Cp4.1LG17g03280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACATCGCACACTACGATGGTTTTGGTTTGTGTAGCCAATCAATTTCCTCCACGTCCGTTGTTATCACGAGGTTATGTAAAGCTCATGGAGATCCCGTGTGCTACGAAGTAGAGGATTACTCCTCACTGATTCAGGCGACTATAAAACGGCCCGAGATCTCCGATTTTTCCCACATTCGGCGCTCTCGCTCACTCTAGCCCTAATCTCTCGATTTCGAAGTGGAAATTTCTCTTCTATATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACCGGCAAGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAGTGAGTGATTGTGATTCGAATTCAATTCATTTCGTTCCGATTTCATTTTCTGGGTTTTTTTTTTTTTTTTTTGGAAGAAATTTATGTGAGACGATACTGACGGAATCTGCTCCGAATCGTATTGATTTCAGAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTATGCGGCGGATAAAACGACGGCGTCTGGTAAGAAGAACGTAAGGACGGATACAGTTGCAGTGGCGTGAGTTCCGATGAAGAAATTTTGAGAAAAAGAACGGAAAACAGAGAAAGAAAAGGAAATTCAGATTCAAATGCGAGAGGAAAAGATTTGTGTTCTTCGAACACAGAAACAAAAAAAGAGAGAAAGAAATGGAAATTCAGATTGAGATTTCTTCCTGTGGAGAAGAATCGATTGGCAGAGGTTATACAAAACTGTTCTGCTTCAATCTCTTTACTCAGCTTTCCAATTTTTTGTTTAAATTATAAATAAAAAAAGTTTGAATTTCATATAAATTGTTATATGAACTAGAATCCTAATTTTTTAATTTTAATTTTTAGAGGGATGTAATTTTCTTTTGTTATTTTAAAATACAGGGCACAGATCCATATATATGTATGGTACATTTCGTGTTCCATTTTTGTTCGTTTCGTTTTGTTTTATTTCCTAAAACTGCAAGTACTATGTACTTTGTTATTTAATATTTAAATAAAACTATAGATGTACTGAATATTTAGTTCAGGTTAATTTATGATTAGAAATATTTTCATATTTATTTTTTTTCCTTTTTAAAATCTAAAAAAAAATTGAACTAGATTAGTGTAAGTTGTGCTTTATGTGATTATTACATAGAGCATGGTCCCTTTTTAATTTAATACATACAATCTTGCTTGTGCCGGTAGTGTGACACTTATTCTAATCCAA TACATCGCACACTACGATGGTTTTGGTTTGTGTAGCCAATCAATTTCCTCCACGTCCGTTGTTATCACGAGATCTCCGATTTTTCCCACATTCGGCGCTCTCGCTCACTCTAGCCCTAATCTCTCGATTTCGAAGTGGAAATTTCTCTTCTATATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACCGGCAAGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTATGCGGCGGATAAAACGACGGCGTCTGGTAAGAAGAACGTAAGGACGGATACAGTTGCAGTGGCGTGAGTTCCGATGAAGAAATTTTGAGAAAAAGAACGGAAAACAGAGAAAGAAAAGGAAATTCAGATTCAAATGCGAGAGGAAAAGATTTGTGTTCTTCGAACACAGAAACAAAAAAAGAGAGAAAGAAATGGAAATTCAGATTGAGATTTCTTCCTGTGGAGAAGAATCGATTGGCAGAGGTTATACAAAACTGTTCTGCTTCAATCTCTTTACTCAGCTTTCCAATTTTTTGTTTAAATTATAAATAAAAAAAGTTTGAATTTCATATAAATTGTTATATGAACTAGAATCCTAATTTTTTAATTTTAATTTTTAGAGGGATGTAATTTTCTTTTGTTATTTTAAAATACAGGGCACAGATCCATATATATGTATGGTACATTTCGTGTTCCATTTTTGTTCGTTTCGTTTTGTTTTATTTCCTAAAACTGCAAGTACTATGTACTTTGTTATTTAATATTTAAATAAAACTATAGATGTACTGAATATTTAGTTCAGGTTAATTTATGATTAGAAATATTTTCATATTTATTTTTTTTCCTTTTTAAAATCTAAAAAAAAATTGAACTAGATTAGTGTAAGTTGTGCTTTATGTGATTATTACATAGAGCATGGTCCCTTTTTAATTTAATACATACAATCTTGCTTGTGCCGGTAGTGTGACACTTATTCTAATCCAA TACATCGCACACTACGATGGTTTTGGTTTGTGTAGCCAATCAATTTCCTCCACGTCCGTTGTTATCACGAGATCTCCGATTTTTCCCACATTCGGCGCTCTCGCTCACTCTAGCCCTAATCTCTCGATTTCGAAGTGGAAATTTCTCTTCTATATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACCGGCAAGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTATGCGGCGGATAAAACGACGGCGTCTGGTAAGAAGAACGTAAGGACGGATACAGTTGCAGTGGCGTGA YIAHYDGFGLCSQSISSTSVVITRSPIFPTFGALAHSSPNLSISKWKFLFYMRNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEAQEKSWRMSSSYAADKTTASGKKNVRTDTVAVA Homology
BLAST of Cp4.1LG17g03280 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 9.8e-18 Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.4e-16 Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.1e-16 Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10 Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.9e-09 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. NCBI nr
Match: XP_023514784.1 (uncharacterized protein LOC111778993 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194 bits (494), Expect = 9.36e-62 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. NCBI nr
Match: XP_022964268.1 (uncharacterized protein LOC111464337 [Cucurbita moschata] >KAG6593775.1 FCS-Like Zinc finger 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026107.1 hypothetical protein SDJN02_12606 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 191 bits (485), Expect = 2.20e-60 Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. NCBI nr
Match: XP_023000434.1 (uncharacterized protein LOC111494701 [Cucurbita maxima]) HSP 1 Score: 190 bits (482), Expect = 6.32e-60 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. NCBI nr
Match: XP_038906621.1 (FCS-Like Zinc finger 3-like [Benincasa hispida]) HSP 1 Score: 171 bits (434), Expect = 1.67e-52 Identity = 85/101 (84.16%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. NCBI nr
Match: KGN61405.1 (hypothetical protein Csa_006269 [Cucumis sativus]) HSP 1 Score: 169 bits (427), Expect = 1.66e-51 Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. ExPASy TrEMBL
Match: A0A6J1HKB3 (uncharacterized protein LOC111464337 OS=Cucurbita moschata OX=3662 GN=LOC111464337 PE=3 SV=1) HSP 1 Score: 191 bits (485), Expect = 1.07e-60 Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. ExPASy TrEMBL
Match: A0A6J1KJX8 (uncharacterized protein LOC111494701 OS=Cucurbita maxima OX=3661 GN=LOC111494701 PE=3 SV=1) HSP 1 Score: 190 bits (482), Expect = 3.06e-60 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. ExPASy TrEMBL
Match: A0A0A0LHK0 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G118280 PE=3 SV=1) HSP 1 Score: 169 bits (427), Expect = 8.05e-52 Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. ExPASy TrEMBL
Match: A0A6J1H3Y3 (uncharacterized protein LOC111460275 OS=Cucurbita moschata OX=3662 GN=LOC111460275 PE=3 SV=1) HSP 1 Score: 167 bits (422), Expect = 4.51e-51 Identity = 81/95 (85.26%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. ExPASy TrEMBL
Match: A0A6J1L079 (uncharacterized protein LOC111499186 OS=Cucurbita maxima OX=3661 GN=LOC111499186 PE=3 SV=1) HSP 1 Score: 159 bits (403), Expect = 3.99e-48 Identity = 80/99 (80.81%), Postives = 87/99 (87.88%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 91.3 bits (225), Expect = 6.9e-19 Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 86.7 bits (213), Expect = 1.7e-17 Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 86.3 bits (212), Expect = 2.2e-17 Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11 Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of Cp4.1LG17g03280 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 62.4 bits (150), Expect = 3.5e-10 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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