Cp4.1LG17g03310 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g03310
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	high mobility group B protein 15-like
Location	Cp4.1LG17: 1660205 .. 1665958 (+)
RNA-Seq Expression	Cp4.1LG17g03310
Synteny	Cp4.1LG17g03310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACGAACCCGAACGCCCCGCCATAACGTATTCCTCATTTTCCTCCATAACTTCCGTATTTTTCAATTCCTAATTTGCCCTTCTCCTTCATCCAATGCTCTCGGTTACTTCTTGTTCTTGGTTTTCTATCGCATCAATGTCCTCTTAATTAGCACTGGTTATGGTTAGTTCTAATCCTTTCTTCTTTTTCATAATCTTTCTATTCTTTTCTTTTTTTGGGCATTTATGAATTTTCAATTCATCTTTTCTTCTCTTTATCTCTAAAGTAAGTATCCTTTCATGAATTTTTTTTTAAAAAACGACTGTTTATTTTGTCATTTCATCATCTGGATTGTTTGCATTTTGCATTTTCATAATTCATTTCAATAATACACTGTTCGAACACGGATTTAGTAACCATTAATTTCTACTCTGATTCGTGTTTTTCAATGTGGGGTTTCTTTATTTTAATGAATGGTTTCTTGAGAAATCTGCAAGTTTTGAAATCTGATATGGTGTCAGATAATGGGGAAATAGGGAGAAGAAGAAGAAGAAAAGAAGAAAAGAAGAAGAAGAAGAAGAAGGAAAAGTGCTTTTTGGCTTTGTCAATATAGAGGAGACAATTGTTTAATACCCATTAGATATCTTTGGAATGTCAGGGAAACGTCAATAGCTCTGTACTAGGCCTGAAACTTTCCCTGTGAGAGGGATTTATTGCAATGGCGCTTCTCTTAGCCTCCTTTTTCTAGCTTCTTTTTTCTAGTTCCTTGGGTTCAGCCCCCTTGGTTCTCTGAGATCAATTCATGGCTGTGGCAGCTTTGCTGCTGAGCCATTTTCTTTTTTGGGTCCTTGAATGCCTACCTTATTACTTGGAGTTATTTCATCTGTTCAGGTAGTTGTGGTGTTTCTTGTTATCTCAGTTCTAAACTTCTAATTTCCTTGAGGTTTCTGTTGTTTTTGGCCATTTATGAATCTTTGCATGCGATGTATAGTTAATTCAATCTTTGCATGGGTTATGAATCTCCATGAAGTTTCTGTTTGTATGCTATATAAAGGGAATTGTGGGAAGATTATCTTGGTGACTGGAGGAGAAGAATCAAAGCTGTTTATACATGTCTCTCTCTGATTTTCTCTATTGGTTTAAAAACCTTCCTGTGAGCTGCCTTGCTGTTGGTATTGTATGGTTTAATGGTTCAAGTATATAATACCCATATTCTCAGGGCATTCTTCAGCTTTCATTGTGGAACGAGTAAATAACATTGCATACTCAACGGCTATTGATACTTCTTGGATGTGAGGTAGACTGAATAGAAGTCACTGATAGTTCTCCATCCATTTGGGGCATATCATTGTTGCATCTGTTCATTTTGTTAGCCTATGACATTCATTATAAACGTGATTCCACATTGGTTGGGAGATGAATGAAACATTCGTTATAAGGGTGTGGAAACCTCTTCCTAGAAGATGTGTTTTAAAAACGTTGAGGGAAAGCCTGAAAGGGAAAGCCCAGAGGACAATATCTGCTTGTGGTGGGCTTGAGCGGTTATTAATGGTATCAGAGCTAGACATCGGGCGATGTGCCAATGAGGAGGCTGAGCCTCAAAGGGGGTGGACACGAGACGGTGTACCAGTAAAGATGCTGGACTCCAAAGGGGGTGGATTGGAGGGGGGAGGGGTTCCCACATCAATTGGAGAAGGGAACGAGTGCCGATGCTGGGCCCGAAGGAGGGTGGATTGTGAGATCCCACATCGGTTGAGGAGGAGAATGAAGCATTCTTTACATGTGAGTGGAAATATTTCCTTAGTAGACGCGTTTTAAAAACTTTGAGGGGAATGCTGAAAGAGAAAGCTCAGAGAGGATAATATCTGCTAGCGGTGGGCTTGGTGTACAATACATTAGCGTTTCTGCCCTTAAGAATGAGCACAATTACTATACATTTTGGGGGTTTCTTGTCGTTCAAAACCTTTAGACAGCCAATGGTTCATATCTTTTCCCAACTTTAGGCATGGGGATTTGGGGTAGATTCATTTATTTCATCATTTTTCACATGTACCCATTACAATTGAATTAATCAGATGTAAGTATCACACACTCTCCATTTCTACTTCCACCTTAGTTTCTAACATCATTATGATTCAAAAGGCCTCTCATTTGAGATTTGTTCAACCTTTTATTGCTGTAGTGTTGTCTTCAAATTTTGTTTATAACACTGTGAGATATGTGCTTGCAGAGTTGATCGGTTGATGGTAGAAGAGGAAAGAACTGAAGCAGGCTGGGATAGCAAGAAGGAGTTGACCATGACATCGACTTCTTCTGCTGGGGGGAAGCAACTGGCCGTGGTTGAAGCTCCTTCTAACTGTGTTCCATACCCGCCACCGCAAACGACGTATGAGGATCTCATAGCCGATCCCAAGCTCTTTATGGCGTCCTTGGAAAAGCTCCATTCTATTATGGGAACCAAGTTCATGTACTTTTCTTCAAAATCTCCTCTTTTACCTGCCTTGTATTCCTGGTCTTGACATGGAAGTAATGTATGATTTTGCTTGTTTGAAAGATTTTTCAAACAAGTTCATGCACTTCTTATGTTTCACTTTCACCTCCCAAATGCAGGATCCCCATTATTGGTGGGAAAGAACTGGACCTGCATCGGCTTTTCGTGGAGGTCACTGCTCGTGGTGGCCTTGAGAAGGTAAAATAGACTTGCTATGAATATTGTGATCAATATTTTCATTTCTGAAACTTGATGATTGATATTTAGAGGGCATATATAAGGTGTTTATTTGAGTCTATTTCCAGCTTTTTCGTTCATTTGTATGATTGTTGAATATCTTTAGAAGGCTGTGGTTTTTTACTCTTCAAGTGATCAGTTTTGATGCTATAATCCTTTCTGAAAAAAGGGCTTGGGTTCTAAAAGAATGTTTCGTTCCTCTCTCTAATTGATTTGAGATCTCACAATCCACCCCTTTAGGGGCTCAACTTCCTCGCTAGCACACTGCTCGGTGTCTACCCCCCTTCAAGGCCCAGCGTCCTCGCTCGCACACCGCTCAGTGTCCACTCCCTTTGAGGCTCAACGTCCTCGATGGCACACTGCTCAGTGTCCACCCACCTTCGGAGCTTAGCATTCTCGTTGGTACACCGGTGGAACCTAGCTCTATACCACTTGTAACAGTCCAAGCCCACTGCTAGTAGATATTGTCTTCTTTGGGATTTTTCTTTCGAGCTTTCCCTCAAACGCGTCTGCTAGGGAGAGGTTTTCACACCTTTATAAAGAATGCTTTGTTTCTCTACGTAGTCTGTTAGGGAGAGGTTTTCACACCTTTATAAAGAATGCTTTGTTTCTCTCTCAAATTGACGTGGGATCTCATAGAATCTCATGCATAGCTCGTTGGGTGAATGGATAAAAGTTGAATCGTTCTAGTTAACATCTGTTGAAAATTTGGCAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTCAAATTTCCTTCGACAGCCACCAATGCATCTTTTGTGCTGAGGAAGTATTATCTCTCATTAATTCATCATTTTGAACAGATTTACTTCTTTAAAGCCGTGGGATGGACACCAAAAGTTTCTGGTACCCTTTGTTAAAATAGAGCACCCTTCTTTTTCCTGAAGAGCATGCCATATTCTAACATAACAATCTTTCAGATTCCTCTCCAACCCCAAGTGCAGTGCCAATTCCGACACAAGGGACGATGACCTCTATGTTGCCGCCATCCAATCGGCCAGCACCCCAGCAGCAGCCGCAGACTACTGCAACCGAACTTCCAGCAGGTGTCTTCTTTACGAGTTCGTATGATATGCCATATAAGTACACTTAGTTTCTCTGATTCATAAACGGATAACTCTTTTCAACTTACAGTTGCTCCGAGTTCGGTACCACCAGCGGGAGGGTTTCCGGTGGTTGGAGTCATTGATGGAAAATTTGAAAGCGGATATCTCGTTACTGTTACTGTAGGAAATGAGAAGCTAAAAGGTGTGCTTTATATGACTCCTCCAGAGCAACCTGCTCAACAAGTGTTCCAGCCTGGTAGTGTTTTCACCAAAGATGGTACTACCTCCACTACACCAAATGCTCAGCGCCGTCGCCGGAGGAAGAAATCCGAGATCAAACGAAGGGATCCAGCTCATCCAAAGCCGAATAGAAGTGGCTACAATTTCTTCTTCGCCGAGCAGCATGCTAGACTCAAACCATTACATCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGAGCTTTGGAATAAACTTAATGAGTCTGAAAAAACAGTAAGGATTTGCAATACCTCTTTAGTTTAGAATCTGTCACATTTGGTAATCTGTCACAGCCGGTGTTGATAGTTTTTTCTTTACTTGCAGGTTTATCAGGAGAAAGCTATGAAAGATAAAGAACGATACAGAATTGAGATGGAGAATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTCATGCAGTGCCATTACAGCAGCTTCTTCCTGGGACAGACCTGAATATGGTCTATGCTGCTGACAAAAACGAAGAAACCGAGGGTGGCGAACATCCTCATATGCCGTATAATGATACAATTTATGTTGAAGATAAGGAGGAGGAGGAAGAAGAGGAAGAGGACGAGGACGACGATGAGGAAGAAGGTGCAGCAGCACCTCAAGGAGTTGGCAATGTGGATGTTAACGTCTTGGCTGAGGAGGAACGCTGCGAGACTAGACCAGAACCAACAACAACAGCCATTATACAAGAGAGTAGCACGGTCAAGGACGATAAGGAAGTTTTCGCCGGGCATTCAGTGGTAATGGTGGATGTGGCAAATGAAGAACCAGAACCAGAACCAACAGCAACAGCCATTGTAGAAGATAAGGAAGTTTTCGCCAGGGATTCGATGGTAATGGTGGTGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTCGCCGGGGGTTCGATGGTAATGGTGGAGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTTGCCGGAGATTCGATGGTAATGGTGGAGGCGGAAAATGAAGAACCAGAACCAACAACAGCAGCCATTATAGAAGATAAGGAGGTTTTCGCGGGGGATTCGGTGGTAATGATGGAGGTGGCAAATGAAGAACCAGAACCAACAACCGCAGCCATTGTAGAAGATAAGGAGGTTTTCGCCGGGGATTCGGTGGTAATGATGGAGGCGACAAATGAAGGAACAGAAGCAACAAGAAGAGACATTATAGAAGATAAGGAAGTTTTTGTGGGGGATTCGTTGATAATGATGGAGGCAGCAAAGGAAGAAGCAGAGCCAACAACAACAGCCATTACAGAAGATTAAGATAGTAGCTAGCTTACCACCATTCCATTCATTGTCTCTAGCTTACCACCATTCATTTCTTCTAACCTTCCATTACTTGTAAAGAATCTCTTTTGTTTTGGGAAGAAATTTTGGTTGCCTTTTGTTCAACATTTCAACTGGATCCTTCATTCCCTACTTTGTTTCCTACTAGTTAACCTCCCTATCCAGGTTTGGATGCTGAACGAATGCTGAACGAAGGGCACGCGTCAATCATGTAAGTCACCCCACTGAATTTAGGTAGGATTTGATTGAGATGCATGCATGCTAGAATATTTATCTTTGGTAGTTAGTTTTACCAAAGGTATATAATGCTAGTATGTTTTATGTTTTA

mRNA sequence

ATGAAGAACGAACCCGAACGCCCCGCCATAACGTATTCCTCATTTTCCTCCATAACTTCCGTATTTTTCAATTCCTAATTTGCCCTTCTCCTTCATCCAATGCTCTCGGTTACTTCTTGTTCTTGGTTTTCTATCGCATCAATGTCCTCTTAATTAGCACTGGTTATGAGTTGATCGGTTGATGGTAGAAGAGGAAAGAACTGAAGCAGGCTGGGATAGCAAGAAGGAGTTGACCATGACATCGACTTCTTCTGCTGGGGGGAAGCAACTGGCCGTGGTTGAAGCTCCTTCTAACTGTGTTCCATACCCGCCACCGCAAACGACGTATGAGGATCTCATAGCCGATCCCAAGCTCTTTATGGCGTCCTTGGAAAAGCTCCATTCTATTATGGGAACCAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTGGACCTGCATCGGCTTTTCGTGGAGGTCACTGCTCGTGGTGGCCTTGAGAAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTCAAATTTCCTTCGACAGCCACCAATGCATCTTTTGTGCTGAGGAAGTATTATCTCTCATTAATTCATCATTTTGAACAGATTTACTTCTTTAAAGCCGTGGGATGGACACCAAAAGTTTCTGATTCCTCTCCAACCCCAAGTGCAGTGCCAATTCCGACACAAGGGACGATGACCTCTATGTTGCCGCCATCCAATCGGCCAGCACCCCAGCAGCAGCCGCAGACTACTGCAACCGAACTTCCAGCAGTTGCTCCGAGTTCGGTACCACCAGCGGGAGGGTTTCCGGTGGTTGGAGTCATTGATGGAAAATTTGAAAGCGGATATCTCGTTACTGTTACTGTAGGAAATGAGAAGCTAAAAGGTGTGCTTTATATGACTCCTCCAGAGCAACCTGCTCAACAAGTGTTCCAGCCTGGTAGTGTTTTCACCAAAGATGGTACTACCTCCACTACACCAAATGCTCAGCGCCGTCGCCGGAGGAAGAAATCCGAGATCAAACGAAGGGATCCAGCTCATCCAAAGCCGAATAGAAGTGGCTACAATTTCTTCTTCGCCGAGCAGCATGCTAGACTCAAACCATTACATCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGAGCTTTGGAATAAACTTAATGAGTCTGAAAAAACAGTTTATCAGGAGAAAGCTATGAAAGATAAAGAACGATACAGAATTGAGATGGAGAATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTCATGCAGTGCCATTACAGCAGCTTCTTCCTGGGACAGACCTGAATATGGTCTATGCTGCTGACAAAAACGAAGAAACCGAGGGTGGCGAACATCCTCATATGCCGTATAATGATACAATTTATGTTGAAGATAAGGAGGAGGAGGAAGAAGAGGAAGAGGACGAGGACGACGATGAGGAAGAAGGTGCAGCAGCACCTCAAGGAGTTGGCAATGTGGATGTTAACGTCTTGGCTGAGGAGGAACGCTGCGAGACTAGACCAGAACCAACAACAACAGCCATTATACAAGAGAGTAGCACGGTCAAGGACGATAAGGAAGTTTTCGCCGGGCATTCAGTGGTAATGGTGGATGTGGCAAATGAAGAACCAGAACCAGAACCAACAGCAACAGCCATTGTAGAAGATAAGGAAGTTTTCGCCAGGGATTCGATGGTAATGGTGGTGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTCGCCGGGGGTTCGATGGTAATGGTGGAGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTTGCCGGAGATTCGATGGTAATGGTGGAGGCGGAAAATGAAGAACCAGAACCAACAACAGCAGCCATTATAGAAGATAAGGAGGTTTTCGCGGGGGATTCGGTGGTAATGATGGAGGTGGCAAATGAAGAACCAGAACCAACAACCGCAGCCATTGTAGAAGATAAGGAGGTTTTCGCCGGGGATTCGGTGGTAATGATGGAGGCGACAAATGAAGGAACAGAAGCAACAAGAAGAGACATTATAGAAGATAAGGAAGTTTTTGTGGGGGATTCGTTGATAATGATGGAGGCAGCAAAGGAAGAAGCAGAGCCAACAACAACAGCCATTACAGAAGATTAAGATAGTAGCTAGCTTACCACCATTCCATTCATTGTCTCTAGCTTACCACCATTCATTTCTTCTAACCTTCCATTACTTGTAAAGAATCTCTTTTGTTTTGGGAAGAAATTTTGGTTGCCTTTTGTTCAACATTTCAACTGGATCCTTCATTCCCTACTTTGTTTCCTACTAGTTAACCTCCCTATCCAGGTTTGGATGCTGAACGAATGCTGAACGAAGGGCACGCGTCAATCATGTAAGTCACCCCACTGAATTTAGGTAGGATTTGATTGAGATGCATGCATGCTAGAATATTTATCTTTGGTAGTTAGTTTTACCAAAGGTATATAATGCTAGTATGTTTTATGTTTTA

Coding sequence (CDS)

ATGGTAGAAGAGGAAAGAACTGAAGCAGGCTGGGATAGCAAGAAGGAGTTGACCATGACATCGACTTCTTCTGCTGGGGGGAAGCAACTGGCCGTGGTTGAAGCTCCTTCTAACTGTGTTCCATACCCGCCACCGCAAACGACGTATGAGGATCTCATAGCCGATCCCAAGCTCTTTATGGCGTCCTTGGAAAAGCTCCATTCTATTATGGGAACCAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTGGACCTGCATCGGCTTTTCGTGGAGGTCACTGCTCGTGGTGGCCTTGAGAAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTCAAATTTCCTTCGACAGCCACCAATGCATCTTTTGTGCTGAGGAAGTATTATCTCTCATTAATTCATCATTTTGAACAGATTTACTTCTTTAAAGCCGTGGGATGGACACCAAAAGTTTCTGATTCCTCTCCAACCCCAAGTGCAGTGCCAATTCCGACACAAGGGACGATGACCTCTATGTTGCCGCCATCCAATCGGCCAGCACCCCAGCAGCAGCCGCAGACTACTGCAACCGAACTTCCAGCAGTTGCTCCGAGTTCGGTACCACCAGCGGGAGGGTTTCCGGTGGTTGGAGTCATTGATGGAAAATTTGAAAGCGGATATCTCGTTACTGTTACTGTAGGAAATGAGAAGCTAAAAGGTGTGCTTTATATGACTCCTCCAGAGCAACCTGCTCAACAAGTGTTCCAGCCTGGTAGTGTTTTCACCAAAGATGGTACTACCTCCACTACACCAAATGCTCAGCGCCGTCGCCGGAGGAAGAAATCCGAGATCAAACGAAGGGATCCAGCTCATCCAAAGCCGAATAGAAGTGGCTACAATTTCTTCTTCGCCGAGCAGCATGCTAGACTCAAACCATTACATCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGAGCTTTGGAATAAACTTAATGAGTCTGAAAAAACAGTTTATCAGGAGAAAGCTATGAAAGATAAAGAACGATACAGAATTGAGATGGAGAATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTCATGCAGTGCCATTACAGCAGCTTCTTCCTGGGACAGACCTGAATATGGTCTATGCTGCTGACAAAAACGAAGAAACCGAGGGTGGCGAACATCCTCATATGCCGTATAATGATACAATTTATGTTGAAGATAAGGAGGAGGAGGAAGAAGAGGAAGAGGACGAGGACGACGATGAGGAAGAAGGTGCAGCAGCACCTCAAGGAGTTGGCAATGTGGATGTTAACGTCTTGGCTGAGGAGGAACGCTGCGAGACTAGACCAGAACCAACAACAACAGCCATTATACAAGAGAGTAGCACGGTCAAGGACGATAAGGAAGTTTTCGCCGGGCATTCAGTGGTAATGGTGGATGTGGCAAATGAAGAACCAGAACCAGAACCAACAGCAACAGCCATTGTAGAAGATAAGGAAGTTTTCGCCAGGGATTCGATGGTAATGGTGGTGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTCGCCGGGGGTTCGATGGTAATGGTGGAGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTTGCCGGAGATTCGATGGTAATGGTGGAGGCGGAAAATGAAGAACCAGAACCAACAACAGCAGCCATTATAGAAGATAAGGAGGTTTTCGCGGGGGATTCGGTGGTAATGATGGAGGTGGCAAATGAAGAACCAGAACCAACAACCGCAGCCATTGTAGAAGATAAGGAGGTTTTCGCCGGGGATTCGGTGGTAATGATGGAGGCGACAAATGAAGGAACAGAAGCAACAAGAAGAGACATTATAGAAGATAAGGAAGTTTTTGTGGGGGATTCGTTGATAATGATGGAGGCAGCAAAGGAAGAAGCAGAGCCAACAACAACAGCCATTACAGAAGATTAA

Protein sequence

MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRTGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDEDDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVMVDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVMVEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMMEVANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAAKEEAEPTTTAITED

Homology

[Close]

BLAST of Cp4.1LG17g03310 vs. ExPASy Swiss-Prot
Match: Q9MAT6 (High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.5e-103
Identity = 228/438 (52.05%), Postives = 287/438 (65.53%), Query Frame = 0


Query: 45  PQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIR 104
           P+ TYE ++ADP+LFM SLE+LHS++GTKFM+PIIGG++LDLH+LFVEVT+RGG+ K++ 
Sbjct: 21  PEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILN 80

Query: 105 ERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAV 164
           ERRWKEVT+ F FP TATNAS+VLRKYY SL++++EQIYFF++ G  P   DS  +PSA 
Sbjct: 81  ERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIP--PDSMQSPSAR 140

Query: 165 PIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSV--PPAGGFPVVGVIDGKFESG 224
           P   QG +        RP+ Q+    T T  P +  +        G  VVGVIDGKFESG
Sbjct: 141 PCFIQGAI--------RPS-QELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESG 200

Query: 225 YLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPNAQ--------RRRR 284
           YLVTVT+G+E+LKGVLY   P+          S      T + + N Q        RRRR
Sbjct: 201 YLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRR 260

Query: 285 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNESEKT 344
           RKKSEIKRRDP HPKPNRSGYNFFFAEQHARLKPLHPGKDR+ISRMIGELWNKLNE EK 
Sbjct: 261 RKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKL 320

Query: 345 VYQEKAMKDKERYRIEMENYREKLRTGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGG 404
           +YQ KAM+DKERYR EME+YREK + GQ+IS+AVPLQQ LP  +++M  A    +E E  
Sbjct: 321 IYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEADLPIDEVEED 380

Query: 405 EHPHMPYNDTIYVEDKEEEEEEEEDEDDDE-EEGAAAPQGVGNVDVNVLAEEERCETRPE 464
           +       D+     + E  +++  E D E EE +  P G      N+          P+
Sbjct: 381 DEE----GDSSGSSGESEPHDDQSIETDPELEEPSLNPSG-----PNLNPNPTEIVVAPK 438

Query: 465 PTTTAIIQESSTVKDDKE 472
                ++ E+S +K   E
Sbjct: 441 EKNGDVVMETSPLKKADE 438

[Close]

BLAST of Cp4.1LG17g03310 vs. ExPASy Swiss-Prot
Match: Q9SGS2 (High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.7e-65
Identity = 144/326 (44.17%), Postives = 199/326 (61.04%), Query Frame = 0


Query: 35  APSNCVPYPPPQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVT 94
           +P+    YP P   +E ++ D  +F  +L + HSIM TKFMIP+IGGKELDLH L+VEVT
Sbjct: 20  SPAKIKEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVT 79

Query: 95  ARGGLEKVIRERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKV 154
            RGG EKV+ E++W+EV  VF+F +T T+ASFVLRK+YL+L+ H+EQ++ F A G  P +
Sbjct: 80  RRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARG--PLL 139

Query: 155 SDSSPTPSAVPIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGV 214
              +   +      +  +    PPS R           T  P+   SS      F  +G 
Sbjct: 140 HPIATFHANPSTSKEMALVEYTPPSIR--------YHNTHPPSQGSSS------FTAIGT 199

Query: 215 IDGKFESGYLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRR 274
           I+GKF+ GYLV V +G+E L GVLY +    P+     P +V             +RRR 
Sbjct: 200 IEGKFDCGYLVKVKLGSEILNGVLYHSAQPGPSS---SPTAVLNNAVVPYVETGRRRRRL 259

Query: 275 RKKSEIKRR-DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNESEK 334
            K+   +RR DP +PKPNRSGYNFFFAE+H +LK L+P K+RE +++IGE W+ L+  E+
Sbjct: 260 GKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEER 319

Query: 335 TVYQEKAMKDKERYRIEMENYREKLR 360
            VYQ+  +KDKERY+ E+  YRE LR
Sbjct: 320 MVYQDIGLKDKERYQRELNEYRETLR 326

[Close]

BLAST of Cp4.1LG17g03310 vs. ExPASy Swiss-Prot
Match: Q9LTT3 (High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.4e-58
Identity = 130/319 (40.75%), Postives = 182/319 (57.05%), Query Frame = 0


Query: 49  YEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRW 108
           Y+DL+ +  LF   L     +      +P +GG  LDLHRLF+EVT+RGG+E+V+++R+W
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 109 KEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPT 168
           KEV   F FP+T T+ASFVLRKYYL  +   E +Y+ +                      
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK--------------------- 155

Query: 169 QGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVT 228
                   P S+  +  +  ++ A E P        P  G+ V G IDGKF+SGYLVT+ 
Sbjct: 156 --------PVSSLQSTDEALKSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMK 215

Query: 229 VGNEKLKGVLYMTP--PEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPA 288
           +G+++LKGVLY  P  P Q  Q +  P ++            + +RR RKKS++   D  
Sbjct: 216 LGSQELKGVLYHIPQTPSQSQQTMETPSAIV----------QSSQRRHRKKSKLAVVDTQ 275

Query: 289 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKER 348
            PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W+ L ESEK VYQ+K +KD ER
Sbjct: 276 KPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVER 315

Query: 349 YRIEMENYREKLRTGQIIS 366
           YRIEM  Y+    +G   S
Sbjct: 336 YRIEMLEYKSSHESGATAS 315

[Close]

BLAST of Cp4.1LG17g03310 vs. ExPASy Swiss-Prot
Match: Q9LG02 (Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMGB11 PE=1 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 6.1e-46
Identity = 121/320 (37.81%), Postives = 175/320 (54.69%), Query Frame = 0


Query: 49  YEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRW 108
           Y+D++ +P+LF   L   H     KF IPI+GGK LDLHRLF EVT+RGGLEKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 109 KEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPT 168
           KEV   F F +T TN++FVLRK YL ++  FE +Y+F+A             P +     
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA-------------PLSTFWEK 149

Query: 169 QGTMTSMLPPS-NRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTV 228
           +  +  ++  S NR    Q+          + P +V       + G+IDGKFESGYL++ 
Sbjct: 150 EKALKLLIEKSANRDKDSQE----------LKPGTV-------ITGIIDGKFESGYLIST 209

Query: 229 TVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAH 288
            VG+EKLKG+LY   PE             TK G          +++ K S+     P  
Sbjct: 210 KVGSEKLKGMLYHISPE-------------TKRG----------KKKAKSSQGDSHKP-- 269

Query: 289 PKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERY 348
           PK  R+GYNFF AEQ  R+K  + G+     +  G +W  L+ES++ VY EK+ +D +RY
Sbjct: 270 PKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRY 294

Query: 349 RIEMENYREKL--RTGQIIS 366
           ++E+  YR  +  R  +I++
Sbjct: 330 KMEILQYRSLMESRVAEIVA 294

[Close]

BLAST of Cp4.1LG17g03310 vs. ExPASy Swiss-Prot
Match: Q68CP9 (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 6.2e-14
Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 59  FMASLEKLHSIMGTKF-MIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKF 118
           F+  L + H   G+ F  IP +GGKELDLH L+  VT  GG  KV  + +W E+   F F
Sbjct: 19  FLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNF 78

Query: 119 PSTATNASFVLRKYYLSLIHHFEQIYFF 146
           P + +NA+F L++YYL  +  +E+++ F
Sbjct: 79  PRSCSNAAFALKQYYLRYLEKYEKVHHF 106

[Close]

BLAST of Cp4.1LG17g03310 vs. NCBI nr
Match: XP_023513695.1 (high mobility group B protein 15-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023513696.1 high mobility group B protein 15-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1287 bits (3330), Expect = 0.0
Identity = 674/674 (100.00%), Postives = 674/674 (100.00%), Query Frame = 0


Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM
Sbjct: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
           ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST
Sbjct: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN
Sbjct: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
           RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM
Sbjct: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240

Query: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300
           TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA
Sbjct: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300

Query: 301 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 360
           EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT
Sbjct: 301 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 360

Query: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE 420
           GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE
Sbjct: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE 420

Query: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM 480
           DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM
Sbjct: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM 480

Query: 481 VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM 540
           VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM
Sbjct: 481 VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM 540

Query: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600
           VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME
Sbjct: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600

Query: 601 VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA 660
           VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA
Sbjct: 601 VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA 660

Query: 661 KEEAEPTTTAITED 674
           KEEAEPTTTAITED
Sbjct: 661 KEEAEPTTTAITED 674

[Close]

BLAST of Cp4.1LG17g03310 vs. NCBI nr
Match: XP_023513694.1 (high mobility group B protein 15-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1287 bits (3330), Expect = 0.0
Identity = 674/674 (100.00%), Postives = 674/674 (100.00%), Query Frame = 0


Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM
Sbjct: 35  MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 94

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
           ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST
Sbjct: 95  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 154

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN
Sbjct: 155 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 214

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
           RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM
Sbjct: 215 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 274

Query: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300
           TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA
Sbjct: 275 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 334

Query: 301 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 360
           EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT
Sbjct: 335 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 394

Query: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE 420
           GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE
Sbjct: 395 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE 454

Query: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM 480
           DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM
Sbjct: 455 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM 514

Query: 481 VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM 540
           VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM
Sbjct: 515 VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM 574

Query: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600
           VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME
Sbjct: 575 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 634

Query: 601 VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA 660
           VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA
Sbjct: 635 VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA 694

Query: 661 KEEAEPTTTAITED 674
           KEEAEPTTTAITED
Sbjct: 695 KEEAEPTTTAITED 708

[Close]

BLAST of Cp4.1LG17g03310 vs. NCBI nr
Match: XP_022964254.1 (high mobility group B protein 15-like isoform X2 [Cucurbita moschata] >XP_022964255.1 high mobility group B protein 15-like isoform X2 [Cucurbita moschata] >XP_022964256.1 high mobility group B protein 15-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1245 bits (3221), Expect = 0.0
Identity = 659/674 (97.77%), Postives = 662/674 (98.22%), Query Frame = 0


Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM
Sbjct: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
           ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST
Sbjct: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN
Sbjct: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
           RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM
Sbjct: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240

Query: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300
           TPPEQPAQQVFQPGSVFTKDGTTSTTP+AQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA
Sbjct: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300

Query: 301 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 360
           EQHARLKPLHPGKDREISRMIGELWNKLNE+EKTVYQEKAMKDKERYRIEMENYREKLRT
Sbjct: 301 EQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLRT 360

Query: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE 420
           GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGE PHMPYNDTIYVEDKEEEEEEEED 
Sbjct: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYVEDKEEEEEEEED- 420

Query: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM 480
           DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPT TAIIQESSTVKDDKEVFAGH+VVM
Sbjct: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDKEVFAGHAVVM 480

Query: 481 VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM 540
           VDVANEEPEP PTA  IVEDKEVFA DSMVMVVAANEEPQPTATTIIEDKEVFAG SMVM
Sbjct: 481 VDVANEEPEPTPTA--IVEDKEVFAGDSMVMVVAANEEPQPTATTIIEDKEVFAGDSMVM 540

Query: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600
           VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME
Sbjct: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600

Query: 601 VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA 660
           VANEEPE TTAAIVEDKEVFAGDSVVMMEATNEGTEATR DIIEDKEVFVGDSLIMMEAA
Sbjct: 601 VANEEPEATTAAIVEDKEVFAGDSVVMMEATNEGTEATRTDIIEDKEVFVGDSLIMMEAA 660

Query: 661 KEEAEPTTTAITED 674
           KEEAEPT TAI ED
Sbjct: 661 KEEAEPTATAIIED 671

[Close]

BLAST of Cp4.1LG17g03310 vs. NCBI nr
Match: XP_022964253.1 (high mobility group B protein 15-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1245 bits (3221), Expect = 0.0
Identity = 659/674 (97.77%), Postives = 662/674 (98.22%), Query Frame = 0


Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM
Sbjct: 35  MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 94

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
           ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST
Sbjct: 95  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 154

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN
Sbjct: 155 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 214

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
           RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM
Sbjct: 215 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 274

Query: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300
           TPPEQPAQQVFQPGSVFTKDGTTSTTP+AQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA
Sbjct: 275 TPPEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 334

Query: 301 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 360
           EQHARLKPLHPGKDREISRMIGELWNKLNE+EKTVYQEKAMKDKERYRIEMENYREKLRT
Sbjct: 335 EQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLRT 394

Query: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE 420
           GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGE PHMPYNDTIYVEDKEEEEEEEED 
Sbjct: 395 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYVEDKEEEEEEEED- 454

Query: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM 480
           DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPT TAIIQESSTVKDDKEVFAGH+VVM
Sbjct: 455 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDKEVFAGHAVVM 514

Query: 481 VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM 540
           VDVANEEPEP PTA  IVEDKEVFA DSMVMVVAANEEPQPTATTIIEDKEVFAG SMVM
Sbjct: 515 VDVANEEPEPTPTA--IVEDKEVFAGDSMVMVVAANEEPQPTATTIIEDKEVFAGDSMVM 574

Query: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600
           VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME
Sbjct: 575 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 634

Query: 601 VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA 660
           VANEEPE TTAAIVEDKEVFAGDSVVMMEATNEGTEATR DIIEDKEVFVGDSLIMMEAA
Sbjct: 635 VANEEPEATTAAIVEDKEVFAGDSVVMMEATNEGTEATRTDIIEDKEVFVGDSLIMMEAA 694

Query: 661 KEEAEPTTTAITED 674
           KEEAEPT TAI ED
Sbjct: 695 KEEAEPTATAIIED 705

[Close]

BLAST of Cp4.1LG17g03310 vs. NCBI nr
Match: KAG6593783.1 (High mobility group B protein 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1243 bits (3215), Expect = 0.0
Identity = 656/674 (97.33%), Postives = 662/674 (98.22%), Query Frame = 0


Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM
Sbjct: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
           ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST
Sbjct: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN
Sbjct: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
           RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM
Sbjct: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240

Query: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300
           TPPEQPAQQVFQPGSVFTKDGTTSTTP+AQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA
Sbjct: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300

Query: 301 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 360
           EQHARLKPLHPGKDREISRMIGELWNKLNE+EKTVYQEKAMKDKERYRIEMENYREKLRT
Sbjct: 301 EQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLRT 360

Query: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE 420
           GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGE PHMPYNDTIYVEDKEEEEEEEE++
Sbjct: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYVEDKEEEEEEEEED 420

Query: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM 480
           DDDEEEGAAAPQGVGNVDVNVLAEEER ETRPEPT TAIIQESSTVKDDKEVFAGH+VVM
Sbjct: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERRETRPEPTATAIIQESSTVKDDKEVFAGHAVVM 480

Query: 481 VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM 540
           VDVANEEPEP PTA  IVEDKEVFA DSMVMVVAANEEPQPTATTIIEDKEVFAG SMVM
Sbjct: 481 VDVANEEPEPTPTA--IVEDKEVFAGDSMVMVVAANEEPQPTATTIIEDKEVFAGDSMVM 540

Query: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600
           VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME
Sbjct: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600

Query: 601 VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA 660
           VANEEPE TTAAIVEDKEVFAGDSVVMMEATNEGTEATR DI+EDKEVFVGDSLIMMEAA
Sbjct: 601 VANEEPEATTAAIVEDKEVFAGDSVVMMEATNEGTEATRTDILEDKEVFVGDSLIMMEAA 660

Query: 661 KEEAEPTTTAITED 674
           KEEAEPT TAI ED
Sbjct: 661 KEEAEPTATAIIED 672

[Close]

BLAST of Cp4.1LG17g03310 vs. ExPASy TrEMBL
Match: A0A6J1HMM3 (high mobility group B protein 15-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464328 PE=4 SV=1)

HSP 1 Score: 1245 bits (3221), Expect = 0.0
Identity = 659/674 (97.77%), Postives = 662/674 (98.22%), Query Frame = 0


Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM
Sbjct: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
           ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST
Sbjct: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN
Sbjct: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
           RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM
Sbjct: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240

Query: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300
           TPPEQPAQQVFQPGSVFTKDGTTSTTP+AQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA
Sbjct: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300

Query: 301 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 360
           EQHARLKPLHPGKDREISRMIGELWNKLNE+EKTVYQEKAMKDKERYRIEMENYREKLRT
Sbjct: 301 EQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLRT 360

Query: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE 420
           GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGE PHMPYNDTIYVEDKEEEEEEEED 
Sbjct: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYVEDKEEEEEEEED- 420

Query: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM 480
           DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPT TAIIQESSTVKDDKEVFAGH+VVM
Sbjct: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDKEVFAGHAVVM 480

Query: 481 VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM 540
           VDVANEEPEP PTA  IVEDKEVFA DSMVMVVAANEEPQPTATTIIEDKEVFAG SMVM
Sbjct: 481 VDVANEEPEPTPTA--IVEDKEVFAGDSMVMVVAANEEPQPTATTIIEDKEVFAGDSMVM 540

Query: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600
           VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME
Sbjct: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600

Query: 601 VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA 660
           VANEEPE TTAAIVEDKEVFAGDSVVMMEATNEGTEATR DIIEDKEVFVGDSLIMMEAA
Sbjct: 601 VANEEPEATTAAIVEDKEVFAGDSVVMMEATNEGTEATRTDIIEDKEVFVGDSLIMMEAA 660

Query: 661 KEEAEPTTTAITED 674
           KEEAEPT TAI ED
Sbjct: 661 KEEAEPTATAIIED 671

[Close]

BLAST of Cp4.1LG17g03310 vs. ExPASy TrEMBL
Match: A0A6J1HKA1 (high mobility group B protein 15-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464328 PE=4 SV=1)

HSP 1 Score: 1245 bits (3221), Expect = 0.0
Identity = 659/674 (97.77%), Postives = 662/674 (98.22%), Query Frame = 0


Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM
Sbjct: 35  MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 94

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
           ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST
Sbjct: 95  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 154

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN
Sbjct: 155 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 214

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
           RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM
Sbjct: 215 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 274

Query: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300
           TPPEQPAQQVFQPGSVFTKDGTTSTTP+AQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA
Sbjct: 275 TPPEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 334

Query: 301 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 360
           EQHARLKPLHPGKDREISRMIGELWNKLNE+EKTVYQEKAMKDKERYRIEMENYREKLRT
Sbjct: 335 EQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLRT 394

Query: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE 420
           GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGE PHMPYNDTIYVEDKEEEEEEEED 
Sbjct: 395 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYVEDKEEEEEEEED- 454

Query: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM 480
           DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPT TAIIQESSTVKDDKEVFAGH+VVM
Sbjct: 455 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDKEVFAGHAVVM 514

Query: 481 VDVANEEPEPEPTATAIVEDKEVFARDSMVMVVAANEEPQPTATTIIEDKEVFAGGSMVM 540
           VDVANEEPEP PTA  IVEDKEVFA DSMVMVVAANEEPQPTATTIIEDKEVFAG SMVM
Sbjct: 515 VDVANEEPEPTPTA--IVEDKEVFAGDSMVMVVAANEEPQPTATTIIEDKEVFAGDSMVM 574

Query: 541 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 600
           VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME
Sbjct: 575 VEAANEEPQPTATTIIEDKEVFAGDSMVMVEAENEEPEPTTAAIIEDKEVFAGDSVVMME 634

Query: 601 VANEEPEPTTAAIVEDKEVFAGDSVVMMEATNEGTEATRRDIIEDKEVFVGDSLIMMEAA 660
           VANEEPE TTAAIVEDKEVFAGDSVVMMEATNEGTEATR DIIEDKEVFVGDSLIMMEAA
Sbjct: 635 VANEEPEATTAAIVEDKEVFAGDSVVMMEATNEGTEATRTDIIEDKEVFVGDSLIMMEAA 694

Query: 661 KEEAEPTTTAITED 674
           KEEAEPT TAI ED
Sbjct: 695 KEEAEPTATAIIED 705

[Close]

BLAST of Cp4.1LG17g03310 vs. ExPASy TrEMBL
Match: A0A6J1KLF0 (high mobility group B protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC111494342 PE=4 SV=1)

HSP 1 Score: 1186 bits (3068), Expect = 0.0
Identity = 629/696 (90.37%), Postives = 639/696 (91.81%), Query Frame = 0


Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM
Sbjct: 35  MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 94

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
           ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST
Sbjct: 95  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 154

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQG  TSMLPPSN
Sbjct: 155 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGMATSMLPPSN 214

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
           RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM
Sbjct: 215 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 274

Query: 241 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300
           TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA
Sbjct: 275 TPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 334

Query: 301 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 360
           EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT
Sbjct: 335 EQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLRT 394

Query: 361 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEEEEEEEDE 420
           GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGE PHM YNDTIYVEDKEEEEEEEE+E
Sbjct: 395 GQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMQYNDTIYVEDKEEEEEEEEEE 454

Query: 421 DDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDKEVFAGHSVVM 480
           DDDEEEGAAAPQGVGNVDVNVLAEEE CETRPEPT TAIIQESSTVKDDKEVFAGHSVVM
Sbjct: 455 DDDEEEGAAAPQGVGNVDVNVLAEEEHCETRPEPTATAIIQESSTVKDDKEVFAGHSVVM 514

Query: 481 VDVANEEPEP---------------------------EPTATAIVEDKEVFARDSMVMVV 540
           VDVANEEPEP                           EPTATAIVEDKEVFA DSMVMVV
Sbjct: 515 VDVANEEPEPTATAIVEDKEVFAGHSVVMVDVANEEPEPTATAIVEDKEVFAGDSMVMVV 574

Query: 541 AANEEPQPTATTIIEDKEVFAGGSMVMVEAANEEPQPTATTIIEDKEVFAGDSMVMVEAE 600
           AANEEPQPTATTIIEDKEVFAG +MVMVEAANEEPQPTATTIIEDKEVFAGDSMVMVEA 
Sbjct: 575 AANEEPQPTATTIIEDKEVFAGDTMVMVEAANEEPQPTATTIIEDKEVFAGDSMVMVEAA 634

Query: 601 NEEPEPTTAAIIEDKEVFAGDSVVMMEVANEEPEPTTAAIVEDKEVFAGDSVVMMEATNE 660
           NE+P+PT   IIEDKEVFAGDS+VM+E  NEEPEPTTAAI+EDKEVFAGDSVVMME  NE
Sbjct: 635 NEKPQPTATTIIEDKEVFAGDSMVMVEAGNEEPEPTTAAIIEDKEVFAGDSVVMMEVANE 694

Query: 661 GTEATRRDIIEDKEVFVGDSLIMMEAAKEEAEPTTT 669
             E T   I+EDK VF GDS++MMEA  E  E T T
Sbjct: 695 EPEPTTAAIVEDKGVFAGDSVVMMEATNEGTEATRT 730

[Close]

BLAST of Cp4.1LG17g03310 vs. ExPASy TrEMBL
Match: A0A0A0LL59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1)

HSP 1 Score: 704 bits (1816), Expect = 4.73e-248
Identity = 383/513 (74.66%), Postives = 427/513 (83.24%), Query Frame = 0


Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           M+EEERTEAGW S+KELTM STS AGGKQL V+E  SNCVPYPPPQTTYED+IA+ K+FM
Sbjct: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
            +LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVT+RGG+EKVIRERRWKEVTSVF FPST
Sbjct: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYY+SL+HHFEQIYFFKAVGWTP  SDSSP PSA  IPTQG +TSMLPPS+
Sbjct: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQG-VTSMLPPSD 180

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
             A   QPQ+TATELPAV+PSS  P GGFPV+GVIDGKF+SGYLVTVTVG EKLKGVLY 
Sbjct: 181 NQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ 240

Query: 241 TPPEQPAQ-QVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300
            P EQP+Q QV QP   F KDG+T TTPNA RRRRRKKSEIKRRDPAHPKPNRSGYNFFF
Sbjct: 241 AP-EQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300

Query: 301 AEQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKLR 360
           AEQHARLKPL+PGKDREISRMIG+LWNKL ESE+TVYQEKAMKDKERYRIEM +YREKLR
Sbjct: 301 AEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLR 360

Query: 361 TGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVE---------DK 420
           TGQIIS AVPLQQ LP  DLNMVY  DKNEETEGGE    P +DT YVE         +K
Sbjct: 361 TGQIISDAVPLQQRLPEPDLNMVYG-DKNEETEGGE-SQTPDHDTSYVEGDSGEYKTEEK 420

Query: 421 EEEEEEEEDEDDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTTTAIIQESSTVKDDK 480
           EE+EE++E++++D+ E  A+PQG+GNVDVN+L EEE+CETR       + +ESSTV D K
Sbjct: 421 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVEN-VRKESSTVGDKK 480

Query: 481 EVFAGHSVVMVDVANEEPEP---EPTATAIVED 500
           EV AG SV++   A E PEP   EPT  A + +
Sbjct: 481 EVLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRE 508

[Close]

BLAST of Cp4.1LG17g03310 vs. ExPASy TrEMBL
Match: A0A6J1CAX2 (high mobility group B protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009817 PE=4 SV=1)

HSP 1 Score: 681 bits (1756), Expect = 4.67e-239
Identity = 386/510 (75.69%), Postives = 420/510 (82.35%), Query Frame = 0


Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           MVEEERTEAGW S+KELTM STS  GGK L V+E  SNCV YPPPQ TYED+I +PK+FM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
            SLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVT+RGG+EKVIRERRWKEVTSVF FPST
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPS- 180
           ATNASFVLRKYYLSL+HHFEQI+FFKAVGWTP +SDS   PS  PIPTQGT  SM PPS 
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISDSPQCPSPAPIPTQGTP-SMWPPSD 180

Query: 181 NRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLY 240
           N+ A  QQP+T+ TELPAVAPSS   A GFPV+GVIDGKF+SGYLVTVT+G+EKLKGVLY
Sbjct: 181 NQAAMSQQPRTSTTELPAVAPSSAS-AAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLY 240

Query: 241 MTPPEQPAQQ-VFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFF 300
            +PPEQPAQQ V QP  VF KDG TS  PNA RRRRRKKSEIKRRDPAHPKPNRSGYNFF
Sbjct: 241 QSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFF 300

Query: 301 FAEQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYREKL 360
           FAEQHARLKPL+PGKDREISRMIGELWNKLNES++TVYQEKAMKDKERYRIEME+YREKL
Sbjct: 301 FAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKL 360

Query: 361 RTGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGEHPHMPYNDTIYVEDKEEE---EE 420
           RTGQ+IS AVPLQQ LP  DLNMVYA DKNEETEGGE P  P +DT YVE    E   EE
Sbjct: 361 RTGQVISDAVPLQQRLPEPDLNMVYA-DKNEETEGGESPQTPDHDTSYVEGDSGEYKTEE 420

Query: 421 EEEDEDDDEEEGAAAPQGVGNVDVNVLAEEERC-ETRPEPTTTAIIQESSTVK--DDKEV 480
           +EEDE++D EE A+ PQ VGNVDVNVL EEE   ETR       + +ESSTV   D+KEV
Sbjct: 421 KEEDEEEDSEEDAS-PQRVGNVDVNVLVEEEGGGETRA--AEEDVRKESSTVVVGDEKEV 480

Query: 481 FAGHSVVMVDVANEEPEPEPT--ATAIVED 500
           F   S  +++ A EEPEP P    TAI ED
Sbjct: 481 FTRDS--LMEEAKEEPEPPPPPPTTAIRED 502

[Close]

BLAST of Cp4.1LG17g03310 vs. TAIR 10
Match: AT1G04880.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 376.7 bits (966), Expect = 3.9e-104
Identity = 228/438 (52.05%), Postives = 287/438 (65.53%), Query Frame = 0


Query: 45  PQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIR 104
           P+ TYE ++ADP+LFM SLE+LHS++GTKFM+PIIGG++LDLH+LFVEVT+RGG+ K++ 
Sbjct: 21  PEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILN 80

Query: 105 ERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAV 164
           ERRWKEVT+ F FP TATNAS+VLRKYY SL++++EQIYFF++ G  P   DS  +PSA 
Sbjct: 81  ERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIP--PDSMQSPSAR 140

Query: 165 PIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSV--PPAGGFPVVGVIDGKFESG 224
           P   QG +        RP+ Q+    T T  P +  +        G  VVGVIDGKFESG
Sbjct: 141 PCFIQGAI--------RPS-QELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESG 200

Query: 225 YLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPNAQ--------RRRR 284
           YLVTVT+G+E+LKGVLY   P+          S      T + + N Q        RRRR
Sbjct: 201 YLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRR 260

Query: 285 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNESEKT 344
           RKKSEIKRRDP HPKPNRSGYNFFFAEQHARLKPLHPGKDR+ISRMIGELWNKLNE EK 
Sbjct: 261 RKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKL 320

Query: 345 VYQEKAMKDKERYRIEMENYREKLRTGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGG 404
           +YQ KAM+DKERYR EME+YREK + GQ+IS+AVPLQQ LP  +++M  A    +E E  
Sbjct: 321 IYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEADLPIDEVEED 380

Query: 405 EHPHMPYNDTIYVEDKEEEEEEEEDEDDDE-EEGAAAPQGVGNVDVNVLAEEERCETRPE 464
           +       D+     + E  +++  E D E EE +  P G      N+          P+
Sbjct: 381 DEE----GDSSGSSGESEPHDDQSIETDPELEEPSLNPSG-----PNLNPNPTEIVVAPK 438

Query: 465 PTTTAIIQESSTVKDDKE 472
                ++ E+S +K   E
Sbjct: 441 EKNGDVVMETSPLKKADE 438

[Close]

BLAST of Cp4.1LG17g03310 vs. TAIR 10
Match: AT1G76110.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 250.0 bits (637), Expect = 5.5e-66
Identity = 144/326 (44.17%), Postives = 199/326 (61.04%), Query Frame = 0


Query: 35  APSNCVPYPPPQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVT 94
           +P+    YP P   +E ++ D  +F  +L + HSIM TKFMIP+IGGKELDLH L+VEVT
Sbjct: 20  SPAKIKEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVT 79

Query: 95  ARGGLEKVIRERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKV 154
            RGG EKV+ E++W+EV  VF+F +T T+ASFVLRK+YL+L+ H+EQ++ F A G  P +
Sbjct: 80  RRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARG--PLL 139

Query: 155 SDSSPTPSAVPIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGV 214
              +   +      +  +    PPS R           T  P+   SS      F  +G 
Sbjct: 140 HPIATFHANPSTSKEMALVEYTPPSIR--------YHNTHPPSQGSSS------FTAIGT 199

Query: 215 IDGKFESGYLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRR 274
           I+GKF+ GYLV V +G+E L GVLY +    P+     P +V             +RRR 
Sbjct: 200 IEGKFDCGYLVKVKLGSEILNGVLYHSAQPGPSS---SPTAVLNNAVVPYVETGRRRRRL 259

Query: 275 RKKSEIKRR-DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNESEK 334
            K+   +RR DP +PKPNRSGYNFFFAE+H +LK L+P K+RE +++IGE W+ L+  E+
Sbjct: 260 GKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEER 319

Query: 335 TVYQEKAMKDKERYRIEMENYREKLR 360
            VYQ+  +KDKERY+ E+  YRE LR
Sbjct: 320 MVYQDIGLKDKERYQRELNEYRETLR 326

[Close]

BLAST of Cp4.1LG17g03310 vs. TAIR 10
Match: AT3G13350.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 228.4 bits (581), Expect = 1.7e-59
Identity = 130/319 (40.75%), Postives = 182/319 (57.05%), Query Frame = 0


Query: 49  YEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRW 108
           Y+DL+ +  LF   L     +      +P +GG  LDLHRLF+EVT+RGG+E+V+++R+W
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 109 KEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPT 168
           KEV   F FP+T T+ASFVLRKYYL  +   E +Y+ +                      
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK--------------------- 155

Query: 169 QGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVT 228
                   P S+  +  +  ++ A E P        P  G+ V G IDGKF+SGYLVT+ 
Sbjct: 156 --------PVSSLQSTDEALKSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMK 215

Query: 229 VGNEKLKGVLYMTP--PEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPA 288
           +G+++LKGVLY  P  P Q  Q +  P ++            + +RR RKKS++   D  
Sbjct: 216 LGSQELKGVLYHIPQTPSQSQQTMETPSAIV----------QSSQRRHRKKSKLAVVDTQ 275

Query: 289 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKER 348
            PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W+ L ESEK VYQ+K +KD ER
Sbjct: 276 KPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVER 315

Query: 349 YRIEMENYREKLRTGQIIS 366
           YRIEM  Y+    +G   S
Sbjct: 336 YRIEMLEYKSSHESGATAS 315

[Close]

BLAST of Cp4.1LG17g03310 vs. TAIR 10
Match: AT1G55650.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 187.2 bits (474), Expect = 4.4e-47
Identity = 121/320 (37.81%), Postives = 175/320 (54.69%), Query Frame = 0


Query: 49  YEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRW 108
           Y+D++ +P+LF   L   H     KF IPI+GGK LDLHRLF EVT+RGGLEKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 109 KEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPT 168
           KEV   F F +T TN++FVLRK YL ++  FE +Y+F+A             P +     
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA-------------PLSTFWEK 149

Query: 169 QGTMTSMLPPS-NRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTV 228
           +  +  ++  S NR    Q+          + P +V       + G+IDGKFESGYL++ 
Sbjct: 150 EKALKLLIEKSANRDKDSQE----------LKPGTV-------ITGIIDGKFESGYLIST 209

Query: 229 TVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAH 288
            VG+EKLKG+LY   PE             TK G          +++ K S+     P  
Sbjct: 210 KVGSEKLKGMLYHISPE-------------TKRG----------KKKAKSSQGDSHKP-- 269

Query: 289 PKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNESEKTVYQEKAMKDKERY 348
           PK  R+GYNFF AEQ  R+K  + G+     +  G +W  L+ES++ VY EK+ +D +RY
Sbjct: 270 PKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRY 294

Query: 349 RIEMENYREKL--RTGQIIS 366
           ++E+  YR  +  R  +I++
Sbjct: 330 KMEILQYRSLMESRVAEIVA 294

[Close]

BLAST of Cp4.1LG17g03310 vs. TAIR 10
Match: AT3G28730.1 (high mobility group )

HSP 1 Score: 53.5 bits (127), Expect = 7.5e-07
Identity = 31/113 (27.43%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 244 EQPAQQVFQPGSVFTKDGTTSTTPNAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQH 303
           ++P ++      +  K  T +    + +R++ K    K++DP  PK   SG+ FF   + 
Sbjct: 522 KEPKKEASSSKGLPPKRKTVAADEGSSKRKKPK----KKKDPNAPKRAMSGFMFFSQMER 581

Query: 304 ARLKPLHPG-KDREISRMIGELWNKLNESEKTVYQEKAMKDKERYRIEMENYR 356
             +K  HPG    E+ +++G+ W +++  +K  Y+ KA  DK+RY+ E+ +Y+
Sbjct: 582 DNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEISDYK 630

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g03310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAT6	5.5e-103	52.05	High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 ...	[more]
Q9SGS2	7.7e-65	44.17	High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV...	[more]
Q9LTT3	2.4e-58	40.75	High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 ...	[more]
Q9LG02	6.1e-46	37.81	Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMG...	[more]
Q68CP9	6.2e-14	40.91	AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2...	[more]

BLAST of Cp4.1LG17g03310 vs. NCBI nr


Match Name	Identity	Description
XP_023513695.1	100.00	high mobility group B protein 15-like isoform X2 [Cucurbita pepo subsp. pepo] >X...	[more]
XP_023513694.1	100.00	high mobility group B protein 15-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022964254.1	97.77	high mobility group B protein 15-like isoform X2 [Cucurbita moschata] >XP_022964...	[more]
XP_022964253.1	97.77	high mobility group B protein 15-like isoform X1 [Cucurbita moschata]	[more]
KAG6593783.1	97.33	High mobility group B protein 15, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Cp4.1LG17g03310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HMM3	0.0	97.77	high mobility group B protein 15-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1HKA1	0.0	97.77	high mobility group B protein 15-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1KLF0	0.0	90.37	high mobility group B protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC11149434...	[more]
A0A0A0LL59	4.73e-248	74.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1	[more]
A0A6J1CAX2	4.67e-239	75.69	high mobility group B protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of Cp4.1LG17g03310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04880.1	3.9e-104	52.05	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G76110.1	5.5e-66	44.17	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G13350.1	1.7e-59	40.75	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G55650.1	4.4e-47	37.81	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G28730.1	7.5e-07	27.43	high mobility group	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 406..427
None	No IPR available	COILS	Coil	Coil	coord: 337..357
None	No IPR available	SMART	SM01014	ARID_2	coord: 50..140 e-value: 7.0E-30 score: 115.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 409..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 409..437
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..294
None	No IPR available	PANTHER	PTHR46691	HIGH MOBILITY GROUP B PROTEIN 9	coord: 6..422
None	No IPR available	PANTHER	PTHR46691:SF3	HIGH MOBILITY GROUP B PROTEIN 15	coord: 6..422
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 288..352 e-value: 1.34073E-21 score: 86.9129
None	No IPR available	CDD	cd16872	ARID_HMGB9-like	coord: 55..140 e-value: 9.31287E-50 score: 166.286
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 287..356 e-value: 6.5E-20 score: 82.2
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 288..355 e-value: 3.1E-15 score: 56.3
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 288..355 score: 15.941278
IPR001606	ARID DNA-binding domain	SMART	SM00501	bright_3	coord: 54..145 e-value: 9.5E-32 score: 121.5
IPR001606	ARID DNA-binding domain	PFAM	PF01388	ARID	coord: 57..140 e-value: 1.1E-16 score: 61.3
IPR001606	ARID DNA-binding domain	PROSITE	PS51011	ARID	coord: 53..144 score: 25.846561
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 272..367 e-value: 9.0E-22 score: 79.3
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 281..360
IPR036431	ARID DNA-binding domain superfamily	GENE3D	1.10.150.60		coord: 46..148 e-value: 3.2E-26 score: 93.3
IPR036431	ARID DNA-binding domain superfamily	SUPERFAMILY	46774	ARID-like	coord: 49..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g03310.1	Cp4.1LG17g03310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019760	glucosinolate metabolic process
biological_process	GO:0009846	pollen germination
biological_process	GO:0009860	pollen tube growth
cellular_component	GO:0005634	nucleus
cellular_component	GO:0090406	pollen tube
molecular_function	GO:0000400	four-way junction DNA binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding