Cp4.1LG17g05160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g05160
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG17: 4228046 .. 4230213 (+)
RNA-Seq Expression	Cp4.1LG17g05160
Synteny	Cp4.1LG17g05160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCGTCAAATACAGAAGACTGAGAAAAAGGGAACTCCCAGTGATCGGAGATGAGCGAAGGAACTCCTAAGCTCTACGCCGACAAACCCAAGAAAGGTACCATTCCCCGATTCTTCGTTTCTTCCTAGTTTAGCCTCGAAATGTTTACTCCAAGAACTGATCCGCTTCAATCATTCATTTCAATTATTGCGGTTTTGATTCTGATTGATGATCGATCGCCTTTTTCTTTTGTTTTTTGTTTTTGTTTTTCCATCTGTAAACAGCTTAGGTTGTGCAATTTCAAGATCAGCACAAAGTCAGAGACGCTTCTTTTTCACCGGCGCCACAAGTATCGACGAACATGGGATCTGCGTCTTCCCCACCGCTGCCTCCTCCTACGAAGGAACCATTTGCAAGGCGATATAAGTTCATATGGCCCATGCTTTTGACTGTAAACCTTGGTGTTGGAGGTAATTTTCTTCTCTTCTTCCATGGTATGTGTATCAGTTTCTGGTTGCTGTGTTGACGTGTTTGATCGAATCCGTTAAATACCTAATCGGGAGATCGAGTTTTGATATTCGGTTAAATACAAATTTTGATACAGTTCAGCCAGAGAAAATTCATCCCCTGCCCAACATCCTCCCAAAAATCTGGTCAATCTACATCATCCACTTTGATCTTTGGATTACTTGATATAATGTTTTCTATTTCTAAATGTTCATATTTCTCATTCATTCCATAGATATCTACTTGCAATCACTTTGTGCCAAAACTGAACAAACTCGTACATAAATATATCCAGAGCCATTCTGATAATTAAAGCATAAAATCAGGGACCTGTTTGATGTCAATCTCTTACTTGAACACATCAGGGGGTTGTGAAGGCTTAGGGGTTGGAAGGAAAAGGGGGCATTAAGCTTCAACCATCACATTTTTGTATAATTGTATCTTTTATCGTCTTGGTTTCTTTCGTTCCTCAAGACGGAACTTTCCTTATACATGGAGAGAGATTGAAAAGTTTGACGACATAACGTCGTTTGTGAGATCTCCATATCAGATGGAGAGGGGAACAAAACATTCCTTATAAAGGTGTGGAAACCTCTTCCTAGCATACGCATTTTAAAACCGTGATGTTGACAGCGATACATAACAGGCCAAAATAGACAATATCTACTAGTGTGGGTCTAGACGGTTACAAATGATATCAAAGCCAAACACCGGGCAGTGTGCCAGCAAGGACGCTGGCCTCCAAGGGAGTGGATTGTAAGATCCCATATCGGTTGGAGAGGGGAACGAAGCATTATTTATAAGGATGCGAAAACCTTTTCCTAGCTTATTCGTTTTAAAACCCTGAGGCTGACAGCGATACATAACGGGCCAAAATGGACAATATCTACTAGCGGCGGGTCTGGACTGTTACAAATGATATCAAAGTCAAACACTAGGCAGTGTGCCAGTAAGGACGCTGGCCCCCAAGGGGGTGGATTGCGAGATCCCATATCGGTTGGAGATGAGAGCGAAGCATTCTTTATAAGGGTGTGGAAACCTCTTCCTAGCGTACGCATTTTAAAACCGTGAGGCTGATTGCGATACGTAACGAGCCAAAACGGACAATATGTACTAGTGGTGGGTTTGGGCTCTTACAGTGCGTTTGGATATAAATTAGTGTCTAAAGTTGAGTATATCGTATGCACGTATTAATCCGTAATAGAACGATTTATTCTCGTTTCCCACCAGGGATGGGATAAACTCCCCCACACTTTCATACTGCTCCACAGCTCCTTTTCAAGGAATTATAGGATAGCAGCAATATTCTAATAAGTTTTTTCACCTTTTGCTCTTGCATGAACTAAGATAAGTCTTTAAATTGTGTAGCTTATCTGTTTATGAGGACAAAGAAGCAAGATGAACATGATGTAGCTGAAGAAGAGGCTGCCACGGATTCAGCTAAAACTGCCAGGATCGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAGCCATTGTGGAGCCAGTGAAGGTAAGGGAACCAATTCCGGTGGATCAGCAGCGTGAGCTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATCAACCCTAAAGATCGTGATGAGAAGAAGCGTATGGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCAGAGCAAAATCTGTTCCAAATCTTTAA

mRNA sequence

ATGAGCCATCAGCACAAAGTCAGAGACGCTTCTTTTTCACCGGCGCCACAAGTATCGACGAACATGGGATCTGCGTCTTCCCCACCGCTGCCTCCTCCTACGAAGGAACCATTTGCAAGGCGATATAAGTTCATATGGCCCATGCTTTTGACTGTAAACCTTGGTGTTGGAGATGAACATGATGTAGCTGAAGAAGAGGCTGCCACGGATTCAGCTAAAACTGCCAGGATCGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAGCCATTGTGGAGCCAGTGAAGGTAAGGGAACCAATTCCGGTGGATCAGCAGCGTGAGCTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATCAACCCTAAAGATCGTGATGAGAAGAAGCGTATGGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCAGAGCAAAATCTGTTCCAAATCTTTAA

Coding sequence (CDS)

ATGAGCCATCAGCACAAAGTCAGAGACGCTTCTTTTTCACCGGCGCCACAAGTATCGACGAACATGGGATCTGCGTCTTCCCCACCGCTGCCTCCTCCTACGAAGGAACCATTTGCAAGGCGATATAAGTTCATATGGCCCATGCTTTTGACTGTAAACCTTGGTGTTGGAGATGAACATGATGTAGCTGAAGAAGAGGCTGCCACGGATTCAGCTAAAACTGCCAGGATCGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAGCCATTGTGGAGCCAGTGAAGGTAAGGGAACCAATTCCGGTGGATCAGCAGCGTGAGCTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATCAACCCTAAAGATCGTGATGAGAAGAAGCGTATGGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCAGAGCAAAATCTGTTCCAAATCTTTAA

Protein sequence

MSHQHKVRDASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGDEHDVAEEEAATDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL

Homology

[Close]

BLAST of Cp4.1LG17g05160 vs. NCBI nr
Match: XP_022964000.1 (uncharacterized protein LOC111464152 isoform X1 [Cucurbita moschata])

HSP 1 Score: 270 bits (690), Expect = 6.38e-90
Identity = 145/157 (92.36%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 4   QHKVRDASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG------ 63
           QHKVR ASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG      
Sbjct: 48  QHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMR 107

Query: 64  ----DEHDVAEEEAATDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWI 123
               DEHDVAEEEAA+DSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWI
Sbjct: 108 TKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWI 167

Query: 124 LEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 150
           LEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
Sbjct: 168 LEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 204

[Close]

BLAST of Cp4.1LG17g05160 vs. NCBI nr
Match: KAG7025859.1 (hypothetical protein SDJN02_12357, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268 bits (686), Expect = 2.59e-89
Identity = 144/156 (92.31%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 5   HKVRDASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG------- 64
           HKVRDASFSPAPQV TNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG       
Sbjct: 49  HKVRDASFSPAPQVLTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRT 108

Query: 65  ---DEHDVAEEEAATDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWIL 124
              DEHDVAEEEAA+DSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWIL
Sbjct: 109 KKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWIL 168

Query: 125 EEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 150
           EEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
Sbjct: 169 EEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 204

[Close]

BLAST of Cp4.1LG17g05160 vs. NCBI nr
Match: XP_023515174.1 (uncharacterized protein LOC111779287 [Cucurbita pepo subsp. pepo] >XP_023515175.1 uncharacterized protein LOC111779287 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239 bits (609), Expect = 1.56e-78
Identity = 129/139 (92.81%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 22  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG----------DEHDVAEEEAATDS 81
           MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG          DEHDVAEEEAATDS
Sbjct: 1   MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAATDS 60

Query: 82  AKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRM 141
           AKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRM
Sbjct: 61  AKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRM 120

Query: 142 DEEKAILKEFIRAKSVPNL 150
           DEEKAILKEFIRAKSVPNL
Sbjct: 121 DEEKAILKEFIRAKSVPNL 139

[Close]

BLAST of Cp4.1LG17g05160 vs. NCBI nr
Match: XP_022964001.1 (uncharacterized protein LOC111464152 isoform X2 [Cucurbita moschata])

HSP 1 Score: 237 bits (605), Expect = 6.35e-78
Identity = 128/139 (92.09%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 22  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG----------DEHDVAEEEAATDS 81
           MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG          DEHDVAEEEAA+DS
Sbjct: 1   MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDS 60

Query: 82  AKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRM 141
           AKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRM
Sbjct: 61  AKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRM 120

Query: 142 DEEKAILKEFIRAKSVPNL 150
           DEEKAILKEFIRAKSVPNL
Sbjct: 121 DEEKAILKEFIRAKSVPNL 139

[Close]

BLAST of Cp4.1LG17g05160 vs. NCBI nr
Match: KAG6575480.1 (hypothetical protein SDJN03_26119, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014023.1 hypothetical protein SDJN02_24194 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 210 bits (535), Expect = 1.21e-66
Identity = 118/158 (74.68%), Postives = 126/158 (79.75%), Query Frame = 0


Query: 4   QHKVRDASFS--PAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG---- 63
           QHKV  AS S  PAP  S+N  S SS  LP P KE FARRYKF+WPMLLTVNL VG    
Sbjct: 25  QHKVMSASSSSSPAPPASSNTASTSSSSLPQPPKESFARRYKFLWPMLLTVNLAVGAYLL 84

Query: 64  -----DEHDVAEEEAATDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKW 123
                 +  V EEEAA DSAKTA+IAAPVVEES A+PAIVEPVKVREPIPVDQQRELFKW
Sbjct: 85  MRTKKQDEQVTEEEAAPDSAKTAKIAAPVVEESFAKPAIVEPVKVREPIPVDQQRELFKW 144

Query: 124 ILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 150
           ILEEKRKI PKDR+EKKR+DEEKAILKEFIRAKS+PNL
Sbjct: 145 ILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNL 182

[Close]

BLAST of Cp4.1LG17g05160 vs. ExPASy TrEMBL
Match: A0A6J1HJK4 (uncharacterized protein LOC111464152 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464152 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 3.09e-90
Identity = 145/157 (92.36%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 4   QHKVRDASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG------ 63
           QHKVR ASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG      
Sbjct: 48  QHKVRGASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMR 107

Query: 64  ----DEHDVAEEEAATDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWI 123
               DEHDVAEEEAA+DSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWI
Sbjct: 108 TKKQDEHDVAEEEAASDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWI 167

Query: 124 LEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 150
           LEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL
Sbjct: 168 LEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 204

[Close]

BLAST of Cp4.1LG17g05160 vs. ExPASy TrEMBL
Match: A0A6J1HHM5 (uncharacterized protein LOC111464152 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464152 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 3.08e-78
Identity = 128/139 (92.09%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 22  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG----------DEHDVAEEEAATDS 81
           MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG          DEHDVAEEEAA+DS
Sbjct: 1   MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVGAYLFMRTKKQDEHDVAEEEAASDS 60

Query: 82  AKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRM 141
           AKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRM
Sbjct: 61  AKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKINPKDRDEKKRM 120

Query: 142 DEEKAILKEFIRAKSVPNL 150
           DEEKAILKEFIRAKSVPNL
Sbjct: 121 DEEKAILKEFIRAKSVPNL 139

[Close]

BLAST of Cp4.1LG17g05160 vs. ExPASy TrEMBL
Match: E5GCA6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 207 bits (527), Expect = 8.45e-66
Identity = 117/157 (74.52%), Postives = 129/157 (82.17%), Query Frame = 0


Query: 4   QHKVRDASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG------ 63
           QHK  DAS S +  +++   S+SSPP P P KE FARRYKF+WPMLLTVNL VG      
Sbjct: 25  QHKAGDASSSASSSMAS--ASSSSPPPPQPPKESFARRYKFLWPMLLTVNLAVGAYVFMR 84

Query: 64  ----DEHDVAEEEAATDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWI 123
               DEH VAEEEAA DSAKT +IAAPVVEESLA+PAIVEPVKVREPIPVDQQRELFKWI
Sbjct: 85  TKKQDEH-VAEEEAAPDSAKTTKIAAPVVEESLAKPAIVEPVKVREPIPVDQQRELFKWI 144

Query: 124 LEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 150
           LEEKRKI PKDR+EKKR+DEEKAILKEFIRAKS+PN+
Sbjct: 145 LEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNI 178

[Close]

BLAST of Cp4.1LG17g05160 vs. ExPASy TrEMBL
Match: A0A1S3CGT4 (uncharacterized protein LOC103500733 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500733 PE=4 SV=1)

HSP 1 Score: 207 bits (527), Expect = 8.45e-66
Identity = 117/157 (74.52%), Postives = 129/157 (82.17%), Query Frame = 0


Query: 4   QHKVRDASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG------ 63
           QHK  DAS S +  +++   S+SSPP P P KE FARRYKF+WPMLLTVNL VG      
Sbjct: 25  QHKAGDASSSASSSMAS--ASSSSPPPPQPPKESFARRYKFLWPMLLTVNLAVGAYVFMR 84

Query: 64  ----DEHDVAEEEAATDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWI 123
               DEH VAEEEAA DSAKT +IAAPVVEESLA+PAIVEPVKVREPIPVDQQRELFKWI
Sbjct: 85  TKKQDEH-VAEEEAAPDSAKTTKIAAPVVEESLAKPAIVEPVKVREPIPVDQQRELFKWI 144

Query: 124 LEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 150
           LEEKRKI PKDR+EKKR+DEEKAILKEFIRAKS+PN+
Sbjct: 145 LEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNI 178

[Close]

BLAST of Cp4.1LG17g05160 vs. ExPASy TrEMBL
Match: A0A1S3CIB4 (uncharacterized protein LOC103500733 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500733 PE=4 SV=1)

HSP 1 Score: 207 bits (527), Expect = 8.73e-66
Identity = 117/157 (74.52%), Postives = 129/157 (82.17%), Query Frame = 0


Query: 4   QHKVRDASFSPAPQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG------ 63
           QHK  DAS S +  +++   S+SSPP P P KE FARRYKF+WPMLLTVNL VG      
Sbjct: 26  QHKAGDASSSASSSMAS--ASSSSPPPPQPPKESFARRYKFLWPMLLTVNLAVGAYVFMR 85

Query: 64  ----DEHDVAEEEAATDSAKTARIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWI 123
               DEH VAEEEAA DSAKT +IAAPVVEESLA+PAIVEPVKVREPIPVDQQRELFKWI
Sbjct: 86  TKKQDEH-VAEEEAAPDSAKTTKIAAPVVEESLAKPAIVEPVKVREPIPVDQQRELFKWI 145

Query: 124 LEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 150
           LEEKRKI PKDR+EKKR+DEEKAILKEFIRAKS+PN+
Sbjct: 146 LEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNI 179

[Close]

BLAST of Cp4.1LG17g05160 vs. TAIR 10
Match: AT1G55160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 138.7 bits (348), Expect = 4.0e-33
Identity = 84/147 (57.14%), Postives = 102/147 (69.39%), Query Frame = 0


Query: 15  APQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG----------DEHDVAE 74
           A   S  MG  S PP PPP KE FARRYK++WP+LLTVNL VG          D   V E
Sbjct: 45  AAAASYTMGGGSVPP-PPPPKESFARRYKYVWPLLLTVNLAVGGYLFFRTKKKDLDPVVE 104

Query: 75  EEAATDSAKTARIAAPV-VEESLARPAIVEPV--KVREPIPVDQQRELFKWILEEKRKIN 134
           E A    AK++ +AAPV VE++L+   + EPV  K REPIP  QQRELFKW+LEEKRK+N
Sbjct: 105 ETA----AKSSSVAAPVTVEKTLSSTVVAEPVVIKAREPIPEKQQRELFKWMLEEKRKVN 164

Query: 135 PKDRDEKKRMDEEKAILKEFIRAKSVP 149
           PK+ +EKKR DEEKAILK+FI +K++P
Sbjct: 165 PKNAEEKKRNDEEKAILKQFIGSKTIP 186

[Close]

BLAST of Cp4.1LG17g05160 vs. TAIR 10
Match: AT1G55160.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 137.9 bits (346), Expect = 6.7e-33
Identity = 82/140 (58.57%), Postives = 100/140 (71.43%), Query Frame = 0


Query: 22  MGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG----------DEHDVAEEEAATDS 81
           MG  S PP PPP KE FARRYK++WP+LLTVNL VG          D   V EE A    
Sbjct: 1   MGGGSVPP-PPPPKESFARRYKYVWPLLLTVNLAVGGYLFFRTKKKDLDPVVEETA---- 60

Query: 82  AKTARIAAPV-VEESLARPAIVEPV--KVREPIPVDQQRELFKWILEEKRKINPKDRDEK 141
           AK++ +AAPV VE++L+   + EPV  K REPIP  QQRELFKW+LEEKRK+NPK+ +EK
Sbjct: 61  AKSSSVAAPVTVEKTLSSTVVAEPVVIKAREPIPEKQQRELFKWMLEEKRKVNPKNAEEK 120

Query: 142 KRMDEEKAILKEFIRAKSVP 149
           KR DEEKAILK+FI +K++P
Sbjct: 121 KRNDEEKAILKQFIGSKTIP 135

[Close]

BLAST of Cp4.1LG17g05160 vs. TAIR 10
Match: AT1G55160.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 3.1e-30
Identity = 85/171 (49.71%), Postives = 104/171 (60.82%), Query Frame = 0


Query: 15  APQVSTNMGSASSPPLPPPTKEPFARRYKFIWPMLLTVNLGVG------DEH-------- 74
           A   S  MG  S PP PPP KE FARRYK++WP+LLTVNL VG      DE+        
Sbjct: 45  AAAASYTMGGGSVPP-PPPPKESFARRYKYVWPLLLTVNLAVGGFCSSLDENRIVFSFIF 104

Query: 75  --------------------DVAEEEAATDSAKTARIAAPV-VEESLARPAIVEPV--KV 134
                               D   EE A   AK++ +AAPV VE++L+   + EPV  K 
Sbjct: 105 MMLRVIYDSYLFFRTKKKDLDPVVEETA---AKSSSVAAPVTVEKTLSSTVVAEPVVIKA 164

Query: 135 REPIPVDQQRELFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVP 149
           REPIP  QQRELFKW+LEEKRK+NPK+ +EKKR DEEKAILK+FI +K++P
Sbjct: 165 REPIPEKQQRELFKWMLEEKRKVNPKNAEEKKRNDEEKAILKQFIGSKTIP 211

[Close]

BLAST of Cp4.1LG17g05160 vs. TAIR 10
Match: AT2G19530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55160.2); Has 461 Blast hits to 346 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 89; Fungi - 28; Plants - 57; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). )

HSP 1 Score: 84.7 bits (208), Expect = 6.8e-17
Identity = 54/102 (52.94%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 69  TDSAKTARIAAPVVEE-------------------SLARPAIVEPVKV-REPIPVDQQRE 128
           TD AK A  A P  EE                   S+ +    E VKV R+PIP D+Q+E
Sbjct: 82  TDKAKEAETAIPEKEETKLIPELDPLFEFTDATDQSMFQTVATEHVKVARKPIPEDEQKE 141

Query: 129 LFKWILEEKRKINPKDRDEKKRMDEEKAILKEFIRAKSVPNL 151
           LFKWILEEKRKI PKDR EKK++DEEKAILK+FIRA+ +P L
Sbjct: 142 LFKWILEEKRKIEPKDRKEKKQIDEEKAILKQFIRAERIPKL 183

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g05160 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g05160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964000.1	6.38e-90	92.36	uncharacterized protein LOC111464152 isoform X1 [Cucurbita moschata]	[more]
KAG7025859.1	2.59e-89	92.31	hypothetical protein SDJN02_12357, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023515174.1	1.56e-78	92.81	uncharacterized protein LOC111779287 [Cucurbita pepo subsp. pepo] >XP_023515175....	[more]
XP_022964001.1	6.35e-78	92.09	uncharacterized protein LOC111464152 isoform X2 [Cucurbita moschata]	[more]
KAG6575480.1	1.21e-66	74.68	hypothetical protein SDJN03_26119, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG17g05160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJK4	3.09e-90	92.36	uncharacterized protein LOC111464152 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HHM5	3.08e-78	92.09	uncharacterized protein LOC111464152 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
E5GCA6	8.45e-66	74.52	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3CGT4	8.45e-66	74.52	uncharacterized protein LOC103500733 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CIB4	8.73e-66	74.52	uncharacterized protein LOC103500733 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cp4.1LG17g05160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55160.1	4.0e-33	57.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55160.2	6.7e-33	58.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55160.3	3.1e-30	49.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G19530.1	6.8e-17	52.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR34364	WAS/WASL-INTERACTING FAMILY PROTEIN	coord: 19..150
None	No IPR available	PANTHER	PTHR34364:SF12	SUBFAMILY NOT NAMED	coord: 19..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g05160.1	Cp4.1LG17g05160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane