Cp4.1LG17g05490 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g05490
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	Cp4.1LG17: 4531867 .. 4534940 (+)
RNA-Seq Expression	Cp4.1LG17g05490
Synteny	Cp4.1LG17g05490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATGTGAAATCTCACGTAAATTTTAATCATAATGCTTTTAACTCAAGTGATTAATTTAGTGTGCATTTAGAATGACGTTATAAACTTATTATGGATATCTAAATTTATTTAACTCAAATGAAAATTAATATCAAACGAAGCTATCGTTAACGTTAAAAGTACTTGAAACTGTTTCTTTCTCTCTTTTCTTCTTTCTTTTGAGTCGAGTCGGGTCGGGAAAGTGAGAGAAAGAAACTTAAAAGCCTCTAACTTTTGTGGCCTCCACTCATAACAAAGCATCCAAAAACAACAAGGAAAAAAATGATGCAAATTAAAGTTCCTTAACCCAAACCCTCTATTCAAAATCTTCCCCTCTCTCTCTCTCTCTCTCTCAACTTTCCTTCAACCTAAGCAAAGCAAAGCAAAGCAAAAGCAAGCCCTTTCTTATCTTCCTCCAAACTATTAGGCTCCAACTCTCATTTGACTTCAACTTTCATGCATACCTTAAACTTTGCCCAACAAAATCTTATAGCTTCTCGTTCTTCGTTCTTCGTTCTTCGTTCTTCGTTCTTCGTTCGCATAAGCTAAACAAATGATGGCTGGAAACCCTAATTGGTGGGGCATGTTTTCACCTTCCTTCTCTTCTTTTGCTGAACAGCCTCAATCATGGAGCCAACTTCTGTTGTATGTTCTTTATTTGGTTCATTTGTTTCTATATGTTCTTCAATATATGTAATCTTGTGATGTCTTCTTGGTGTTATCAGAGGAGAGGAAGAAAGGGTTTTGAACCAAACCCAGATGGGTCATTATCAACCAAAAAAGTTGGAGAATTGGGAGCACCAAATCTTGGATCATACCACCACCACCAATCCTTCACCACCTCCACCCCCTAACTTTGTTGATATTGTCAAACAAGAATTTTCCAACACCAACAAATTTCTTAACTTTTCTTCTCACAATACTAACTTCCCAGATCTCACCCACAATCAACCCGCCCATCACTTGCCCGAGGTGAGATTTAGTTGCAAGTCCTTCGAACAGTCGAACCACATCGCCCCTGTATCGGGTAGCGCATGTAAGAAGGCTAGAATTCATCCCCCATCTTCAAGCCAACCACCTCTAAAGGTAACATAAAACAACTGCAAAATTTCATCTTCGCATCTTTTTATATTCATGTTTAAAGTTCAAATTACGAAATAATAGGTGAGGAAGGAGAAACTCGTAGATCGAATAACCGCTCTTCACCAAATCGTTTCTCCATTCGGAAAGGTAAAATTATAAAATTATTCAATTCACCGACCTTACACAATGGTATGATATTATCTAAATTTTATTCCTTTCACCCCTGCCCTTTTGCCCTTTTTTGCAGACTGATACGGCGTCTGTGCTGTCAGAAGCAATTGGGTATATCAGATTTCTTCAGGGACAAATCGAGGTAATGCCATTTAAAAAATGCCATATATATGTGATTGTGGGTATCCTCGAAGTTAACTCCTTCTTGGGGTGGCAGGCACTTAGCTACCCATATCTGCGCAGTGCACCAAAGCATGTGAGGGACTCAGGAAGTGGTGTAAGTATCATACTCAAAGTGTTCATATTAATTTCATGCATTCATTAACATTCATTAAGAACATGAGTGGAGATTGTTTAGGAAGGAAGGGGGGTTAAAGTCGTAATCATGAAAGTCCAGTCTAAATGTAAAGCATCTGATAGACCATAAAGAAGAGAAATTAAAGGGGTGTAAAAAAAGAATAAGGTTCTCAGCTTTATACATTTTATATCTACTCATTATAAAGTAACCTCAAAAAAGTGTTGCTTTGGGGCTGCCTAATTGTTTTGGAATCCCAAAAAAAATATTATTTCAATTAAAAAAAAAAAAAAAACATTTCTCGTGTTTCAGTTTTGAGTATAATATTCTTTTGGTCGTCGTTCTGTTTGAAAATCTTATATTTTTACTTTAGTTTCTATTTCTTCGTGTGTTTCAAAATGTTTTAGGTACATATTATTCTCGAATTTTTAAAGACGATTCAATTTTAATTAAAAAAAAATACACCCATAAAACTCGATAACCCGACTAACTCGTACTAATCAACCTAAACCATAAAACTTGAGTTTAGGGTTTAGGGTTTAGGGTTGGATTGAGTTGGATTTTTTTCGGTTTGGGTTAGGTTGAATTTTTTAAAAATCGAAAAATTTGATTCTATTTGTGGGTTAACATTTTTTGATCGGGCCATTCCGATCAACTCGAAAGTAAGGTTAACTCAATTCTATTTTTAAAAAATTAAGAATATTTAATGTTAGTAACCGGTATTAGTGATGAGTTGACACTTGTAAATATTTGATGTAAGGATAAGTACAGGTCAACTCGATAATAGAGGGTTAGATTGTGTTGAGTTAGCTGAGTTGTGAGCTCTATTCAAATTGTTTGGATCGTTCGGTTGAATTGAGTTATGAACACTATTGTGGTTGCTTGAGCTACCGACCCAACGAACCCGAAATTTTAGTAATGAAATGGGTTTGATTTTCAGGGAGAAGAAATGAGAAGGGAAGAGAAGGCAGTGAAGGAGTTGAGGAGCAGAGGGCTGTGCTTGGTTCCAGTCTCATGCACACAACTGGTTGGAGGGGACAACAATGGAGCTGCTTACTGGGCTCCTGCTTATGGAAATGGGTTTTGATTTAATTTTAATTACAGCTCCTAATCATCAACAATTAAAGCTTTGGGAAATGGCTTAATTAGTATTAATATTATTATTATTATAATTAGTATAACATCATGACCAGTCACCCTTCTCAAAAGCCCTAAAAATGGCTGACTGCTCAAGATGCTATATATATATATATATATATATATATATATATATATATATATTCATATTGGCATTTAAATTAATCATAATGTTTTTATTGCCTAATTAATTTACTCTCCTACTCTTTTGAGCTGTAATCCACTACAAACCTTGTTATTAATTTCATAATTTCTAGTAGTGTTATGTGATGTATCAAAATACATTATTATATTATTCTCCTCTCTAAATTTGTATCATAGGTTATAGATTTGTTAGTTTATGAATAAATGAAGGAAAAATCGAGAAA

mRNA sequence

CCAATGTGAAATCTCACGTAAATTTTAATCATAATGCTTTTAACTCAAGTGATTAATTTAGTGTGCATTTAGAATGACGTTATAAACTTATTATGGATATCTAAATTTATTTAACTCAAATGAAAATTAATATCAAACGAAGCTATCGTTAACGTTAAAAGTACTTGAAACTGTTTCTTTCTCTCTTTTCTTCTTTCTTTTGAGTCGAGTCGGGTCGGGAAAGTGAGAGAAAGAAACTTAAAAGCCTCTAACTTTTGTGGCCTCCACTCATAACAAAGCATCCAAAAACAACAAGGAAAAAAATGATGCAAATTAAAGTTCCTTAACCCAAACCCTCTATTCAAAATCTTCCCCTCTCTCTCTCTCTCTCTCTCAACTTTCCTTCAACCTAAGCAAAGCAAAGCAAAGCAAAAGCAAGCCCTTTCTTATCTTCCTCCAAACTATTAGGCTCCAACTCTCATTTGACTTCAACTTTCATGCATACCTTAAACTTTGCCCAACAAAATCTTATAGCTTCTCGTTCTTCGTTCTTCGTTCTTCGTTCTTCGTTCTTCGTTCGCATAAGCTAAACAAATGATGGCTGGAAACCCTAATTGGTGGGGCATGTTTTCACCTTCCTTCTCTTCTTTTGCTGAACAGCCTCAATCATGGAGCCAACTTCTGTTAGGAGAGGAAGAAAGGGTTTTGAACCAAACCCAGATGGGTCATTATCAACCAAAAAAGTTGGAGAATTGGGAGCACCAAATCTTGGATCATACCACCACCACCAATCCTTCACCACCTCCACCCCCTAACTTTGTTGATATTGTCAAACAAGAATTTTCCAACACCAACAAATTTCTTAACTTTTCTTCTCACAATACTAACTTCCCAGATCTCACCCACAATCAACCCGCCCATCACTTGCCCGAGGTGAGATTTAGTTGCAAGTCCTTCGAACAGTCGAACCACATCGCCCCTGTATCGGGTAGCGCATGTAAGAAGGCTAGAATTCATCCCCCATCTTCAAGCCAACCACCTCTAAAGGTGAGGAAGGAGAAACTCGTAGATCGAATAACCGCTCTTCACCAAATCGTTTCTCCATTCGGAAAGACTGATACGGCGTCTGTGCTGTCAGAAGCAATTGGGTATATCAGATTTCTTCAGGGACAAATCGAGGCACTTAGCTACCCATATCTGCGCAGTGCACCAAAGCATGTGAGGGACTCAGGAAGTGGTGGAGAAGAAATGAGAAGGGAAGAGAAGGCAGTGAAGGAGTTGAGGAGCAGAGGGCTGTGCTTGGTTCCAGTCTCATGCACACAACTGGTTGGAGGGGACAACAATGGAGCTGCTTACTGGGCTCCTGCTTATGGAAATGGGTTTTGATTTAATTTTAATTACAGCTCCTAATCATCAACAATTAAAGCTTTGGGAAATGGCTTAATTAGTATTAATATTATTATTATTATAATTAGTATAACATCATGACCAGTCACCCTTCTCAAAAGCCCTAAAAATGGCTGACTGCTCAAGATGCTATATATATATATATATATATATATATATATATATATATATATTCATATTGGCATTTAAATTAATCATAATGTTTTTATTGCCTAATTAATTTACTCTCCTACTCTTTTGAGCTGTAATCCACTACAAACCTTGTTATTAATTTCATAATTTCTAGTAGTGTTATGTGATGTATCAAAATACATTATTATATTATTCTCCTCTCTAAATTTGTATCATAGGTTATAGATTTGTTAGTTTATGAATAAATGAAGGAAAAATCGAGAAA

Coding sequence (CDS)

ATGATGGCTGGAAACCCTAATTGGTGGGGCATGTTTTCACCTTCCTTCTCTTCTTTTGCTGAACAGCCTCAATCATGGAGCCAACTTCTGTTAGGAGAGGAAGAAAGGGTTTTGAACCAAACCCAGATGGGTCATTATCAACCAAAAAAGTTGGAGAATTGGGAGCACCAAATCTTGGATCATACCACCACCACCAATCCTTCACCACCTCCACCCCCTAACTTTGTTGATATTGTCAAACAAGAATTTTCCAACACCAACAAATTTCTTAACTTTTCTTCTCACAATACTAACTTCCCAGATCTCACCCACAATCAACCCGCCCATCACTTGCCCGAGGTGAGATTTAGTTGCAAGTCCTTCGAACAGTCGAACCACATCGCCCCTGTATCGGGTAGCGCATGTAAGAAGGCTAGAATTCATCCCCCATCTTCAAGCCAACCACCTCTAAAGGTGAGGAAGGAGAAACTCGTAGATCGAATAACCGCTCTTCACCAAATCGTTTCTCCATTCGGAAAGACTGATACGGCGTCTGTGCTGTCAGAAGCAATTGGGTATATCAGATTTCTTCAGGGACAAATCGAGGCACTTAGCTACCCATATCTGCGCAGTGCACCAAAGCATGTGAGGGACTCAGGAAGTGGTGGAGAAGAAATGAGAAGGGAAGAGAAGGCAGTGAAGGAGTTGAGGAGCAGAGGGCTGTGCTTGGTTCCAGTCTCATGCACACAACTGGTTGGAGGGGACAACAATGGAGCTGCTTACTGGGCTCCTGCTTATGGAAATGGGTTTTGA

Protein sequence

MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILDHTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQPAHHLPEVRFSCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF

Homology

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BLAST of Cp4.1LG17g05490 vs. ExPASy Swiss-Prot
Match: Q8S3D1 (Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 8.0e-42
Identity = 122/319 (38.24%), Postives = 156/319 (48.90%), Query Frame = 0


Query: 13  SPSFSSFAEQ----PQSWS-------QLLLGEEERVLNQTQMGHYQPK---------KLE 72
           +P+ SS+ E     P+SWS        L++GEEER+       H+  +         +LE
Sbjct: 86  NPNLSSWLESNDLPPESWSLSQLLLGGLMMGEEERLEMMNHHNHHDEQQHHGFQGKIRLE 145

Query: 73  NWEHQILDHTTTTN-------------------PSPPPPPNFVDIVKQEFSNTNKFLNFS 132
           NWE Q+L H   +                     SP  PPN   +     ++ N   +  
Sbjct: 146 NWEEQVLSHQQASMVAVDIKQEGNINNNNGYVISSPNSPPNKSCVTTTTTTSLNSNDDNI 205

Query: 133 SHNTNFPDLTHNQPAHHLPEVRFSCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVR 192
           ++N N  D + N    HL E R +        +   + GS  KK R+ P  SSQ  LKVR
Sbjct: 206 NNNNNMLDFSSNHNGLHLSEGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQSTLKVR 265

Query: 193 KEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSA-------P 252
           KEKL  RI ALHQ+VSPFGKTDTASVLSEAIGYIRFLQ QIEALS+PY  +         
Sbjct: 266 KEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQ 325

Query: 253 KHVRD------------------------SGSGGEEMRREEKAVKELRSRGLCLVPVSCT 262
           +H++                         S S  +     E+  K+LRSRGLCLVP+SCT
Sbjct: 326 QHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCT 385

[Close]

BLAST of Cp4.1LG17g05490 vs. ExPASy Swiss-Prot
Match: Q7XHI5 (Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.3e-38
Identity = 125/309 (40.45%), Postives = 156/309 (50.49%), Query Frame = 0


Query: 13  SPSFSSFAE-------QPQSWSQLLL-----GEEERV------LNQTQMGHYQPKKLENW 72
           +P+FSS+ E       QP S SQLLL     GEEE++       +Q Q   YQ K+++NW
Sbjct: 75  NPNFSSWLEMSDLPLDQPWSLSQLLLGGLMMGEEEKMEMMNHHHHQNQHQSYQAKRIQNW 134

Query: 73  EHQILDHTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSH------------NTNFPDL 132
           E Q+L H  +              +KQE SN N +   SS             NTN  + 
Sbjct: 135 EEQVLRHQAS--------------MKQESSNNNSYGIMSSPNSPPNKSCATIINTNEDNN 194

Query: 133 THNQPAHHLPEVRFSCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRIT 192
            +     +L E    C S E        S  A KK ++  P SSQ  LKVRKEKL  RI 
Sbjct: 195 NNIHSGLNLSE----CNSSEMIG-----SSFANKKPKLQVP-SSQSTLKVRKEKLGGRIA 254

Query: 193 ALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKH-------------- 252
           +LHQ+VSPFGKTDTASVLSEAIGYIRFL  QIEALS PY  +  ++              
Sbjct: 255 SLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRNNMMHQHAQRNMNGI 314

Query: 253 -----------------VRDSGSGGEEMRREEKAVKELRSRGLCLVPVSCTQLVGGDNNG 261
                            V  S +  ++    E+ +K+LRSRGLCLVP+SCT  VG D NG
Sbjct: 315 FPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVGSD-NG 358

[Close]

BLAST of Cp4.1LG17g05490 vs. ExPASy Swiss-Prot
Match: Q9SFZ3 (Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 8.5e-28
Identity = 80/171 (46.78%), Postives = 101/171 (59.06%), Query Frame = 0


Query: 105 NQPAHHLPEVRFSCKSFEQSNH---IAPVSG-SACKKARIHPPSSSQPPLKVRKEKLVDR 164
           + P H +       ++ E   H   +A  +G +A KK R+   SS  PP KVRKEKL DR
Sbjct: 283 SSPTHQMEMFSNEPQTSEGKRHNFLMATKAGENASKKPRVESRSSC-PPFKVRKEKLGDR 342

Query: 165 ITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLR-SAPKHVRDSGSGGEEM 224
           I AL Q+VSPFGKTDTASVL EAIGYI+FLQ QIE LS PY+R S  +  + S    +  
Sbjct: 343 IAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQLVSQSQ 402

Query: 225 RREEKAVKELRSRGLCLVPVSCTQLVGGDNN------GAAYW--APAYGNG 263
             +E+  ++LRSRGLCLVP+SC   V GD        G  +W   P +G G
Sbjct: 403 EGDEEETRDLRSRGLCLVPLSCMTYVTGDGGDGGGGVGTGFWPTPPGFGGG 452

[Close]

BLAST of Cp4.1LG17g05490 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-24
Identity = 62/128 (48.44%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 133 SACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQG 192
           SA KK R+  P S  P  KVRKE L D+IT+L Q+VSPFGKTDTASVL EAI YI+FL  
Sbjct: 263 SAAKKPRVTTP-SPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHD 322

Query: 193 QIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCLVPVSCTQLVGGDNNGA 252
           Q+  LS PY++    + +     G+   ++E    ELR  GLCLVP+S T  V  +   A
Sbjct: 323 QVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETT-A 382

Query: 253 AYWAPAYG 261
            +W P +G
Sbjct: 383 DFWTPTFG 388

[Close]

BLAST of Cp4.1LG17g05490 vs. ExPASy Swiss-Prot
Match: Q9FYJ6 (Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23
Identity = 72/183 (39.34%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 79  VKQEFSNTNKFLNFSSHNTNFPDLTHNQPAHHLPEVRFSCKSFEQSNHIAPVSGSACKKA 138
           +   F    K LN S  N        +Q A  L  VR    +  +      +S    KKA
Sbjct: 139 INPSFKPCFKALNVSEFNKK-----EHQTA-SLAAVRLGTTNAGKKKRCEEISDEVSKKA 198

Query: 139 RIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALS 198
           +    S+  P  ++ K KL D+IT L QIVSPFGKTDTASVL EAI YI F Q Q++ LS
Sbjct: 199 KCSEGSTLSPEKELPKAKLRDKITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLS 258

Query: 199 YPYLRSAPKHVRDSGSGGEEMRREEKAVK--ELRSRGLCLVPVSCTQLVGGDNNGAAYWA 258
            PY++++   ++D   G +     ++  K  +LRSRGLCLVP+S T +   DN+   YW 
Sbjct: 259 TPYMKNS--SMKDPWGGWDREDHNKRGPKHLDLRSRGLCLVPISYTPIAYRDNSATDYWN 313

Query: 259 PAY 260
           P Y
Sbjct: 319 PTY 313

[Close]

BLAST of Cp4.1LG17g05490 vs. NCBI nr
Match: XP_023515291.1 (transcription factor bHLH68-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 540 bits (1391), Expect = 7.43e-194
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD 60

Query: 61  HTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQPAHHLPEVRFSCKS 120
           HTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQPAHHLPEVRFSCKS
Sbjct: 61  HTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQPAHHLPEVRFSCKS 120

Query: 121 FEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVL 180
           FEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVL
Sbjct: 121 FEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVL 180

Query: 181 SEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCLVPVS 240
           SEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCLVPVS
Sbjct: 181 SEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCLVPVS 240

Query: 241 CTQLVGGDNNGAAYWAPAYGNGF 263
           CTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 CTQLVGGDNNGAAYWAPAYGNGF 263

[Close]

BLAST of Cp4.1LG17g05490 vs. NCBI nr
Match: XP_022964017.1 (transcription factor bHLH68-like [Cucurbita moschata])

HSP 1 Score: 525 bits (1352), Expect = 7.34e-188
Identity = 259/266 (97.37%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD 60

Query: 61  HTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQPA---HHLPEVRFS 120
           HTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSS+NTNFPDLTHNQPA    HLPEVRFS
Sbjct: 61  HTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPAAAADHLPEVRFS 120

Query: 121 CKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTA 180
           CKSFEQ NHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTA
Sbjct: 121 CKSFEQLNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTA 180

Query: 181 SVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCLV 240
           SVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRD+GSGGEEMRREEKAVKELRSRGLCLV
Sbjct: 181 SVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSRGLCLV 240

Query: 241 PVSCTQLVGGDNNGAAYWAPAYGNGF 263
           PVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 PVSCTQLVGGDNNGAAYWAPAYGNGF 266

[Close]

BLAST of Cp4.1LG17g05490 vs. NCBI nr
Match: XP_023000383.1 (transcription factor bHLH68-like [Cucurbita maxima])

HSP 1 Score: 521 bits (1341), Expect = 3.62e-186
Identity = 258/267 (96.63%), Postives = 261/267 (97.75%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD 60

Query: 61  HTTTT-NPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQP---AHHLPEVRF 120
           HTTTT NPSPPPPPNFVDIVKQEFSNTNKFLNFSS+NTNFPDL HNQP   A HLPEVRF
Sbjct: 61  HTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLIHNQPTAAADHLPEVRF 120

Query: 121 SCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDT 180
           SCKSFEQSNHIAP+SGSACKKAR+HPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDT
Sbjct: 121 SCKSFEQSNHIAPISGSACKKARVHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDT 180

Query: 181 ASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCL 240
           ASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCL
Sbjct: 181 ASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCL 240

Query: 241 VPVSCTQLVGGDNNGAAYWAPAYGNGF 263
           VPVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 VPVSCTQLVGGDNNGAAYWAPAYGNGF 267

[Close]

BLAST of Cp4.1LG17g05490 vs. NCBI nr
Match: KAG7025815.1 (Transcription factor bHLH68 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 516 bits (1328), Expect = 4.02e-184
Identity = 259/271 (95.57%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGH-YQPKKLENWEHQIL 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGH YQPKKLENWEHQIL
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60

Query: 61  DHTTTT--NPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQP-----AHHLP 120
           DHTTTT  NPSPPPPPNFVDIVKQEFSNTNKFLNFSS+NTNFPDLTHNQP     A HLP
Sbjct: 61  DHTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHLP 120

Query: 121 EVRFSCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180
           EVRFSCKSFEQSNHIAPVSG+ACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG
Sbjct: 121 EVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFG 180

Query: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSR 240
           KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRD+GSGGEEMRREEKAVKELRSR
Sbjct: 181 KTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSR 240

Query: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 263
           GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 GLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 271

[Close]

BLAST of Cp4.1LG17g05490 vs. NCBI nr
Match: KAG6593472.1 (Transcription factor basic helix-loop-helix 68, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 512 bits (1319), Expect = 9.83e-183
Identity = 258/272 (94.85%), Postives = 261/272 (95.96%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGH-YQPKKLENWEHQIL 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGH YQPKKLENWEHQIL
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHHYQPKKLENWEHQIL 60

Query: 61  DHTTTT---NPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQP-----AHHL 120
           DHTTTT   NPSPPPPPNFVDIVKQEFSNTNKFLNFSS+NTNFPDLTHNQP     A HL
Sbjct: 61  DHTTTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPPAAAAADHL 120

Query: 121 PEVRFSCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPF 180
           PEVRFSCKSFEQSNHIAPVSG+ACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPF
Sbjct: 121 PEVRFSCKSFEQSNHIAPVSGNACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPF 180

Query: 181 GKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRS 240
           GKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRD+GSGGEEMRREEKAVKELRS
Sbjct: 181 GKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRS 240

Query: 241 RGLCLVPVSCTQLVGGDNNGAAYWAPAYGNGF 263
           RGLCLVPVSCTQLVGGDNNGAAYWAPAYGN F
Sbjct: 241 RGLCLVPVSCTQLVGGDNNGAAYWAPAYGNEF 272

[Close]

BLAST of Cp4.1LG17g05490 vs. ExPASy TrEMBL
Match: A0A6J1HGP4 (transcription factor bHLH68-like OS=Cucurbita moschata OX=3662 GN=LOC111464167 PE=4 SV=1)

HSP 1 Score: 525 bits (1352), Expect = 3.55e-188
Identity = 259/266 (97.37%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD 60

Query: 61  HTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQPA---HHLPEVRFS 120
           HTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSS+NTNFPDLTHNQPA    HLPEVRFS
Sbjct: 61  HTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLTHNQPAAAADHLPEVRFS 120

Query: 121 CKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTA 180
           CKSFEQ NHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTA
Sbjct: 121 CKSFEQLNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTA 180

Query: 181 SVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCLV 240
           SVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRD+GSGGEEMRREEKAVKELRSRGLCLV
Sbjct: 181 SVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDAGSGGEEMRREEKAVKELRSRGLCLV 240

Query: 241 PVSCTQLVGGDNNGAAYWAPAYGNGF 263
           PVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 PVSCTQLVGGDNNGAAYWAPAYGNGF 266

[Close]

BLAST of Cp4.1LG17g05490 vs. ExPASy TrEMBL
Match: A0A6J1KMG6 (transcription factor bHLH68-like OS=Cucurbita maxima OX=3661 GN=LOC111494639 PE=4 SV=1)

HSP 1 Score: 521 bits (1341), Expect = 1.75e-186
Identity = 258/267 (96.63%), Postives = 261/267 (97.75%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD 60
           MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD
Sbjct: 1   MMAGNPNWWGMFSPSFSSFAEQPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQILD 60

Query: 61  HTTTT-NPSPPPPPNFVDIVKQEFSNTNKFLNFSSHNTNFPDLTHNQP---AHHLPEVRF 120
           HTTTT NPSPPPPPNFVDIVKQEFSNTNKFLNFSS+NTNFPDL HNQP   A HLPEVRF
Sbjct: 61  HTTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSNNTNFPDLIHNQPTAAADHLPEVRF 120

Query: 121 SCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDT 180
           SCKSFEQSNHIAP+SGSACKKAR+HPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDT
Sbjct: 121 SCKSFEQSNHIAPISGSACKKARVHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDT 180

Query: 181 ASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCL 240
           ASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCL
Sbjct: 181 ASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCL 240

Query: 241 VPVSCTQLVGGDNNGAAYWAPAYGNGF 263
           VPVSCTQLVGGDNNGAAYWAPAYGNGF
Sbjct: 241 VPVSCTQLVGGDNNGAAYWAPAYGNGF 267

[Close]

BLAST of Cp4.1LG17g05490 vs. ExPASy TrEMBL
Match: A0A6J1CYC1 (transcription factor bHLH68-like OS=Momordica charantia OX=3673 GN=LOC111015393 PE=4 SV=1)

HSP 1 Score: 317 bits (812), Expect = 2.01e-105
Identity = 193/320 (60.31%), Postives = 212/320 (66.25%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPSFSSFAEQ---------------PQSWSQLLLGEEERVLN-QTQMG 60
           MMAGNPNWW +F PS SS +                 P SWSQLLLG+E+RV+N QTQMG
Sbjct: 1   MMAGNPNWWAIFPPSSSSSSSSLFPPQFPSNFSDHLHPHSWSQLLLGDEDRVINNQTQMG 60

Query: 61  HYQPKKLENWEHQILDHTTTTNPSPPPPPNFVDIVKQEFSN------------------- 120
           HYQPK LENWE QIL++    +P      NFVDIVKQE SN                   
Sbjct: 61  HYQPKNLENWEDQILNNNHNQSP------NFVDIVKQEVSNNRDQSLILQPDSTLTSSSS 120

Query: 121 -TNKFLNFSSHNTNFPDLTHNQPA-HHLPEVRFSCKSFEQSNHIAPVSGSACKKARIHPP 180
            +NKFLNF+ +N+N PD   NQ A  H PE          SN  A  SG ACKKAR+HPP
Sbjct: 121 HSNKFLNFTYNNSN-PDHNINQSASQHSPE----------SNRSA-ASGGACKKARVHPP 180

Query: 181 SSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLR 240
           SSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLR
Sbjct: 181 SSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLR 240

Query: 241 S-APKHVRDSG----------------SGGEEMRREEKAVK---ELRSRGLCLVPVSCTQ 263
           S APK +R+S                 + GEEM  +EK +K   +LRSRGLCLVPVSCTQ
Sbjct: 241 SSAPKDLRNSQQPALLNDSCPRRKATLNQGEEMMNQEKPLKPLKDLRSRGLCLVPVSCTQ 300

[Close]

BLAST of Cp4.1LG17g05490 vs. ExPASy TrEMBL
Match: A0A0A0K957 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447040 PE=4 SV=1)

HSP 1 Score: 294 bits (753), Expect = 1.52e-96
Identity = 179/279 (64.16%), Postives = 204/279 (73.12%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPS-FSSFAE-QPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQI 60
           MMAGNPNWW MF PS FSSFA+ QPQSWSQLLLG+E+RVLNQTQM HYQPKKLENWE QI
Sbjct: 1   MMAGNPNWWAMFPPSSFSSFADHQPQSWSQLLLGDEDRVLNQTQMSHYQPKKLENWEDQI 60

Query: 61  LDHTTTTNPSPPPPPNFVD--IVKQE--FSN--------------TNKFLNFSSHNTNFP 120
           L++  T++ S      FVD  IVKQ+   SN              TNKFL+FSS NTN  
Sbjct: 61  LNNNITSS-SQFEASTFVDNIIVKQQQLHSNNNILHPNTIISSHHTNKFLDFSS-NTNNN 120

Query: 121 DLTHN------QPAHHLPEVRFSCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRK 180
           +  HN      +PA   P+      S    N     +G ACKKAR+HPPSSSQPPLKVRK
Sbjct: 121 NQDHNTNHLALRPAAPDPDHL----SESSKNQSIGSTGGACKKARVHPPSSSQPPLKVRK 180

Query: 181 EKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGS 240
           EKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYL+SAPK +R+S  
Sbjct: 181 EKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLQSAPKDLRNSQP 240

Query: 241 -GGEEMRR---EEKAVKELRSRGLCLVPVSCTQLVGGDN 249
            GGEEM +   E++ +K+LRS+GLCLVP+SCT LVG D+
Sbjct: 241 MGGEEMMKNEDEKRLMKDLRSKGLCLVPLSCTHLVGADH 273

[Close]

BLAST of Cp4.1LG17g05490 vs. ExPASy TrEMBL
Match: A0A5D3BYE2 (Transcription factor bHLH68-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002120 PE=4 SV=1)

HSP 1 Score: 269 bits (687), Expect = 7.50e-87
Identity = 162/273 (59.34%), Postives = 183/273 (67.03%), Query Frame = 0


Query: 1   MMAGNPNWWGMFSPS-FSSFAE-QPQSWSQLLLGEEERVLNQTQMGHYQPKKLENWEHQI 60
           MMAGNPNWW MF PS F+SFA+ QPQSWSQLLLG+E+RVLNQTQM HYQPKKLENWE QI
Sbjct: 1   MMAGNPNWWAMFPPSSFNSFADHQPQSWSQLLLGDEDRVLNQTQMSHYQPKKLENWEDQI 60

Query: 61  LDHTTTTNPSPPPPPNFVD--IVKQEFSNTN---------------KFLNFSSHNTNFPD 120
           L++  T++ S     NFVD  IVKQ+  +TN               KFL+FSSH  N  D
Sbjct: 61  LNNNNTSS-SQFEASNFVDNIIVKQQLHSTNNNILHPTSISSHHTNKFLDFSSHTNNNQD 120

Query: 121 LTHNQPAHHLPEVRFSCKSFEQSNH-IAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDR 180
              N  A           S    NH +   +G ACKKAR+HPPSSSQPPLKVRKEKLVDR
Sbjct: 121 HNTNHLALRAAGPDPDHSSESSKNHSVGGSTGGACKKARVHPPSSSQPPLKVRKEKLVDR 180

Query: 181 ITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKHVRDSGSGGEEMR 240
           ITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIE                    GEEM 
Sbjct: 181 ITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIE--------------------GEEMM 240

Query: 241 REE---KAVKELRSRGLCLVPVSCTQLVGGDNN 250
           + E   + VK+LRS+GLCLVP+SCT LVG D++
Sbjct: 241 KNEDQKRLVKDLRSKGLCLVPLSCTHLVGADHH 252

[Close]

BLAST of Cp4.1LG17g05490 vs. TAIR 10
Match: AT4G29100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 5.7e-43
Identity = 122/319 (38.24%), Postives = 156/319 (48.90%), Query Frame = 0


Query: 13  SPSFSSFAEQ----PQSWS-------QLLLGEEERVLNQTQMGHYQPK---------KLE 72
           +P+ SS+ E     P+SWS        L++GEEER+       H+  +         +LE
Sbjct: 86  NPNLSSWLESNDLPPESWSLSQLLLGGLMMGEEERLEMMNHHNHHDEQQHHGFQGKIRLE 145

Query: 73  NWEHQILDHTTTTN-------------------PSPPPPPNFVDIVKQEFSNTNKFLNFS 132
           NWE Q+L H   +                     SP  PPN   +     ++ N   +  
Sbjct: 146 NWEEQVLSHQQASMVAVDIKQEGNINNNNGYVISSPNSPPNKSCVTTTTTTSLNSNDDNI 205

Query: 133 SHNTNFPDLTHNQPAHHLPEVRFSCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVR 192
           ++N N  D + N    HL E R +        +   + GS  KK R+ P  SSQ  LKVR
Sbjct: 206 NNNNNMLDFSSNHNGLHLSEGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQSTLKVR 265

Query: 193 KEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSA-------P 252
           KEKL  RI ALHQ+VSPFGKTDTASVLSEAIGYIRFLQ QIEALS+PY  +         
Sbjct: 266 KEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQ 325

Query: 253 KHVRD------------------------SGSGGEEMRREEKAVKELRSRGLCLVPVSCT 262
           +H++                         S S  +     E+  K+LRSRGLCLVP+SCT
Sbjct: 326 QHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCT 385

[Close]

BLAST of Cp4.1LG17g05490 vs. TAIR 10
Match: AT2G20100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.8e-39
Identity = 125/309 (40.45%), Postives = 156/309 (50.49%), Query Frame = 0


Query: 13  SPSFSSFAE-------QPQSWSQLLL-----GEEERV------LNQTQMGHYQPKKLENW 72
           +P+FSS+ E       QP S SQLLL     GEEE++       +Q Q   YQ K+++NW
Sbjct: 75  NPNFSSWLEMSDLPLDQPWSLSQLLLGGLMMGEEEKMEMMNHHHHQNQHQSYQAKRIQNW 134

Query: 73  EHQILDHTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSH------------NTNFPDL 132
           E Q+L H  +              +KQE SN N +   SS             NTN  + 
Sbjct: 135 EEQVLRHQAS--------------MKQESSNNNSYGIMSSPNSPPNKSCATIINTNEDNN 194

Query: 133 THNQPAHHLPEVRFSCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRIT 192
            +     +L E    C S E        S  A KK ++  P SSQ  LKVRKEKL  RI 
Sbjct: 195 NNIHSGLNLSE----CNSSEMIG-----SSFANKKPKLQVP-SSQSTLKVRKEKLGGRIA 254

Query: 193 ALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLRSAPKH-------------- 252
           +LHQ+VSPFGKTDTASVLSEAIGYIRFL  QIEALS PY  +  ++              
Sbjct: 255 SLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRNNMMHQHAQRNMNGI 314

Query: 253 -----------------VRDSGSGGEEMRREEKAVKELRSRGLCLVPVSCTQLVGGDNNG 261
                            V  S +  ++    E+ +K+LRSRGLCLVP+SCT  VG D NG
Sbjct: 315 FPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVGSD-NG 358

[Close]

BLAST of Cp4.1LG17g05490 vs. TAIR 10
Match: AT1G27660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 6.1e-29
Identity = 80/171 (46.78%), Postives = 101/171 (59.06%), Query Frame = 0


Query: 105 NQPAHHLPEVRFSCKSFEQSNH---IAPVSG-SACKKARIHPPSSSQPPLKVRKEKLVDR 164
           + P H +       ++ E   H   +A  +G +A KK R+   SS  PP KVRKEKL DR
Sbjct: 283 SSPTHQMEMFSNEPQTSEGKRHNFLMATKAGENASKKPRVESRSSC-PPFKVRKEKLGDR 342

Query: 165 ITALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPYLR-SAPKHVRDSGSGGEEM 224
           I AL Q+VSPFGKTDTASVL EAIGYI+FLQ QIE LS PY+R S  +  + S    +  
Sbjct: 343 IAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQLVSQSQ 402

Query: 225 RREEKAVKELRSRGLCLVPVSCTQLVGGDNN------GAAYW--APAYGNG 263
             +E+  ++LRSRGLCLVP+SC   V GD        G  +W   P +G G
Sbjct: 403 EGDEEETRDLRSRGLCLVPLSCMTYVTGDGGDGGGGVGTGFWPTPPGFGGG 452

[Close]

BLAST of Cp4.1LG17g05490 vs. TAIR 10
Match: AT2G20100.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-27
Identity = 96/219 (43.84%), Postives = 116/219 (52.97%), Query Frame = 0


Query: 13  SPSFSSFAE-------QPQSWSQLLL-----GEEERV------LNQTQMGHYQPKKLENW 72
           +P+FSS+ E       QP S SQLLL     GEEE++       +Q Q   YQ K+++NW
Sbjct: 75  NPNFSSWLEMSDLPLDQPWSLSQLLLGGLMMGEEEKMEMMNHHHHQNQHQSYQAKRIQNW 134

Query: 73  EHQILDHTTTTNPSPPPPPNFVDIVKQEFSNTNKFLNFSSH------------NTNFPDL 132
           E Q+L H  +              +KQE SN N +   SS             NTN  + 
Sbjct: 135 EEQVLRHQAS--------------MKQESSNNNSYGIMSSPNSPPNKSCATIINTNEDNN 194

Query: 133 THNQPAHHLPEVRFSCKSFEQSNHIAPVSGSACKKARIHPPSSSQPPLKVRKEKLVDRIT 192
            +     +L E    C S E        S  A KK ++  P SSQ  LKVRKEKL  RI 
Sbjct: 195 NNIHSGLNLSE----CNSSEMIG-----SSFANKKPKLQVP-SSQSTLKVRKEKLGGRIA 254

Query: 193 ALHQIVSPFGKTDTASVLSEAIGYIRFLQGQIEALSYPY 202
           +LHQ+VSPFGKTDTASVLSEAIGYIRFL  QIEALS PY
Sbjct: 255 SLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPY 269

[Close]

BLAST of Cp4.1LG17g05490 vs. TAIR 10
Match: AT1G61660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 2.4e-25
Identity = 62/128 (48.44%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 133 SACKKARIHPPSSSQPPLKVRKEKLVDRITALHQIVSPFGKTDTASVLSEAIGYIRFLQG 192
           SA KK R+  P S  P  KVRKE L D+IT+L Q+VSPFGKTDTASVL EAI YI+FL  
Sbjct: 263 SAAKKPRVTTP-SPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHD 322

Query: 193 QIEALSYPYLRSAPKHVRDSGSGGEEMRREEKAVKELRSRGLCLVPVSCTQLVGGDNNGA 252
           Q+  LS PY++    + +     G+   ++E    ELR  GLCLVP+S T  V  +   A
Sbjct: 323 QVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETT-A 382

Query: 253 AYWAPAYG 261
            +W P +G
Sbjct: 383 DFWTPTFG 388

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g05490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3D1	8.0e-42	38.24	Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2	[more]
Q7XHI5	5.3e-38	40.45	Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=...	[more]
Q9SFZ3	8.5e-28	46.78	Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=...	[more]
Q94JL3	3.4e-24	48.44	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q9FYJ6	1.7e-23	39.34	Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=...	[more]

BLAST of Cp4.1LG17g05490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515291.1	7.43e-194	100.00	transcription factor bHLH68-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964017.1	7.34e-188	97.37	transcription factor bHLH68-like [Cucurbita moschata]	[more]
XP_023000383.1	3.62e-186	96.63	transcription factor bHLH68-like [Cucurbita maxima]	[more]
KAG7025815.1	4.02e-184	95.57	Transcription factor bHLH68 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6593472.1	9.83e-183	94.85	Transcription factor basic helix-loop-helix 68, partial [Cucurbita argyrosperma ...	[more]

BLAST of Cp4.1LG17g05490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGP4	3.55e-188	97.37	transcription factor bHLH68-like OS=Cucurbita moschata OX=3662 GN=LOC111464167 P...	[more]
A0A6J1KMG6	1.75e-186	96.63	transcription factor bHLH68-like OS=Cucurbita maxima OX=3661 GN=LOC111494639 PE=...	[more]
A0A6J1CYC1	2.01e-105	60.31	transcription factor bHLH68-like OS=Momordica charantia OX=3673 GN=LOC111015393 ...	[more]
A0A0A0K957	1.52e-96	64.16	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447040 PE=4 S...	[more]
A0A5D3BYE2	7.50e-87	59.34	Transcription factor bHLH68-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Cp4.1LG17g05490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29100.1	5.7e-43	38.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.1	3.8e-39	40.45	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27660.1	6.1e-29	46.78	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.2	1.1e-27	43.84	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.1	2.4e-25	48.44	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 151..211 e-value: 4.3E-6 score: 28.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 151..203
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 14..249
None	No IPR available	PANTHER	PTHR16223:SF53	BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 14..249
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 151..198 e-value: 1.1422E-20 score: 80.6883
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 141..190 score: 10.867585

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g05490.1	Cp4.1LG17g05490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding