Cp4.1LG17g06600 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g06600
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Elongation factor Tu
Location	Cp4.1LG17: 6514346 .. 6518632 (+)
RNA-Seq Expression	Cp4.1LG17g06600
Synteny	Cp4.1LG17g06600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTCTGTAAACCCCCAAATAGCTTCCGCCAAACCGGAAGCTTTTCTTCTTCCCGCTTCTTTGTACTTTCTTCTTCTCGGACTGCTTCCGGCGAGCGATTTGAGTTCCAATGGCCTCGGCTGCTCTCCGATGCTCTACCTCCAAGCGCCTTCTTGCCTATTCGTCTTCATTATCGTGGTGTTGCAGAGGATCCGCTTCCTCCCAATCTTCCATCTCCGAATTGCTTTCCAGAAACGATGGAACATCCAGTCCCATTCCTTGGTGGAGATCCATGGCCACCTTCACTCGGACGTAAGAAATTTAAGCTCTGAAGATTTTTCTCTCCTTTTTTTTTTTCAGCATGTTTATGCGGTTGCCAGACGGATTTGTATTTTCTTGGTTCTCTGTAATTGGTTAGTTTTTTTTGTTAATTTATTTCGATTTACATTGCGGGTGGACAGAAAGCCTCATGTGAATGTGGGGACAATTGGGCATGTTGACCATGGAAAGACTACATTGACTGCAGCTATTACGAAGGTTGGATTATCATTTATTTTTTTTAACGAAGTGCTAATGTATCTTTGATTCATTGCGAGTAGAAACTTTATTATGTAGAAGTATTAATGTCGGATACTCAATACGTGGAGTTATCATTTGAATTTCAATTTCCTTTAGGTGTTGGCCGAGGAAGGGAAAGCTAAGGCTATAGCATTTGATGAAATTGATAAAGCTCCAGAGGAGAAAAAAAGAGGAATTACCATTGCAACGGTTGGTGTCCAAATTTTATTCTTGTTGGGAACTTACTTTCCATTTACTCTGTCGCCTATGCATATCTCTCCTCAAACCATCATTTGACTTGGGTTTATGATAAATTTCAATTTTGCAGGCTCACGTAGAGTATGAAACTGCTAAGAGACATTATGCACACGTAGATTGCCCTGGACATGCAGACTACGTTAAAGTAAGCCATGGATTGATATTTTTATTATTTAAAACAGAGCACAGTAATTTATTATTCAGTTATACCTTTGATTGGTGGGTTGATATAAATGTCATGGGCAAGGAGTTGTAAGTAGCAAGCATAAGTAGGTAGAATAATGAAGAATGTTGGCGTTCTTCATAACTAGAAGGTGGGTACTCAAGTCAGGTTCACTGCAAGCTGAATGCCATTTATTGGTGGACAACTTGCATATTGTACACTACTTGTATACAAGAGCAGGTTTCTTGACTTTTTTTTTTTACAGCTTTCAACATTTTAGTTTCCCCCAATGGCGCAATGTTTACATCAATTGGTTATAATTTTCTGATTATCGGAGATTTTATGAACAACTATTGAATGATGGTGGTAATTGGTGCAGAACATGATTACTGGAGCTGCTCAAATGGATGGTGGAATCCTTGTTGTGTCTGGTCCTGATGGGGCCATGCCTCAGACTAAGGAGCATATTCTACTAGCACGGCAGGTGTACATTTGTTTGTTTGGATCATATATGTTTTCTGCAGTGCAGATTTTCTTGTTTTTATGTGCTTTTGGGATGTAATGTTAATGCACTATAAATTTGTTTTATTACATCATTCAGGTTGGTGTTCCATCACTTGTGTGCTTCTTGAATAAAGTTGACGCTGTTGATGATCCTGAATTGTTGGACCTTGTGGAAATGGAACTTCGTGGTATGATTACACAGTTGTATTTGGGTGCAGCTACTGTTTCCAGGATTTCAATTGTACATTTTAAATTGTGGTTTATGTTTTTGGCAGAACTTCTCAGCTTCTACAAGTTCCCTGGCGATGACATTCCCATCATTAGGGGTTCAGCTTTATCTGCATTACAGGGTACAAACGAAGAAATTGGTAAAAAGGCTATTCTACAGTTAATGGATGCTGTTGATGAATACATTCCTGACCCTGTTCGCCAGCTTGACAAGCCTTTCCTGATGCCAATTGAAGATGTTTTCTCTATTCAAGTATGGAGGACATGCCCTGGTCTTATATCAAAATAGTTCGTTCTGTTACCTTTTTTGTAATTATTTACCTGTGAACATGTTCATATAAAAAAAAAATACTATAAATTTAGACTGCTCATAATAGATTGTATATCATCAAGTTGGAACTTACATCCAGTTGAGTACTTGACATTTTTTGTGTAGACTGCACCATGTGCACCTATAGTTGCAAGTAAGTCGCAATGTGTAATGCTGATGTAATGAGTATAGGTTCACTTTTCAATTTCAGTACGTTGATGTTTGGCTGATAAAGTATGTATGAAGAGTTATTTTTGAAGTGAACTTGATTCTATCTGTTTATGCTGAAGGGTCGTGGAACTGTTGCTACTGGCCGTGTTGAGCAGGGAACTATTAAAGTTGGTGAAGAAGTTGAAGTTCTAGGGTTAGCTCAGGTAATTAGATATACCACATTCAATTTCTAACTATGTTTTGTGTGTGCGGTATGGGCACACACCTTGTACCACTTTTGAGTCACTGTTGAACCTGCAACTAACTAGGGATGATTACAGTCTTGGGGCTAGGTATTGTGTGTTGTCATTGTGATCCTTGTTCGTGAAATTAAACATTGGTTTGATAATACTCTATTCACGATGTCTTTTGCAGGGGCCTCCTTTGAAAACTACTGTAACTGGTGTTGAGATGTTCAAGAAAATCCTGGATCAAGGACAAGTAATTGGCTGTTAACTTTTACTTACCTCATTAATAATTTTTCTTTTTTTATCATAAAATACATACACAAAAGAACAATGACAGAAGTAAAGTCCTAGAAAAAAGGAGCCAGAAAATTGGAAGCTACCTAAATACAAATAATTAAGTTGGTTTATGATTCTAACTTCGCTAGCATGTATTTGTATGTTTTTATTATACGAGGAAGAAAATTTACTTTAAAAATGGAACACTAATACTGAAAGGACCTCCAATAGAACAAGCCAAATGAGTTGAAAAATTCCTTACACTTGTCTAATGTTGACTTCATGTGTTTGTTAGGCTGGTGATAACGTCGGTCTCCTTCTCCGTGGTCTAAAAAGAGAAGACATTCAACGTGGACAGGTATGTACATTGGCGTTACTCATGTTGAAATGTATTTGCTGTTAGGAATCACGGATCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGCTTTGTTTTGAGCTTCCCCAAAAGGCCTCATACCAATGGAGTAGTATTCCCCACTTATAAACCCGTGATCTTCCACTAAATTAACCAATGTGGGACTCACTCCCAATAATCCTCAACATTTGCATCTCATGGAAATTATCAATATAGATGACATTATGACAATGAGGTAGAAGGATTCATACGCTCAAGGAATTACATTTTGAAGGCGACTGTAGCATACACACTTGGATATGATTGTTTCAGTGTTTTCTTTTTTCTTTTTTCTTTACTTATAGGTTATTGCAAAGCCTGGAACTCTCAAAACCTCCAAGAAATTTGAGGCGGAGATATATGTTCTCACAAAAGAGGAAGGTGGCCGACATACTGCTTTCATGTCCAACTACAGACCTCAATTTTACATGAGAACTGCAGATATCACTGGGAAGGTTGAATTACCTGAAAATGTTAAGATGGTTATGCCTGGTGACAACGTGACAGCAGCTTTTGAGTTGATTTTACCCGTCCCCCTTGAAGCAGGTGCGTCTCATTTAAACTCTCTTGGAATATAAAGACTAAATCTAACGATTACTTCCTTTTCCCTTGCTTTGGTACTGCAAAATTTTGTGTACGTTTAGTGCATAAGTTGGTTCAAATGTTCATAGAGAAGTTTCGGGTTTATTTTTTGAAAACCAATCAGCCTTGAATCTGATCACATCCATGGATTAGGGTGCTTTTTTTCTTGCCAAAAATGTAATGCTGTATTCTTTGCAGGACAAAGATTTGCCCTGAGGGAGGGTGGTAGAACGGTTGGTGCTGGAGTAGTCTCCAAAGTTCTTAGCTGAGCCTGAGGTACTGCGCCCATTTCCTTGAAAGCTCTGCCAAAACCAAACAATTTTTGAAGATCCATCGTTGACAACATGATGCTATTCGACATTGTTTACAGAATCAGTTATTTATATTAGGCCCTTGAGAGATTATTAGGATGTTATGTAATTTGCATAGATTAAGGAAGCTGCATTTTATTGTCTTGAGTCTAATCCTTCAAGATTATCTTGGTCCTCTTCATCTCTTCTTTCCATTTTCAAGTTGATCACTAATAATTTTAGAGTACATAAATGGCAATGGCATAATCAATGTACGTTCAACATTTAGAATTATGAACGTGAATTCAGAT

mRNA sequence

GTCTCTGTAAACCCCCAAATAGCTTCCGCCAAACCGGAAGCTTTTCTTCTTCCCGCTTCTTTGTACTTTCTTCTTCTCGGACTGCTTCCGGCGAGCGATTTGAGTTCCAATGGCCTCGGCTGCTCTCCGATGCTCTACCTCCAAGCGCCTTCTTGCCTATTCGTCTTCATTATCGTGGTGTTGCAGAGGATCCGCTTCCTCCCAATCTTCCATCTCCGAATTGCTTTCCAGAAACGATGGAACATCCAGTCCCATTCCTTGGTGGAGATCCATGGCCACCTTCACTCGGACAAAGCCTCATGTGAATGTGGGGACAATTGGGCATGTTGACCATGGAAAGACTACATTGACTGCAGCTATTACGAAGGTGTTGGCCGAGGAAGGGAAAGCTAAGGCTATAGCATTTGATGAAATTGATAAAGCTCCAGAGGAGAAAAAAAGAGGAATTACCATTGCAACGGCTCACGTAGAGTATGAAACTGCTAAGAGACATTATGCACACGTAGATTGCCCTGGACATGCAGACTACGTTAAAAACATGATTACTGGAGCTGCTCAAATGGATGGTGGAATCCTTGTTGTGTCTGGTCCTGATGGGGCCATGCCTCAGACTAAGGAGCATATTCTACTAGCACGGCAGGTTGGTGTTCCATCACTTGTGTGCTTCTTGAATAAAGTTGACGCTGTTGATGATCCTGAATTGTTGGACCTTGTGGAAATGGAACTTCGTGAACTTCTCAGCTTCTACAAGTTCCCTGGCGATGACATTCCCATCATTAGGGGTTCAGCTTTATCTGCATTACAGGGTACAAACGAAGAAATTGGTAAAAAGGCTATTCTACAGTTAATGGATGCTGTTGATGAATACATTCCTGACCCTGTTCGCCAGCTTGACAAGCCTTTCCTGATGCCAATTGAAGATGTTTTCTCTATTCAAGGTCGTGGAACTGTTGCTACTGGCCGTGTTGAGCAGGGAACTATTAAAGTTGGTGAAGAAGTTGAAGTTCTAGGGTTAGCTCAGGGGCCTCCTTTGAAAACTACTGTAACTGGTGTTGAGATGTTCAAGAAAATCCTGGATCAAGGACAAGTTATTGCAAAGCCTGGAACTCTCAAAACCTCCAAGAAATTTGAGGCGGAGATATATGTTCTCACAAAAGAGGAAGGTGGCCGACATACTGCTTTCATGTCCAACTACAGACCTCAATTTTACATGAGAACTGCAGATATCACTGGGAAGGTTGAATTACCTGAAAATGTTAAGATGGTTATGCCTGGTGACAACGTGACAGCAGCTTTTGAGTTGATTTTACCCGTCCCCCTTGAAGCAGGACAAAGATTTGCCCTGAGGGAGGGTGGTAGAACGGTTGGTGCTGGAGTAGTCTCCAAAGTTCTTAGCTGAGCCTGAGGTACTGCGCCCATTTCCTTGAAAGCTCTGCCAAAACCAAACAATTTTTGAAGATCCATCGTTGACAACATGATGCTATTCGACATTGTTTACAGAATCAGTTATTTATATTAGGCCCTTGAGAGATTATTAGGATGTTATGTAATTTGCATAGATTAAGGAAGCTGCATTTTATTGTCTTGAGTCTAATCCTTCAAGATTATCTTGGTCCTCTTCATCTCTTCTTTCCATTTTCAAGTTGATCACTAATAATTTTAGAGTACATAAATGGCAATGGCATAATCAATGTACGTTCAACATTTAGAATTATGAACGTGAATTCAGAT

Coding sequence (CDS)

ATGGCCTCGGCTGCTCTCCGATGCTCTACCTCCAAGCGCCTTCTTGCCTATTCGTCTTCATTATCGTGGTGTTGCAGAGGATCCGCTTCCTCCCAATCTTCCATCTCCGAATTGCTTTCCAGAAACGATGGAACATCCAGTCCCATTCCTTGGTGGAGATCCATGGCCACCTTCACTCGGACAAAGCCTCATGTGAATGTGGGGACAATTGGGCATGTTGACCATGGAAAGACTACATTGACTGCAGCTATTACGAAGGTGTTGGCCGAGGAAGGGAAAGCTAAGGCTATAGCATTTGATGAAATTGATAAAGCTCCAGAGGAGAAAAAAAGAGGAATTACCATTGCAACGGCTCACGTAGAGTATGAAACTGCTAAGAGACATTATGCACACGTAGATTGCCCTGGACATGCAGACTACGTTAAAAACATGATTACTGGAGCTGCTCAAATGGATGGTGGAATCCTTGTTGTGTCTGGTCCTGATGGGGCCATGCCTCAGACTAAGGAGCATATTCTACTAGCACGGCAGGTTGGTGTTCCATCACTTGTGTGCTTCTTGAATAAAGTTGACGCTGTTGATGATCCTGAATTGTTGGACCTTGTGGAAATGGAACTTCGTGAACTTCTCAGCTTCTACAAGTTCCCTGGCGATGACATTCCCATCATTAGGGGTTCAGCTTTATCTGCATTACAGGGTACAAACGAAGAAATTGGTAAAAAGGCTATTCTACAGTTAATGGATGCTGTTGATGAATACATTCCTGACCCTGTTCGCCAGCTTGACAAGCCTTTCCTGATGCCAATTGAAGATGTTTTCTCTATTCAAGGTCGTGGAACTGTTGCTACTGGCCGTGTTGAGCAGGGAACTATTAAAGTTGGTGAAGAAGTTGAAGTTCTAGGGTTAGCTCAGGGGCCTCCTTTGAAAACTACTGTAACTGGTGTTGAGATGTTCAAGAAAATCCTGGATCAAGGACAAGTTATTGCAAAGCCTGGAACTCTCAAAACCTCCAAGAAATTTGAGGCGGAGATATATGTTCTCACAAAAGAGGAAGGTGGCCGACATACTGCTTTCATGTCCAACTACAGACCTCAATTTTACATGAGAACTGCAGATATCACTGGGAAGGTTGAATTACCTGAAAATGTTAAGATGGTTATGCCTGGTGACAACGTGACAGCAGCTTTTGAGTTGATTTTACCCGTCCCCCTTGAAGCAGGACAAAGATTTGCCCTGAGGGAGGGTGGTAGAACGGTTGGTGCTGGAGTAGTCTCCAAAGTTCTTAGCTGA

Protein sequence

MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGKKAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVLGLAQGPPLKTTVTGVEMFKKILDQGQVIAKPGTLKTSKKFEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELILPVPLEAGQRFALREGGRTVGAGVVSKVLS

Homology

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BLAST of Cp4.1LG17g06600 vs. ExPASy Swiss-Prot
Match: Q9ZT91 (Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=TUFA PE=1 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 7.3e-202
Identity = 370/454 (81.50%), Postives = 394/454 (86.78%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPI---PWWRSMAT 60
           MAS  LR  +SKRL+ +SS +   C  S +S  SIS  +  +D +SS      +WRSMAT
Sbjct: 1   MASVVLRNPSSKRLVPFSSQIYSRCGASVTSSYSISHSIGGDDLSSSTFGTSSFWRSMAT 60

Query: 61  FTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT 120
           FTR KPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT
Sbjct: 61  FTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT 120

Query: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQ 180
           AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDG MPQTKEHILLARQ
Sbjct: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQ 180

Query: 181 VGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEE 240
           VGVPSLVCFLNKVD VDDPELL+LVEMELRELLSFYKFPGDDIPIIRGSALSALQGTN+E
Sbjct: 181 VGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNDE 240

Query: 241 IGKKAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEV 300
           IG++AIL+LMDAVDEYIPDPVR LDKPFLMPIEDVFSIQGRGTVATGR+EQG IKVGEEV
Sbjct: 241 IGRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEV 300

Query: 301 EVLGLAQ-GPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLK 360
           E+LGL + G PLK+TVTGVEMFKKILD GQ                     VIAKPG+ K
Sbjct: 301 EILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVIAKPGSCK 360

Query: 361 TSKKFEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAA 420
           T KKFEAEIYVLTK+EGGRHTAF SNYRPQFY+RTADITGKVELPENVKMVMPGDNVTA 
Sbjct: 361 TYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAV 420

Query: 421 FELILPVPLEAGQRFALREGGRTVGAGVVSKVLS 430
           FELI+PVPLE GQRFALREGGRTVGAGVVSKV++
Sbjct: 421 FELIMPVPLETGQRFALREGGRTVGAGVVSKVMT 454

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BLAST of Cp4.1LG17g06600 vs. ExPASy Swiss-Prot
Match: Q0BUQ2 (Elongation factor Tu OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=tuf PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 3.9e-155
Identity = 276/393 (70.23%), Postives = 315/393 (80.15%), Query Frame = 0


Query: 56  ATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITI 115
           A F R KPH N+GTIGHVDHGKT+LTAAITKVLAE G A   A+D+IDKAPEE+ RGITI
Sbjct: 4   AKFERNKPHCNIGTIGHVDHGKTSLTAAITKVLAETGGATFTAYDQIDKAPEERARGITI 63

Query: 116 ATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLA 175
           +TAHVEYET  RHYAHVDCPGHADYVKNMITGAAQMDGGILVVS  DG MPQT+EHILLA
Sbjct: 64  STAHVEYETGNRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLA 123

Query: 176 RQVGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTN 235
           RQVGVP+LV FLNKVD VDDPELLDLVEME+RELLS Y+FPGDDIPII+GSAL AL+  N
Sbjct: 124 RQVGVPALVVFLNKVDMVDDPELLDLVEMEVRELLSSYQFPGDDIPIIKGSALCALEDKN 183

Query: 236 EEIGKKAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGE 295
            EIG+ AIL+LM+AVD YIP P R LD+PFLMPIEDVFSI GRGTV TGR+E+G +KVG+
Sbjct: 184 PEIGRDAILKLMEAVDAYIPQPERPLDRPFLMPIEDVFSISGRGTVVTGRIERGEVKVGD 243

Query: 296 EVEVLGLAQGPPLKTTVTGVEMFKKILD---------------------QGQVIAKPGTL 355
           EVE++GL      KTTVTGVEMF+K+LD                     +GQV+AKPG++
Sbjct: 244 EVEIVGLK--ATSKTTVTGVEMFRKLLDRGEAGDNIGALLRGTKREDVERGQVLAKPGSI 303

Query: 356 KTSKKFEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTA 415
               KF AE Y+LTKEEGGRHT F +NYRPQFY RT D+TG V LPE  +MVMPGDNV+ 
Sbjct: 304 TPHTKFAAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVSLPEGTEMVMPGDNVSM 363

Query: 416 AFELILPVPLEAGQRFALREGGRTVGAGVVSKV 428
             ELI P+ ++ G RFA+REGGRTVGAGVV+K+
Sbjct: 364 QVELIAPIAMDEGLRFAIREGGRTVGAGVVAKI 394

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BLAST of Cp4.1LG17g06600 vs. ExPASy Swiss-Prot
Match: A5V604 (Elongation factor Tu OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) OX=392499 GN=tuf PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 4.3e-154
Identity = 271/393 (68.96%), Postives = 315/393 (80.15%), Query Frame = 0


Query: 56  ATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITI 115
           A F RTKPH N+GTIGHVDHGKT+LTAAITKVLAE G A  + +  IDKAPEE++RGITI
Sbjct: 4   AKFERTKPHCNIGTIGHVDHGKTSLTAAITKVLAETGGATFVDYANIDKAPEERERGITI 63

Query: 116 ATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLA 175
           +TAHVEYET +RHYAHVDCPGHADYVKNMITGAAQMDGGILVVS  DG MPQT+EHILLA
Sbjct: 64  STAHVEYETEQRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMPQTREHILLA 123

Query: 176 RQVGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTN 235
           RQVGVP+LV F+NKVD VDD E+L+LVE+E+RELLS Y+FPGDDIP+I+GSA+ AL GTN
Sbjct: 124 RQVGVPALVVFMNKVDLVDDAEILELVELEVRELLSSYEFPGDDIPVIKGSAVKALDGTN 183

Query: 236 EEIGKKAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGE 295
           +EIG+ A+L+LM AVD YIP P R LDKPFLMPIEDVFSI GRGTV TGRVE G +KVGE
Sbjct: 184 DEIGRNAVLELMAAVDSYIPQPERPLDKPFLMPIEDVFSISGRGTVVTGRVETGMVKVGE 243

Query: 296 EVEVLGLAQGPPLKTTVTGVEMFKKILDQ---------------------GQVIAKPGTL 355
           EVE++G+      KTTVTGVEMF+K+LDQ                     GQV+AKPG++
Sbjct: 244 EVEIVGIKD--TRKTTVTGVEMFRKLLDQGQAGDNIGALIRGVGREEVERGQVLAKPGSI 303

Query: 356 KTSKKFEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTA 415
           K    F +E+YVL+KEEGGRHT F +NYRPQFY RT D+TG VELPE  +MVMPGDNV  
Sbjct: 304 KPHTDFSSEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGTVELPEGTEMVMPGDNVKL 363

Query: 416 AFELILPVPLEAGQRFALREGGRTVGAGVVSKV 428
             +LI P+ +E G RF++REGGRTVGAGVVS +
Sbjct: 364 GVKLIAPIAMEEGLRFSIREGGRTVGAGVVSSI 394

[Close]

BLAST of Cp4.1LG17g06600 vs. ExPASy Swiss-Prot
Match: Q748X8 (Elongation factor Tu OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=tuf1 PE=3 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 2.1e-153
Identity = 269/394 (68.27%), Postives = 314/394 (79.70%), Query Frame = 0


Query: 56  ATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITI 115
           A F RTKPHVN+GTIGHVDHGKTTLTAAITKVLAE G+A+   FD+ID APEE++RGITI
Sbjct: 4   AKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLAERGQAEFRGFDQIDNAPEERERGITI 63

Query: 116 ATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLA 175
           AT+HVEYET KRHYAHVDCPGHADYVKNMITGAAQMDG ILVVS  DG MPQT+EHILLA
Sbjct: 64  ATSHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLA 123

Query: 176 RQVGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTN 235
           RQVGVP +V FLNK D VDD ELL+LVE+E+RELLS Y FPGDDIPII+GSAL  L G  
Sbjct: 124 RQVGVPYIVVFLNKADMVDDEELLELVELEIRELLSSYDFPGDDIPIIKGSALKGLNGDK 183

Query: 236 EEIGKKAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGE 295
           +E+G++AIL+LM+AVD YIP+P R +DKPFLMP+EDVFSI GRGTVATGRVE+G +KVGE
Sbjct: 184 DELGEEAILKLMEAVDNYIPEPERAVDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGE 243

Query: 296 EVEVLGLAQGPPLKTTVTGVEMFKKILDQ---------------------GQVIAKPGTL 355
           EVE++G+      KTTVTGVEMF+K+LD+                     GQV+AKPG++
Sbjct: 244 EVEIVGIK--ATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGSI 303

Query: 356 KTSKKFEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTA 415
               KF+AE Y+LTKEEGGRHT F + YRPQFY RT D+TG V+LP   +MVMPGDNV  
Sbjct: 304 TPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTGVVDLPAGTEMVMPGDNVAV 363

Query: 416 AFELILPVPLEAGQRFALREGGRTVGAGVVSKVL 429
              LI P+ ++ G RFA+REGGRTVGAGVVS ++
Sbjct: 364 TINLITPIAMDEGLRFAIREGGRTVGAGVVSSII 395

[Close]

BLAST of Cp4.1LG17g06600 vs. ExPASy Swiss-Prot
Match: A5GAW4 (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) OX=351605 GN=tuf1 PE=3 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 2.1e-153
Identity = 271/394 (68.78%), Postives = 316/394 (80.20%), Query Frame = 0


Query: 56  ATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITI 115
           A F RTKPHVN+GTIGHVDHGKTTLTAAITKVLA +G+A+  AFD+ID APEE++RGITI
Sbjct: 4   AKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLAGKGQAEFKAFDQIDNAPEERERGITI 63

Query: 116 ATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLA 175
           ATAHVEYET KRHYAHVDCPGHADYVKNMITGAAQMDG ILVVS  DG MPQT+EHILLA
Sbjct: 64  ATAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLA 123

Query: 176 RQVGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTN 235
           RQVGVP +V FLNK D VDD ELL+LVE+E+RELLS Y FPGDDIPII+GSAL AL+G  
Sbjct: 124 RQVGVPYIVVFLNKADMVDDEELLELVELEIRELLSSYDFPGDDIPIIKGSALKALEGDT 183

Query: 236 EEIGKKAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGE 295
            E+G++AI++LM+AVD YIP+PVR +DKPFLMP+EDVFSI GRGTVATGRVE+G +KVGE
Sbjct: 184 GELGEQAIMKLMEAVDSYIPEPVRAIDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGE 243

Query: 296 EVEVLGLAQGPPLKTTVTGVEMFKKILDQ---------------------GQVIAKPGTL 355
           EVE++G+      KTTVTGVEMF+K+LD+                     GQV+AKPG++
Sbjct: 244 EVEIVGMK--ATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGSI 303

Query: 356 KTSKKFEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTA 415
               KF+AE Y+LTKEEGGRHT F + YRPQFY RT D+TG VEL    +MVMPGDNV  
Sbjct: 304 TPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTGIVELAAGTEMVMPGDNVAV 363

Query: 416 AFELILPVPLEAGQRFALREGGRTVGAGVVSKVL 429
              LI P+ ++ G RFA+REGGRTVGAGVVS ++
Sbjct: 364 TVNLITPIAMDEGLRFAIREGGRTVGAGVVSSII 395

[Close]

BLAST of Cp4.1LG17g06600 vs. NCBI nr
Match: XP_022960442.1 (elongation factor Tu, mitochondrial-like [Cucurbita moschata] >XP_023515142.1 elongation factor Tu, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6593136.1 Elongation factor Tu, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 824 bits (2128), Expect = 3.09e-300
Identity = 429/450 (95.33%), Postives = 429/450 (95.33%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60
           MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR
Sbjct: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60

Query: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
           TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV
Sbjct: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120

Query: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180
           EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV
Sbjct: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180

Query: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240
           PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK
Sbjct: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240

Query: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300
           KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL
Sbjct: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300

Query: 301 GLAQGPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLKTSKK 360
           GLAQGPPLKTTVTGVEMFKKILDQGQ                     VIAKPGTLKTSKK
Sbjct: 301 GLAQGPPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGTLKTSKK 360

Query: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420
           FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI
Sbjct: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420

Query: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 429
           LPVPLEAGQRFALREGGRTVGAGVVSKVLS
Sbjct: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 450

[Close]

BLAST of Cp4.1LG17g06600 vs. NCBI nr
Match: KAG7025536.1 (Elongation factor Tu, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 823 bits (2125), Expect = 8.85e-300
Identity = 428/450 (95.11%), Postives = 429/450 (95.33%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60
           MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELL+RNDGTSSPIPWWRSMATFTR
Sbjct: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLARNDGTSSPIPWWRSMATFTR 60

Query: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
           TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV
Sbjct: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120

Query: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180
           EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV
Sbjct: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180

Query: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240
           PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK
Sbjct: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240

Query: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300
           KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL
Sbjct: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300

Query: 301 GLAQGPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLKTSKK 360
           GLAQGPPLKTTVTGVEMFKKILDQGQ                     VIAKPGTLKTSKK
Sbjct: 301 GLAQGPPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGTLKTSKK 360

Query: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420
           FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI
Sbjct: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420

Query: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 429
           LPVPLEAGQRFALREGGRTVGAGVVSKVLS
Sbjct: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 450

[Close]

BLAST of Cp4.1LG17g06600 vs. NCBI nr
Match: XP_023004535.1 (elongation factor Tu, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 813 bits (2100), Expect = 5.71e-296
Identity = 423/450 (94.00%), Postives = 426/450 (94.67%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60
           MASAALRC TSKRLLAYSSS SWCCRGSAS+QSSISELLSRNDGTSSPIPWWRSMATFTR
Sbjct: 1   MASAALRCYTSKRLLAYSSSSSWCCRGSASAQSSISELLSRNDGTSSPIPWWRSMATFTR 60

Query: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
           TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV
Sbjct: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120

Query: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180
           EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV
Sbjct: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180

Query: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240
           PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK
Sbjct: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240

Query: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300
           KAIL+LMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL
Sbjct: 241 KAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300

Query: 301 GLAQGPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLKTSKK 360
           GLAQGPPLKTTVTGVEMFKKILDQGQ                     VIAKPGT+KTSKK
Sbjct: 301 GLAQGPPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGTIKTSKK 360

Query: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420
           FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELP NVKMVMPGDNVTAAFELI
Sbjct: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPVNVKMVMPGDNVTAAFELI 420

Query: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 429
           LPVPLEAGQRFALREGGRTVGAGVVSKVLS
Sbjct: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 450

[Close]

BLAST of Cp4.1LG17g06600 vs. NCBI nr
Match: XP_022992519.1 (elongation factor Tu, mitochondrial [Cucurbita maxima])

HSP 1 Score: 796 bits (2055), Expect = 4.10e-289
Identity = 412/450 (91.56%), Postives = 421/450 (93.56%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60
           MAS A R STSKRLLA+SS LSWCCRGSASS SSIS+LLSRNDG SSPIPWWRSMATFTR
Sbjct: 1   MASVAFRNSTSKRLLAHSSPLSWCCRGSASSHSSISDLLSRNDGASSPIPWWRSMATFTR 60

Query: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
           TKPHVNVGTIGHVDHGKTTLTAAITKVLA+EGKAKA+AFDEIDKAPEEKKRGITIATAHV
Sbjct: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLADEGKAKAVAFDEIDKAPEEKKRGITIATAHV 120

Query: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180
           EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV
Sbjct: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180

Query: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240
           PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK
Sbjct: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240

Query: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300
           KAIL+LM+AVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL
Sbjct: 241 KAILKLMEAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300

Query: 301 GLAQGPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLKTSKK 360
           GL QGPP+KTTVTGVEMFKKILDQGQ                     VIAKPG+LKT KK
Sbjct: 301 GLTQGPPMKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSLKTYKK 360

Query: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420
           FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI
Sbjct: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420

Query: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 429
           LPVPLEAGQRFALREGGRTVGAGVVSKV+S
Sbjct: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVIS 450

[Close]

BLAST of Cp4.1LG17g06600 vs. NCBI nr
Match: XP_022953519.1 (elongation factor Tu, mitochondrial [Cucurbita moschata] >KAG6575887.1 Elongation factor Tu, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 794 bits (2051), Expect = 1.67e-288
Identity = 412/450 (91.56%), Postives = 421/450 (93.56%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60
           MAS ALR STSKRLLA+SS LSWCCRGSASS SSIS+LLSRNDG SSPIPWWRSMATFTR
Sbjct: 1   MASVALRNSTSKRLLAHSSPLSWCCRGSASSHSSISDLLSRNDGASSPIPWWRSMATFTR 60

Query: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
           TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKA+AFDEIDKAPEE+KRGITIATAHV
Sbjct: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEERKRGITIATAHV 120

Query: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180
           EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV
Sbjct: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180

Query: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240
           PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK
Sbjct: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240

Query: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300
           KAIL+LM+AVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL
Sbjct: 241 KAILKLMEAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300

Query: 301 GLAQGPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLKTSKK 360
           GL QG P+KTTVTGVEMFKKILDQGQ                     VIAKPG+LKT KK
Sbjct: 301 GLTQGAPMKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSLKTYKK 360

Query: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420
           FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI
Sbjct: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420

Query: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 429
           LPVPLEAGQRFALREGGRTVGAGVVSKV+S
Sbjct: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVIS 450

[Close]

BLAST of Cp4.1LG17g06600 vs. ExPASy TrEMBL
Match: A0A6J1H7F2 (Elongation factor Tu OS=Cucurbita moschata OX=3662 GN=LOC111461175 PE=3 SV=1)

HSP 1 Score: 824 bits (2128), Expect = 1.50e-300
Identity = 429/450 (95.33%), Postives = 429/450 (95.33%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60
           MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR
Sbjct: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60

Query: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
           TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV
Sbjct: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120

Query: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180
           EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV
Sbjct: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180

Query: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240
           PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK
Sbjct: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240

Query: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300
           KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL
Sbjct: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300

Query: 301 GLAQGPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLKTSKK 360
           GLAQGPPLKTTVTGVEMFKKILDQGQ                     VIAKPGTLKTSKK
Sbjct: 301 GLAQGPPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGTLKTSKK 360

Query: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420
           FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI
Sbjct: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420

Query: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 429
           LPVPLEAGQRFALREGGRTVGAGVVSKVLS
Sbjct: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 450

[Close]

BLAST of Cp4.1LG17g06600 vs. ExPASy TrEMBL
Match: A0A6J1KUV3 (Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111497810 PE=3 SV=1)

HSP 1 Score: 813 bits (2100), Expect = 2.76e-296
Identity = 423/450 (94.00%), Postives = 426/450 (94.67%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60
           MASAALRC TSKRLLAYSSS SWCCRGSAS+QSSISELLSRNDGTSSPIPWWRSMATFTR
Sbjct: 1   MASAALRCYTSKRLLAYSSSSSWCCRGSASAQSSISELLSRNDGTSSPIPWWRSMATFTR 60

Query: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
           TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV
Sbjct: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120

Query: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180
           EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV
Sbjct: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180

Query: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240
           PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK
Sbjct: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240

Query: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300
           KAIL+LMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL
Sbjct: 241 KAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300

Query: 301 GLAQGPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLKTSKK 360
           GLAQGPPLKTTVTGVEMFKKILDQGQ                     VIAKPGT+KTSKK
Sbjct: 301 GLAQGPPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGTIKTSKK 360

Query: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420
           FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELP NVKMVMPGDNVTAAFELI
Sbjct: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPVNVKMVMPGDNVTAAFELI 420

Query: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 429
           LPVPLEAGQRFALREGGRTVGAGVVSKVLS
Sbjct: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 450

[Close]

BLAST of Cp4.1LG17g06600 vs. ExPASy TrEMBL
Match: A0A6J1JXR8 (Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111488822 PE=3 SV=1)

HSP 1 Score: 796 bits (2055), Expect = 1.99e-289
Identity = 412/450 (91.56%), Postives = 421/450 (93.56%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60
           MAS A R STSKRLLA+SS LSWCCRGSASS SSIS+LLSRNDG SSPIPWWRSMATFTR
Sbjct: 1   MASVAFRNSTSKRLLAHSSPLSWCCRGSASSHSSISDLLSRNDGASSPIPWWRSMATFTR 60

Query: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
           TKPHVNVGTIGHVDHGKTTLTAAITKVLA+EGKAKA+AFDEIDKAPEEKKRGITIATAHV
Sbjct: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLADEGKAKAVAFDEIDKAPEEKKRGITIATAHV 120

Query: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180
           EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV
Sbjct: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180

Query: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240
           PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK
Sbjct: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240

Query: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300
           KAIL+LM+AVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL
Sbjct: 241 KAILKLMEAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300

Query: 301 GLAQGPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLKTSKK 360
           GL QGPP+KTTVTGVEMFKKILDQGQ                     VIAKPG+LKT KK
Sbjct: 301 GLTQGPPMKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSLKTYKK 360

Query: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420
           FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI
Sbjct: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420

Query: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 429
           LPVPLEAGQRFALREGGRTVGAGVVSKV+S
Sbjct: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVIS 450

[Close]

BLAST of Cp4.1LG17g06600 vs. ExPASy TrEMBL
Match: A0A6J1GPX9 (Elongation factor Tu OS=Cucurbita moschata OX=3662 GN=LOC111456042 PE=3 SV=1)

HSP 1 Score: 794 bits (2051), Expect = 8.08e-289
Identity = 412/450 (91.56%), Postives = 421/450 (93.56%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60
           MAS ALR STSKRLLA+SS LSWCCRGSASS SSIS+LLSRNDG SSPIPWWRSMATFTR
Sbjct: 1   MASVALRNSTSKRLLAHSSPLSWCCRGSASSHSSISDLLSRNDGASSPIPWWRSMATFTR 60

Query: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
           TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKA+AFDEIDKAPEE+KRGITIATAHV
Sbjct: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEERKRGITIATAHV 120

Query: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180
           EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV
Sbjct: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180

Query: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240
           PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK
Sbjct: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240

Query: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300
           KAIL+LM+AVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL
Sbjct: 241 KAILKLMEAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300

Query: 301 GLAQGPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLKTSKK 360
           GL QG P+KTTVTGVEMFKKILDQGQ                     VIAKPG+LKT KK
Sbjct: 301 GLTQGAPMKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSLKTYKK 360

Query: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420
           FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI
Sbjct: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420

Query: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 429
           LPVPLEAGQRFALREGGRTVGAGVVSKV+S
Sbjct: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVIS 450

[Close]

BLAST of Cp4.1LG17g06600 vs. ExPASy TrEMBL
Match: A0A6J1D7X3 (Elongation factor Tu OS=Momordica charantia OX=3673 GN=LOC111018447 PE=3 SV=1)

HSP 1 Score: 793 bits (2048), Expect = 2.31e-288
Identity = 412/450 (91.56%), Postives = 420/450 (93.33%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPIPWWRSMATFTR 60
           MAS ALR +TSKRL A SS LSWCCRGSASS SSISEL+SR+D TSSP+PWWRSMATFTR
Sbjct: 1   MASVALRHTTSKRLHALSSPLSWCCRGSASSHSSISELISRDDATSSPVPWWRSMATFTR 60

Query: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120
           TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKA+AFDEIDKAPEEKKRGITIATAHV
Sbjct: 61  TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKKRGITIATAHV 120

Query: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180
           EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV
Sbjct: 121 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQVGV 180

Query: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGK 240
           PSLVCFLNKVDAVDDPELLDLVEMELRELL+FYKFPGDDIPIIRGSALSALQGTNEEIGK
Sbjct: 181 PSLVCFLNKVDAVDDPELLDLVEMELRELLNFYKFPGDDIPIIRGSALSALQGTNEEIGK 240

Query: 241 KAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300
           KAIL+LMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL
Sbjct: 241 KAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVL 300

Query: 301 GLAQGPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLKTSKK 360
           GLAQGPPLKTTVTGVEMFKKILDQGQ                     VIAKPG+LKTSKK
Sbjct: 301 GLAQGPPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSLKTSKK 360

Query: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAAFELI 420
           FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTA FELI
Sbjct: 361 FEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTATFELI 420

Query: 421 LPVPLEAGQRFALREGGRTVGAGVVSKVLS 429
            PVPLEAGQRFALREGGRTVGAGVVSKVLS
Sbjct: 421 SPVPLEAGQRFALREGGRTVGAGVVSKVLS 450

[Close]

BLAST of Cp4.1LG17g06600 vs. TAIR 10
Match: AT4G02930.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 704.5 bits (1817), Expect = 5.2e-203
Identity = 370/454 (81.50%), Postives = 394/454 (86.78%), Query Frame = 0


Query: 1   MASAALRCSTSKRLLAYSSSLSWCCRGSASSQSSISELLSRNDGTSSPI---PWWRSMAT 60
           MAS  LR  +SKRL+ +SS +   C  S +S  SIS  +  +D +SS      +WRSMAT
Sbjct: 1   MASVVLRNPSSKRLVPFSSQIYSRCGASVTSSYSISHSIGGDDLSSSTFGTSSFWRSMAT 60

Query: 61  FTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT 120
           FTR KPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT
Sbjct: 61  FTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT 120

Query: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQTKEHILLARQ 180
           AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDG MPQTKEHILLARQ
Sbjct: 121 AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQ 180

Query: 181 VGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNEE 240
           VGVPSLVCFLNKVD VDDPELL+LVEMELRELLSFYKFPGDDIPIIRGSALSALQGTN+E
Sbjct: 181 VGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNDE 240

Query: 241 IGKKAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEV 300
           IG++AIL+LMDAVDEYIPDPVR LDKPFLMPIEDVFSIQGRGTVATGR+EQG IKVGEEV
Sbjct: 241 IGRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEV 300

Query: 301 EVLGLAQ-GPPLKTTVTGVEMFKKILDQGQ---------------------VIAKPGTLK 360
           E+LGL + G PLK+TVTGVEMFKKILD GQ                     VIAKPG+ K
Sbjct: 301 EILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVIAKPGSCK 360

Query: 361 TSKKFEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAA 420
           T KKFEAEIYVLTK+EGGRHTAF SNYRPQFY+RTADITGKVELPENVKMVMPGDNVTA 
Sbjct: 361 TYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAV 420

Query: 421 FELILPVPLEAGQRFALREGGRTVGAGVVSKVLS 430
           FELI+PVPLE GQRFALREGGRTVGAGVVSKV++
Sbjct: 421 FELIMPVPLETGQRFALREGGRTVGAGVVSKVMT 454

[Close]

BLAST of Cp4.1LG17g06600 vs. TAIR 10
Match: AT4G20360.1 (RAB GTPase homolog E1B )

HSP 1 Score: 478.0 bits (1229), Expect = 7.9e-135
Identity = 277/476 (58.19%), Postives = 324/476 (68.07%), Query Frame = 0


Query: 3   SAALRCSTSKRLL-AYSSSLSWCCRGSASSQS------SISELLSRNDGTSSPIPWWRSM 62
           SA   CS+S R+L +YSS     C   ++S        S S L S +  T+S     R  
Sbjct: 4   SAPAACSSSSRILCSYSSPSPSLCPAISTSGKLKTLTLSSSFLPSYSLTTTSASQSTRRS 63

Query: 63  AT-------FTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEE 122
            T       F R KPHVN+GTIGHVDHGKTTLTAA+T  LA  G + A  +DEID APEE
Sbjct: 64  FTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEE 123

Query: 123 KKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGAMPQT 182
           + RGITI TA VEYET  RHYAHVDCPGHADYVKNMITGAAQMDG ILVVSG DG MPQT
Sbjct: 124 RARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 183

Query: 183 KEHILLARQVGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPGDDIPIIRGSAL 242
           KEHILLA+QVGVP +V FLNK D VDD ELL+LVE+E+RELLS Y+F GDDIPII GSAL
Sbjct: 184 KEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSYEFNGDDIPIISGSAL 243

Query: 243 SALQ----------GTNEEIGKKAILQLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGR 302
            A++          G N+ + K  I +LMDAVD+YIP P RQ + PFL+ +EDVFSI GR
Sbjct: 244 LAVETLTENPKVKRGDNKWVDK--IYELMDAVDDYIPIPQRQTELPFLLAVEDVFSITGR 303

Query: 303 GTVATGRVEQGTIKVGEEVEVLGLAQGPPLKTTVTGVEMFKKILDQ-------------- 362
           GTVATGRVE+GT+KVGE V+++GL +      TVTGVEMF+KILD+              
Sbjct: 304 GTVATGRVERGTVKVGETVDLVGLRE--TRSYTVTGVEMFQKILDEALAGDNVGLLLRGI 363

Query: 363 -------GQVIAKPGTLKTSKKFEAEIYVLTKEEGGRHTAFMSNYRPQFYMRTADITGKV 422
                  G V+AKPG++    KFEA IYVL KEEGGRH+ F + YRPQFYMRT D+TGKV
Sbjct: 364 QKADIQRGMVLAKPGSITPHTKFEAIIYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV 423

Query: 423 -----ELPENVKMVMPGDNVTAAFELILPVPLEAGQRFALREGGRTVGAGVVSKVL 429
                +  E  KMVMPGD V    ELI+PV  E G RFA+REGG+TVGAGV+  +L
Sbjct: 424 TKIMNDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIGTIL 475

[Close]

BLAST of Cp4.1LG17g06600 vs. TAIR 10
Match: AT1G07920.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 139.0 bits (349), Expect = 8.7e-33
Identity = 102/294 (34.69%), Postives = 148/294 (50.34%), Query Frame = 0


Query: 60  RTKPHVNVGTIGHVDHGKTTLT-------AAITKVLAEEGKAKAIAFDE--------IDK 119
           + K H+N+  IGHVD GK+T T         I K + E  + +A   ++        +DK
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 120 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGA 179
              E++RGITI  A  ++ET K +   +D PGH D++KNMITG +Q D  +L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 180 MP-------QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPG 239
                    QT+EH LLA  +GV  ++C  NK+DA          +  ++E+ S+ K  G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 240 ---DDIPIIRGSALSALQGTNEEIGKKAILQ------LMDAVDEYIPDPVRQLDKPFLMP 299
              D IP +    +S  +G N  I +   L       L++A+D+ I +P R  DKP  +P
Sbjct: 183 YNPDKIPFV---PISGFEGDN-MIERSTNLDWYKGPTLLEALDQ-INEPKRPSDKPLRLP 242

Query: 300 IEDVFSIQGRGTVATGRVEQGTIKVGEEVEVLGLAQGPPLKTTVTGVEMFKKIL 323
           ++DV+ I G GTV  GRVE G IK G  V          L T V  VEM  + L
Sbjct: 243 LQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTG----LTTEVKSVEMHHESL 287

[Close]

BLAST of Cp4.1LG17g06600 vs. TAIR 10
Match: AT1G07930.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 139.0 bits (349), Expect = 8.7e-33
Identity = 102/294 (34.69%), Postives = 148/294 (50.34%), Query Frame = 0


Query: 60  RTKPHVNVGTIGHVDHGKTTLT-------AAITKVLAEEGKAKAIAFDE--------IDK 119
           + K H+N+  IGHVD GK+T T         I K + E  + +A   ++        +DK
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 120 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGA 179
              E++RGITI  A  ++ET K +   +D PGH D++KNMITG +Q D  +L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 180 MP-------QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPG 239
                    QT+EH LLA  +GV  ++C  NK+DA          +  ++E+ S+ K  G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 240 ---DDIPIIRGSALSALQGTNEEIGKKAILQ------LMDAVDEYIPDPVRQLDKPFLMP 299
              D IP +    +S  +G N  I +   L       L++A+D+ I +P R  DKP  +P
Sbjct: 183 YNPDKIPFV---PISGFEGDN-MIERSTNLDWYKGPTLLEALDQ-INEPKRPSDKPLRLP 242

Query: 300 IEDVFSIQGRGTVATGRVEQGTIKVGEEVEVLGLAQGPPLKTTVTGVEMFKKIL 323
           ++DV+ I G GTV  GRVE G IK G  V          L T V  VEM  + L
Sbjct: 243 LQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTG----LTTEVKSVEMHHESL 287

[Close]

BLAST of Cp4.1LG17g06600 vs. TAIR 10
Match: AT1G07940.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 139.0 bits (349), Expect = 8.7e-33
Identity = 102/294 (34.69%), Postives = 148/294 (50.34%), Query Frame = 0


Query: 60  RTKPHVNVGTIGHVDHGKTTLT-------AAITKVLAEEGKAKAIAFDE--------IDK 119
           + K H+N+  IGHVD GK+T T         I K + E  + +A   ++        +DK
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 120 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGA 179
              E++RGITI  A  ++ET K +   +D PGH D++KNMITG +Q D  +L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 180 MP-------QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLDLVEMELRELLSFYKFPG 239
                    QT+EH LLA  +GV  ++C  NK+DA          +  ++E+ S+ K  G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 240 ---DDIPIIRGSALSALQGTNEEIGKKAILQ------LMDAVDEYIPDPVRQLDKPFLMP 299
              D IP +    +S  +G N  I +   L       L++A+D+ I +P R  DKP  +P
Sbjct: 183 YNPDKIPFV---PISGFEGDN-MIERSTNLDWYKGPTLLEALDQ-INEPKRPSDKPLRLP 242

Query: 300 IEDVFSIQGRGTVATGRVEQGTIKVGEEVEVLGLAQGPPLKTTVTGVEMFKKIL 323
           ++DV+ I G GTV  GRVE G IK G  V          L T V  VEM  + L
Sbjct: 243 LQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTG----LTTEVKSVEMHHESL 287

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g06600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT91	7.3e-202	81.50	Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=TUFA PE=1...	[more]
Q0BUQ2	3.9e-155	70.23	Elongation factor Tu OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNI...	[more]
A5V604	4.3e-154	68.96	Elongation factor Tu OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 1027...	[more]
Q748X8	2.1e-153	68.27	Elongation factor Tu OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 ...	[more]
A5GAW4	2.1e-153	68.78	Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) OX=351605 GN=tuf1 ...	[more]

BLAST of Cp4.1LG17g06600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960442.1	3.09e-300	95.33	elongation factor Tu, mitochondrial-like [Cucurbita moschata] >XP_023515142.1 el...	[more]
KAG7025536.1	8.85e-300	95.11	Elongation factor Tu, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023004535.1	5.71e-296	94.00	elongation factor Tu, mitochondrial-like [Cucurbita maxima]	[more]
XP_022992519.1	4.10e-289	91.56	elongation factor Tu, mitochondrial [Cucurbita maxima]	[more]
XP_022953519.1	1.67e-288	91.56	elongation factor Tu, mitochondrial [Cucurbita moschata] >KAG6575887.1 Elongatio...	[more]

BLAST of Cp4.1LG17g06600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7F2	1.50e-300	95.33	Elongation factor Tu OS=Cucurbita moschata OX=3662 GN=LOC111461175 PE=3 SV=1	[more]
A0A6J1KUV3	2.76e-296	94.00	Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111497810 PE=3 SV=1	[more]
A0A6J1JXR8	1.99e-289	91.56	Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111488822 PE=3 SV=1	[more]
A0A6J1GPX9	8.08e-289	91.56	Elongation factor Tu OS=Cucurbita moschata OX=3662 GN=LOC111456042 PE=3 SV=1	[more]
A0A6J1D7X3	2.31e-288	91.56	Elongation factor Tu OS=Momordica charantia OX=3673 GN=LOC111018447 PE=3 SV=1	[more]

BLAST of Cp4.1LG17g06600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02930.1	5.2e-203	81.50	GTP binding Elongation factor Tu family protein	[more]
AT4G20360.1	7.9e-135	58.19	RAB GTPase homolog E1B	[more]
AT1G07920.1	8.7e-33	34.69	GTP binding Elongation factor Tu family protein	[more]
AT1G07930.1	8.7e-33	34.69	GTP binding Elongation factor Tu family protein	[more]
AT1G07940.1	8.7e-33	34.69	GTP binding Elongation factor Tu family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Translational (tr)-type GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 130..140 score: 63.79 coord: 183..192 score: 47.21 coord: 146..157 score: 58.26 coord: 110..118 score: 65.52 coord: 66..79 score: 73.94
IPR000795	Translational (tr)-type GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 62..255 e-value: 1.8E-54 score: 184.2
IPR000795	Translational (tr)-type GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 62..258 score: 58.068672
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 65..197 e-value: 8.3E-13 score: 46.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 54..257 e-value: 2.4E-72 score: 244.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 60..280
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 260..322 e-value: 2.5E-23 score: 84.4 coord: 323..369 e-value: 2.8E-13 score: 51.9
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 373..428 e-value: 8.3E-26 score: 91.6
None	No IPR available	PANTHER	PTHR43721	ELONGATION FACTOR TU-RELATED	coord: 11..428
None	No IPR available	PANTHER	PTHR43721:SF23	ELONGATION FACTOR TU	coord: 11..428
None	No IPR available	CDD	cd03707	EFTU_III	coord: 335..424 e-value: 4.65947E-56 score: 178.089
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal	PFAM	PF03143	GTP_EFTU_D3	coord: 334..427 e-value: 1.5E-35 score: 121.7
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 279..328 e-value: 4.4E-10 score: 39.8
IPR031157	Tr-type G domain, conserved site	PROSITE	PS00301	G_TR_1	coord: 103..118
IPR004541	Translation elongation factor EFTu/EF1A, bacterial/organelle	HAMAP	MF_00118_B	EF_Tu_B	coord: 53..429 score: 52.733849
IPR041709	Elongation factor Tu (EF-Tu), GTP-binding domain	CDD	cd01884	EF_Tu	coord: 63..257 e-value: 1.4718E-149 score: 420.452
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	SUPERFAMILY	50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	coord: 338..428
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 259..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g06600.1	Cp4.1LG17g06600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070125	mitochondrial translational elongation
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0006414	translational elongation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003746	translation elongation factor activity