Cp4.1LG17g05180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g05180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Profilin
Location	Cp4.1LG17: 4370964 .. 4373495 (+)
RNA-Seq Expression	Cp4.1LG17g05180
Synteny	Cp4.1LG17g05180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATCTCAAAGCCATAACCAAATCGACATGCGAGACTGAAGAGCAACTAGAAGAAGAACGAAGAAGAAGAGAAGAAAACTTTGCCGCTAATCGAAATTCGAAGTTCCGTTGTTGAAGCTTGAAAATGTCGTGGCAAACTTACGTCGATGATCACCTCATGTGTGAGATTGAAGGCAACCATCTCACCTCCGCCGCCATCATTGGACATGACGCCAGTGTTTGGGCGCAGAGCGCCTCTTTCCCTCAGGTTATCGCCATTTTTTATTTCGTTTGTTGTGTGTGTGTGATTCTTTGTTACGTTTTCGCTCTTGTTGAGAGAAATTCGATTGGAATCTGGTCTTATAATCGGCATTTTGTTTTGTTTTGTTTTGATTTTATTTGTATCAGTTCTTTATTTTTTGTTGATTTCATTTGAGCGGAGATGGAATTCGTATGATGATGAGACCTCTGTTCTATTCGGGCAGAGTGCCTCTTTCCTTCAGGTTATCGCCATTTTCGATTTCGTTTGCTGTGTGTGTGATTCTATGTTACGTTATCTCTCTTGTTGAGAGAAATTCGATTGGAATCTGGTCTTATAATCGGCATTTTGTATTGTTTTGTTTTGATTTTATTTGTATCAGTTCTTTATTTTTTGTTGATTTCATTTGAGCGGAGATGGAATTCGTATGATGATGAGACCTCTGTTCTATTCGGGCAGAGTGCCTCTTTCCTTCAGGTTATCGCCATTTTCGATTTCGTTTGCTGTGTGTGTGATTCTATGTTACGTTATCTCTCTTGTTGAGAGAAATTCGATTGGAATCTGGTCTTATAATCGGCATTTTGTATTGTTTTGTTTTGATTTTATTTGTATCAGTTCTTTATTTTTTGTTGATTTGATTTGAGCGGAGATGGAACTCGTATGATGATGAGACCTCTGTTCTATTCGTATAAATCATCTGTTGCAGTGATGGATGATGAGGAATATACGATTTTCATTTTCTTCTCTCTTTTGGATAATTAAACTGATTAATCGTAATCTCCAATGTTAAGATCAGGAATTCATAGAGTAGAAACTGAAACAAATATTAACCGCAAGGTTTTTCCTGATTAATAGTTTATGAAGAATTGCATTCTTTGACGCGTTTGATTTTCCTTTTTTTTTTTTCCCCCTTTTTTCCTAGTCGTTGCCGATTCGTGCGAGCCTGATGTGACTACTAGTTTTTGAATCGTCATGCCGTATAATTTGATCTTGTTTTTAACATGCTTGAGGCATTTTAATTTTGCAATTGTATGGTAAATACTCATTGCAGTTTAAGCCGGAGGAGATTGCAGCGGTTATGAAAGATTTTGATGAGCCTGGATCTCTTGCCCCAACTGGTTTACACCTTGCTGGAACCAAATACATGGTTATCCAGGGCGAGCCTGGAGCTGTTGTTCGTGGCAAAAAGGTTCATTTTCTGATCACTTTTTTTAACGTCCATAGTTTTCTTTTGTTCTTAGATCTTATGAGAGATTGTTGTACTTTATAGGCTTACTCAACTTCCCTGATTTTTCTTAATTTATTCCTTAATTTCTTAAATCCCCAGCTTTACTATTAACATCCTTACCTATAATACTATTGTTTATCCAACATAAACTTTATTTAGTTTGTTAACTTTTCAAAAAAAATCTATAAGCAAATGGATAAATGTAGAAAATTGTATCATTTTATTAACATATGAACACATGAATAGAATTGAATGGATGTCTGGGACATTTCCACTTGATTATAGTTTTGATCTACTGTAAGAAATTTGATTTAATGGATCAAACTAGGTTGATTGACAGGGGATTTATAGTGTAAATGGCATATTGATGTGCATTATTACATTATATAGCTTCTCTTTGTAAATTTTAACAGTTAGAGAACCTGATTGAGAAATTTTAACGATTATAATTTGGTTTTTAGTTTTGTGCACTTGAAATTCTATTTTTAAACTGATAGAGAAGACTAAAATGATACAAAATCAGGTTCTAATTCTAGACTTAGCCTGTTTTCCATTGCATTGTTAGTGAATTTTGATCATTGAATAGGGCGCTGGTGGAATCACTGTGAAGAAAACAGAGAAAGCTGTGATTATTGGTATATACGATGAACCTGTGACTCCTGGACAATGCAATATGGTGGTGGAAAGGTTGGGAGATTACCTGATCGAACAGGGTCTGTAGGCCTTGCTTGACCTCCCTCCCTCCCTCCTCCTCACCTCCATTTTTGCTGCTTTCAAAATATTGCTTGTTCTTCTTCCATTCTCTGCCCATTTCATTTGAATCACCGCCCTATGCGTTATTTCTATGTATGAGTTCTTCCCATTTCTTTAGTGTTTGAATTTTTTCTTCAAATGCTTATTATGAACTACTGAATGATATAAATTTGCGATACTATTGCTCCTTCCATCCATCATTTAGTTATGTAAAATTCTCAATTATAATGTGACCATCTGTTTGAATAGTTTCTGATTCTTGATTGTTATTGAGTGGTAAATTATGGGTTTAGGGTTTTATTTTGAATTCAAA

mRNA sequence

ATATCTCAAAGCCATAACCAAATCGACATGCGAGACTGAAGAGCAACTAGAAGAAGAACGAAGAAGAAGAGAAGAAAACTTTGCCGCTAATCGAAATTCGAAGTTCCGTTGTTGAAGCTTGAAAATGTCGTGGCAAACTTACGTCGATGATCACCTCATGTGTGAGATTGAAGGCAACCATCTCACCTCCGCCGCCATCATTGGACATGACGCCAGTGTTTGGGCGCAGAGCGCCTCTTTCCCTCAGTTTAAGCCGGAGGAGATTGCAGCGGTTATGAAAGATTTTGATGAGCCTGGATCTCTTGCCCCAACTGGTTTACACCTTGCTGGAACCAAATACATGGTTATCCAGGGCGAGCCTGGAGCTGTTGTTCGTGGCAAAAAGGGCGCTGGTGGAATCACTGTGAAGAAAACAGAGAAAGCTGTGATTATTGGTATATACGATGAACCTGTGACTCCTGGACAATGCAATATGGTGGTGGAAAGGTTGGGAGATTACCTGATCGAACAGGGTCTGTAGGCCTTGCTTGACCTCCCTCCCTCCCTCCTCCTCACCTCCATTTTTGCTGCTTTCAAAATATTGCTTGTTCTTCTTCCATTCTCTGCCCATTTCATTTGAATCACCGCCCTATGCGTTATTTCTATGTATGAGTTCTTCCCATTTCTTTAGTGTTTGAATTTTTTCTTCAAATGCTTATTATGAACTACTGAATGATATAAATTTGCGATACTATTGCTCCTTCCATCCATCATTTAGTTATGTAAAATTCTCAATTATAATGTGACCATCTGTTTGAATAGTTTCTGATTCTTGATTGTTATTGAGTGGTAAATTATGGGTTTAGGGTTTTATTTTGAATTCAAA

Coding sequence (CDS)

ATGTCGTGGCAAACTTACGTCGATGATCACCTCATGTGTGAGATTGAAGGCAACCATCTCACCTCCGCCGCCATCATTGGACATGACGCCAGTGTTTGGGCGCAGAGCGCCTCTTTCCCTCAGTTTAAGCCGGAGGAGATTGCAGCGGTTATGAAAGATTTTGATGAGCCTGGATCTCTTGCCCCAACTGGTTTACACCTTGCTGGAACCAAATACATGGTTATCCAGGGCGAGCCTGGAGCTGTTGTTCGTGGCAAAAAGGGCGCTGGTGGAATCACTGTGAAGAAAACAGAGAAAGCTGTGATTATTGGTATATACGATGAACCTGTGACTCCTGGACAATGCAATATGGTGGTGGAAAGGTTGGGAGATTACCTGATCGAACAGGGTCTGTAG

Protein sequence

MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSLAPTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVERLGDYLIEQGL

Homology

[Close]

BLAST of Cp4.1LG17g05180 vs. ExPASy Swiss-Prot
Match: Q9M7N0 (Profilin-3 OS=Hevea brasiliensis OX=3981 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-65
Identity = 112/131 (85.50%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVD+HLMC+I+G+HLT+AAIIGHD SVWAQS+SFPQFKPEE+AA+MKDFDEPGSL
Sbjct: 1   MSWQTYVDEHLMCDIDGHHLTAAAIIGHDGSVWAQSSSFPQFKPEEVAAIMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAV+RGKKG+GGITVKKT +A+IIGIYDEP+TPGQCNM+VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYL+EQG+
Sbjct: 121 RLGDYLLEQGM 131

[Close]

BLAST of Cp4.1LG17g05180 vs. ExPASy Swiss-Prot
Match: A4GFC2 (Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.6e-65
Identity = 112/131 (85.50%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMC+IEG HLT+AA+IGHD SVWAQSA+FPQFKPEE+AA++KDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGQHLTAAAVIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAV+RGKKGAGGITVKKT +A+I GIYDEP+TPGQCN++VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNIIVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYL+EQGL
Sbjct: 121 RLGDYLLEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. ExPASy Swiss-Prot
Match: Q941H7 (Profilin OS=Litchi chinensis OX=151069 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 4.4e-65
Identity = 114/131 (87.02%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMCE +G HLT+AAIIGHD SVWAQSA+FPQFKP EIAA+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCETDGQHLTAAAIIGHDGSVWAQSANFPQFKPAEIAAIMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAV+RGKKG GGITVKKT +A+IIGIYDEP+TPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGPGGITVKKTTQALIIGIYDEPMTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYL++QGL
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. ExPASy Swiss-Prot
Match: A4GFC4 (Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.2e-64
Identity = 111/130 (85.38%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQ YVDDHLMC+IEG HLT+AAIIGHD SVWAQSA+FPQFKPEE+AA++KDFDEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGQHLTAAAIIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAV+RGKKGAGGITVKKT +A+I GIYDEP+TPGQCN++VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNIIVE 120

Query: 121 RLGDYLIEQG 131
           RLGDYL+EQG
Sbjct: 121 RLGDYLLEQG 130

[Close]

BLAST of Cp4.1LG17g05180 vs. ExPASy Swiss-Prot
Match: A4GFB9 (Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.8e-64
Identity = 111/131 (84.73%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSW TYVDDHLMC+IEG HLT+AAIIGHD SVWAQSA+FPQFKPEE+AA++KDFDEPGSL
Sbjct: 1   MSWPTYVDDHLMCDIEGQHLTAAAIIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVI+GEPGAV+RGKKGAGGITVKKT +A+I GIYDEP+TPGQCN++VE
Sbjct: 61  APTGLHLGGTKYMVIRGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNIIVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYL+EQGL
Sbjct: 121 RLGDYLLEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. NCBI nr
Match: XP_022964432.1 (profilin-3-like [Cucurbita moschata] >XP_023514928.1 profilin-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268 bits (686), Expect = 9.96e-91
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 131
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. NCBI nr
Match: KAG6593495.1 (hypothetical protein SDJN03_12971, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025842.1 hypothetical protein SDJN02_12340 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267 bits (683), Expect = 2.86e-90
Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMC+IEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 131
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. NCBI nr
Match: XP_023000408.1 (profilin-3-like [Cucurbita maxima])

HSP 1 Score: 265 bits (678), Expect = 1.65e-89
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMC+IEGNHL+SAAIIGHDASVWAQSASFPQFKPEEIAA+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLSSAAIIGHDASVWAQSASFPQFKPEEIAAIMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 131
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. NCBI nr
Match: XP_022953195.1 (profilin-3 [Cucurbita moschata] >XP_022992440.1 profilin-3 [Cucurbita maxima] >XP_023548906.1 profilin-3 [Cucurbita pepo subsp. pepo] >KAG6575500.1 hypothetical protein SDJN03_26139, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014040.1 hypothetical protein SDJN02_24211, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 262 bits (669), Expect = 3.91e-88
Identity = 124/131 (94.66%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQSASFPQFKPEEI+A+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAVVRGKKGAGG+TVKKTEKA+I+GIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 131
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. NCBI nr
Match: XP_038899187.1 (profilin-3 [Benincasa hispida])

HSP 1 Score: 258 bits (659), Expect = 1.31e-86
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMC+IEGNHLTSAAIIGHDASVWAQS+SFPQFK  EI+A+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGHDASVWAQSSSFPQFKANEISAIMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 131
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. ExPASy TrEMBL
Match: A0A6J1HHT1 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111464458 PE=3 SV=1)

HSP 1 Score: 268 bits (686), Expect = 4.82e-91
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 131
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. ExPASy TrEMBL
Match: A0A6J1KMJ4 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111494668 PE=3 SV=1)

HSP 1 Score: 265 bits (678), Expect = 8.01e-90
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMC+IEGNHL+SAAIIGHDASVWAQSASFPQFKPEEIAA+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLSSAAIIGHDASVWAQSASFPQFKPEEIAAIMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 131
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. ExPASy TrEMBL
Match: A0A6J1JVP5 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111488743 PE=3 SV=1)

HSP 1 Score: 262 bits (669), Expect = 1.89e-88
Identity = 124/131 (94.66%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQSASFPQFKPEEI+A+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAVVRGKKGAGG+TVKKTEKA+I+GIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 131
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. ExPASy TrEMBL
Match: A0A6J1GNZ3 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111455809 PE=3 SV=1)

HSP 1 Score: 262 bits (669), Expect = 1.89e-88
Identity = 124/131 (94.66%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQSASFPQFKPEEI+A+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAVVRGKKGAGG+TVKKTEKA+I+GIYDEPVTPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQGL 131
           RLGDYLIEQGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. ExPASy TrEMBL
Match: A0A6M2F1W8 (Profilin OS=Populus davidiana OX=266767 PE=3 SV=1)

HSP 1 Score: 250 bits (639), Expect = 7.12e-84
Identity = 114/131 (87.02%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLT+AAIIGHD SVWAQSA+FPQFKPEEI+A+MKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTAAAIIGHDGSVWAQSATFPQFKPEEISAMMKDFDEPGSL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPGAV+RGKKG+GG+TVKKT +A++IG+YDEP+TPGQCNM+VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGSGGVTVKKTSQALVIGLYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQGL 131
           RLGDYLI+QGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 226.9 bits (577), Expect = 9.6e-60
Identity = 103/134 (76.87%), Postives = 121/134 (90.30%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEP 60
           MSWQ YVD+HLMC++   +G+HLT+AAIIGHD SVWAQSA+FPQFKP+EI  +MKDFDEP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GSLAPTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNM 120
           G LAPTG+ LAG KYMVIQGEP AV+RGKKGAGGIT+KKT ++++ G+Y+EPVTPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 VVERLGDYLIEQGL 132
           VVERLGDYLIEQGL
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of Cp4.1LG17g05180 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 225.7 bits (574), Expect = 2.1e-59
Identity = 102/134 (76.12%), Postives = 121/134 (90.30%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEP 60
           MSWQTYVD+HLMC++   +G+HLT+AAI+GHD SVWAQSA+FPQFK +E + +MKDFDEP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GSLAPTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNM 120
           G LAPTGL +AG KYMVIQGEPGAV+RGKKGAGGIT+KKT ++ + GIY+EPVTPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 VVERLGDYLIEQGL 132
           VVERLGDYL+EQGL
Sbjct: 121 VVERLGDYLLEQGL 134

[Close]

BLAST of Cp4.1LG17g05180 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 215.3 bits (547), Expect = 2.9e-56
Identity = 97/131 (74.05%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQ+YVDDHLMCE+EGNHLT AAI G D SVWAQS++FPQ KP EIA + KDF+E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGL L G KYMV+QGE GAV+RGKKG GG+T+KKT +A++ GIYDEP+T GQCN+VVE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIE GL
Sbjct: 121 RLGDYLIESGL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 214.5 bits (545), Expect = 4.9e-56
Identity = 96/131 (73.28%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQ+YVDDHLMC++EGNHLT+AAI+G D SVWAQSA FPQ KP+EI  + KDF+EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGL L G KYMVIQGE GAV+RGKKG GG+T+KKT +A++ G YDEP+T GQCN+VVE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLIEQGL 132
           RLGDYLIE  L
Sbjct: 121 RLGDYLIESEL 131

[Close]

BLAST of Cp4.1LG17g05180 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 212.6 bits (540), Expect = 1.9e-55
Identity = 96/131 (73.28%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60
           MSWQTYVDDHLMC++ GN LT+AAI+G D SVWAQS +FPQ KPEEI  +  DF  PG+L
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120
           APTGL L G KYMVIQGEP AV+RGKKGAGG+T+KKT  A++ GIYDEP+TPGQCNMVVE
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157

Query: 121 RLGDYLIEQGL 132
            LG+YLIE GL
Sbjct: 158 NLGEYLIESGL 168

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g05180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7N0	1.5e-65	85.50	Profilin-3 OS=Hevea brasiliensis OX=3981 PE=1 SV=1	[more]
A4GFC2	2.6e-65	85.50	Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
Q941H7	4.4e-65	87.02	Profilin OS=Litchi chinensis OX=151069 PE=1 SV=1	[more]
A4GFC4	2.2e-64	85.38	Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
A4GFB9	2.8e-64	84.73	Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1	[more]

BLAST of Cp4.1LG17g05180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964432.1	9.96e-91	100.00	profilin-3-like [Cucurbita moschata] >XP_023514928.1 profilin-3-like [Cucurbita ...	[more]
KAG6593495.1	2.86e-90	99.24	hypothetical protein SDJN03_12971, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023000408.1	1.65e-89	97.71	profilin-3-like [Cucurbita maxima]	[more]
XP_022953195.1	3.91e-88	94.66	profilin-3 [Cucurbita moschata] >XP_022992440.1 profilin-3 [Cucurbita maxima] >X...	[more]
XP_038899187.1	1.31e-86	94.66	profilin-3 [Benincasa hispida]	[more]

BLAST of Cp4.1LG17g05180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHT1	4.82e-91	100.00	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111464458 PE=3 SV=1	[more]
A0A6J1KMJ4	8.01e-90	97.71	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111494668 PE=3 SV=1	[more]
A0A6J1JVP5	1.89e-88	94.66	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111488743 PE=3 SV=1	[more]
A0A6J1GNZ3	1.89e-88	94.66	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111455809 PE=3 SV=1	[more]
A0A6M2F1W8	7.12e-84	87.02	Profilin OS=Populus davidiana OX=266767 PE=3 SV=1	[more]

BLAST of Cp4.1LG17g05180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19770.1	9.6e-60	76.87	profilin 5	[more]
AT4G29340.1	2.1e-59	76.12	profilin 4	[more]
AT4G29350.1	2.9e-56	74.05	profilin 2	[more]
AT2G19760.1	4.9e-56	73.28	profilin 1	[more]
AT5G56600.1	1.9e-55	73.28	profilin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 104..117 score: 90.0 coord: 117..130 score: 86.88 coord: 27..40 score: 76.88 coord: 1..14 score: 87.66 coord: 52..66 score: 82.79 coord: 84..99 score: 75.0 coord: 71..80 score: 96.73
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 40..60 score: 56.31 coord: 64..78 score: 70.83 coord: 3..12 score: 76.25 coord: 100..113 score: 62.5 coord: 21..30 score: 62.25 coord: 113..130 score: 76.11
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..131 e-value: 2.2E-62 score: 223.3
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..130 e-value: 1.5E-43 score: 148.0
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..131
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..130 e-value: 1.3068E-57 score: 172.895
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..131 e-value: 1.6E-56 score: 192.0
None	No IPR available	PANTHER	PTHR11604:SF51	PROFILIN-A	coord: 1..131
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g05180.1	Cp4.1LG17g05180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding