Cp4.1LG17g02690 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g02690
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	UBA domain-containing protein
Location	Cp4.1LG17: 2068622 .. 2076756 (+)
RNA-Seq Expression	Cp4.1LG17g02690
Synteny	Cp4.1LG17g02690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATTTACCCAAAACGAATGGAAAATGCAATTACGAAGTTGGATGAGTTAGCGGGCGGTGCAGTTTACGGCAAGTATCAAAATTCAGTTCTCAGCCAATTTTTTCGCATTTTCTTTGGGACAAGCAACCGAAAAATCACACGGATCGAGAGGTAGGAGGAACAATCCGCCGATTTGCAGCATCAATTTCGATTCGAATTCTGTAATTCAAATCGAACAATTTGGCATCAATGGCTGGCCTATCGCTTAAGTGCGGGGATTGTGGCGCTCTTTTGAGATCCGTAGAAGAAGCTCAAGAACACGCTGAACTCACTTCTCATTCCAACTTCTCTGAGTCCACTGAAGCTGTTCTCAATCTCATCTGCACTGCTTGCGGCAAGCCCTGCCGATCCAAGACGGTATGAATTCCGAGGCAGTTTCTTTGGATTTTATATCTAATTCATTTGCGTGCTTTGCTGGAATCTGTAATTGTGTTTAGTAGAACCACGTATTTTGAATCTTTTGTGGTGTTTGGTGGAGTAGGAAAGTGATTTGCACACGAAAAGGACTGGCCACACTGAGTTTACTGATAAGACTTTGGAGGCTGCAAAACCAATAAGCTTGGAGGCCCCGAAGGTAGCTGCGGAGTCAGAAGATGGTGGGGATGCAAGTGCTAGCAAGTCTGAAGGTATAGAACAAGTCTTGCTATAATCAGTTCTTTAACTTTGCATTCATCAATGAATTGTGTGTTTGATGTTAAAGAAAGAACATATTTGCTGAAATGGACCCAGGTCTTGACGATTAATGTCTAAGGTTAAATGGTGTAGAGGTTTGTGGCTGTCTGATGGACATCCATTTTGACAATGCCAGTTCTAGAGTTCAAGTTATAGAGAAAAAACGCCTCAGTTACACTATCTCCAACTTACTATTTCAATGGCAAAAACAGGACAACGAGTCCCAAGGTCACCTTTTCATTCACTGTCTAATGGTATCTCAGAAATTACTTATTTTCTTTGTTCGGTGGACATCCTTTTTAAGACGAAGCTAAGTCCCTGATGTAGGATATTAGGCAACGTAAGTTCTTAGGTTGTAATGTTAAATTGATCTATTCTGTAGTATTTTCCCCTGGTGGGTTCTTGATCACCAACGCTTCTTTCCTTCCTTCCTAGTTCCTGCCATTCACGGACCTAAGAAAGAAGCTCTAAGCCAAAATAATGTAAAACCCAGTGAAAAACACCCTGGGGGTTTATCAATCAAAGGAAGAAACTGAATGTGACCTCACTACCACCATGTTTTATAGGTTTTCATTCACAAGTGTTGCAAGTTAAACGATAAATACGTAAATTGATTTGACTTACCAACCTATGAACTTAGATGCCCAACAGCTTTCATCATTTTTCTTCCCACTTCTCCGGTGCATTTCATTTGATCAATGAAGTTGTCTCTAATATTAAAAAAAAAAAAAAGACACCTTTGTTCACACCACCACCATCATCTCCCTTTCTTCTCTGTACATCTCTCCAATTAATTTATCCCCAGACCTTATACCTTCAAGTCAGTCGGCACCATGCATGAAATTTTTTCTATGAAGCGTTCCTTTTAAATACGATGGTCTATCATTAAAAAGGACATCTGACTAGAAAAAACTAGTGTTGTGCAAGGAGAAATTGGTATGAGAGGCCATGTGTGCAATCAAGCTGCATATTTGTTGTCTTTCTATTGGGTTACTGGTACTTTTTTCCCCTGGAGTGAACTAGTAACGTACTATTATTACTATTATTTCATTTGTATCCAGAAATGGTTGTGCCAGAGGTGAACAAGAGTATATTGGAGGAACTTGAATCTATGGGCTTCGCAACAGCACGAGCAACCCGTGCACTTTATTATTCTGGTGAGATGTTTATAAAGTTGAAATGCAAGTTTCTTTTTATTTTCATTTCAAATTTCCTGTTAAATGATTCAGTATAGCCTAACATAAGAATCTTTTTTTCTATTTGTTGTTGTGGTAATTTAATATGGTCATATACTTGGAGATTTTTGTACAACCCATGCAATATTATTTCTTCAAAACTGGAGTATTGATAGTCAACTTATTGGAACTCTCTAGTAAACTAGTATCTGAGTTCAGTGTTCACAACTTCCACGACTCTTACTGGAATGTTTTGTGGACCTCCTTTTTCAATATTCTTCCAACATAGGTAATACGATTTGGAGTAGCTTTTTGTAACTACTCCATTCAGGGTCTTTTGTATGCTTGTAGTGGGAGCGTGAATCACTGTCACTTTTTTGTTGTTGTCGTCATCATCGTAGTTATGATTGGTTGAGGTGTGCTGATATATTTTTTTTTGGATGATCTGTCTGTATTCTTTAATTTGTATTACTTCATTTTTTTTATTTGTGTTTCATGTCAATCAAATGAAGTTGGGTCAAGCGGTTGTTCAGTGAGATTAGTTGAGTTGTGCATACAAGCTGGCCTAGACACTTATCATTGTCAAAGAAAAGTCCCTAATAAAGTTAAGTTTCTCACGAAAAAGAGAGAATCAATCCGCTCATGTAGAATTAAAAGGATTATGGAGTCAAATTATCTTTCCTGATTGGAAAAATTGTAACCAAAGTGAAGATACTTTATACTTCTATGTTCCTATTACTTCCTTATGGATCTTTGGATTAGAAGCCCACTTTTTTTGAGAGAGATAAAAGTATTTACACGGGCATACAAAAAAACCAGTCCTAAAAGGAGTTTTGGACTAACGAAAAATATGACTCCAATCTAAAAGAACAAGACTAACTGATAATTACAAAACTGTACATGGTAAGTTCTTCTTGAAAAGGGCCTAAGCATGCTCCTCAAAGCATTAATAGTGCTTTATTTTGGTTCTTTTCCCGCCTCATCTCATCCATCAGTTATATAGACCATTTTCATGCATAATATTGGGATATTCAATTTAATATAACTATCATTTCTCTATCTATTAATTAACAAGCATTCGTTTCTCTCATATTAGGAAATGCAAGTCTGGAGGCTGCAGTCAATTGGGTAGTCGAACATGAGAATGATCCAGAGATAGATCAGATGCCTTTGGTATGACATGCTGTTCATATTTTTTTTAATATTTTGTATCTTTGATTTTCTCTTTATGTCTAATTTCCTTTACACATACAAAACAATTATTTTTTTTTTCATAAGAAACTATTCATTGATGTATGAAATTTACAAAAAAGAAAAAAAAAGAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGCCCCAAACCAAAGGATGGGTTCACCATAGAGGTACAATTAGTTTGGTTTGTATTAGGTATCCAAACACAGAAAAAAAAGAAAGAAAAAGAAGAGCTTATCAAACCGATCAAAATCTACCAAACAAATTAAGAAACTTGCAGAATCAACCAATGCTGCTCAAATTGATGAAAAAACCAAATCAAACAAACCATTCTGTTTTTAAGTTATATAAAACTGAACCGACACAATGTAGCCAAGATGTATGACATCCTTTCCATTTTTGTAATCTTCGTTGGCAGGATGTCATACCATCTTTCTTACATATTATATTGTTGTATTCCAAGTAAAAAAAAATCTTGACAGAGACAGTAGGCCAAAAGGACATATGACATCCCTGTGTGCATTTTTAATCATTGCAGGGAATGACACCTGACTTTGTATTTATCTTGCAGGTTCCTAAGGATACAAAGGTCGAGGCTCCCAAGCCTGCTCTTACACCTGAGCAACTGAAAGCAAAACAGCAGGAGCTAAGGTATAGAGTAGGTCACTCAGTGAAATGAAGCAAGTATTGAATAGACAGAAGCATGTTTGTATTACCAAGCTTATTTCGATAAATTCCTCTCTAGTTACTCATCCTGGTTGTGTGTTTATGTTAATTTCTCTGGTTCTCTTGAAACTCAAGCTTTATTTTAATGCTTTAAAAGCAATTTTATTTAATCTCTTTATTTTGCTGAATGTTACTAGAATAAAAATCCTATGGTCATCAAGCTTGTTCTATACCTCTCATCCAGAGAGAACTTTATCCTTTTCACCCTCGAAAATCTCCTCAGTTTTTATATGTTAAATTCAACATTGAGCTAAATTGTTCTGTTCTTTTTTTTCTTTTGGGTTTTCAACTCTACTGTTATTTTTGGGTAAGATTGAATTAATTAAAAATACAAAATAGGGGGAGAATAATATATCTCCCATAATTCAACAAATTTAAAGAGTGACTTCCAATTAGATTGTATTACGTAAGGATTACAATTTTTTTTAACGTCCAAAGGGAGTACAATATCTATTTTCCCCGGATCAAATCTGTTATTTAACTTATTCCTCTGACTGCATAATTGCCAGTTAGCATTGTTTTGTTAGGTGAACGAGCAAACTTTTGGTGATTTTCTTGCTATTCTGTTTCTCATATGGTGAACTATTTTTTAGGGAACGAGCTCGGAAGAAAAAAGAGGAGGAAGAGAAGCTAGCAGAGAGAGAAAGGGAAAAGGTATTTTTGTTACATTCATTTTTTTTTTACAGAAATCTTTCAAGAAATAATTATAATTATGAGGAACATTAGGATGAAGACTTATCGTATTTTCATTCTAAAATTTTTTTGTTGTCATTTCTTTTATTTCTTTCATGTTTGTGTTCTAATTTTAATAATCAAGCTCCTTTTTTCTTTCTTTACTTTGGTGATTGAACTAGAAGTTGGGCCATGGAAAAGTGAAAGTAGTAAAGCTGGGTCTTTTAGCTTTTTAAGGACTGTGACAACTTGAATATATAATATAACGTGTTTTTTTTTTTTTCCAGGAGAGAATTCGAATTGGCAAGGAGCTCTTAGAAGCAAAAAGGATCGAGGAATTAAATGAGAGAAAAAGGTACTTTTTGGGTCTTTGTTACGGTATTTTTAAGATTGATAGAATTGTTCATATCTGTAATTGTTCTTATGATATTGAAAGCATGATTACAGTTTGATAGAATTGTTCATATCTGTAATTGTTCTTGTGATATTGAAAGCATTATTACGATATTGTACTCAAGCTTGTTCCCTTTTTCAACTGCAAAATACCTTTCCCGTTGTAGAATATTGGCCTTGAGGAAAGCTGAAAAAGAAGAAGAGAAAAGAGCCAGAGACAAAATTCGTCAAAAACTTGAAGAGGACAAGGTATTTTGATAGTTCCTGATCCTGGAGTTTTGTTTGATTAATGCAATGAAGCCATGGTTAAGATTTTCATTTTTAATATTCTTTTAAGTGCGTTGTTCTTCTTGAATCAATCTGCATTGATTTCTGACTGTGATTACTTTTCAGATTAATCTAAAATATTTTAAATGCATCGCTGCATGTTTGTTTACGGAAATTATTTTTAGTGTTGTGGTTGTATTTACACCTTTAATTATTTCTTCAGTAACCTCAGCCGTGAAAAGAAGTGATAATTAGACTGCAACCGGTAATTTCAATTATTTAACTAGCGGGGTTGGTCTACTGGTTAAAAGGCAGAGACTAATTTCTTTGGAGTCATGATTTGAAACCTCGGTGGTGAAATCTGTCTCATCAGTGTGTATTATCCTTTTCTAAGTCAAGTCAGCCCAGCTAGGATATTTATATACTGGATTTTCTTAATTCCAAATATAATGAGATTAATTGAGATTTGTTAAGTGAGCATGGATCATGAAAAACTTCCCATTATAATAATGTTTAATAAATAGGACTTCCCGGATAAGCTATGCCGATAAGCTAACAGATTAAAGAACAGAACTTTCCGGAGCAAAAAGATCATTTAATGAAAGCTTAGTTTATAAACTTTCCCCTTCCATTAATGGAAACTTATTCTCTCATAAAAAAAATAATGAATAATATGCAAGAGATATGGCGGTGTTTATGACTATTTAGTATTAAAAGGTTGCTACCAACAGAATGCTCATCATGAAATGAGTTTTAATTTTCTTCACCTTGAAGAACAAAGTTTTATGCAAAAGAAATCCTGATGGTCCAAAAGGAATGCTATTTTGGCTGGTAAAGAGTGAAAATTCTTCATTTTTGTTTTAAATAAACATATTACTGATGTTTTAGTTGTGGGAAATATGATAATAGAATTGAATTTTGTCCTAAAGAAGTTATTTTCCCCAGGCGGAAAGAAGACGGAGACTTGGGTTGCCAGCAGAAGATCCTTCCACTGCGAAACCTCCCGCCCCAGTTGTTGAAGAGAAAAAGGTATTGCCTGCCCTTCCGGATACGGAATCTACTCTTTAACTTCTGAATTGCATAGAGTACCTGTGATTAAATATTAGTTTATCTGAACTGCAGCTCTCGTTGCCGGTTAGACCTGCTTCAAAAGCAGAGCAAATGAGGGAATGTTTGCGATCATTAAAGTCCAATCACAAGGTAAATATATTTGAGATTTCATAAAACCCTCCAACAAAAATAGGAACTCACAAGAACCCACTCAAGTTACAATTACTTGCCTATATGCGCGCACACACACATAGAAGTACAATTACTTATATTATTGGGTATAACTGGAAAAAAAAAATTGAACTTTTACACCCGTTAGAAGTTGTGAACTTAGCCAAGTCAAAGACGTCACTCCTAATTTCTTGAACGTCAATACTGAAATGATAATTTCTATTCATCTTTCGTTTCTCAAGTAAATTCCATTGATTAGAGTGGCCGCTTGGCTTACTGAACTGCTTCTATTGTGGTAGGAGGATGATGCTAAAGTGAAGAGGGCGTTTCAAACCCTTCTAACTTATGTGGGAAACGTGGTGAAAAATCCTGATGAAGAGAAGTTCAGAAAGATTAGACTCAGCAACCAAACTTTCCAGGTAACTGCCCCAATTGGATGATTAATGGGACTGTTGTCCTTTTTTTATATTGATGGCCCTTTTTATGCTTCTCTTTTGCCGCGATTTTTTTCTGGTGAATAACTCTCTAATCCAAAATACTTCATTATATCACATACTTGCAAACCAATTATCTGTTTTCAGCTGGACCCATAATATATAACAAGCAATGAAGCAAGAATGATCTTTCTCCATTGGAATTTATCATTCGACCATTAACATTATGACAGTGAACTTGATTTTGTGATACTTGCTGCCACTCCGTGGCACGATTAGTTATCCTCTTTCTTGTTCATTGTAATTTTTAATCTAGAAATAGTTAAATAACAGATTTGATCCGGAGACTTCGACCTATTGTCTATTTAATCGCAAAATATTAGAAGTTATTATTTCGTACTTGAACTTTGAGATTGTGATTCTATATAGTTCTTCCTGTTAGTACTGTAGACAAAAGTTTGCTTATTTGAACTGAAGTGATATATGGGTTTGAAAAGTAAGTGGTGTGATCTTCATAGAAGGGATTCATTATGTGGGTTTGGAAAGTGTCACATGCTCTAATTATTTAGTCCAGCCATTTTCATTCTGGTTGTATCATATCAAATTAGTAAATGTTTTTTTGTAGTAAAAATTGTCACATCATAGTTAGAAGTTGAGTAATGTATAAGAACTAATTAGACCCAACCATAAAAACTTCAGGATTAAATTGATAAATTTATATATTCTCGAGCACATCGCTTGCAGTCCCGTCCCATTCTTGTTACGTTATAGTGAAACTAAACTGGGATTACTGATTGGATGCAACAGGATAGAGTGGGTGCACTGAGAGGAGGAATCGAGTTTCTAGAGCTGTGTGGGTTTGAGAAAATTGAAGGTGATGAGTTCTTGTTTCTGCCCAGAGACAAAGTTGACAGAGCAGTGCTTAATTCAGCTGGCTCTGAGCTCGACTCTGCAATTAAGAATCCCTTCTTTGGTGTTCTCTAATTTCATGTTACAGATAAATTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATATCATCTTTTCTTTTTTCTTTTGCTGCTGCTGCTGTGGATATGGTCCAGATTATTGTTGAAATTTTGTTATTTGGTGACACTACATGCAAAAATATTTAGGGCATTTACCATTAAATAACAATGTTTTCTCAGTGATCGATGCTTTTTATTTATCCTTTAAAACTTTTGTAATGGTTTCTAAACTTGAATTTGTTTGTTTGGTAAGTTTGTTATTAG

mRNA sequence

TGATTTACCCAAAACGAATGGAAAATGCAATTACGAAGTTGGATGAGTTAGCGGGCGGTGCAGTTTACGGCAAGTATCAAAATTCAGTTCTCAGCCAATTTTTTCGCATTTTCTTTGGGACAAGCAACCGAAAAATCACACGGATCGAGAGGTAGGAGGAACAATCCGCCGATTTGCAGCATCAATTTCGATTCGAATTCTGTAATTCAAATCGAACAATTTGGCATCAATGGCTGGCCTATCGCTTAAGTGCGGGGATTGTGGCGCTCTTTTGAGATCCGTAGAAGAAGCTCAAGAACACGCTGAACTCACTTCTCATTCCAACTTCTCTGAGTCCACTGAAGCTGTTCTCAATCTCATCTGCACTGCTTGCGGCAAGCCCTGCCGATCCAAGACGGAAAGTGATTTGCACACGAAAAGGACTGGCCACACTGAGTTTACTGATAAGACTTTGGAGGCTGCAAAACCAATAAGCTTGGAGGCCCCGAAGGTAGCTGCGGAGTCAGAAGATGGTGGGGATGCAAGTGCTAGCAAGTCTGAAGAAATGGTTGTGCCAGAGGTGAACAAGAGTATATTGGAGGAACTTGAATCTATGGGCTTCGCAACAGCACGAGCAACCCGTGCACTTTATTATTCTGGAAATGCAAGTCTGGAGGCTGCAGTCAATTGGGTAGTCGAACATGAGAATGATCCAGAGATAGATCAGATGCCTTTGGTTCCTAAGGATACAAAGGTCGAGGCTCCCAAGCCTGCTCTTACACCTGAGCAACTGAAAGCAAAACAGCAGGAGCTAAGGGAACGAGCTCGGAAGAAAAAAGAGGAGGAAGAGAAGCTAGCAGAGAGAGAAAGGGAAAAGGAGAGAATTCGAATTGGCAAGGAGCTCTTAGAAGCAAAAAGGATCGAGGAATTAAATGAGAGAAAAAGAATATTGGCCTTGAGGAAAGCTGAAAAAGAAGAAGAGAAAAGAGCCAGAGACAAAATTCGTCAAAAACTTGAAGAGGACAAGGCGGAAAGAAGACGGAGACTTGGGTTGCCAGCAGAAGATCCTTCCACTGCGAAACCTCCCGCCCCAGTTGTTGAAGAGAAAAAGCTCTCGTTGCCGGTTAGACCTGCTTCAAAAGCAGAGCAAATGAGGGAATGTTTGCGATCATTAAAGTCCAATCACAAGGAGGATGATGCTAAAGTGAAGAGGGCGTTTCAAACCCTTCTAACTTATGTGGGAAACGTGGTGAAAAATCCTGATGAAGAGAAGTTCAGAAAGATTAGACTCAGCAACCAAACTTTCCAGGATAGAGTGGGTGCACTGAGAGGAGGAATCGAGTTTCTAGAGCTGTGTGGGTTTGAGAAAATTGAAGGTGATGAGTTCTTGTTTCTGCCCAGAGACAAAGTTGACAGAGCAGTGCTTAATTCAGCTGGCTCTGAGCTCGACTCTGCAATTAAGAATCCCTTCTTTGGTGTTCTCTAATTTCATGTTACAGATAAATTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATATCATCTTTTCTTTTTTCTTTTGCTGCTGCTGCTGTGGATATGGTCCAGATTATTGTTGAAATTTTGTTATTTGGTGACACTACATGCAAAAATATTTAGGGCATTTACCATTAAATAACAATGTTTTCTCAGTGATCGATGCTTTTTATTTATCCTTTAAAACTTTTGTAATGGTTTCTAAACTTGAATTTGTTTGTTTGGTAAGTTTGTTATTAG

Coding sequence (CDS)

ATGGCTGGCCTATCGCTTAAGTGCGGGGATTGTGGCGCTCTTTTGAGATCCGTAGAAGAAGCTCAAGAACACGCTGAACTCACTTCTCATTCCAACTTCTCTGAGTCCACTGAAGCTGTTCTCAATCTCATCTGCACTGCTTGCGGCAAGCCCTGCCGATCCAAGACGGAAAGTGATTTGCACACGAAAAGGACTGGCCACACTGAGTTTACTGATAAGACTTTGGAGGCTGCAAAACCAATAAGCTTGGAGGCCCCGAAGGTAGCTGCGGAGTCAGAAGATGGTGGGGATGCAAGTGCTAGCAAGTCTGAAGAAATGGTTGTGCCAGAGGTGAACAAGAGTATATTGGAGGAACTTGAATCTATGGGCTTCGCAACAGCACGAGCAACCCGTGCACTTTATTATTCTGGAAATGCAAGTCTGGAGGCTGCAGTCAATTGGGTAGTCGAACATGAGAATGATCCAGAGATAGATCAGATGCCTTTGGTTCCTAAGGATACAAAGGTCGAGGCTCCCAAGCCTGCTCTTACACCTGAGCAACTGAAAGCAAAACAGCAGGAGCTAAGGGAACGAGCTCGGAAGAAAAAAGAGGAGGAAGAGAAGCTAGCAGAGAGAGAAAGGGAAAAGGAGAGAATTCGAATTGGCAAGGAGCTCTTAGAAGCAAAAAGGATCGAGGAATTAAATGAGAGAAAAAGAATATTGGCCTTGAGGAAAGCTGAAAAAGAAGAAGAGAAAAGAGCCAGAGACAAAATTCGTCAAAAACTTGAAGAGGACAAGGCGGAAAGAAGACGGAGACTTGGGTTGCCAGCAGAAGATCCTTCCACTGCGAAACCTCCCGCCCCAGTTGTTGAAGAGAAAAAGCTCTCGTTGCCGGTTAGACCTGCTTCAAAAGCAGAGCAAATGAGGGAATGTTTGCGATCATTAAAGTCCAATCACAAGGAGGATGATGCTAAAGTGAAGAGGGCGTTTCAAACCCTTCTAACTTATGTGGGAAACGTGGTGAAAAATCCTGATGAAGAGAAGTTCAGAAAGATTAGACTCAGCAACCAAACTTTCCAGGATAGAGTGGGTGCACTGAGAGGAGGAATCGAGTTTCTAGAGCTGTGTGGGTTTGAGAAAATTGAAGGTGATGAGTTCTTGTTTCTGCCCAGAGACAAAGTTGACAGAGCAGTGCTTAATTCAGCTGGCTCTGAGCTCGACTCTGCAATTAAGAATCCCTTCTTTGGTGTTCTCTAA

Protein sequence

MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDLHTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELESMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQLKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAEKEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQMRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALRGGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL

Homology

[Close]

BLAST of Cp4.1LG17g02690 vs. ExPASy Swiss-Prot
Match: Q6GL77 (UBX domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubxn1 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.1e-13
Identity = 72/204 (35.29%), Postives = 114/204 (55.88%), Query Frame = 0


Query: 114 SILEELESMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQ-MPLVPKDT----- 173
           S LE L  MGF+ +RA +AL  +GN  +E A++W+VEHE+DP+ID+   +VP+D+     
Sbjct: 5   STLESLIEMGFSPSRAEKALAATGNQGIEPAMDWLVEHEDDPDIDEPSVVVPEDSDSGTT 64

Query: 174 --------KVEAPKPALTPEQLKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELL 233
                   +   P      E+   +  EL  + +K++EE EK    E+EK+R + G+EL 
Sbjct: 65  DTQGMDTCEERLPLTEEEKEKQTKRMMELIAQKQKEREEREKRERIEQEKQRRKQGQELS 124

Query: 234 EAKRIEELNERKRILALRKAEKEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPP 293
             K+  +  E ++ +  R+ EK+EEK ARD++R+K+  DKAER RR G    +P    PP
Sbjct: 125 AVKQKIQEQEMQKAVEDRRREKQEEKLARDRVREKIARDKAERARRFGGAGSEP--ISPP 184

Query: 294 APVVEEKKLSLPVRPASKAEQMRE 304
           A      + S+P    S +  ++E
Sbjct: 185 A------EASIPATTPSPSSPVQE 200

[Close]

BLAST of Cp4.1LG17g02690 vs. ExPASy Swiss-Prot
Match: Q04323 (UBX domain-containing protein 1 OS=Homo sapiens OX=9606 GN=UBXN1 PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-11
Identity = 67/202 (33.17%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 116 LEELESMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVP----------- 175
           LE L  MGF   RA +AL  +GN  +EAA++W++EHE+DP++D+    P           
Sbjct: 7   LESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPTS 66

Query: 176 --------KDTKVEAPKPALTPEQLKAKQQELRERARKKKEEEEKLAER---EREKERIR 235
                     +     KPAL+ E+ + + + + E   +K+ E E+  ER   ERE++R R
Sbjct: 67  SEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRR 126

Query: 236 IGKELLEAKRIEELNERKRILALRKAEKEEEKRARDKIRQKLEEDKAERRRRLG--LPAE 294
            G+EL  A++  + +E +R    R+ EK EE  AR ++R+K+E DKAER ++ G  + ++
Sbjct: 127 QGQELSAARQRLQEDEMRRAAEERRREKAEELAARQRVREKIERDKAERAKKYGGSVGSQ 186

[Close]

BLAST of Cp4.1LG17g02690 vs. ExPASy Swiss-Prot
Match: Q32KW2 (UBX domain-containing protein 1 OS=Bos taurus OX=9913 GN=UBXN1 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-11
Identity = 67/202 (33.17%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 116 LEELESMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVP----------- 175
           LE L  MGF   RA +AL  +GN  +EAA++W++EHE+DP++D+    P           
Sbjct: 7   LESLIEMGFPKGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLATPLGHVLGREPTP 66

Query: 176 --------KDTKVEAPKPALTPEQLKAKQQELRERARKKKEEEEKLAER---EREKERIR 235
                     + V   KP LT E+ + + + + E   +K+ E E+  ER   ERE++R R
Sbjct: 67  SEQGGPKGPGSAVGEGKPVLTEEERQEQTKRMLELVAQKQREREEREEREALERERQRRR 126

Query: 236 IGKELLEAKRIEELNERKRILALRKAEKEEEKRARDKIRQKLEEDKAERRRRLG--LPAE 294
            G+EL  A++  + +E +R    R+ EK EE  AR ++R+K+E DKAER ++ G  + ++
Sbjct: 127 QGQELTAARQRLQEDEMRRAAEERRREKAEELEARQRVREKIERDKAERAKKYGGNVGSQ 186

[Close]

BLAST of Cp4.1LG17g02690 vs. ExPASy Swiss-Prot
Match: Q6GLV4 (UBX domain-containing protein 1-B OS=Xenopus laevis OX=8355 GN=ubxn1-b PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.9e-11
Identity = 73/200 (36.50%), Postives = 115/200 (57.50%), Query Frame = 0


Query: 114 SILEELESMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLV-PKDTKVE-- 173
           S LE L  MGF+ +RA +AL  +GN  +E A++W+VEHE+DP+I +  +V P+D+  +  
Sbjct: 5   SALESLIEMGFSPSRAEKALSATGNQGIEPAMDWLVEHEDDPDIKEPSVVIPEDSGTDTT 64

Query: 174 -----------APKPALTPEQLKAKQ----QELRERARKKKEEEEKLAEREREKERIRIG 233
                      A +  LT E+ K KQ     EL  + +K++EE EK    E+EK+R + G
Sbjct: 65  DTTDTQAMDTSAERLPLTEEE-KEKQTKRMMELIAQKQKEREEREKRERIEQEKQRRKHG 124

Query: 234 KELLEAKRIEELNERKRILALRKAEKEEEKRARDKIRQKLEEDKAERRRRLG-------- 286
           +EL   K+  +  E ++    R+ EK+EE+ AR+++R+K+  DKA+R R+ G        
Sbjct: 125 QELSAIKQRMQEQEMQKAAEDRRREKQEERLARERVREKIARDKADRARKFGGAGSEPIS 184

[Close]

BLAST of Cp4.1LG17g02690 vs. ExPASy Swiss-Prot
Match: Q499N6 (UBX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubxn1 PE=3 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 5.1e-11
Identity = 70/202 (34.65%), Postives = 109/202 (53.96%), Query Frame = 0


Query: 116 LEELESMGFATARATRALYYSGNASLEAAVNWVVEHENDPEID---QMPL------VPKD 175
           LE L  MGF   RA +AL  +GN  +EAA++W++EHE+DP++D   + PL       P  
Sbjct: 7   LESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLSHILGREPTP 66

Query: 176 TKVEAP----------KPALTPEQLKAKQQELRERARKKKEEEEKLAER---EREKERIR 235
           ++   P          KP LT E+ + + + + E   +K+ E E+  ER   EREK+R R
Sbjct: 67  SEQVGPEGSGSAAGESKPVLTEEERQEQTKRMLELVAQKQREREEREEREALEREKQRRR 126

Query: 236 IGKELLEAKRIEELNERKRILALRKAEKEEEKRARDKIRQKLEEDKAERRRRLG--LPAE 294
            G+EL  A++  + +E +R    R+ EK EE  AR ++R+K+E DKAER ++ G  + + 
Sbjct: 127 QGQELSAARQKLQEDEIRRAAEERRREKAEELAARQRVREKIERDKAERAQKYGGTVGSR 186

[Close]

BLAST of Cp4.1LG17g02690 vs. NCBI nr
Match: XP_023514926.1 (chromatin assembly factor 1 subunit A [Cucurbita pepo subsp. pepo] >XP_023514927.1 chromatin assembly factor 1 subunit A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 758 bits (1957), Expect = 3.93e-275
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL
Sbjct: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE
Sbjct: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ
Sbjct: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE
Sbjct: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300
           KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ
Sbjct: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300

Query: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360
           MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR
Sbjct: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360

Query: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
           GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL
Sbjct: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411

[Close]

BLAST of Cp4.1LG17g02690 vs. NCBI nr
Match: XP_022964544.1 (chromatin assembly factor 1 subunit A [Cucurbita moschata] >XP_022964545.1 chromatin assembly factor 1 subunit A [Cucurbita moschata] >KAG6593717.1 UBX domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 752 bits (1942), Expect = 7.59e-273
Identity = 407/411 (99.03%), Postives = 410/411 (99.76%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL
Sbjct: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE
Sbjct: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           +MGF TARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ
Sbjct: 121 AMGFPTARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKR+EELNERKRILALRKAE
Sbjct: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRMEELNERKRILALRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300
           KEEEKRAR+KIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ
Sbjct: 241 KEEEKRAREKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300

Query: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360
           MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR
Sbjct: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360

Query: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
           GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL
Sbjct: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411

[Close]

BLAST of Cp4.1LG17g02690 vs. NCBI nr
Match: XP_022999940.1 (chromatin assembly factor 1 subunit A [Cucurbita maxima])

HSP 1 Score: 752 bits (1941), Expect = 1.08e-272
Identity = 407/411 (99.03%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL
Sbjct: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE
Sbjct: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           +MGF TARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ
Sbjct: 121 AMGFPTARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE
Sbjct: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300
           KEEEKRAR+KIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ
Sbjct: 241 KEEEKRAREKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300

Query: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360
           MRECLRSLKSNHKEDD KVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR
Sbjct: 301 MRECLRSLKSNHKEDDVKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360

Query: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
           GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL
Sbjct: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411

[Close]

BLAST of Cp4.1LG17g02690 vs. NCBI nr
Match: KAG7026056.1 (UBX domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 750 bits (1937), Expect = 4.38e-272
Identity = 406/411 (98.78%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL
Sbjct: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASA KSEEMVVPEVNKSILEELE
Sbjct: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASACKSEEMVVPEVNKSILEELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           +MGF TARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ
Sbjct: 121 AMGFPTARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKR+EELNERKRILALRKAE
Sbjct: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRMEELNERKRILALRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300
           KEEEKRAR+KIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ
Sbjct: 241 KEEEKRAREKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300

Query: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360
           MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR
Sbjct: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360

Query: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
           GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL
Sbjct: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411

[Close]

BLAST of Cp4.1LG17g02690 vs. NCBI nr
Match: XP_038874495.1 (chromatin assembly factor 1 subunit A-B [Benincasa hispida])

HSP 1 Score: 729 bits (1881), Expect = 1.49e-263
Identity = 393/411 (95.62%), Postives = 403/411 (98.05%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAGLSLKCGDCGALLRSVEEAQ+HAELTSHSNFSESTEAVLNL+CTACGKPCRSKTESDL
Sbjct: 1   MAGLSLKCGDCGALLRSVEEAQQHAELTSHSNFSESTEAVLNLVCTACGKPCRSKTESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEF DKTLEAAKPISLEAPKV AESED GDASASKSEEMVVPEVNK+ILEELE
Sbjct: 61  HTKRTGHTEFADKTLEAAKPISLEAPKVDAESEDAGDASASKSEEMVVPEVNKNILEELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           +MGF TARATRAL+YSGNASLEAAVNWVVEHENDPEID+MPLVPKDTKVEAPKP+LTPEQ
Sbjct: 121 AMGFPTARATRALFYSGNASLEAAVNWVVEHENDPEIDEMPLVPKDTKVEAPKPSLTPEQ 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           LKAKQQELRERARKKKEEEEK+AEREREKERIRIGKELLEAKRIEE NERKRILALRKAE
Sbjct: 181 LKAKQQELRERARKKKEEEEKIAEREREKERIRIGKELLEAKRIEEENERKRILALRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300
           KEEEKRARDKIRQKLE+DKAERRRRLGLP EDPSTAKPPAPVVEEKKLSLPVRPASKAEQ
Sbjct: 241 KEEEKRARDKIRQKLEDDKAERRRRLGLPPEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300

Query: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360
           MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR
Sbjct: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360

Query: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
           GGIEFLELCGFEKIEG EFLFLPR+KVDRAVLNSAG ELDSAIKNPFFGVL
Sbjct: 361 GGIEFLELCGFEKIEGGEFLFLPRNKVDRAVLNSAGCELDSAIKNPFFGVL 411

[Close]

BLAST of Cp4.1LG17g02690 vs. ExPASy TrEMBL
Match: A0A6J1HNI9 (chromatin assembly factor 1 subunit A OS=Cucurbita moschata OX=3662 GN=LOC111464540 PE=4 SV=1)

HSP 1 Score: 752 bits (1942), Expect = 3.67e-273
Identity = 407/411 (99.03%), Postives = 410/411 (99.76%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL
Sbjct: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE
Sbjct: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           +MGF TARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ
Sbjct: 121 AMGFPTARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKR+EELNERKRILALRKAE
Sbjct: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRMEELNERKRILALRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300
           KEEEKRAR+KIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ
Sbjct: 241 KEEEKRAREKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300

Query: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360
           MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR
Sbjct: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360

Query: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
           GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL
Sbjct: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411

[Close]

BLAST of Cp4.1LG17g02690 vs. ExPASy TrEMBL
Match: A0A6J1KGZ6 (chromatin assembly factor 1 subunit A OS=Cucurbita maxima OX=3661 GN=LOC111494267 PE=4 SV=1)

HSP 1 Score: 752 bits (1941), Expect = 5.22e-273
Identity = 407/411 (99.03%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL
Sbjct: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE
Sbjct: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           +MGF TARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ
Sbjct: 121 AMGFPTARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE
Sbjct: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300
           KEEEKRAR+KIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ
Sbjct: 241 KEEEKRAREKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300

Query: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360
           MRECLRSLKSNHKEDD KVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR
Sbjct: 301 MRECLRSLKSNHKEDDVKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360

Query: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
           GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL
Sbjct: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411

[Close]

BLAST of Cp4.1LG17g02690 vs. ExPASy TrEMBL
Match: A0A0A0LL71 (UBA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G139840 PE=4 SV=1)

HSP 1 Score: 722 bits (1864), Expect = 2.81e-261
Identity = 388/411 (94.40%), Postives = 403/411 (98.05%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAGLSL+CGDCG LL+SVEEAQ+HAELTSHSNFSESTEAVLNL+CTACGKPCRSKTESDL
Sbjct: 1   MAGLSLQCGDCGVLLKSVEEAQQHAELTSHSNFSESTEAVLNLVCTACGKPCRSKTESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEF DKTLEAAKPISLEAPKV AE+EDGGDASASKSEEMVVPEVNK+ILEELE
Sbjct: 61  HTKRTGHTEFADKTLEAAKPISLEAPKVDAEAEDGGDASASKSEEMVVPEVNKNILEELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           +MGF TA+ATRAL+YSGN+SLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKP+LTPEQ
Sbjct: 121 AMGFPTAQATRALFYSGNSSLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPSLTPEQ 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           LKAKQQELRERARKKKEEEEK+ EREREKERIRIGKELLEAKRIEE NERKRILALRKAE
Sbjct: 181 LKAKQQELRERARKKKEEEEKITEREREKERIRIGKELLEAKRIEEENERKRILALRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300
           KEEEKRAR+KIRQKLEEDKAERRRRLGLP EDPSTAKPPAPVVEEKKLSLPVRPASKAEQ
Sbjct: 241 KEEEKRAREKIRQKLEEDKAERRRRLGLPPEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300

Query: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360
           MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVK+PDEEKFRKIRLSNQTFQDRVGALR
Sbjct: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKSPDEEKFRKIRLSNQTFQDRVGALR 360

Query: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
           GGIEFLELCGFEKIEG EFLFLPR+KVDRAVLNSAGSELDSAIKNPFFGVL
Sbjct: 361 GGIEFLELCGFEKIEGGEFLFLPRNKVDRAVLNSAGSELDSAIKNPFFGVL 411

[Close]

BLAST of Cp4.1LG17g02690 vs. ExPASy TrEMBL
Match: A0A1S3C4L3 (chromatin assembly factor 1 subunit A OS=Cucumis melo OX=3656 GN=LOC103496959 PE=4 SV=1)

HSP 1 Score: 720 bits (1858), Expect = 2.31e-260
Identity = 387/411 (94.16%), Postives = 401/411 (97.57%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAGLSL+CGDCGAL +SVEEAQ+HAELTSHSNFSESTEAVLNL+CTACGKPCRSKTESDL
Sbjct: 1   MAGLSLQCGDCGALFKSVEEAQQHAELTSHSNFSESTEAVLNLVCTACGKPCRSKTESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEF DKTLEAAKPISLEA KV  E+EDGGDASASKSEEMVVPEVNK+ILEELE
Sbjct: 61  HTKRTGHTEFADKTLEAAKPISLEARKVDVEAEDGGDASASKSEEMVVPEVNKNILEELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           +MGF TARATRAL+YSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKP+LTPEQ
Sbjct: 121 AMGFPTARATRALFYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPSLTPEQ 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           LKAKQQELRERARKKKEEEEK+AEREREKERIRIGKELLEAKRIEE NERKRILALRKAE
Sbjct: 181 LKAKQQELRERARKKKEEEEKIAEREREKERIRIGKELLEAKRIEEENERKRILALRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300
           KEEEKRAR+KIRQKLEEDKAERRRRLGLP EDPSTAKPPAPVVEEKK+SLPVRPASKAEQ
Sbjct: 241 KEEEKRAREKIRQKLEEDKAERRRRLGLPPEDPSTAKPPAPVVEEKKMSLPVRPASKAEQ 300

Query: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360
           MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVG LR
Sbjct: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGTLR 360

Query: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
           GGIEFLELCGFEKIEG EFLFLPR+KVDRAVLN+AGSELDSAIKNPFFGVL
Sbjct: 361 GGIEFLELCGFEKIEGGEFLFLPRNKVDRAVLNTAGSELDSAIKNPFFGVL 411

[Close]

BLAST of Cp4.1LG17g02690 vs. ExPASy TrEMBL
Match: A0A6J1CBW3 (UBX domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111009800 PE=4 SV=1)

HSP 1 Score: 714 bits (1844), Expect = 3.13e-258
Identity = 386/411 (93.92%), Postives = 399/411 (97.08%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNL+C ACGKPCRSKTESDL
Sbjct: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLVCAACGKPCRSKTESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEFTDKTLEAAKPISLEAPKV+AESED GD SASKSEEMVVPEV+K+IL ELE
Sbjct: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVSAESEDAGDESASKSEEMVVPEVDKNILGELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           +MGF TARATRAL+YSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEA KP+LTPEQ
Sbjct: 121 AMGFPTARATRALFYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAQKPSLTPEQ 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           LKAKQQELRERARKKKEEEEK+AEREREKERIRIGKELLEAKRIEE NERKRI+ALRKAE
Sbjct: 181 LKAKQQELRERARKKKEEEEKIAEREREKERIRIGKELLEAKRIEEENERKRIMALRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPSTAKPPAPVVEEKKLSLPVRPASKAEQ 300
           KEEEKRARDKIRQKLEEDKAERRRRLGLP EDPSTAKP APVVEEKK+SLPVRPASKAEQ
Sbjct: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPPEDPSTAKPSAPVVEEKKISLPVRPASKAEQ 300

Query: 301 MRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALR 360
           MRECLR LKSNHKEDDAKVKRAFQTLLTYVGNV ++PDEEKFRKIRLSNQTFQ+RVGALR
Sbjct: 301 MRECLRLLKSNHKEDDAKVKRAFQTLLTYVGNVARSPDEEKFRKIRLSNQTFQERVGALR 360

Query: 361 GGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411
           GGIEFLELCGFEKIEG EFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL
Sbjct: 361 GGIEFLELCGFEKIEGGEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 411

[Close]

BLAST of Cp4.1LG17g02690 vs. TAIR 10
Match: AT1G04850.1 (ubiquitin-associated (UBA)/TS-N domain-containing protein )

HSP 1 Score: 627.1 bits (1616), Expect = 1.0e-179
Identity = 332/413 (80.39%), Postives = 371/413 (89.83%), Query Frame = 0


Query: 1   MAGLSLKCGDCGALLRSVEEAQEHAELTSHSNFSESTEAVLNLICTACGKPCRSKTESDL 60
           MAG+SLKCGDCG LL+SVEEAQEHAELTSHSNF+ESTEAVLNL+CT C KPCRSK ESDL
Sbjct: 1   MAGVSLKCGDCGTLLKSVEEAQEHAELTSHSNFAESTEAVLNLVCTTCTKPCRSKIESDL 60

Query: 61  HTKRTGHTEFTDKTLEAAKPISLEAPKVAAESEDGGDASASKSEEMVVPEVNKSILEELE 120
           HTKRTGHTEF DKTLE  KPISLEAPKVA E +D    S   +EEMVVP+V+ +ILEELE
Sbjct: 61  HTKRTGHTEFVDKTLETIKPISLEAPKVAMEIDDNASGSGEAAEEMVVPDVDNNILEELE 120

Query: 121 SMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQMPLVPKDTKVEAPKPALTPEQ 180
           +MGF  ARATRAL+YSGNASLEAAVNWVVEHENDP++D+MP VP ++ V   KPALTPE+
Sbjct: 121 AMGFPKARATRALHYSGNASLEAAVNWVVEHENDPDVDEMPKVPSNSNVGPAKPALTPEE 180

Query: 181 LKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAE 240
           +K K QELRERARKKKEEEEK  EREREKERIRIGKELLEAKR+EE+NERKR++ LRKAE
Sbjct: 181 VKLKAQELRERARKKKEEEEKRMEREREKERIRIGKELLEAKRMEEVNERKRLMFLRKAE 240

Query: 241 KEEEKRARDKIRQKLEEDKAERRRRLGLPAEDPST--AKPPAPVVEEKKLSLPVRPASKA 300
           KEEEKRAR+KIRQKLEEDKAERRR+LGLP EDP+T  AKP  PVVEEKK++LP+RPA+K 
Sbjct: 241 KEEEKRAREKIRQKLEEDKAERRRKLGLPPEDPATAAAKPSVPVVEEKKVTLPIRPATKT 300

Query: 301 EQMRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGA 360
           EQMRECLRSLK  HKEDDAKVKRAFQTLLTY+GNV KNPDEEKFRKIRL+NQTFQ+RVG+
Sbjct: 301 EQMRECLRSLKQAHKEDDAKVKRAFQTLLTYMGNVAKNPDEEKFRKIRLTNQTFQERVGS 360

Query: 361 LRGGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 412
           LRGGIEF+ELCGFEKIEG EFLFLPRDK+D A++NSAG+EL+SAI NPFFGVL
Sbjct: 361 LRGGIEFMELCGFEKIEGGEFLFLPRDKIDSAIINSAGTELNSAINNPFFGVL 413

[Close]

BLAST of Cp4.1LG17g02690 vs. TAIR 10
Match: AT5G48690.1 (CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 7001 Blast hits to 5165 proteins in 492 species: Archae - 9; Bacteria - 505; Metazoa - 2653; Fungi - 905; Plants - 287; Viruses - 19; Other Eukaryotes - 2623 (source: NCBI BLink). )

HSP 1 Score: 285.4 bits (729), Expect = 7.2e-77
Identity = 170/315 (53.97%), Postives = 226/315 (71.75%), Query Frame = 0


Query: 101 SKSEEMVVPEVNKSILEELESMGFATARATRALYYSGNASLEAAVNWVVEHENDPEIDQM 160
           S   E    EVN  +L+ELE MGF+ ARA  AL++SGN+SLEAAVNW+++HEN+ + + M
Sbjct: 2   SDGTENAAIEVNHGLLKELEDMGFSMARAAWALHHSGNSSLEAAVNWIIDHENESQFENM 61

Query: 161 PLVPKDTKVEAPKPA-LTPEQLKAKQQELRERARKKKEEEEKLAEREREKERIRIGKELL 220
           PLV  + ++E+P P+  T E   A+ +EL E+ARK +EE+E   EREREKERIR GKEL+
Sbjct: 62  PLVEFNIEIESPNPSDDTAETSHARAKELSEQARKLREEQETKREREREKERIRAGKELM 121

Query: 221 EAKRIEELNERKRILALRKAEKEEEKRARDKIRQKLEEDKAERRRRLGLP--AEDPSTAK 280
           E KRI E NERKR +ALRKAEK+EEK+AR+KI  K+  DK ER+RRLGLP   E  ST+ 
Sbjct: 122 ETKRIAEENERKRNIALRKAEKDEEKKAREKIMLKVNADKLERKRRLGLPTETESASTSN 181

Query: 281 PPAPVVEEKKLSLPVRPASKAEQMRECLRSLKSNHKEDDAKV-KRAFQTLLTYVGNVVKN 340
           P +P+  ++ +       SKAE+MRECLRSL+ NHK++D ++ +R F+TLLT V NV K 
Sbjct: 182 PVSPLDPKRIVMSSPSVVSKAEEMRECLRSLRRNHKDEDPRITRRVFETLLTIVRNVAKK 241

Query: 341 PDEEKFRKIRLSNQTFQDRVGALRGGIEFLELCGFEKIEGDEFLFLPRDKVDRAVLNSAG 400
           PDEE++R+IRL N+ F +RVG  + GIEF+ELCGF+++EG EFL L +   D   L  A 
Sbjct: 242 PDEERYRRIRLKNRLFHERVGRYKEGIEFMELCGFKRVEGSEFLSLSKRDSDINRLRDAA 301

Query: 401 SELDSAIKNPFFGVL 412
             L+SA  NPFFG+L
Sbjct: 302 FLLNSASANPFFGLL 316

[Close]

BLAST of Cp4.1LG17g02690 vs. TAIR 10
Match: AT5G48690.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 213.0 bits (541), Expect = 4.5e-55
Identity = 127/226 (56.19%), Postives = 165/226 (73.01%), Query Frame = 0


Query: 189 RERARKKKEEEEKLAEREREKERIRIGKELLEAKRIEELNERKRILALRKAEKEEEKRAR 248
           +E+ARK +EE+E   EREREKERIR GKEL+E KRI E NERKR +ALRKAEK+EEK+AR
Sbjct: 41  KEQARKLREEQETKREREREKERIRAGKELMETKRIAEENERKRNIALRKAEKDEEKKAR 100

Query: 249 DKIRQKLEEDKAERRRRLGLP--AEDPSTAKPPAPVVEEKKLSLPVRPASKAEQMRECLR 308
           +KI  K+  DK ER+RRLGLP   E  ST+ P +P+  ++ +       SKAE+MRECLR
Sbjct: 101 EKIMLKVNADKLERKRRLGLPTETESASTSNPVSPLDPKRIVMSSPSVVSKAEEMRECLR 160

Query: 309 SLKSNHKEDDAKV-KRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALRGGIEF 368
           SL+ NHK++D ++ +R F+TLLT V NV K PDEE++R+IRL N+ F +RVG  + GIEF
Sbjct: 161 SLRRNHKDEDPRITRRVFETLLTIVRNVAKKPDEERYRRIRLKNRLFHERVGRYKEGIEF 220

Query: 369 LELCGFEKIEGDEFLFLPRDKVDRAVLNSAGSELDSAIKNPFFGVL 412
           +ELCGF+++EG EFL L +   D   L  A   L+SA  NPFFG+L
Sbjct: 221 MELCGFKRVEGSEFLSLSKRDSDINRLRDAAFLLNSASANPFFGLL 266

[Close]

BLAST of Cp4.1LG17g02690 vs. TAIR 10
Match: AT2G01650.1 (plant UBX domain-containing protein 2 )

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-08
Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 322 AFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALRGGIEFLELCGFE-KIEGDE 379
           +   LL    N+VK P+  KFRK+R+SN   ++ +G + GG+E LEL GFE K E DE
Sbjct: 182 SIDVLLRLFKNIVKEPENAKFRKVRMSNAKIKEAIGDVAGGVELLELVGFELKEENDE 239

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g02690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6GL77	7.1e-13	35.29	UBX domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubxn1 PE=2 SV=1	[more]
Q04323	1.3e-11	33.17	UBX domain-containing protein 1 OS=Homo sapiens OX=9606 GN=UBXN1 PE=1 SV=2	[more]
Q32KW2	2.3e-11	33.17	UBX domain-containing protein 1 OS=Bos taurus OX=9913 GN=UBXN1 PE=2 SV=1	[more]
Q6GLV4	3.9e-11	36.50	UBX domain-containing protein 1-B OS=Xenopus laevis OX=8355 GN=ubxn1-b PE=2 SV=1	[more]
Q499N6	5.1e-11	34.65	UBX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubxn1 PE=3 SV=2	[more]

BLAST of Cp4.1LG17g02690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514926.1	3.93e-275	100.00	chromatin assembly factor 1 subunit A [Cucurbita pepo subsp. pepo] >XP_023514927...	[more]
XP_022964544.1	7.59e-273	99.03	chromatin assembly factor 1 subunit A [Cucurbita moschata] >XP_022964545.1 chrom...	[more]
XP_022999940.1	1.08e-272	99.03	chromatin assembly factor 1 subunit A [Cucurbita maxima]	[more]
KAG7026056.1	4.38e-272	98.78	UBX domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038874495.1	1.49e-263	95.62	chromatin assembly factor 1 subunit A-B [Benincasa hispida]	[more]

BLAST of Cp4.1LG17g02690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HNI9	3.67e-273	99.03	chromatin assembly factor 1 subunit A OS=Cucurbita moschata OX=3662 GN=LOC111464...	[more]
A0A6J1KGZ6	5.22e-273	99.03	chromatin assembly factor 1 subunit A OS=Cucurbita maxima OX=3661 GN=LOC11149426...	[more]
A0A0A0LL71	2.81e-261	94.40	UBA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G139840 PE=4 SV...	[more]
A0A1S3C4L3	2.31e-260	94.16	chromatin assembly factor 1 subunit A OS=Cucumis melo OX=3656 GN=LOC103496959 PE...	[more]
A0A6J1CBW3	3.13e-258	93.92	UBX domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111009800 P...	[more]

BLAST of Cp4.1LG17g02690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04850.1	1.0e-179	80.39	ubiquitin-associated (UBA)/TS-N domain-containing protein	[more]
AT5G48690.1	7.2e-77	53.97	CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor E...	[more]
AT5G48690.2	4.5e-55	56.19	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G01650.1	1.9e-08	46.55	plant UBX domain-containing protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 181..215
None	No IPR available	COILS	Coil	Coil	coord: 224..261
None	No IPR available	SMART	SM00580	PGNneu	coord: 321..384 e-value: 8.7E-24 score: 95.0
None	No IPR available	GENE3D	1.10.8.10		coord: 113..157 e-value: 3.4E-19 score: 70.5
None	No IPR available	GENE3D	1.20.58.2190		coord: 303..401 e-value: 3.4E-28 score: 99.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..105
None	No IPR available	PANTHER	PTHR46713	F13M7.16 PROTEIN	coord: 1..411
None	No IPR available	PANTHER	PTHR46713:SF1	F13M7.16 PROTEIN	coord: 1..411
None	No IPR available	CDD	cd14290	UBA_PUB_plant	coord: 110..158 e-value: 1.16862E-21 score: 85.5708
None	No IPR available	CDD	cd10461	PUB_UBA_plant	coord: 305..411 e-value: 4.51686E-63 score: 196.5
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 112..150 e-value: 4.9E-4 score: 29.4
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 112..147 e-value: 3.7E-8 score: 33.1
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 110..151 score: 11.125165
IPR018997	PUB domain	PFAM	PF09409	PUB	coord: 318..389 e-value: 1.1E-24 score: 86.2
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 45..67
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 8..30
IPR036339	PUB-like domain superfamily	SUPERFAMILY	143503	PUG domain-like	coord: 297..407
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 97..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g02690.1	Cp4.1LG17g02690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding