Cp4.1LG17g03390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g03390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	COP9 signalosome complex subunit 1-like
Location	Cp4.1LG17: 2421039 .. 2423510 (+)
RNA-Seq Expression	Cp4.1LG17g03390
Synteny	Cp4.1LG17g03390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCAAAGAGCCAACAATTCCCTCTCACCCACTTCAAGAAATAAACGGCTACAATAACAAGAATCTTTCCCTCCGGCCATACTCCGGCGAAACTCAGGCGAAACTCCGGTGTAATCGACAAACAAACATGTGGGAAGCCGGATCCAGTAGAAACCTCGACATCACTTTTCAAGAATGCAATTCTATGATCCCTTACCTACCATTCTTGATGGGCAACCAATTCGACATTCAAGCCTACGCCGACAAATACCCGACTAGAACCAAGATCATACGCCTCCTAGCCCTCGCCCATCACTGCCACGGCCGCAACGACGATCGAGAATTAGAAGCGCTGAAAATCGCCTATAAAGAGGCCAAGAAGGGCAAGGATGTGCAACTATTCGCCACAGTCGTCGAGAAAATCAATGGAAGATTATCCCCAGAGTACGACATGGATGAAGATTGGTGCAATGAAGTGATAAGAAATTGGGAGGAGAATAGGGTGAGATTAGGAGAAGAGGCATCGAAATGCCAGGTATGAAAGAAGGAACGAACGAACAGATTAATAAAAATAATGGGTTTGATCGAAGGATGCTTATTTGTTATAAATGAATTAACGTAGGACGATTACGAGAAAGGATTGGCTTACGCGGAGGACGACACAAAAGCTGCATGCAAGAAGGCAGCAAATATGTTCTACATGCATGGGGAAGCAGATGCTGCTAGAGTATGGTACTTGGCTGCCATACGTTACTGCAGGGTTGAGGTGGAGTATTGGGAGATGTTCATGCGCTTTGTTTTGTTGTTCATCGAGTGGGGCAACTTTCCAAGAGCCCAATACACTGCCATTGAAGGCCTCAAGCATAAGCACGATTTCAACATGGACTCCTTCACTGAAAATACTCTCCATTCTACTATTGGCTTGACTTCCATTAGATATAGATCGTTTACGCACGCCGCGCTTCGGGTTTGCTTTTTTTTTTTTTTGTTTCTTTTGTTTTATGTTATCGGGTTGCGTTTATATGTTGCGTATTTATTTGTAGTTCTTGCAAACGGGTAAAGAAGTGGGTAACCAATTTTCGATGATTCTGGCTGATCATGATATTGCAACGTATGGTGCGCTTTGTACGCTTGCAACGTTTGAGCAAGAGGAGTTGCAGGTATCGATTTTAATGGTGGTATGCACGAAGAATCATATGAGCTGATTATCGGGTTTTTAATATGGGCAGGATTGTATTTTTGAGAATAAGGATTTTCAATCTTATTTGGATTCAATGATTGAAGTCAAAGAGCTTCTCCATGATTTCTGCTCAAGGTCGGTATCGGTCTACAAGAAGTCTGTATCCTTCTTTATCTCTAAAAATAGGGTGTTCTAAACACTCGAGCTATTCCATCCCCGTCGTCCATGGAACCCGTTCTAAATTATCCACCTTTTGTGAGATTATTTCTGAAGTAATCATAAAAAACAGTTTACGTTGGAAACCACCACCTCCTCCATAATAGTATGATATTATCCACTTTGAGCATAAATTCACGTGGTTTTGCTTTTAGTTTCTCTAAAGACTTCGTCACAATAGAGATAGTATTCCTTATAAACCCATGATTTTCTTCTTAATTAGCCGACGTGAGACTACTTCTCTCAATAATTGAAACTTTTTAAAGTCGGGAGTGGAATTATTATTATTATTTTTTACCTTTTTGTGCAGAGATTATTCTTCAGTCTTCCGACATCTTGCTAATCTTCGAGAATGGTTATTGTTCGACATACATTTCTTCGATCGATTCGAAGAATTGCATGAAAAAATCAGAAATAAAGCTATTGTCCAATACGTTCGACCATTTTCGGTGATTGATTTGAAGACGATGGCAGAGATTTTCAACACAAGCGTTGAAGATCTTAAGAAGGAACTTGTAACTTTGATACTTGATGACCAAATTAAGGTCTTGGATTTTGAAGCTCTCATCTCAGCTTTCTAAAATTTTGGTCATTTCTTGTTACTAATCTTCAACAAATGAATGTTTTGTGTTGCAGGCCAAGATTGACTCAATCGAAAACGTTCTTCATGTACGAACAGACGATACCATAGCCAATTTCAAAAAACTTCTACAACGTTGTAGCGAAATTGAACGTGATGCGAGGACCATTCTATTATTTAACGCAGTATTTAACTATCCCTATGTTCACAATGAAGAATGATTTGTTCATGTGATCATAGGAAGTCTTGAAATTTCTTGACATAGTTCATGTGATGGCGATCGGTATGGAAGGACAAATTTGTTGATGCGTTCTTGTTGAGATTTTTTTTTTTTTTTTCATTCTATTACAGTAAATGAGACACTCGACACCTTTTTTGAATCTCCTTCTTTAGTTCCTTTCACTCAGTTGGTACCGTTAGGCATGTAAATTTGAAAATTGGCGTCGCTCATGGTTCTAACTCAATACTGAACTTCACTTCATTTATCGGAGTAATCCTGACAATTAATTAGAAAAT

mRNA sequence

CAACCAAAGAGCCAACAATTCCCTCTCACCCACTTCAAGAAATAAACGGCTACAATAACAAGAATCTTTCCCTCCGGCCATACTCCGGCGAAACTCAGGCGAAACTCCGGTGTAATCGACAAACAAACATGTGGGAAGCCGGATCCAGTAGAAACCTCGACATCACTTTTCAAGAATGCAATTCTATGATCCCTTACCTACCATTCTTGATGGGCAACCAATTCGACATTCAAGCCTACGCCGACAAATACCCGACTAGAACCAAGATCATACGCCTCCTAGCCCTCGCCCATCACTGCCACGGCCGCAACGACGATCGAGAATTAGAAGCGCTGAAAATCGCCTATAAAGAGGCCAAGAAGGGCAAGGATGTGCAACTATTCGCCACAGTCGTCGAGAAAATCAATGGAAGATTATCCCCAGAGTACGACATGGATGAAGATTGGTGCAATGAAGTGATAAGAAATTGGGAGGAGAATAGGGTGAGATTAGGAGAAGAGGCATCGAAATGCCAGGACGATTACGAGAAAGGATTGGCTTACGCGGAGGACGACACAAAAGCTGCATGCAAGAAGGCAGCAAATATGTTCTACATGCATGGGGAAGCAGATGCTGCTAGAGTATGGTACTTGGCTGCCATACGTTACTGCAGGGTTGAGGTGGAGTATTGGGAGATGTTCATGCGCTTTGTTTTGTTGTTCATCGAGTGGGGCAACTTTCCAAGAGCCCAATACACTGCCATTGAAGGCCTCAAGCATAAGCACGATTTCAACATGGACTCCTTCACTGAAAATACTCTCCATTCTACTATTGGCTTGACTTCCATTAGATATAGATCGTTTACGCACGCCGCGCTTCGGTTCTTGCAAACGGGTAAAGAAGTGGGTAACCAATTTTCGATGATTCTGGCTGATCATGATATTGCAACGTATGGTGCGCTTTGTACGCTTGCAACGTTTGAGCAAGAGGAGTTGCAGACGATGGCAGAGATTTTCAACACAAGCGTTGAAGATCTTAAGAAGGAACTTGTAACTTTGATACTTGATGACCAAATTAAGGCCAAGATTGACTCAATCGAAAACGTTCTTCATGTACGAACAGACGATACCATAGCCAATTTCAAAAAACTTCTACAACGTTGTAGCGAAATTGAACGTGATGCGAGGACCATTCTATTATTTAACGCAGTATTTAACTATCCCTATGTTCACAATGAAGAATGATTTGTTCATGTGATCATAGGAAGTCTTGAAATTTCTTGACATAGTTCATGTGATGGCGATCGGTATGGAAGGACAAATTTGTTGATGCGTTCTTGTTGAGATTTTTTTTTTTTTTTTCATTCTATTACAGTAAATGAGACACTCGACACCTTTTTTGAATCTCCTTCTTTAGTTCCTTTCACTCAGTTGGTACCGTTAGGCATGTAAATTTGAAAATTGGCGTCGCTCATGGTTCTAACTCAATACTGAACTTCACTTCATTTATCGGAGTAATCCTGACAATTAATTAGAAAAT

Coding sequence (CDS)

ATGTGGGAAGCCGGATCCAGTAGAAACCTCGACATCACTTTTCAAGAATGCAATTCTATGATCCCTTACCTACCATTCTTGATGGGCAACCAATTCGACATTCAAGCCTACGCCGACAAATACCCGACTAGAACCAAGATCATACGCCTCCTAGCCCTCGCCCATCACTGCCACGGCCGCAACGACGATCGAGAATTAGAAGCGCTGAAAATCGCCTATAAAGAGGCCAAGAAGGGCAAGGATGTGCAACTATTCGCCACAGTCGTCGAGAAAATCAATGGAAGATTATCCCCAGAGTACGACATGGATGAAGATTGGTGCAATGAAGTGATAAGAAATTGGGAGGAGAATAGGGTGAGATTAGGAGAAGAGGCATCGAAATGCCAGGACGATTACGAGAAAGGATTGGCTTACGCGGAGGACGACACAAAAGCTGCATGCAAGAAGGCAGCAAATATGTTCTACATGCATGGGGAAGCAGATGCTGCTAGAGTATGGTACTTGGCTGCCATACGTTACTGCAGGGTTGAGGTGGAGTATTGGGAGATGTTCATGCGCTTTGTTTTGTTGTTCATCGAGTGGGGCAACTTTCCAAGAGCCCAATACACTGCCATTGAAGGCCTCAAGCATAAGCACGATTTCAACATGGACTCCTTCACTGAAAATACTCTCCATTCTACTATTGGCTTGACTTCCATTAGATATAGATCGTTTACGCACGCCGCGCTTCGGTTCTTGCAAACGGGTAAAGAAGTGGGTAACCAATTTTCGATGATTCTGGCTGATCATGATATTGCAACGTATGGTGCGCTTTGTACGCTTGCAACGTTTGAGCAAGAGGAGTTGCAGACGATGGCAGAGATTTTCAACACAAGCGTTGAAGATCTTAAGAAGGAACTTGTAACTTTGATACTTGATGACCAAATTAAGGCCAAGATTGACTCAATCGAAAACGTTCTTCATGTACGAACAGACGATACCATAGCCAATTTCAAAAAACTTCTACAACGTTGTAGCGAAATTGAACGTGATGCGAGGACCATTCTATTATTTAACGCAGTATTTAACTATCCCTATGTTCACAATGAAGAATGA

Protein sequence

MWEAGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGRNDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVRLGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEYWEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTHAALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQTMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLQRCSEIERDARTILLFNAVFNYPYVHNEE

Homology

[Close]

BLAST of Cp4.1LG17g03390 vs. ExPASy Swiss-Prot
Match: P45432 (COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CSN1 PE=1 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 8.7e-39
Identity = 122/416 (29.33%), Postives = 178/416 (42.79%), Query Frame = 0


Query: 25  PFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGRNDDRELEALKIAYKEAKKGKDVQL 84
           P + G   DI+AYA  Y  RTKI+RLL +A+HC G N   + +AL++AY E KKG++ QL
Sbjct: 27  PIISGEPLDIEAYAALYKGRTKIMRLLFIANHC-GGNHALQFDALRMAYDEIKKGENTQL 86

Query: 85  FATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVRLGEEASKCQDDYEKGLAYAEDDTK 144
           F  VV KI  RL  +Y MD  WC  V R  E+ +V+L  E S  + +  K      +  +
Sbjct: 87  FREVVNKIGNRLGEKYGMDLAWCEAVDRRAEQKKVKLENELSSYRTNLIK------ESIR 146

Query: 145 AACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEYWEMFMRFVLLFIEWGNFPRAQYTA 204
                  + +Y  G    A   Y+    YC        M M  +L+ IE G F     T+
Sbjct: 147 MGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQF--THVTS 206

Query: 205 IEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTHAALRFLQTGKEVGNQFSMILADHD 264
                 ++   ++      L    GL  +  + +  AA +FL    E+GN ++ ++A  D
Sbjct: 207 YVNKAEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQD 266

Query: 265 IATYGALCTLATFEQEELQ----------------------------------------- 324
           IATYG LC LA+F++ EL+                                         
Sbjct: 267 IATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASL 326

Query: 325 ---------------------------------------TMAEIFNTSVEDLKKELVTLI 360
                                                   MA+ F TSV  L+KEL  LI
Sbjct: 327 KSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALI 386

[Close]

BLAST of Cp4.1LG17g03390 vs. ExPASy Swiss-Prot
Match: Q54QX3 (COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=csn1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.1e-17
Identity = 93/405 (22.96%), Postives = 164/405 (40.49%), Query Frame = 0


Query: 28  MGNQFDIQAYADKYPTRTKIIRLLALAHHCHGRNDDRELEALKIAYKEAKKGKDVQLFAT 87
           + N+FD++ Y + Y   TKI RL+ +A +C       E+EA  +A KE +K  +++L+ T
Sbjct: 26  ISNEFDLETYINNYSGFTKIHRLIFIADNC----KQLEVEAYNMALKEVQKTPNLELYNT 85

Query: 88  VVEKINGRLSPEYDMDEDWCNEVIRNWEENRVRLGEEASKCQDDYEKGLAYAEDDTKAAC 147
           ++ K +G L    ++D  +   + +       +L ++ +  + +  K      D  + A 
Sbjct: 86  IINKSHGIL----ELDPVYIENLSKKNSLQLDKLEQDLNTAKSNMVK------DSIRFAQ 145

Query: 148 KKAANMFYMHGEADAARVWYLAAIRYCRVEVEYWEMFMRFVLLFIEWGNFPRA-QYTAIE 207
                 +Y  G+   A   ++    YC        M    + L ++  N+  A  Y A  
Sbjct: 146 NDLGEFYYKIGDHQNALKCFIRTRDYCTTSKHVLAMCFNIIKLGVDTQNYTHAPSYIA-- 205

Query: 208 GLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTHAALRFLQTGKEVGNQFSMILADHDIA 267
             K +   ++D+ +   L S  GL ++    +  AA +F++T  E  N FS I++  DIA
Sbjct: 206 --KAEQSPDLDNVSNAKLRSVNGLYNLDGSRYKLAARKFIETPFEQSNVFSDIISPQDIA 265

Query: 268 TYGALCTLATFEQEELQ------------------------------------------- 327
            YG LC LATF++ EL+                                           
Sbjct: 266 YYGGLCALATFDRNELKKKVIDDPMFKNYLELVPELRELINDFYNTKYGSCLKYLDKMKP 325

Query: 328 -------------------------------------TMAEIFNTSVEDLKKELVTLILD 351
                                                 MA  FNT+V  L+KE+  LI++
Sbjct: 326 ILLLDIHLYKHVEILYQRIRSKALVQYFSPYQSVDMNIMASAFNTTVTLLEKEISKLIME 385

[Close]

BLAST of Cp4.1LG17g03390 vs. ExPASy Swiss-Prot
Match: Q5BD89 (COP9 signalosome complex subunit 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=csnA PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 4.1e-12
Identity = 68/286 (23.78%), Postives = 120/286 (41.96%), Query Frame = 0


Query: 3   EAGSSRNLD---ITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHG 62
           +A  S  +D   IT     S  P +      +F++++Y   Y  RT+  RL  L   C  
Sbjct: 20  QASGSMGVDPDPITGLVSTSAAPLVRVEEAPKFELESYIANYTGRTRFNRLY-LIGTC-- 79

Query: 63  RNDDRELEALKIAYKEAKKGKDVQLFATVVEKIN--GRLSPEYDMDEDWCNEVIRNWEEN 122
            +    ++ALK A  EAK GKDV  +   V+ +       PE  +D DW     +  +  
Sbjct: 80  -SSYLAVDALKAAIAEAKSGKDVARYLRAVQALADVAPNEPEATIDSDWVERSQKVVKAE 139

Query: 123 RVRLGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVE 182
             RL  E       Y+  L   ++  +   ++    ++  G+  +A   Y     +C   
Sbjct: 140 TDRLEHELR----GYKNNL--IKESIRMGNEELGQHYHRIGDLTSAFKAYSRMRDFCTTP 199

Query: 183 VEYWEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRS 242
                M  + + + IE G++   Q                +  +  + + +GL+ +   S
Sbjct: 200 SHIASMLFKIINVAIERGDWLNVQSNVHRLRSQGGKPEEQAKHQPKISAAMGLSQLHSGS 259

Query: 243 FTHAALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ 284
           +  AA  F+ T   +G+ F+ +L  +D+A YG LC LA+ ++ ELQ
Sbjct: 260 YLEAANSFIATDPSLGDTFNEVLTSNDVAVYGGLCALASMDRNELQ 295

[Close]

BLAST of Cp4.1LG17g03390 vs. ExPASy Swiss-Prot
Match: Q6NRT5 (COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04
Identity = 94/446 (21.08%), Postives = 155/446 (34.75%), Query Frame = 0


Query: 10  LDITFQECNSMIPYLPFLMGN-QFDIQAYADKYPTRTKIIRLLALAHHCHGRNDDRELEA 69
           +D   Q+    +P + +++ N   D++ YA  Y    +I RL  +A  C        +EA
Sbjct: 19  IDADPQDDQQNMPDVNYVVENPTLDLEQYASSYSGLMRIERLQFIADRC----PQLRVEA 78

Query: 70  LKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNE-------VIRNW-EENRVR 129
           LK+A    ++  +V ++  +  K+    S E     D   E       +  +W E  R +
Sbjct: 79  LKMALSFVQRTFNVDVYEDIHRKL-AEASREVQNAPDAVPEGSMEPPALDTSWVEATRKK 138

Query: 130 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMH----GEADAARVWYLAAIRYCRV 189
              +  K   D +    Y  +  K + ++  +    H    G+   A   Y  A  YC  
Sbjct: 139 ALLKLEKLDTDLKN---YKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTS 198

Query: 190 EVEYWEMFMRFVLLFIEWGNF-------PRAQYTAIEGLKHKHDFNMDSFTENTLHSTIG 249
                 M +  + + +   N+        +A+ T     +     +        L    G
Sbjct: 199 AKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAVLTKLKCAAG 258

Query: 250 LTSIRYRSFTHAALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ------ 309
           L  +  R +  AA  FL    +    F  +L+  ++A YG LC LATF+++ELQ      
Sbjct: 259 LAELAARKYKQAAKCFLLASFD-HCDFPELLSPSNVAVYGGLCALATFDRQELQRNVISS 318

Query: 310 ------------------------------------------------------------ 355
                                                                       
Sbjct: 319 SSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEIKDNLLLDMYLAPHVRTLYTQIRNRA 378

[Close]

BLAST of Cp4.1LG17g03390 vs. NCBI nr
Match: XP_023515153.1 (COP9 signalosome complex subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 704 bits (1818), Expect = 3.07e-254
Identity = 364/444 (81.98%), Postives = 364/444 (81.98%), Query Frame = 0


Query: 1   MWEAGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR 60
           MWEAGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR
Sbjct: 1   MWEAGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR 60

Query: 61  NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVR 120
           NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVR
Sbjct: 61  NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVR 120

Query: 121 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY 180
           LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY
Sbjct: 121 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY 180

Query: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH 240
           WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH
Sbjct: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH 240

Query: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ----------------- 300
           AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ                 
Sbjct: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQDCIFENKDFQSYLDSMI 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 EVKELLHDFCSRDYSSVFRHLANLREWLLFDIHFFDRFEELHEKIRNKAIVQYVRPFSVI 360

Query: 361 ---TMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLQRCSE 364
              TMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLQRCSE
Sbjct: 361 DLKTMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLQRCSE 420

[Close]

BLAST of Cp4.1LG17g03390 vs. NCBI nr
Match: KAG6593686.1 (COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 694 bits (1790), Expect = 5.65e-250
Identity = 358/444 (80.63%), Postives = 361/444 (81.31%), Query Frame = 0


Query: 1   MWEAGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR 60
           MWE GSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR
Sbjct: 1   MWEGGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR 60

Query: 61  NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVR 120
           NDDRELEALKIAYKEAKKGKDVQLFATVVE INGRLSPEYDMDEDWCNEVIRNWEENRVR
Sbjct: 61  NDDRELEALKIAYKEAKKGKDVQLFATVVENINGRLSPEYDMDEDWCNEVIRNWEENRVR 120

Query: 121 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY 180
           LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY
Sbjct: 121 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY 180

Query: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH 240
           WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH
Sbjct: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH 240

Query: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ----------------- 300
           AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ                 
Sbjct: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQDCIFENKDFQSYLDSMI 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 EVKELLHDFYSRDYSSVFRHLANLREWLLFDIHLFDRFEELHEKIRNKAIVQYVRPFSVI 360

Query: 361 ---TMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLQRCSE 364
              TMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRT+DTIANFKKLL+RCSE
Sbjct: 361 DLKTMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTEDTIANFKKLLERCSE 420

[Close]

BLAST of Cp4.1LG17g03390 vs. NCBI nr
Match: XP_022964496.1 (COP9 signalosome complex subunit 1-like [Cucurbita moschata])

HSP 1 Score: 692 bits (1786), Expect = 2.30e-249
Identity = 357/444 (80.41%), Postives = 360/444 (81.08%), Query Frame = 0


Query: 1   MWEAGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR 60
           MWE GSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR
Sbjct: 1   MWEGGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR 60

Query: 61  NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVR 120
           NDDRE+EALKIAYKEAKKGKDVQLFATV+EKINGRL PEYDMDEDWCNEVIRNWEENRVR
Sbjct: 61  NDDREIEALKIAYKEAKKGKDVQLFATVIEKINGRLYPEYDMDEDWCNEVIRNWEENRVR 120

Query: 121 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY 180
           LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY
Sbjct: 121 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY 180

Query: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH 240
           WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH
Sbjct: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH 240

Query: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ----------------- 300
           AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ                 
Sbjct: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQDCIFENKDFQSYLDSMI 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 EVKELLHDFCSRDYSSVFRHLANLREWLLFDIHLFDRFEELHEKIRKKAIVQYVRPFSVI 360

Query: 361 ---TMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLQRCSE 364
              TMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLL+RCSE
Sbjct: 361 DLKTMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLERCSE 420

[Close]

BLAST of Cp4.1LG17g03390 vs. NCBI nr
Match: XP_022999825.1 (COP9 signalosome complex subunit 1-like [Cucurbita maxima])

HSP 1 Score: 662 bits (1709), Expect = 1.22e-237
Identity = 338/444 (76.13%), Postives = 354/444 (79.73%), Query Frame = 0


Query: 1   MWEAGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR 60
           MWEAGSS N DIT+QECNSM P+LPFLMGNQFD+QAYADKYP+RTKIIRLL++AHHCHG 
Sbjct: 1   MWEAGSSTNFDITYQECNSMTPHLPFLMGNQFDVQAYADKYPSRTKIIRLLSIAHHCHGH 60

Query: 61  NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVR 120
           NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNW+ENRVR
Sbjct: 61  NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWKENRVR 120

Query: 121 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY 180
           LGEEASKCQDDYEKGLAYAE+DTKAACKKAANMFYMHGE DAARVWYLA IRYCRVE+EY
Sbjct: 121 LGEEASKCQDDYEKGLAYAEEDTKAACKKAANMFYMHGETDAARVWYLATIRYCRVELEY 180

Query: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH 240
           WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHK DFNMDSFTENT+HSTIGLTSIR+RSFTH
Sbjct: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKQDFNMDSFTENTIHSTIGLTSIRHRSFTH 240

Query: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ----------------- 300
           AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ                 
Sbjct: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQDCIFENKDFQSYLDSMI 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 EVKELLHDFCSRDYSSVFRRLANLREWLLFDIHLFDRFEELHKKIRNKAIVQYVRPFSVI 360

Query: 361 ---TMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLQRCSE 364
              TMAEIFNTSVEDLKKELV LILD+QIKAKIDSI+NVLHVR DDTIANFKKLL+RCSE
Sbjct: 361 DLKTMAEIFNTSVEDLKKELVALILDNQIKAKIDSIQNVLHVRRDDTIANFKKLLERCSE 420

[Close]

BLAST of Cp4.1LG17g03390 vs. NCBI nr
Match: XP_023005986.1 (COP9 signalosome complex subunit 1-like [Cucurbita maxima])

HSP 1 Score: 182 bits (461), Expect = 7.91e-51
Identity = 105/263 (39.92%), Postives = 147/263 (55.89%), Query Frame = 0


Query: 25  PFLMGNQ-FDIQAYADKYPTRTKIIRLLALAHHCHGRNDDR---ELEALKIAYKEAKKGK 84
           PFL G + FDIQAYA  Y   TKI+RL+ +A      N+ R   +LEAL+IAY  AKKGK
Sbjct: 35  PFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEALRIAYDIAKKGK 94

Query: 85  DVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVRLGEEASKCQDDYEKGLAYAE 144
           DV +F  +V KI+GRL P YDMDE+WCN VI         L   A  C+  Y +    AE
Sbjct: 95  DVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAE 154

Query: 145 DDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEYWEMFMRFVLLFIEWGNFPRA 204
           D  +      A  +  HG    A  +Y  ++ +CR +  Y E+  R +++ IE G F  +
Sbjct: 155 D-ARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFEAS 214

Query: 205 QYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTHAALRFLQTGKEVGNQFSMIL 264
              A +G+++    N++  T  TL   +GL   +   +  AA + L   KE+GN+FS ++
Sbjct: 215 AEIAEKGMQYP---NLNPITMETLRCALGLARFKSHCYKDAAHQLLGVSKELGNRFSKVM 274

Query: 265 ADHDIATYGALCTLATFEQEELQ 283
           A HDIAT+GALC LATF+  E +
Sbjct: 275 AAHDIATFGALCALATFDPIEFK 293

[Close]

BLAST of Cp4.1LG17g03390 vs. ExPASy TrEMBL
Match: A0A6J1HJ20 (COP9 signalosome complex subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464503 PE=3 SV=1)

HSP 1 Score: 692 bits (1786), Expect = 1.11e-249
Identity = 357/444 (80.41%), Postives = 360/444 (81.08%), Query Frame = 0


Query: 1   MWEAGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR 60
           MWE GSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR
Sbjct: 1   MWEGGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR 60

Query: 61  NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVR 120
           NDDRE+EALKIAYKEAKKGKDVQLFATV+EKINGRL PEYDMDEDWCNEVIRNWEENRVR
Sbjct: 61  NDDREIEALKIAYKEAKKGKDVQLFATVIEKINGRLYPEYDMDEDWCNEVIRNWEENRVR 120

Query: 121 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY 180
           LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY
Sbjct: 121 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY 180

Query: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH 240
           WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH
Sbjct: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH 240

Query: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ----------------- 300
           AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ                 
Sbjct: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQDCIFENKDFQSYLDSMI 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 EVKELLHDFCSRDYSSVFRHLANLREWLLFDIHLFDRFEELHEKIRKKAIVQYVRPFSVI 360

Query: 361 ---TMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLQRCSE 364
              TMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLL+RCSE
Sbjct: 361 DLKTMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLERCSE 420

[Close]

BLAST of Cp4.1LG17g03390 vs. ExPASy TrEMBL
Match: A0A6J1KGN9 (COP9 signalosome complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494181 PE=3 SV=1)

HSP 1 Score: 662 bits (1709), Expect = 5.93e-238
Identity = 338/444 (76.13%), Postives = 354/444 (79.73%), Query Frame = 0


Query: 1   MWEAGSSRNLDITFQECNSMIPYLPFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGR 60
           MWEAGSS N DIT+QECNSM P+LPFLMGNQFD+QAYADKYP+RTKIIRLL++AHHCHG 
Sbjct: 1   MWEAGSSTNFDITYQECNSMTPHLPFLMGNQFDVQAYADKYPSRTKIIRLLSIAHHCHGH 60

Query: 61  NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVR 120
           NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNW+ENRVR
Sbjct: 61  NDDRELEALKIAYKEAKKGKDVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWKENRVR 120

Query: 121 LGEEASKCQDDYEKGLAYAEDDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEY 180
           LGEEASKCQDDYEKGLAYAE+DTKAACKKAANMFYMHGE DAARVWYLA IRYCRVE+EY
Sbjct: 121 LGEEASKCQDDYEKGLAYAEEDTKAACKKAANMFYMHGETDAARVWYLATIRYCRVELEY 180

Query: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTH 240
           WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHK DFNMDSFTENT+HSTIGLTSIR+RSFTH
Sbjct: 181 WEMFMRFVLLFIEWGNFPRAQYTAIEGLKHKQDFNMDSFTENTIHSTIGLTSIRHRSFTH 240

Query: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ----------------- 300
           AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQ                 
Sbjct: 241 AALRFLQTGKEVGNQFSMILADHDIATYGALCTLATFEQEELQDCIFENKDFQSYLDSMI 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 EVKELLHDFCSRDYSSVFRRLANLREWLLFDIHLFDRFEELHKKIRNKAIVQYVRPFSVI 360

Query: 361 ---TMAEIFNTSVEDLKKELVTLILDDQIKAKIDSIENVLHVRTDDTIANFKKLLQRCSE 364
              TMAEIFNTSVEDLKKELV LILD+QIKAKIDSI+NVLHVR DDTIANFKKLL+RCSE
Sbjct: 361 DLKTMAEIFNTSVEDLKKELVALILDNQIKAKIDSIQNVLHVRRDDTIANFKKLLERCSE 420

[Close]

BLAST of Cp4.1LG17g03390 vs. ExPASy TrEMBL
Match: A0A6J1KWI7 (COP9 signalosome complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498865 PE=4 SV=1)

HSP 1 Score: 182 bits (461), Expect = 3.83e-51
Identity = 105/263 (39.92%), Postives = 147/263 (55.89%), Query Frame = 0


Query: 25  PFLMGNQ-FDIQAYADKYPTRTKIIRLLALAHHCHGRNDDR---ELEALKIAYKEAKKGK 84
           PFL G + FDIQAYA  Y   TKI+RL+ +A      N+ R   +LEAL+IAY  AKKGK
Sbjct: 35  PFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRSMQLEALRIAYDIAKKGK 94

Query: 85  DVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVRLGEEASKCQDDYEKGLAYAE 144
           DV +F  +V KI+GRL P YDMDE+WCN VI         L   A  C+  Y +    AE
Sbjct: 95  DVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAE 154

Query: 145 DDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEYWEMFMRFVLLFIEWGNFPRA 204
           D  +      A  +  HG    A  +Y  ++ +CR +  Y E+  R +++ IE G F  +
Sbjct: 155 D-ARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFEAS 214

Query: 205 QYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTHAALRFLQTGKEVGNQFSMIL 264
              A +G+++    N++  T  TL   +GL   +   +  AA + L   KE+GN+FS ++
Sbjct: 215 AEIAEKGMQYP---NLNPITMETLRCALGLARFKSHCYKDAAHQLLGVSKELGNRFSKVM 274

Query: 265 ADHDIATYGALCTLATFEQEELQ 283
           A HDIAT+GALC LATF+  E +
Sbjct: 275 AAHDIATFGALCALATFDPIEFK 293

[Close]

BLAST of Cp4.1LG17g03390 vs. ExPASy TrEMBL
Match: A0A6J1H3C9 (COP9 signalosome complex subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460031 PE=3 SV=1)

HSP 1 Score: 181 bits (460), Expect = 1.84e-49
Identity = 105/264 (39.77%), Postives = 147/264 (55.68%), Query Frame = 0


Query: 25  PFLMGNQ-FDIQAYADKYPTRTKIIRLLALAHHCHGRNDDR---ELEALKIAYKEAKKGK 84
           PFL G + FDIQAYA  Y   TKI+RL+ +A      N+ R   +LEAL+IAY  AKKG 
Sbjct: 35  PFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGNANERRRRMQLEALRIAYDIAKKGN 94

Query: 85  DVQLFATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVRLGEEASKCQDDYEKGLAYAE 144
           DV +F  +V KI+GRL P YDMDE+WCN VI         L   A  C+  Y +    AE
Sbjct: 95  DVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAE 154

Query: 145 DDTKAACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEYWEMFMRFVLLFIEWGNFPRA 204
           D  +      A  +  HG    A  +Y  ++ +CR +  Y E+  R +++ IE G F  +
Sbjct: 155 D-ARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSELLRRLIVVVIELGQFEAS 214

Query: 205 QYTAIEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTHAALRFLQTGKEVGNQFSMIL 264
              A +G+++    N++  T  TL   +GL   +   +  AA + L   KE+GN+FS ++
Sbjct: 215 GEIAEKGMQYP---NLNPITMETLRCALGLARFKAHCYKDAAHQLLGVSKELGNRFSKVM 274

Query: 265 ADHDIATYGALCTLATFEQEELQT 284
           A HDIAT+GALC LATF+  E +T
Sbjct: 275 AAHDIATFGALCALATFDPIEFKT 294

[Close]

BLAST of Cp4.1LG17g03390 vs. ExPASy TrEMBL
Match: A0A6P4D5J4 (COP9 signalosome complex subunit 1 OS=Arachis duranensis OX=130453 GN=LOC107485598 PE=4 SV=1)

HSP 1 Score: 181 bits (458), Expect = 4.68e-49
Identity = 126/415 (30.36%), Postives = 186/415 (44.82%), Query Frame = 0


Query: 27  LMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGRNDDRELEALKIAYKEAKKGKDVQLFA 86
           + G+QFDI+AYA  Y  RTKI RLL +A HC G N   +LEAL++A+ E KKG++ QLF 
Sbjct: 36  ISGDQFDIEAYASLYSGRTKIARLLFIADHCGGDNSAMQLEALRMAFDEIKKGENTQLFR 95

Query: 87  TVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVRLGEEASKCQDDYEKGLAYAEDDTKAA 146
            VV KI GRL P+Y MD  WC  V R  E+ + +L  E +  + +  K      +  +  
Sbjct: 96  EVVNKIGGRLGPDYTMDVAWCETVDRRAEQKKEKLDNELNAYRTNLIK------ESIRMG 155

Query: 147 CKKAANMFYMHGEADAARVWYLAAIRYCRVEVEYWEMFMRFVLLFIEWGNFPR-AQYTAI 206
                + +Y HG+   A   Y+    YC        M M  +L+ IE G F   A Y + 
Sbjct: 156 YNDFGDFYYAHGQLGEAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVASYVSK 215

Query: 207 EGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTHAALRFLQTGKEVGNQFSMILADHDI 266
               H+    +D  T   L    GL ++  + +  AA +FL+T  E+G+ ++ ++A  D+
Sbjct: 216 AEQTHEA---LDQITAAKLRCAAGLANLVSKKYKLAARKFLETAPELGSHYNEVIAPQDV 275

Query: 267 ATYGALCTLATFEQEEL------------------------------------------- 326
           ATYG LC LATF++ EL                                           
Sbjct: 276 ATYGGLCALATFDRTELKAKVIDNINFRNFLELVPEVRELINDFYSSHYASCLEYLANLK 335

Query: 327 -------------------------------------QTMAEIFNTSVEDLKKELVTLIL 359
                                                Q MA  F T++  L+KELV LI 
Sbjct: 336 ANLLLDIHLHDHVETLYDQIRHKALIQYTLPFVSVDLQMMASAFKTTITGLEKELVALIT 395

[Close]

BLAST of Cp4.1LG17g03390 vs. TAIR 10
Match: AT3G61140.1 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain )

HSP 1 Score: 162.5 bits (410), Expect = 6.2e-40
Identity = 122/416 (29.33%), Postives = 178/416 (42.79%), Query Frame = 0


Query: 25  PFLMGNQFDIQAYADKYPTRTKIIRLLALAHHCHGRNDDRELEALKIAYKEAKKGKDVQL 84
           P + G   DI+AYA  Y  RTKI+RLL +A+HC G N   + +AL++AY E KKG++ QL
Sbjct: 27  PIISGEPLDIEAYAALYKGRTKIMRLLFIANHC-GGNHALQFDALRMAYDEIKKGENTQL 86

Query: 85  FATVVEKINGRLSPEYDMDEDWCNEVIRNWEENRVRLGEEASKCQDDYEKGLAYAEDDTK 144
           F  VV KI  RL  +Y MD  WC  V R  E+ +V+L  E S  + +  K      +  +
Sbjct: 87  FREVVNKIGNRLGEKYGMDLAWCEAVDRRAEQKKVKLENELSSYRTNLIK------ESIR 146

Query: 145 AACKKAANMFYMHGEADAARVWYLAAIRYCRVEVEYWEMFMRFVLLFIEWGNFPRAQYTA 204
                  + +Y  G    A   Y+    YC        M M  +L+ IE G F     T+
Sbjct: 147 MGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQF--THVTS 206

Query: 205 IEGLKHKHDFNMDSFTENTLHSTIGLTSIRYRSFTHAALRFLQTGKEVGNQFSMILADHD 264
                 ++   ++      L    GL  +  + +  AA +FL    E+GN ++ ++A  D
Sbjct: 207 YVNKAEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQD 266

Query: 265 IATYGALCTLATFEQEELQ----------------------------------------- 324
           IATYG LC LA+F++ EL+                                         
Sbjct: 267 IATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASL 326

Query: 325 ---------------------------------------TMAEIFNTSVEDLKKELVTLI 360
                                                   MA+ F TSV  L+KEL  LI
Sbjct: 327 KSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALI 386

[Close]

BLAST of Cp4.1LG17g03390 vs. TAIR 10
Match: AT3G12850.1 (COP9 signalosome complex-related / CSN complex-related )

HSP 1 Score: 63.9 bits (154), Expect = 3.0e-10
Identity = 55/212 (25.94%), Postives = 94/212 (44.34%), Query Frame = 0


Query: 33  DIQAYADKYPTRTKIIRLLALAHHCHGR--NDDRELEALKIAYKEAKKGK---DVQLFAT 92
           D++AY+  Y  R  ++RLL +A +  G    DD ELEAL++AY   +      D++LF  
Sbjct: 12  DVEAYSRNYEGRNLVLRLLHIAENSVGPMFTDDLELEALRLAYDLIRNDGIVCDMRLFTV 71

Query: 93  VVEKINGRLSPEYDMDEDWCNEVIRNWEENRVRLGEEASKCQDDYEKGLAYAEDDTKAAC 152
           + EKI GRL   Y +DE W      N+ +    L  +     D+ EK             
Sbjct: 72  IAEKIQGRLGEGYLLDEKWRLTKNNNFVKQDSILRNDLESATDELEKD------------ 131

Query: 153 KKAANMFYMHGEADAARVWYLAAIRYCRVEVEYWEMFMRFVLLFIEWGNFPRAQYTAIE- 212
           + A   +++H       + +    R    +V+  + +M  +L+ +E  NF    + ++E 
Sbjct: 132 RLALRQYWLHYHCGQMAIVFRPYPR----QVQTIDAYMATLLVALETRNFGELPHRSVEQ 191

Query: 213 ----GLKHKHDFNMDSF--TENTLHSTIGLTS 233
                +K  + F +D F    N L S   +T+
Sbjct: 192 IAYCNVKRAYGFKIDCFKSLSNLLESKYQVTA 207

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g03390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45432	8.7e-39	29.33	COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CSN1 PE=1 ...	[more]
Q54QX3	1.1e-17	22.96	COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=csn1 ...	[more]
Q5BD89	4.1e-12	23.78	COP9 signalosome complex subunit 1 OS=Emericella nidulans (strain FGSC A4 / ATCC...	[more]
Q6NRT5	2.4e-04	21.08	COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1	[more]

BLAST of Cp4.1LG17g03390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515153.1	3.07e-254	81.98	COP9 signalosome complex subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6593686.1	5.65e-250	80.63	COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022964496.1	2.30e-249	80.41	COP9 signalosome complex subunit 1-like [Cucurbita moschata]	[more]
XP_022999825.1	1.22e-237	76.13	COP9 signalosome complex subunit 1-like [Cucurbita maxima]	[more]
XP_023005986.1	7.91e-51	39.92	COP9 signalosome complex subunit 1-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG17g03390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJ20	1.11e-249	80.41	COP9 signalosome complex subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KGN9	5.93e-238	76.13	COP9 signalosome complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494...	[more]
A0A6J1KWI7	3.83e-51	39.92	COP9 signalosome complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498...	[more]
A0A6J1H3C9	1.84e-49	39.77	COP9 signalosome complex subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6P4D5J4	4.68e-49	30.36	COP9 signalosome complex subunit 1 OS=Arachis duranensis OX=130453 GN=LOC1074855...	[more]

BLAST of Cp4.1LG17g03390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61140.1	6.2e-40	29.33	26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain	[more]
AT3G12850.1	3.0e-10	25.94	COP9 signalosome complex-related / CSN complex-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..131
None	No IPR available	GENE3D	1.25.40.570		coord: 30..284 e-value: 5.9E-47 score: 162.4
IPR045135	26S proteasome regulatory subunit Rpn7, N-terminal	PFAM	PF10602	RPN7	coord: 103..284 e-value: 4.6E-15 score: 55.8
IPR033008	COP9 signalosome complex subunit 1	PANTHER	PTHR14145:SF2	COP9 SIGNALOSOME COMPLEX SUBUNIT 1	coord: 29..283 coord: 282..356
IPR019585	26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1	PANTHER	PTHR14145	26S PROTESOME SUBUNIT 6	coord: 29..283 coord: 282..356
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 274..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g03390.1	Cp4.1LG17g03390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000338	protein deneddylation
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0005737	cytoplasm