..800
e-value: 3.8E-146
score: 501.5
IPR007034Ribosome biogenesis protein BMS1/TSR1, C-terminalPFAMPF04950RIBIOP_Ccoord: 489..802
e-value: 2.5E-105
score: 352.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..428
NoneNo IPR availablePANTHERPTHR12858:SF1PRE-RRNA-PROCESSING PROTEIN TSR1 HOMOLOGcoord: 46..806
IPR039761Ribosome biogenesis protein Bms1/Tsr1PANTHERPTHR12858RIBOSOME BIOGENESIS PROTEINcoord: 46..806
IPR030387Bms1/Tsr1-type G domainPROSITEPS51714G_BMS1coord: 90..251
score: 18.161678

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g09620.1Cp4.1LG17g09620.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005730 nucleolus
cellular_component GO:0030688 preribosome, small subunit precursor
cellular_component GO:0005634 nucleus
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0034511 U3 snoRNA binding