Cp4.1LG17g02780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g02780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Heat shock protein DnaJ
Location	Cp4.1LG17: 1999183 .. 2001915 (-)
RNA-Seq Expression	Cp4.1LG17g02780
Synteny	Cp4.1LG17g02780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCATTAAAAAAAAAATAATATTATGGTCACAAGGAGCATCGGGAGGGGATTGCAGGCACCGCCACAGACCAAAACGGAGGCTCATTCTCTGGTTGGGGTTTCACCGGAACGGCTAAACTGAACGACGGAGGTCGCCGGGAAGTGCTGGATGGCGGCGAGAACAACGCCGATTGTTCTACCGGCCATTCAATTGAAAGCCACGGACTCAAATGGCGTAATTCCTCCTTCGAACTCAACCTCTTTTCCCCGTCTATCAATTCCAAAGCCTTCTTGGATCGTCAGAACTGAGGTAATTCGCATAGCTAAACTTGAATTCTTGTTGTTTTAGGTCTTCGAGATTAGGCTGCGGAATGCGAGAATCATTTTGTTCCATTTGGCCGGCATTATTCGCTTTTGTTACTAAACCATTTCGATTGAAAATCTTGTTGTTGTAATCTTTCGTTTATCTCATTTCCTGAACTCTCTATTGAAGAGTGTGTGTGTGCGTGTGTGTGTAATAAATCTCTGAAACTGCATAGATTCAAAGCCGTTTTTGTTCTCTGCTCTTGAATTTTCTTAAGGTTTAGCTTATCTTAATGTATGAAGGTTTCTTATTTCAACTTGACATATTTTAACTCTTTTTTGGATCCTTCCTCTACATGGGACAATGATTATAGCTCTTAATTGAAGTTAGGGTGTATTTTCAGCAGAAAAGTACCTAAAATTGTGCTTCTGTTTAGTCTATTGATGAGGAAAATGGCTGTACCTGCTGTTTGATTGGGGTCTGATAGAACAATCTGTGACTAACTTACCAAATACTATTTCAGATTAAAGGTCTACAAGGGAATATATATATTATTGATTGTAACTTCAATTGTAGTTTCATTATTCATTTATGAATTGTTTGTTTTGAAGACAGTTGAATCTACATAGATCCTAGTTTATTCAATGCAAATTTTAAGGTTCTGATCACGATGATACACTCTGCAAGTAATTTTTCTTTTGATATAAATGATTTCCTAGTTGTACTCTGTTGTTTGTGCTTGGTTTTTCTGCATTCCATATAAGAGGGCTGGAAGTGTTTTATTTCTGAATTTTACTTGGAGTGTTATAAAGAAGTACAATGAGAGGGATTTACTAATCGAACCAAGTGACGGTTGAAGAAGAGGTCAAGTGTTGGAGCATGCTTGGGAGTAGCTTTTTCCATTGCTGAAATCACCTCCAACATAGTTATTTTTGGCATTGGTGTGAACATGATTTTGAAAATATCCAAAATCACTTAAAAGGGATTCTCAGTCACGTCAATTGCTTCTTGAGGTTGTTTTGTTGAATAATCGACTAAAAATCACTTTAGAACATAACCATGATTTTTAGTGTTTTGATGAGCCTAAATAACTTTTTAAACCTAACATTAAGTGTGAGATCTCACATCTGTTGGGGAGGAGAACAAAACATTCTTTATAAGAGTGTAGAAACTTCTCTCTAACAAATGCATTTTAAAAACCTTGAGGGGAAGCTCGAAAAGGAAAGTCCAAAGAGGACAATATTTGCTAGTGGTGGGCTTGAGTTGTTACAAATGGTATCAGAGCCAGACACCCGGCAATGTGCTAGTGAGGAGGTTGAGCCCTGAAGGAGGTGGACACCGCCAGCAAGGACGCTGGGATGCAAAGGGGGGGTGGATTGATGGGTCACACATCAATTGGAGAAGGGAACGAATGCCAGCGAGGACACTGGTCTCAAAGGGTCTTGAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAGCATTCTTTGTAAGGGTGTGGAAACCTCTCCCAAGTAGATGCGTCTTAAAAATCTTGAGGGGAAGCCCGAAAGGGAAAGCCTAAAGAGGACAATATCTACTAGCGGTGGGCTTGGGTTGTTACGTTAATCATTCAATTAAGTGTAAAACCAAACATTAATGATTTAACATTAAATGTTTCATACAAAGCCCTTATTTTGTTTTCCTAGTCATCAGGGTAGTGTTTCCTCTTTCATTGCAGTCAAATGTTAGGAGAGAAAAAAGAAAGAAGCCAGATCCACCTTGTGCGATATGCCATGGAAGTGGAAGAGTTGATTGTCACGACTGTTGTGGAAGAGGTTTCTCTCCTCTCTCTCTCTCACACTTTCCATTCCCTCCAAGATGTTATGTTACAGAATTGAATTTATTTGTTCAATCCCTTTAAGTAACATGTTCATATGCTCTCAAACTAGGGAGGACAAATTTTGTTCACCTAGAAATGCTTCCAAAAGGGGAATGGCCAAAATGGTACGACTGTATATGATTTTTTCTCTCAACTGAAAACTTCATAATCGTAATCTCTTTTCACATTACCAAACTTGATATCAAATGAACTCGCCTTTAAATACTGTTGCAGGTGTAGAGCTTGTGGCGGGAGCGGTCTTGGCTATTGCTCTCGTTGCCTCGGGACAGGAGAGTATCGGTATATTATGGGGTTCCAATTCATGAAGATGGAGGACAATGAAAATGAAACTCAGGATGTCATGAAGTATGAAAATCAAACCAACCAACAACATCGAGGTCCCAGAGGCGCAGAGTCTCTTCTACGTGATGAGTCGAGTTCAGAGCCAGAAATTTGAGAGAAGGTACATGGCGTGGTAATGGTAGAACAGCTAGGATACAATTTGACTATACATTTTGGATGGATCATAAAAAGGCAGTCTAATCAGAGGCCAATTTGACATAAGCTTAAAGGGG

mRNA sequence

TGTCATTAAAAAAAAAATAATATTATGGTCACAAGGAGCATCGGGAGGGGATTGCAGGCACCGCCACAGACCAAAACGGAGGCTCATTCTCTGGTTGGGGTTTCACCGGAACGGCTAAACTGAACGACGGAGGTCGCCGGGAAGTGCTGGATGGCGGCGAGAACAACGCCGATTGTTCTACCGGCCATTCAATTGAAAGCCACGGACTCAAATGGCGTAATTCCTCCTTCGAACTCAACCTCTTTTCCCCGTCTATCAATTCCAAAGCCTTCTTGGATCGTCAGAACTGAGTCAAATGTTAGGAGAGAAAAAAGAAAGAAGCCAGATCCACCTTGTGCGATATGCCATGGAAGTGGAAGAGTTGATTGTCACGACTGTTGTGGAAGAGGGAGGACAAATTTTGTTCACCTAGAAATGCTTCCAAAAGGGGAATGGCCAAAATGGTGTAGAGCTTGTGGCGGGAGCGGTCTTGGCTATTGCTCTCGTTGCCTCGGGACAGGAGAGTATCGGTATATTATGGGGTTCCAATTCATGAAGATGGAGGACAATGAAAATGAAACTCAGGATGTCATGAAGTATGAAAATCAAACCAACCAACAACATCGAGGTCCCAGAGGCGCAGAGTCTCTTCTACGTGATGAGTCGAGTTCAGAGCCAGAAATTTGAGAGAAGGTACATGGCGTGGTAATGGTAGAACAGCTAGGATACAATTTGACTATACATTTTGGATGGATCATAAAAAGGCAGTCTAATCAGAGGCCAATTTGACATAAGCTTAAAGGGG

Coding sequence (CDS)

ATGGCGGCGAGAACAACGCCGATTGTTCTACCGGCCATTCAATTGAAAGCCACGGACTCAAATGGCGTAATTCCTCCTTCGAACTCAACCTCTTTTCCCCGTCTATCAATTCCAAAGCCTTCTTGGATCGTCAGAACTGAGTCAAATGTTAGGAGAGAAAAAAGAAAGAAGCCAGATCCACCTTGTGCGATATGCCATGGAAGTGGAAGAGTTGATTGTCACGACTGTTGTGGAAGAGGGAGGACAAATTTTGTTCACCTAGAAATGCTTCCAAAAGGGGAATGGCCAAAATGGTGTAGAGCTTGTGGCGGGAGCGGTCTTGGCTATTGCTCTCGTTGCCTCGGGACAGGAGAGTATCGGTATATTATGGGGTTCCAATTCATGAAGATGGAGGACAATGAAAATGAAACTCAGGATGTCATGAAGTATGAAAATCAAACCAACCAACAACATCGAGGTCCCAGAGGCGCAGAGTCTCTTCTACGTGATGAGTCGAGTTCAGAGCCAGAAATTTGA

Protein sequence

MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDPPCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYRYIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSSEPEI

Homology

[Close]

BLAST of Cp4.1LG17g02780 vs. ExPASy Swiss-Prot
Match: A0A2K3DZC4 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05
Identity = 28/80 (35.00%), Postives = 37/80 (46.25%), Query Frame = 0


Query: 56  KKPDPPCAICHGSGRVDCHDCCGRGRTNFVHLEML----------------PKGEW--PK 115
           KK   PC++C G+G + C  C G GR   V  + L                P G    P+
Sbjct: 72  KKDPVPCSLCQGTGGIRCFACGGDGRNATVSRDDLYDSKALGGGVAPPKRDPLGRTINPR 131

Query: 116 WCRACGGSGLGYCSRCLGTG 118
            C+ C G+GL  CS+C GTG
Sbjct: 132 DCKVCRGAGLVLCSQCKGTG 151

[Close]

BLAST of Cp4.1LG17g02780 vs. NCBI nr
Match: XP_023513705.1 (uncharacterized protein LOC111778233 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367 bits (941), Expect = 2.60e-128
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120
           PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSSEPEI 171
           YIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSSEPEI
Sbjct: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSSEPEI 171

[Close]

BLAST of Cp4.1LG17g02780 vs. NCBI nr
Match: KAG6593729.1 (hypothetical protein SDJN03_13205, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026068.1 hypothetical protein SDJN02_12566 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358 bits (918), Expect = 8.40e-125
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPIVLPAIQLKATDSNGVIPPSN+TSFPRLSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNATSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120
           PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSSEPEI 171
           YIMGFQFMKMED+ENETQDVMKYENQTNQQ RGP GAESLLRDESSSEPEI
Sbjct: 121 YIMGFQFMKMEDSENETQDVMKYENQTNQQRRGPGGAESLLRDESSSEPEI 171

[Close]

BLAST of Cp4.1LG17g02780 vs. NCBI nr
Match: XP_022964367.1 (uncharacterized protein LOC111464401 [Cucurbita moschata])

HSP 1 Score: 355 bits (912), Expect = 6.91e-124
Identity = 166/171 (97.08%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPIVLPA+QLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIVLPAVQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120
           PCAICHGSGRVDCHDCCGRGRTN VHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCAICHGSGRVDCHDCCGRGRTNSVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSSEPEI 171
           YIMGFQFMKMEDNENETQDVMKYENQTNQQ RGP GAESLL DESSSEPEI
Sbjct: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQRRGPGGAESLLHDESSSEPEI 171

[Close]

BLAST of Cp4.1LG17g02780 vs. NCBI nr
Match: XP_023000218.1 (uncharacterized protein LOC111494509 [Cucurbita maxima])

HSP 1 Score: 350 bits (899), Expect = 6.64e-122
Identity = 164/171 (95.91%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAA TT IVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAASTTQIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120
           PCAICHGSGRVDCH+CCGRGRTNFVHLEMLPKGEWPKWCR CGGSGLGYCSRCLGTG+YR
Sbjct: 61  PCAICHGSGRVDCHNCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGDYR 120

Query: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSSEPEI 171
           YIMGFQFMKMEDNENETQDVMKYENQTNQQ RGPRGAESLL DESSSEPEI
Sbjct: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQCRGPRGAESLLHDESSSEPEI 171

[Close]

BLAST of Cp4.1LG17g02780 vs. NCBI nr
Match: XP_038906930.1 (uncharacterized protein LOC120092800 [Benincasa hispida])

HSP 1 Score: 293 bits (751), Expect = 1.73e-99
Identity = 138/166 (83.13%), Postives = 146/166 (87.95%), Query Frame = 0


Query: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAA TTPIVLPA+QLKATDSNGV PP NST  PRLSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAAGTTPIVLPAVQLKATDSNGVTPPRNSTPLPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120
           PC IC+GSGRVDCH CCGRGRTNFVHLEMLPKG+WP+WCR CGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGKWPRWCRTCGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESS 166
           YIMGFQFMKME+NE  TQD+ KYE+Q  Q    PR A+SLL DE S
Sbjct: 121 YIMGFQFMKMENNE--TQDLKKYEDQVKQH---PRSADSLLNDEES 161

[Close]

BLAST of Cp4.1LG17g02780 vs. ExPASy TrEMBL
Match: A0A6J1HHM2 (uncharacterized protein LOC111464401 OS=Cucurbita moschata OX=3662 GN=LOC111464401 PE=4 SV=1)

HSP 1 Score: 355 bits (912), Expect = 3.34e-124
Identity = 166/171 (97.08%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPIVLPA+QLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIVLPAVQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120
           PCAICHGSGRVDCHDCCGRGRTN VHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCAICHGSGRVDCHDCCGRGRTNSVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSSEPEI 171
           YIMGFQFMKMEDNENETQDVMKYENQTNQQ RGP GAESLL DESSSEPEI
Sbjct: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQRRGPGGAESLLHDESSSEPEI 171

[Close]

BLAST of Cp4.1LG17g02780 vs. ExPASy TrEMBL
Match: A0A6J1KM14 (uncharacterized protein LOC111494509 OS=Cucurbita maxima OX=3661 GN=LOC111494509 PE=4 SV=1)

HSP 1 Score: 350 bits (899), Expect = 3.21e-122
Identity = 164/171 (95.91%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAA TT IVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAASTTQIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120
           PCAICHGSGRVDCH+CCGRGRTNFVHLEMLPKGEWPKWCR CGGSGLGYCSRCLGTG+YR
Sbjct: 61  PCAICHGSGRVDCHNCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGDYR 120

Query: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSSEPEI 171
           YIMGFQFMKMEDNENETQDVMKYENQTNQQ RGPRGAESLL DESSSEPEI
Sbjct: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQCRGPRGAESLLHDESSSEPEI 171

[Close]

BLAST of Cp4.1LG17g02780 vs. ExPASy TrEMBL
Match: A0A1S3CCX7 (uncharacterized protein LOC103498991 OS=Cucumis melo OX=3656 GN=LOC103498991 PE=4 SV=1)

HSP 1 Score: 281 bits (718), Expect = 7.58e-95
Identity = 130/153 (84.97%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPI+LPA+QLKATDSNGV P  NST  PRLSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIILPAVQLKATDSNGVTPSRNSTYLPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120
           PC IC+GSGRVDCH CCGRGRTNFVHLEMLPKGEWPKWCR CGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRG 153
           YIMGFQFMKME+NE  ++D  KY +QT +QH G
Sbjct: 121 YIMGFQFMKMENNE--SKDPKKYNDQT-KQHPG 150

[Close]

BLAST of Cp4.1LG17g02780 vs. ExPASy TrEMBL
Match: A0A5D3DLS3 (Protein SPA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00800 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 1.53e-94
Identity = 130/153 (84.97%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPI+L A+QLKATDSNGV P  NSTS PRLSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIILLAVQLKATDSNGVTPSRNSTSLPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120
           PC IC+GSGRVDCH CCGRGRTNFVHLEMLPKGEWPKWCR CGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRG 153
           YIMGFQFMKME+NE  ++D  KY++QT +QH G
Sbjct: 121 YIMGFQFMKMENNE--SKDPKKYDDQT-KQHPG 150

[Close]

BLAST of Cp4.1LG17g02780 vs. ExPASy TrEMBL
Match: A0A6J1DNB8 (uncharacterized protein LOC111022804 OS=Momordica charantia OX=3673 GN=LOC111022804 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 1.71e-93
Identity = 138/170 (81.18%), Postives = 145/170 (85.29%), Query Frame = 0


Query: 1   MAARTTPIVLPAI-QLKATDSNGVIPPS--NSTSFPRLSIPKPSWIVRTESNVRREKRKK 60
           MAAR  PIVL A+ QLKATDSNGV PP   NST FPRLSIPKPSWIV+TESNVRREKRKK
Sbjct: 1   MAARA-PIVLAAVVQLKATDSNGVTPPPPRNSTPFPRLSIPKPSWIVKTESNVRREKRKK 60

Query: 61  PDPPCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTG 120
           PDPPC  C+GSGRVDCH CCGRGRTNFVHLEMLPKGEWPKWCR CGGSGLGYCSRCLGTG
Sbjct: 61  PDPPCVKCNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTG 120

Query: 121 EYRYIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSS 167
           EYRYIMGFQFMKME+NE  T+D+ K ENQ NQQH   R A+SLL DE  S
Sbjct: 121 EYRYIMGFQFMKMENNE--TEDLKKNENQANQQHH--RSADSLLNDEELS 165

[Close]

BLAST of Cp4.1LG17g02780 vs. TAIR 10
Match: AT3G17668.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 2.5e-39
Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 24  IPPSNST-SFPRLSIPKPSWIVRTESNVRREKRKKPDPPCAICHGSGRVDCHDCCGRGRT 83
           +P S ST    RL + KPSWIVRT+S  +   + K    C ICHGSGRVDC +CCG+GRT
Sbjct: 21  VPNSKSTQGKTRLYLTKPSWIVRTQSGAKTCMKSKAKGRCVICHGSGRVDCFNCCGKGRT 80

Query: 84  NFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYRYIMGFQFMKMEDN 134
           N V +EMLP+GEWPKWC++CGGSGL  CSRCLGTGEYRYIMGF+F+   D+
Sbjct: 81  NCVDVEMLPRGEWPKWCKSCGGSGLSDCSRCLGTGEYRYIMGFRFLNQNDD 131

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g02780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A2K3DZC4	1.7e-05	35.00	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Chlamydomonas reinhardtii OX...	[more]

BLAST of Cp4.1LG17g02780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513705.1	2.60e-128	100.00	uncharacterized protein LOC111778233 [Cucurbita pepo subsp. pepo]	[more]
KAG6593729.1	8.40e-125	97.66	hypothetical protein SDJN03_13205, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022964367.1	6.91e-124	97.08	uncharacterized protein LOC111464401 [Cucurbita moschata]	[more]
XP_023000218.1	6.64e-122	95.91	uncharacterized protein LOC111494509 [Cucurbita maxima]	[more]
XP_038906930.1	1.73e-99	83.13	uncharacterized protein LOC120092800 [Benincasa hispida]	[more]

BLAST of Cp4.1LG17g02780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHM2	3.34e-124	97.08	uncharacterized protein LOC111464401 OS=Cucurbita moschata OX=3662 GN=LOC1114644...	[more]
A0A6J1KM14	3.21e-122	95.91	uncharacterized protein LOC111494509 OS=Cucurbita maxima OX=3661 GN=LOC111494509...	[more]
A0A1S3CCX7	7.58e-95	84.97	uncharacterized protein LOC103498991 OS=Cucumis melo OX=3656 GN=LOC103498991 PE=...	[more]
A0A5D3DLS3	1.53e-94	84.97	Protein SPA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00800 PE...	[more]
A0A6J1DNB8	1.71e-93	81.18	uncharacterized protein LOC111022804 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Cp4.1LG17g02780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17668.1	2.5e-39	63.06	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..171
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 29..132
None	No IPR available	PANTHER	PTHR15852:SF54	OSJNBA0086O06.7 PROTEIN	coord: 29..132
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 61..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g02780.1	Cp4.1LG17g02780.1	mRNA