Cp4.1LG17g05030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g05030
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	PRA1 family protein
Location	Cp4.1LG17: 4255419 .. 4255994 (+)
RNA-Seq Expression	Cp4.1LG17g05030
Synteny	Cp4.1LG17g05030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCTACGGCACCATCCCTACCACCGCCACCTCTGGAACTTCCTCCGATCTCGAATTCGTCTCCCGCGCCAAACAGCGCCTCAAAGCCGGCCTCGCCACTCGCGTTCCATGGAGGCTCATGTTCGATTTCCACTCCTTCAACCTTCCATTCAACTTCCACGAGGCCTTCTCTCGCATCAAGAACAACCTCGCTTACTTCCGTATGAACTACGCCATCATTCTTCTCATAATCCTGCTCTTGAGCCTCTTGTGGCATCCGATCTCCCTCATCGTCCTCGCCGCCATGCTTGCCGTTTGGTTGTTCCTGTATTTCCTTCGCGATGAGCCTCTCTTCTTCTTTGGCCGTCTGATTGACGATCGAGTGGTTTTGGCTGTGCTGGCGGTGCTCACGCTCGCGTTCTTGTTTCTGACCAACGCGACGCTCAATATCCTGCTTTCGATTCTGATCGGCGCTGTGCTTGTGCTGATTCACTCCGCTGTGAGGAAGACGGATGATCTATTCTTGGACGAAGAAGCTACTGCAGTCTTCACCGTCGGTTCCAATGCTCCTGGTTCTTCAACTTCCTTCTAA

mRNA sequence

ATGGCCTCCTACGGCACCATCCCTACCACCGCCACCTCTGGAACTTCCTCCGATCTCGAATTCGTCTCCCGCGCCAAACAGCGCCTCAAAGCCGGCCTCGCCACTCGCGTTCCATGGAGGCTCATGTTCGATTTCCACTCCTTCAACCTTCCATTCAACTTCCACGAGGCCTTCTCTCGCATCAAGAACAACCTCGCTTACTTCCGTATGAACTACGCCATCATTCTTCTCATAATCCTGCTCTTGAGCCTCTTGTGGCATCCGATCTCCCTCATCGTCCTCGCCGCCATGCTTGCCGTTTGGTTGTTCCTGTATTTCCTTCGCGATGAGCCTCTCTTCTTCTTTGGCCGTCTGATTGACGATCGAGTGGTTTTGGCTGTGCTGGCGGTGCTCACGCTCGCGTTCTTGTTTCTGACCAACGCGACGCTCAATATCCTGCTTTCGATTCTGATCGGCGCTGTGCTTGTGCTGATTCACTCCGCTGTGAGGAAGACGGATGATCTATTCTTGGACGAAGAAGCTACTGCAGTCTTCACCGTCGGTTCCAATGCTCCTGGTTCTTCAACTTCCTTCTAA

Coding sequence (CDS)

ATGGCCTCCTACGGCACCATCCCTACCACCGCCACCTCTGGAACTTCCTCCGATCTCGAATTCGTCTCCCGCGCCAAACAGCGCCTCAAAGCCGGCCTCGCCACTCGCGTTCCATGGAGGCTCATGTTCGATTTCCACTCCTTCAACCTTCCATTCAACTTCCACGAGGCCTTCTCTCGCATCAAGAACAACCTCGCTTACTTCCGTATGAACTACGCCATCATTCTTCTCATAATCCTGCTCTTGAGCCTCTTGTGGCATCCGATCTCCCTCATCGTCCTCGCCGCCATGCTTGCCGTTTGGTTGTTCCTGTATTTCCTTCGCGATGAGCCTCTCTTCTTCTTTGGCCGTCTGATTGACGATCGAGTGGTTTTGGCTGTGCTGGCGGTGCTCACGCTCGCGTTCTTGTTTCTGACCAACGCGACGCTCAATATCCTGCTTTCGATTCTGATCGGCGCTGTGCTTGTGCTGATTCACTCCGCTGTGAGGAAGACGGATGATCTATTCTTGGACGAAGAAGCTACTGCAGTCTTCACCGTCGGTTCCAATGCTCCTGGTTCTTCAACTTCCTTCTAA

Protein sequence

MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSRIKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLIDDRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTVGSNAPGSSTSF

Homology

[Close]

BLAST of Cp4.1LG17g05030 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.3e-51
Identity = 111/181 (61.33%), Postives = 137/181 (75.69%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           M +YG IPT++ +    D+E +SRAK R+KAGLATR  WR+MFDFHS  LP    +AF+R
Sbjct: 1   MTNYGAIPTSSHASPLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IK NLAYFRMNYAI++LI++  SL+WHP SLIV   ++ VW+FLYFLRDEP+  F   ID
Sbjct: 61  IKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQID 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DR VL VL+VLT+  L LTNAT NI+ +++ GAVLVLIHS VRKT+DLFLDEEA    T 
Sbjct: 121 DRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAATTETS 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]

BLAST of Cp4.1LG17g05030 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.9e-49
Identity = 111/177 (62.71%), Postives = 135/177 (76.27%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           M +YG IPT++    + DLE++SRAK R+K+GLATR PW+ MFDF S  LP  F +A SR
Sbjct: 1   MTNYGAIPTSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IK NL YFR NYAI +L IL LSLL+HP SLIVL+ ++  W+FLYFLRDEPL  FG  ID
Sbjct: 61  IKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQID 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAV 178
           DR VL  L+VLT+  L LT+AT NIL S+L  AVLVLIH+AVR++D+LFLDEEA AV
Sbjct: 121 DRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAV 177

[Close]

BLAST of Cp4.1LG17g05030 vs. ExPASy Swiss-Prot
Match: Q9LIC7 (PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.8e-44
Identity = 103/188 (54.79%), Postives = 132/188 (70.21%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           MA+   I T++ +  + + E +SRAKQR+K GLATR  WR+MFD HS  LP    + FSR
Sbjct: 1   MANNDEITTSSHASPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IK NLAYFR NYAI++L ++  SL+WHP SLIV   ++ +W+FLYFLRD PL  F   ID
Sbjct: 61  IKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQID 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DR VL  L+V+T+  L LTNAT NI+ +++ GAVLVLIH+ +RKTDDLFLDEEA    T 
Sbjct: 121 DRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAATTETS 180

Query: 181 GSNAPGSS 189
           G  +  SS
Sbjct: 181 GLTSHPSS 188

[Close]

BLAST of Cp4.1LG17g05030 vs. ExPASy Swiss-Prot
Match: Q9FZ63 (PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.4e-35
Identity = 87/178 (48.88%), Postives = 124/178 (69.66%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRA-KQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFS 60
           M +YGT    +++  +  LE+++R   Q  ++GLATR PW+ M D  SFN P       +
Sbjct: 1   MTTYGT-NQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVIT 60

Query: 61  RIKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLI 120
           RI+ N  YF+ NY I++L  + LSL+W+P SL+VL A+L  WLFLYFLRDEPL  F R I
Sbjct: 61  RIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREI 120

Query: 121 DDRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAV 178
           D R+VL +++V+TL+ LFLT+A LNI ++I+ GA+ VL H+AVRKT+DLF  +E T++
Sbjct: 121 DHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETSL 177

[Close]

BLAST of Cp4.1LG17g05030 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.2e-24
Identity = 73/193 (37.82%), Postives = 120/193 (62.18%), Query Frame = 0


Query: 2   ASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSRI 61
           A  G +  ++TS T+      +RAKQ  ++ + T  PWR + D  + +LP  + EA + +
Sbjct: 13  AGGGGVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHL 72

Query: 62  KNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRD--EPLFFFGRLI 121
           K+N++YFR NYA+ +L I+ L L++HP+S+I    +   W+ LYF RD  + +   G+ +
Sbjct: 73  KHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEV 132

Query: 122 DDRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEAT---A 181
           DD++VL +L+++T+  L  T+   N+L+S++IG ++V  H A R TDDLFLDEE+     
Sbjct: 133 DDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGG 192

Query: 182 VFTVGS-NAPGSS 189
           + + GS N P SS
Sbjct: 193 LVSAGSGNRPPSS 205

[Close]

BLAST of Cp4.1LG17g05030 vs. NCBI nr
Match: XP_022964339.1 (PRA1 family protein F3-like [Cucurbita moschata] >XP_023514624.1 PRA1 family protein F3-like [Cucurbita pepo subsp. pepo] >KAG6593513.1 PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025858.1 PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343 bits (881), Expect = 1.68e-118
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR
Sbjct: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID
Sbjct: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV
Sbjct: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180

Query: 181 GSNAPGSSTSF 191
           GSNAPGSSTSF
Sbjct: 181 GSNAPGSSTSF 191

[Close]

BLAST of Cp4.1LG17g05030 vs. NCBI nr
Match: XP_023000399.1 (PRA1 family protein F3-like [Cucurbita maxima])

HSP 1 Score: 337 bits (864), Expect = 6.57e-116
Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           MASYGTIPTTA SGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR
Sbjct: 1   MASYGTIPTTAPSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IKNNLAYFRMNYAII+LIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLI 
Sbjct: 61  IKNNLAYFRMNYAIIVLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLIA 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV
Sbjct: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180

Query: 181 GSNAPGSSTSF 191
           GSNAPGSSTSF
Sbjct: 181 GSNAPGSSTSF 191

[Close]

BLAST of Cp4.1LG17g05030 vs. NCBI nr
Match: KAG7014025.1 (PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286 bits (731), Expect = 1.34e-95
Identity = 157/190 (82.63%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           M SYGTIPT+A  GTSS+LEF SR KQRL+AG ATR PWRLMFDFHSF LPFNF + FSR
Sbjct: 1   MTSYGTIPTSAAPGTSSNLEFFSRGKQRLEAGFATRAPWRLMFDFHSFTLPFNFRDTFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           +K N+AYFRMNYAII+L IL LSLLWHPISLIV  AMLAVWLFLYFLRDEPL   GRLID
Sbjct: 61  VKTNIAYFRMNYAIIVLFILFLSLLWHPISLIVFTAMLAVWLFLYFLRDEPLILLGRLID 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DRVVL VL+V TL FLFLTNATLNILLSILIGAVL+LIH+AVRKTDDLFLDEEATAVFTV
Sbjct: 121 DRVVLVVLSVFTLVFLFLTNATLNILLSILIGAVLLLIHAAVRKTDDLFLDEEATAVFTV 180

Query: 181 GSNAPGSSTS 190
           GS APGSS S
Sbjct: 181 GSRAPGSSIS 190

[Close]

BLAST of Cp4.1LG17g05030 vs. NCBI nr
Match: KAG6575482.1 (PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 286 bits (732), Expect = 3.03e-94
Identity = 157/190 (82.63%), Postives = 168/190 (88.42%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           M +YGTIPT+A  GTSS+LEF SR KQRL+AG ATR PWRLMFDFHSF LPFNF + FSR
Sbjct: 1   MTTYGTIPTSAAPGTSSNLEFFSRGKQRLEAGFATRAPWRLMFDFHSFTLPFNFRDTFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           +K N+AYFRMNYAII+L IL LSLLWHPISLIV  AMLAVWLFLYFLRDEPL   GRLID
Sbjct: 61  VKTNIAYFRMNYAIIVLFILFLSLLWHPISLIVFTAMLAVWLFLYFLRDEPLILLGRLID 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DRVVLAVL+V TL FLFLTNATLNILLSILIGAVL+LIH+AVRKTDDLFLDEEATAVFTV
Sbjct: 121 DRVVLAVLSVFTLVFLFLTNATLNILLSILIGAVLLLIHAAVRKTDDLFLDEEATAVFTV 180

Query: 181 GSNAPGSSTS 190
           GS APGSS S
Sbjct: 181 GSRAPGSSIS 190

[Close]

BLAST of Cp4.1LG17g05030 vs. NCBI nr
Match: XP_008462362.1 (PREDICTED: PRA1 family protein F3 [Cucumis melo])

HSP 1 Score: 281 bits (718), Expect = 1.28e-93
Identity = 151/190 (79.47%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           M SYGTIPT+   GTSSDL+FVSR KQRLKAGLATRVPWRLMFDFHSF LPFNFHE FSR
Sbjct: 1   MTSYGTIPTSTAPGTSSDLDFVSRGKQRLKAGLATRVPWRLMFDFHSFTLPFNFHETFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IK N+ YFRMNY II+L+IL  SL+WHPISLIV  AMLAVWLFLYFLRDEPL  FGRLI+
Sbjct: 61  IKTNIVYFRMNYVIIVLLILFFSLIWHPISLIVFTAMLAVWLFLYFLRDEPLILFGRLIN 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DR+V+AVL+V TL FLFLT ATLNILLS+LIGAVLVLIH+A+RKTDDLFLDE AT V+T 
Sbjct: 121 DRLVMAVLSVFTLVFLFLTKATLNILLSLLIGAVLVLIHAALRKTDDLFLDEGATTVYTF 180

Query: 181 GSNAPGSSTS 190
           GS+APG+S S
Sbjct: 181 GSDAPGTSVS 190

[Close]

BLAST of Cp4.1LG17g05030 vs. ExPASy TrEMBL
Match: A0A6J1HMV8 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111464378 PE=3 SV=1)

HSP 1 Score: 343 bits (881), Expect = 8.15e-119
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR
Sbjct: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID
Sbjct: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV
Sbjct: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180

Query: 181 GSNAPGSSTSF 191
           GSNAPGSSTSF
Sbjct: 181 GSNAPGSSTSF 191

[Close]

BLAST of Cp4.1LG17g05030 vs. ExPASy TrEMBL
Match: A0A6J1KJT5 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111494658 PE=3 SV=1)

HSP 1 Score: 337 bits (864), Expect = 3.18e-116
Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           MASYGTIPTTA SGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR
Sbjct: 1   MASYGTIPTTAPSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IKNNLAYFRMNYAII+LIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLI 
Sbjct: 61  IKNNLAYFRMNYAIIVLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLIA 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV
Sbjct: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180

Query: 181 GSNAPGSSTSF 191
           GSNAPGSSTSF
Sbjct: 181 GSNAPGSSTSF 191

[Close]

BLAST of Cp4.1LG17g05030 vs. ExPASy TrEMBL
Match: A0A1S3CGR4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103500735 PE=3 SV=1)

HSP 1 Score: 281 bits (718), Expect = 6.18e-94
Identity = 151/190 (79.47%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           M SYGTIPT+   GTSSDL+FVSR KQRLKAGLATRVPWRLMFDFHSF LPFNFHE FSR
Sbjct: 1   MTSYGTIPTSTAPGTSSDLDFVSRGKQRLKAGLATRVPWRLMFDFHSFTLPFNFHETFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IK N+ YFRMNY II+L+IL  SL+WHPISLIV  AMLAVWLFLYFLRDEPL  FGRLI+
Sbjct: 61  IKTNIVYFRMNYVIIVLLILFFSLIWHPISLIVFTAMLAVWLFLYFLRDEPLILFGRLIN 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DR+V+AVL+V TL FLFLT ATLNILLS+LIGAVLVLIH+A+RKTDDLFLDE AT V+T 
Sbjct: 121 DRLVMAVLSVFTLVFLFLTKATLNILLSLLIGAVLVLIHAALRKTDDLFLDEGATTVYTF 180

Query: 181 GSNAPGSSTS 190
           GS+APG+S S
Sbjct: 181 GSDAPGTSVS 190

[Close]

BLAST of Cp4.1LG17g05030 vs. ExPASy TrEMBL
Match: A0A0A0K9N1 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_7G451400 PE=3 SV=1)

HSP 1 Score: 276 bits (705), Expect = 5.89e-92
Identity = 150/191 (78.53%), Postives = 166/191 (86.91%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           M SYGTIPT+   GTSSDL+FVSR KQRLKAGLATRVPWRLMFDFHSF LP NFHE FSR
Sbjct: 1   MTSYGTIPTSTAPGTSSDLDFVSRGKQRLKAGLATRVPWRLMFDFHSFTLPLNFHETFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IK N+ YFRMNY II+L+IL  SL+WHPISLIVL AMLAVWLFLYFLRDEPL   GRLI+
Sbjct: 61  IKTNIVYFRMNYVIIVLLILFSSLIWHPISLIVLTAMLAVWLFLYFLRDEPLILLGRLIN 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
            R+V+AVL+V TL FLFLT ATLNILLS+LIGAVLVLIH+A+RKTDDLFLDE AT V+T 
Sbjct: 121 YRLVMAVLSVFTLVFLFLTKATLNILLSLLIGAVLVLIHAALRKTDDLFLDEGATTVYTF 180

Query: 181 GSNAPGSSTSF 191
           GS+APG+S SF
Sbjct: 181 GSDAPGTSVSF 191

[Close]

BLAST of Cp4.1LG17g05030 vs. ExPASy TrEMBL
Match: A0A5D3C0B5 (Cytochrome p450 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00810 PE=3 SV=1)

HSP 1 Score: 281 bits (718), Expect = 6.69e-90
Identity = 151/190 (79.47%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           M SYGTIPT+   GTSSDL+FVSR KQRLKAGLATRVPWRLMFDFHSF LPFNFHE FSR
Sbjct: 293 MTSYGTIPTSTAPGTSSDLDFVSRGKQRLKAGLATRVPWRLMFDFHSFTLPFNFHETFSR 352

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IK N+ YFRMNY II+L+IL  SL+WHPISLIV  AMLAVWLFLYFLRDEPL  FGRLI+
Sbjct: 353 IKTNIVYFRMNYVIIVLLILFFSLIWHPISLIVFTAMLAVWLFLYFLRDEPLILFGRLIN 412

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DR+V+AVL+V TL FLFLT ATLNILLS+LIGAVLVLIH+A+RKTDDLFLDE AT V+T 
Sbjct: 413 DRLVMAVLSVFTLVFLFLTKATLNILLSLLIGAVLVLIHAALRKTDDLFLDEGATTVYTF 472

Query: 181 GSNAPGSSTS 190
           GS+APG+S S
Sbjct: 473 GSDAPGTSVS 482

[Close]

BLAST of Cp4.1LG17g05030 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 203.4 bits (516), Expect = 1.7e-52
Identity = 111/181 (61.33%), Postives = 137/181 (75.69%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           M +YG IPT++ +    D+E +SRAK R+KAGLATR  WR+MFDFHS  LP    +AF+R
Sbjct: 1   MTNYGAIPTSSHASPLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IK NLAYFRMNYAI++LI++  SL+WHP SLIV   ++ VW+FLYFLRDEP+  F   ID
Sbjct: 61  IKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQID 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DR VL VL+VLT+  L LTNAT NI+ +++ GAVLVLIHS VRKT+DLFLDEEA    T 
Sbjct: 121 DRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAATTETS 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]

BLAST of Cp4.1LG17g05030 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-50
Identity = 111/177 (62.71%), Postives = 135/177 (76.27%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           M +YG IPT++    + DLE++SRAK R+K+GLATR PW+ MFDF S  LP  F +A SR
Sbjct: 1   MTNYGAIPTSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IK NL YFR NYAI +L IL LSLL+HP SLIVL+ ++  W+FLYFLRDEPL  FG  ID
Sbjct: 61  IKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQID 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAV 178
           DR VL  L+VLT+  L LT+AT NIL S+L  AVLVLIH+AVR++D+LFLDEEA AV
Sbjct: 121 DRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAV 177

[Close]

BLAST of Cp4.1LG17g05030 vs. TAIR 10
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4 )

HSP 1 Score: 179.9 bits (455), Expect = 2.0e-45
Identity = 103/188 (54.79%), Postives = 132/188 (70.21%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSR 60
           MA+   I T++ +  + + E +SRAKQR+K GLATR  WR+MFD HS  LP    + FSR
Sbjct: 1   MANNDEITTSSHASPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSR 60

Query: 61  IKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLID 120
           IK NLAYFR NYAI++L ++  SL+WHP SLIV   ++ +W+FLYFLRD PL  F   ID
Sbjct: 61  IKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQID 120

Query: 121 DRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAVFTV 180
           DR VL  L+V+T+  L LTNAT NI+ +++ GAVLVLIH+ +RKTDDLFLDEEA    T 
Sbjct: 121 DRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAATTETS 180

Query: 181 GSNAPGSS 189
           G  +  SS
Sbjct: 181 GLTSHPSS 188

[Close]

BLAST of Cp4.1LG17g05030 vs. TAIR 10
Match: AT1G17700.1 (prenylated RAB acceptor 1.F1 )

HSP 1 Score: 150.2 bits (378), Expect = 1.7e-36
Identity = 87/178 (48.88%), Postives = 124/178 (69.66%), Query Frame = 0


Query: 1   MASYGTIPTTATSGTSSDLEFVSRA-KQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFS 60
           M +YGT    +++  +  LE+++R   Q  ++GLATR PW+ M D  SFN P       +
Sbjct: 1   MTTYGT-NQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVIT 60

Query: 61  RIKNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRDEPLFFFGRLI 120
           RI+ N  YF+ NY I++L  + LSL+W+P SL+VL A+L  WLFLYFLRDEPL  F R I
Sbjct: 61  RIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREI 120

Query: 121 DDRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEATAV 178
           D R+VL +++V+TL+ LFLT+A LNI ++I+ GA+ VL H+AVRKT+DLF  +E T++
Sbjct: 121 DHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETSL 177

[Close]

BLAST of Cp4.1LG17g05030 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-25
Identity = 73/193 (37.82%), Postives = 120/193 (62.18%), Query Frame = 0


Query: 2   ASYGTIPTTATSGTSSDLEFVSRAKQRLKAGLATRVPWRLMFDFHSFNLPFNFHEAFSRI 61
           A  G +  ++TS T+      +RAKQ  ++ + T  PWR + D  + +LP  + EA + +
Sbjct: 13  AGGGGVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHL 72

Query: 62  KNNLAYFRMNYAIILLIILLLSLLWHPISLIVLAAMLAVWLFLYFLRD--EPLFFFGRLI 121
           K+N++YFR NYA+ +L I+ L L++HP+S+I    +   W+ LYF RD  + +   G+ +
Sbjct: 73  KHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEV 132

Query: 122 DDRVVLAVLAVLTLAFLFLTNATLNILLSILIGAVLVLIHSAVRKTDDLFLDEEAT---A 181
           DD++VL +L+++T+  L  T+   N+L+S++IG ++V  H A R TDDLFLDEE+     
Sbjct: 133 DDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGG 192

Query: 182 VFTVGS-NAPGSS 189
           + + GS N P SS
Sbjct: 193 LVSAGSGNRPPSS 205

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g05030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIC6	2.3e-51	61.33	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9C889	4.9e-49	62.71	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]
Q9LIC7	2.8e-44	54.79	PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1	[more]
Q9FZ63	2.4e-35	48.88	PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1	[more]
Q9FRR1	3.2e-24	37.82	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]

BLAST of Cp4.1LG17g05030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964339.1	1.68e-118	100.00	PRA1 family protein F3-like [Cucurbita moschata] >XP_023514624.1 PRA1 family pro...	[more]
XP_023000399.1	6.57e-116	98.43	PRA1 family protein F3-like [Cucurbita maxima]	[more]
KAG7014025.1	1.34e-95	82.63	PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6575482.1	3.03e-94	82.63	PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008462362.1	1.28e-93	79.47	PREDICTED: PRA1 family protein F3 [Cucumis melo]	[more]

BLAST of Cp4.1LG17g05030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HMV8	8.15e-119	100.00	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111464378 PE=3 SV=1	[more]
A0A6J1KJT5	3.18e-116	98.43	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111494658 PE=3 SV=1	[more]
A0A1S3CGR4	6.18e-94	79.47	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103500735 PE=3 SV=1	[more]
A0A0A0K9N1	5.89e-92	78.53	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_7G451400 PE=3 SV=1	[more]
A0A5D3C0B5	6.69e-90	79.47	Cytochrome p450 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G0081...	[more]

BLAST of Cp4.1LG17g05030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13720.1	1.7e-52	61.33	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	3.5e-50	62.71	PRA1 (Prenylated rab acceptor) family protein	[more]
AT3G13710.1	2.0e-45	54.79	prenylated RAB acceptor 1.F4	[more]
AT1G17700.1	1.7e-36	48.88	prenylated RAB acceptor 1.F1	[more]
AT1G08770.1	2.3e-25	37.82	prenylated RAB acceptor 1.E	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 33..173 e-value: 4.6E-46 score: 156.0
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..177
None	No IPR available	PANTHER	PTHR19317:SF2	PRA1 FAMILY PROTEIN F2	coord: 1..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g05030.1	Cp4.1LG17g05030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen