Homology
BLAST of Cp4.1LG17g02200 vs. ExPASy Swiss-Prot
Match:
P26369 (Splicing factor U2AF 65 kDa subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=3)
HSP 1 Score: 133.7 bits (335), Expect = 1.1e-29
Identity = 97/321 (30.22%), Postives = 157/321 (48.91%), Query Frame = 0
Query: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
+Q TR RRLY+ N+P +E+A++D N + G+ G P ++ I++D+ A +
Sbjct: 142 SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPG-NPVLAVQINQDKNFAFL 201
Query: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTG 540
EF + ++ + A++FDG F G L+IRRP DY L G
Sbjct: 202 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL-----------------------PG 261
Query: 541 DLEK-SVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIV 600
E SV V +S VV DS +K+ + G+ N ++ + Q+K ++
Sbjct: 262 MSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDD------------------QVKELL 321
Query: 601 AAFGPLKAYHF--EINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPA---- 660
+FGPLKA++ + L++ AF EYVD +V +A AGLNGM++G + L V A
Sbjct: 322 TSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 381
Query: 661 --VPIASLER--NGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLP--LLSESDINEVL 720
+ SL N +P + +Q +V VLP LL + + E++
Sbjct: 382 KNATLVSLPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIV 420
Query: 721 EDIRFECARFGTVKSMNVAKP 729
ED+R EC+++G VKS+ + +P
Sbjct: 442 EDVRDECSKYGLVKSIEIPRP 420
BLAST of Cp4.1LG17g02200 vs. ExPASy Swiss-Prot
Match:
Q24562 (Splicing factor U2AF 50 kDa subunit OS=Drosophila melanogaster OX=7227 GN=U2af50 PE=1 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 3.3e-29
Identity = 95/334 (28.44%), Postives = 160/334 (47.90%), Query Frame = 0
Query: 424 TRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALVEFL 483
TR RRLY+ N+P +E+ +++ N + G+ G+ P ++C I+ D+ A +EF
Sbjct: 89 TRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQINLDKNFAFLEFR 148
Query: 484 TPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTGDLE 543
+ ++ + A++FDG + G L+IRRP DY Q + T ++
Sbjct: 149 SIDETTQAMAFDGINLKGQSLKIRRPHDY------------------QPMPGITDTPAIK 208
Query: 544 KSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIVAAFG 603
+V IS VV DSP+KI + G+ N ++ + Q+K ++ +FG
Sbjct: 209 PAVVSSGVISTVVPDSPHKIFIGGLPNYLNDD------------------QVKELLLSFG 268
Query: 604 PLKAYHF--EINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLER 663
L+A++ + L++ AF EYVD S+ ++ AGLNGM++G + L V A A +
Sbjct: 269 KLRAFNLVKDAATGLSKGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQ 328
Query: 664 NGCQPCYGIPEHVKPLLQ-----QPTVVL-KVNVFNADVLPLLSESDINEVLEDIRFECA 723
N + V L PT VL +N+ D L E + ++LEDI+ EC
Sbjct: 329 NAANTTQSVMLQVPGLSNVVTSGPPTEVLCLLNMVTPD--ELRDEEEYEDILEDIKEECT 383
Query: 724 RFGTVKSMNVAKP-----CTSCVSAEEEYKSICD 745
++G V+S+ + +P C E+ S+ D
Sbjct: 389 KYGVVRSVEIPRPIEGVEVPGCGKVFVEFNSVLD 383
BLAST of Cp4.1LG17g02200 vs. ExPASy Swiss-Prot
Match:
P26368 (Splicing factor U2AF 65 kDa subunit OS=Homo sapiens OX=9606 GN=U2AF2 PE=1 SV=4)
HSP 1 Score: 131.7 bits (330), Expect = 4.3e-29
Identity = 96/323 (29.72%), Postives = 158/323 (48.92%), Query Frame = 0
Query: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
+Q TR RRLY+ N+P +E+A++D N + G+ G P ++ I++D+ A +
Sbjct: 142 SQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPG-NPVLAVQINQDKNFAFL 201
Query: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTG 540
EF + ++ + A++FDG F G L+IRRP DY L G
Sbjct: 202 EFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL-----------------------PG 261
Query: 541 DLEK-SVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIV 600
E SV V +S VV DS +K+ + G+ N ++ + Q+K ++
Sbjct: 262 MSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDD------------------QVKELL 321
Query: 601 AAFGPLKAYHF--EINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPA---- 660
+FGPLKA++ + L++ AF EYVD +V +A AGLNGM++G + L V A
Sbjct: 322 TSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 381
Query: 661 ------VPIASLERNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLP--LLSESDINE 720
P +++ N +P + +Q +V VLP LL + + E
Sbjct: 382 KNATLVSPPSTI--NQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEE 420
Query: 721 VLEDIRFECARFGTVKSMNVAKP 729
++ED+R EC+++G VKS+ + +P
Sbjct: 442 IVEDVRDECSKYGLVKSIEIPRP 420
BLAST of Cp4.1LG17g02200 vs. ExPASy Swiss-Prot
Match:
P90978 (Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis elegans OX=6239 GN=uaf-1 PE=2 SV=2)
HSP 1 Score: 129.0 bits (323), Expect = 2.8e-28
Identity = 86/308 (27.92%), Postives = 154/308 (50.00%), Query Frame = 0
Query: 428 RRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALVEFLTPED 487
RRLY+ N+P +E+A++D N + G+ G P + C I+ D+ A +EF + ++
Sbjct: 184 RRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPG-NPILLCQINLDKNFAFIEFRSIDE 243
Query: 488 ASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTGDLEKSVA 547
+A ++FDG +F G L++RRP+DY T D+ +
Sbjct: 244 TTAGMAFDGINFMGQQLKVRRPRDYQP---------------------SQNTFDMNSRMP 303
Query: 548 VVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIVAAFGPLKA 607
V S +V DS NKI + G+ N ++ + Q+K ++ +FGPLKA
Sbjct: 304 V----STIVVDSANKIFIGGLPNYLTED------------------QVKELLCSFGPLKA 363
Query: 608 YHFEINNDLN-EPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLER----- 667
+ +++ N + AF EY+D ++ +A AGLNGM++G + L V + A+ +R
Sbjct: 364 FSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVV--QLACANQQRHNTNL 423
Query: 668 -NGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 727
N GI + + + ++ +N+ D L ++ + E+LED+R EC+++G V
Sbjct: 424 PNSASAIAGI-DLSQGAGRATEILCLMNMVTED--ELKADDEYEEILEDVRDECSKYGIV 442
Query: 728 KSMNVAKP 729
+S+ + +P
Sbjct: 484 RSLEIPRP 442
BLAST of Cp4.1LG17g02200 vs. ExPASy Swiss-Prot
Match:
P90727 (Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis briggsae OX=6238 GN=uaf-1 PE=3 SV=2)
HSP 1 Score: 128.6 bits (322), Expect = 3.6e-28
Identity = 86/306 (28.10%), Postives = 150/306 (49.02%), Query Frame = 0
Query: 428 RRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALVEFLTPED 487
RRLY+ N+P +E+A++D N + + G P + C I+ D+ A +EF + ++
Sbjct: 175 RRLYVGNIPFGCNEEAMLDFFNQQMHLCNLAQAPG-NPILLCQINLDKNFAFIEFRSIDE 234
Query: 488 ASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTGDLEKSVA 547
+A ++FDG +F G L++RRP+DY T D+ +
Sbjct: 235 TTAGMAFDGINFMGQQLKVRRPRDYQP---------------------SQNTFDMNARMP 294
Query: 548 VVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIVAAFGPLKA 607
V S +V DS NKI + G+ N ++ + Q+K ++ +FGPLKA
Sbjct: 295 V----SSIVVDSANKIFIGGLPNYLTED------------------QVKELLCSFGPLKA 354
Query: 608 YHFEINNDLN-EPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLER----N 667
+ +++ N + AF EY+D ++ +A AGLNGM++G + L V A + N
Sbjct: 355 FSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQTRHNTHLPN 414
Query: 668 GCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTVKS 727
GI + + + ++ +N+ D L S+ D E+LED+R EC+++G V+S
Sbjct: 415 SASAIAGI-DLSQGAGRATEILCLMNMVTED--ELRSDEDYEEILEDVREECSKYGIVRS 433
Query: 728 MNVAKP 729
+ + +P
Sbjct: 475 LEIPRP 433
BLAST of Cp4.1LG17g02200 vs. NCBI nr
Match:
XP_023514084.1 (splicing factor U2af large subunit A [Cucurbita pepo subsp. pepo] >XP_023514085.1 splicing factor U2af large subunit A [Cucurbita pepo subsp. pepo] >XP_023514086.1 splicing factor U2af large subunit A [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1728 bits (4476), Expect = 0.0
Identity = 910/950 (95.79%), Postives = 910/950 (95.79%), Query Frame = 0
Query: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR
Sbjct: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
Query: 61 RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSDR 120
RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSDR
Sbjct: 61 RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSDR 120
Query: 121 NNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
NNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD
Sbjct: 121 NNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
Query: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHHE 240
RREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHHE
Sbjct: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHHE 240
Query: 241 DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI
Sbjct: 241 DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
Query: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG
Sbjct: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
Query: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL 420
LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL
Sbjct: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL 420
Query: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV
Sbjct: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
Query: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTG 540
EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV TG
Sbjct: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV----------------------TG 540
Query: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIVA 600
DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEM LKNIVA
Sbjct: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEM------------------LKNIVA 600
Query: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE 660
AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE
Sbjct: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE 660
Query: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV
Sbjct: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
Query: 721 KSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDNCPDATYQE 780
KSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDNCPDATYQE
Sbjct: 721 KSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDNCPDATYQE 780
Query: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQSSPGNELHDV 840
QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQSSPGNELHDV
Sbjct: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQSSPGNELHDV 840
Query: 841 KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENREKKERNNNLES 900
KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENREKKERNNNLES
Sbjct: 841 KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENREKKERNNNLES 900
Query: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFSK 950
SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFSK
Sbjct: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFSK 910
BLAST of Cp4.1LG17g02200 vs. NCBI nr
Match:
XP_022964139.1 (splicing factor U2af large subunit A-like [Cucurbita moschata] >XP_022964140.1 splicing factor U2af large subunit A-like [Cucurbita moschata] >XP_022964141.1 splicing factor U2af large subunit A-like [Cucurbita moschata])
HSP 1 Score: 1694 bits (4388), Expect = 0.0
Identity = 893/950 (94.00%), Postives = 899/950 (94.63%), Query Frame = 0
Query: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR
Sbjct: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
Query: 61 RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSDR 120
RESIDKHITAN ESERHFRHSRGSSLD+QNLPLEESA+ISSRRKKEETLLKDNMVIRSDR
Sbjct: 61 RESIDKHITANLESERHFRHSRGSSLDLQNLPLEESAKISSRRKKEETLLKDNMVIRSDR 120
Query: 121 NNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
NNY SGLTLIGKLK DTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKR SRDAAGKD
Sbjct: 121 NNYESGLTLIGKLKRDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRRSRDAAGKD 180
Query: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHHE 240
RREDRGKGKSERESKRKYQHGDDDRNRDRHI+KKHDHGKHHDLESKERKEAKI LSSHHE
Sbjct: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHITKKHDHGKHHDLESKERKEAKISLSSHHE 240
Query: 241 DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI
Sbjct: 241 DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
Query: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAE VG
Sbjct: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAETVG 360
Query: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL 420
LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNAS+DSIQL
Sbjct: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASIDSIQL 420
Query: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV
Sbjct: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
Query: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTG 540
EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV TG
Sbjct: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV----------------------TG 540
Query: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIVA 600
DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEM LKNIVA
Sbjct: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEM------------------LKNIVA 600
Query: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE 660
AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE
Sbjct: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE 660
Query: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV
Sbjct: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
Query: 721 KSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDNCPDATYQE 780
KSMNVAK CTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRND DHDDNCPD TYQE
Sbjct: 721 KSMNVAKSCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDTDHDDNCPDDTYQE 780
Query: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQSSPGNELHDV 840
QGNYPHNGRHKNEVVEDKLCHMGIKDATCFED+VCKSASETIPRGCCDKQSSPGNELHDV
Sbjct: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDVVCKSASETIPRGCCDKQSSPGNELHDV 840
Query: 841 KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENREKKERNNNLES 900
KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSE REKKERNNNLES
Sbjct: 841 KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSEKREKKERNNNLES 900
Query: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFSK 950
SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYH+RF K
Sbjct: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHRRFPK 910
BLAST of Cp4.1LG17g02200 vs. NCBI nr
Match:
KAG6593827.1 (Splicing factor U2AF 65 kDa subunit, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1693 bits (4384), Expect = 0.0
Identity = 892/950 (93.89%), Postives = 900/950 (94.74%), Query Frame = 0
Query: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR
Sbjct: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
Query: 61 RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSDR 120
RESIDKHITANRESERHFRHSRGSSLD+QNLPLEESA+ISSRRKKEETLLKDNMVIRSDR
Sbjct: 61 RESIDKHITANRESERHFRHSRGSSLDLQNLPLEESAKISSRRKKEETLLKDNMVIRSDR 120
Query: 121 NNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
NNY SGLTLIGKLK DTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD
Sbjct: 121 NNYESGLTLIGKLKRDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
Query: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHHE 240
RREDRGKGKSERESKRKYQHGDDDRNRDRHI+KKHDHGKHHDLESKERKEAKI LSSHHE
Sbjct: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHITKKHDHGKHHDLESKERKEAKISLSSHHE 240
Query: 241 DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
DSRLKKRRKRSLD QSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI
Sbjct: 241 DSRLKKRRKRSLDRQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
Query: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG
Sbjct: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
Query: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL 420
LFSGSVTSNFQPSNPTVSSGISNDPS GALFSLAMGKSLSGVSSNNLATKTNASVDSIQL
Sbjct: 361 LFSGSVTSNFQPSNPTVSSGISNDPSSGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL 420
Query: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV
Sbjct: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
Query: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTG 540
EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV TG
Sbjct: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV----------------------TG 540
Query: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIVA 600
DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEM LKNIVA
Sbjct: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEM------------------LKNIVA 600
Query: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE 660
AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE
Sbjct: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE 660
Query: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV
Sbjct: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
Query: 721 KSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDNCPDATYQE 780
KSMNVAKPCTSC+SAEEEYKSICDVTDVEIKHEIQEISTIVISRND DHDDNCPD TYQE
Sbjct: 721 KSMNVAKPCTSCISAEEEYKSICDVTDVEIKHEIQEISTIVISRNDTDHDDNCPDDTYQE 780
Query: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQSSPGNELHDV 840
+GNYPHNGRHKNEVVEDKLCHMGIKDATCFED+VCKSASETIP+G CDKQSSPGNELHDV
Sbjct: 781 KGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDVVCKSASETIPQGYCDKQSSPGNELHDV 840
Query: 841 KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENREKKERNNNLES 900
KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSE REKKERNNNLES
Sbjct: 841 KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSEKREKKERNNNLES 900
Query: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFSK 950
SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYH+RF K
Sbjct: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHRRFPK 910
BLAST of Cp4.1LG17g02200 vs. NCBI nr
Match:
KAG7026156.1 (Splicing factor U2AF 65 kDa subunit [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1681 bits (4353), Expect = 0.0
Identity = 894/978 (91.41%), Postives = 900/978 (92.02%), Query Frame = 0
Query: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR
Sbjct: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
Query: 61 RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSDR 120
RESIDKHITANRESERHFRHSRGSSLD+QNLPLEESA+ISSRRKKEETLLKDNMVIRSDR
Sbjct: 61 RESIDKHITANRESERHFRHSRGSSLDLQNLPLEESAKISSRRKKEETLLKDNMVIRSDR 120
Query: 121 NNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
NNY SGLTLIGKLK DTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD
Sbjct: 121 NNYESGLTLIGKLKRDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
Query: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHHE 240
RREDRGKGKSERESKRKYQHGDDDRNRDRHI+KKHDHGKHHDLESKERKEAKI LSSHHE
Sbjct: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHITKKHDHGKHHDLESKERKEAKISLSSHHE 240
Query: 241 DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
DSRLKKRRKRSLD QSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI
Sbjct: 241 DSRLKKRRKRSLDRQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
Query: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG
Sbjct: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
Query: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL 420
LFSGSVTSNFQPSNPTVSSGISNDPS GALFSLAMGKSLSGVSSNNLATKTNASVDSIQL
Sbjct: 361 LFSGSVTSNFQPSNPTVSSGISNDPSSGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL 420
Query: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV
Sbjct: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
Query: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTG 540
EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV TG
Sbjct: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV----------------------TG 540
Query: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIVA 600
DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEM LKNIVA
Sbjct: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEM------------------LKNIVA 600
Query: 601 AFGPLKAYHFEINNDLNEPCAFLE----------------------------YVDQSVMP 660
AFGPLKAYHFEINNDLNEPCAFLE YVDQSVMP
Sbjct: 601 AFGPLKAYHFEINNDLNEPCAFLELYINSPKASIYRHIIAHGNPLIISSRLFYVDQSVMP 660
Query: 661 KACAGLNGMKIGGQVLKVFPAVPIASLERNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNA 720
KACAGLNGMKIGGQVLKVFPAVPIASLERNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNA
Sbjct: 661 KACAGLNGMKIGGQVLKVFPAVPIASLERNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNA 720
Query: 721 DVLPLLSESDINEVLEDIRFECARFGTVKSMNVAKPCTSCVSAEEEYKSICDVTDVEIKH 780
DVLPLLSESDINEVLEDIRFECARFGTVKSMNVAKPCTSC+SAEEEYKSICDVTDVEIKH
Sbjct: 721 DVLPLLSESDINEVLEDIRFECARFGTVKSMNVAKPCTSCISAEEEYKSICDVTDVEIKH 780
Query: 781 EIQEISTIVISRNDNDHDDNCPDATYQEQGNYPHNGRHKNEVVEDKLCHMGIKDATCFED 840
EIQEISTIVISRND DHDDNCPD TYQEQGNYPHNGRHKNEVVEDKLCHMGIKDAT FED
Sbjct: 781 EIQEISTIVISRNDTDHDDNCPDDTYQEQGNYPHNGRHKNEVVEDKLCHMGIKDATYFED 840
Query: 841 IVCKSASETIPRGCCDKQSSPGNELHDVKVAKIIETGSDEKPVLLGDSTTVVADDEKKVL 900
+VCKSASETIPRGCCDKQSSPGNELHDVKVAKIIETGSDEKPVLLGDSTTVVADDEKKVL
Sbjct: 841 VVCKSASETIPRGCCDKQSSPGNELHDVKVAKIIETGSDEKPVLLGDSTTVVADDEKKVL 900
Query: 901 HGMDPMVRTDSDTSENREKKERNNNLESSFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQ 950
HGMDPMVRTDSDTSE REKKERNNNLESSFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQ
Sbjct: 901 HGMDPMVRTDSDTSEKREKKERNNNLESSFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQ 938
BLAST of Cp4.1LG17g02200 vs. NCBI nr
Match:
XP_023000460.1 (splicing factor U2af large subunit A-like [Cucurbita maxima] >XP_023000461.1 splicing factor U2af large subunit A-like [Cucurbita maxima] >XP_023000462.1 splicing factor U2af large subunit A-like [Cucurbita maxima])
HSP 1 Score: 1672 bits (4330), Expect = 0.0
Identity = 880/950 (92.63%), Postives = 892/950 (93.89%), Query Frame = 0
Query: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
MSTYSCSKQYSRTSAKQ LYNSNDESAARTRPFSFEDIMLRRKNKESAA DGGDT S SR
Sbjct: 1 MSTYSCSKQYSRTSAKQCLYNSNDESAARTRPFSFEDIMLRRKNKESAATDGGDTSSQSR 60
Query: 61 RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSDR 120
RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESA+ISSRRKKEETLLKDNMVIRSDR
Sbjct: 61 RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESAKISSRRKKEETLLKDNMVIRSDR 120
Query: 121 NNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
NNY SGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD
Sbjct: 121 NNYESGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
Query: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHHE 240
RRE+RGKGKSERESKRKYQHGDDDRNRDRHI+KKHDHGKHHDLESKERKEAKI LSSHHE
Sbjct: 181 RRENRGKGKSERESKRKYQHGDDDRNRDRHITKKHDHGKHHDLESKERKEAKISLSSHHE 240
Query: 241 DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
DSRLKKRRKRSLD QSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI
Sbjct: 241 DSRLKKRRKRSLDRQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
Query: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
GDFTNSSSSQYRRHSG TRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG
Sbjct: 301 GDFTNSSSSQYRRHSGLTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
Query: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL 420
LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSL GKSLSG+SSNNLATKTNAS DSIQL
Sbjct: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLTTGKSLSGISSNNLATKTNASFDSIQL 420
Query: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV
Sbjct: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
Query: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTG 540
EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV TG
Sbjct: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV----------------------TG 540
Query: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIVA 600
DL+KSVAVVNKI+DVVEDSPNKII+AGISNRISSEM LKNIVA
Sbjct: 541 DLDKSVAVVNKINDVVEDSPNKIIIAGISNRISSEM------------------LKNIVA 600
Query: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE 660
AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGG+VLKVFPAVPIASLE
Sbjct: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGEVLKVFPAVPIASLE 660
Query: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV
Sbjct: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
Query: 721 KSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDNCPDATYQE 780
KSMNVAKPCTSCVSAEEEY+SICD+TDVEIKHEIQEISTIVISRND DHDDNC D TYQE
Sbjct: 721 KSMNVAKPCTSCVSAEEEYQSICDITDVEIKHEIQEISTIVISRNDTDHDDNCLDYTYQE 780
Query: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQSSPGNELHDV 840
QGNYPHNGRHKNEVVEDKLCHMGIKDATCFED+VCKSA ETIPRGCCDKQSSPGNELH V
Sbjct: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDVVCKSALETIPRGCCDKQSSPGNELHGV 840
Query: 841 KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENREKKERNNNLES 900
KVAKIIETGSDEKPVLLGDS+TVVADDEKKVLHGMDPMVRTDSDTSE REKKERNNNLES
Sbjct: 841 KVAKIIETGSDEKPVLLGDSSTVVADDEKKVLHGMDPMVRTDSDTSEKREKKERNNNLES 900
Query: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFSK 950
SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRF K
Sbjct: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFPK 910
BLAST of Cp4.1LG17g02200 vs. ExPASy TrEMBL
Match:
A0A6J1HJZ8 (splicing factor U2af large subunit A-like OS=Cucurbita moschata OX=3662 GN=LOC111464254 PE=4 SV=1)
HSP 1 Score: 1694 bits (4388), Expect = 0.0
Identity = 893/950 (94.00%), Postives = 899/950 (94.63%), Query Frame = 0
Query: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR
Sbjct: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
Query: 61 RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSDR 120
RESIDKHITAN ESERHFRHSRGSSLD+QNLPLEESA+ISSRRKKEETLLKDNMVIRSDR
Sbjct: 61 RESIDKHITANLESERHFRHSRGSSLDLQNLPLEESAKISSRRKKEETLLKDNMVIRSDR 120
Query: 121 NNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
NNY SGLTLIGKLK DTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKR SRDAAGKD
Sbjct: 121 NNYESGLTLIGKLKRDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRRSRDAAGKD 180
Query: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHHE 240
RREDRGKGKSERESKRKYQHGDDDRNRDRHI+KKHDHGKHHDLESKERKEAKI LSSHHE
Sbjct: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHITKKHDHGKHHDLESKERKEAKISLSSHHE 240
Query: 241 DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI
Sbjct: 241 DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
Query: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAE VG
Sbjct: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAETVG 360
Query: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL 420
LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNAS+DSIQL
Sbjct: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASIDSIQL 420
Query: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV
Sbjct: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
Query: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTG 540
EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV TG
Sbjct: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV----------------------TG 540
Query: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIVA 600
DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEM LKNIVA
Sbjct: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEM------------------LKNIVA 600
Query: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE 660
AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE
Sbjct: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE 660
Query: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV
Sbjct: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
Query: 721 KSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDNCPDATYQE 780
KSMNVAK CTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRND DHDDNCPD TYQE
Sbjct: 721 KSMNVAKSCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDTDHDDNCPDDTYQE 780
Query: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQSSPGNELHDV 840
QGNYPHNGRHKNEVVEDKLCHMGIKDATCFED+VCKSASETIPRGCCDKQSSPGNELHDV
Sbjct: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDVVCKSASETIPRGCCDKQSSPGNELHDV 840
Query: 841 KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENREKKERNNNLES 900
KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSE REKKERNNNLES
Sbjct: 841 KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSEKREKKERNNNLES 900
Query: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFSK 950
SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYH+RF K
Sbjct: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHRRFPK 910
BLAST of Cp4.1LG17g02200 vs. ExPASy TrEMBL
Match:
A0A6J1KDP6 (splicing factor U2af large subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC111494723 PE=4 SV=1)
HSP 1 Score: 1672 bits (4330), Expect = 0.0
Identity = 880/950 (92.63%), Postives = 892/950 (93.89%), Query Frame = 0
Query: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAANDGGDTGSHSR 60
MSTYSCSKQYSRTSAKQ LYNSNDESAARTRPFSFEDIMLRRKNKESAA DGGDT S SR
Sbjct: 1 MSTYSCSKQYSRTSAKQCLYNSNDESAARTRPFSFEDIMLRRKNKESAATDGGDTSSQSR 60
Query: 61 RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSDR 120
RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESA+ISSRRKKEETLLKDNMVIRSDR
Sbjct: 61 RESIDKHITANRESERHFRHSRGSSLDVQNLPLEESAKISSRRKKEETLLKDNMVIRSDR 120
Query: 121 NNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
NNY SGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD
Sbjct: 121 NNYESGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGKD 180
Query: 181 RREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHHE 240
RRE+RGKGKSERESKRKYQHGDDDRNRDRHI+KKHDHGKHHDLESKERKEAKI LSSHHE
Sbjct: 181 RRENRGKGKSERESKRKYQHGDDDRNRDRHITKKHDHGKHHDLESKERKEAKISLSSHHE 240
Query: 241 DSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
DSRLKKRRKRSLD QSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI
Sbjct: 241 DSRLKKRRKRSLDRQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDRI 300
Query: 301 GDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
GDFTNSSSSQYRRHSG TRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG
Sbjct: 301 GDFTNSSSSQYRRHSGLTRSGLGGYSPRKRRTESAVKTPPVRSPEKKNEGLDLLPAEKVG 360
Query: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSIQL 420
LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSL GKSLSG+SSNNLATKTNAS DSIQL
Sbjct: 361 LFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLTTGKSLSGISSNNLATKTNASFDSIQL 420
Query: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV
Sbjct: 421 TQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQALV 480
Query: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQTG 540
EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV TG
Sbjct: 481 EFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELV----------------------TG 540
Query: 541 DLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNIVA 600
DL+KSVAVVNKI+DVVEDSPNKII+AGISNRISSEM LKNIVA
Sbjct: 541 DLDKSVAVVNKINDVVEDSPNKIIIAGISNRISSEM------------------LKNIVA 600
Query: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIASLE 660
AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGG+VLKVFPAVPIASLE
Sbjct: 601 AFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGEVLKVFPAVPIASLE 660
Query: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV
Sbjct: 661 RNGCQPCYGIPEHVKPLLQQPTVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTV 720
Query: 721 KSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDNCPDATYQE 780
KSMNVAKPCTSCVSAEEEY+SICD+TDVEIKHEIQEISTIVISRND DHDDNC D TYQE
Sbjct: 721 KSMNVAKPCTSCVSAEEEYQSICDITDVEIKHEIQEISTIVISRNDTDHDDNCLDYTYQE 780
Query: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQSSPGNELHDV 840
QGNYPHNGRHKNEVVEDKLCHMGIKDATCFED+VCKSA ETIPRGCCDKQSSPGNELH V
Sbjct: 781 QGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDVVCKSALETIPRGCCDKQSSPGNELHGV 840
Query: 841 KVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENREKKERNNNLES 900
KVAKIIETGSDEKPVLLGDS+TVVADDEKKVLHGMDPMVRTDSDTSE REKKERNNNLES
Sbjct: 841 KVAKIIETGSDEKPVLLGDSSTVVADDEKKVLHGMDPMVRTDSDTSEKREKKERNNNLES 900
Query: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFSK 950
SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRF K
Sbjct: 901 SFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFPK 910
BLAST of Cp4.1LG17g02200 vs. ExPASy TrEMBL
Match:
A0A6J1C9Y6 (splicing factor U2af large subunit A OS=Momordica charantia OX=3673 GN=LOC111009561 PE=4 SV=1)
HSP 1 Score: 1283 bits (3320), Expect = 0.0
Identity = 715/959 (74.56%), Postives = 795/959 (82.90%), Query Frame = 0
Query: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAAN-DGGDT--GS 60
MST+SCSK+YSR+S K +LYN+NDESAARTRPFSFEDIMLRRKNK SAAN +GG T GS
Sbjct: 1 MSTHSCSKKYSRSSVKHTLYNTNDESAARTRPFSFEDIMLRRKNKGSAANVEGGATVAGS 60
Query: 61 HSRRESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIR 120
SRR+SID IT NRESER FRHSRGSSLDVQNLPLEESA+ISSRRKKEETLLKD+ V+R
Sbjct: 61 RSRRDSIDNDITDNRESERLFRHSRGSSLDVQNLPLEESAKISSRRKKEETLLKDSTVVR 120
Query: 121 SDRNNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAA 180
SDRNNY SGLTL+GK+K++TNGKDK QKYGQENLGWGK+D+R+RIDIENE+GKRHSRD A
Sbjct: 121 SDRNNYESGLTLMGKVKYETNGKDKGQKYGQENLGWGKSDQRTRIDIENESGKRHSRDLA 180
Query: 181 GKDRREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSS 240
GKDRREDRG+GK ERESKRKYQ+GDDD+NRDR+ KKHDH KH DLE+++RKEAK+ LSS
Sbjct: 181 GKDRREDRGRGKFERESKRKYQNGDDDKNRDRYSEKKHDHSKHRDLENRDRKEAKVSLSS 240
Query: 241 HHEDSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDS 300
H+EDSR K+RRKRS D +SKH++S SLSPR K STKL R KELP DSH+KKSGRW SDS
Sbjct: 241 HYEDSRFKRRRKRSQDRESKHRRSVSLSPRAHKHSTKLVRHKELP-DSHLKKSGRWRSDS 300
Query: 301 DRIGDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTP-PVRSPEKKNEGLDLLPA 360
DR GDFTNSS+SQYRRHSGST SGLGGYSPRKRRTESA+KTP PVRSPEKKNE LDLLPA
Sbjct: 301 DRTGDFTNSSTSQYRRHSGST-SGLGGYSPRKRRTESAIKTPSPVRSPEKKNEALDLLPA 360
Query: 361 EKVGLFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKT-NASV 420
+KVGLFSGSVTS FQPSNPTVSS IS D S GALFS AMGKSLSGVSSNNL KT N S+
Sbjct: 361 DKVGLFSGSVTSIFQPSNPTVSSVISTDQSSGALFSSAMGKSLSGVSSNNLPMKTANVSL 420
Query: 421 DSIQLTQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDR 480
D IQLTQATRPMRRLYIEN+PHS SEKA+I+C+NGFLTSSGVNHIEGTQPCISCIIHKDR
Sbjct: 421 DLIQLTQATRPMRRLYIENVPHSASEKAVIECMNGFLTSSGVNHIEGTQPCISCIIHKDR 480
Query: 481 GQALVEFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAI 540
GQALVEFLTPEDASAALSFDG++FSGSIL+IRRPKDYVE+V
Sbjct: 481 GQALVEFLTPEDASAALSFDGTNFSGSILKIRRPKDYVEIV------------------- 540
Query: 541 FMQTGDLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQL 600
TGDL+KS AVVN+ISDVVEDSPNKI +AGISNRISSEM L
Sbjct: 541 ---TGDLDKSEAVVNEISDVVEDSPNKIFIAGISNRISSEM------------------L 600
Query: 601 KNIVAAFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVP 660
++IV +FGPLKAYHFEIN DLNEPCAFLEYVDQSVMPKACAGLNGMKIGG+VLKVF AVP
Sbjct: 601 RDIVTSFGPLKAYHFEINGDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGEVLKVFSAVP 660
Query: 661 IASLERNGCQPCYGIPEHVKPLLQQPTVVLKVN-VFNADVLPLLSESDINEVLEDIRFEC 720
A LERNGCQPCYGIPEHVKPLLQQPTVVLK+N VF ADVLP+LSES+I+EVLEDIRFEC
Sbjct: 661 FAPLERNGCQPCYGIPEHVKPLLQQPTVVLKLNNVFGADVLPVLSESNIDEVLEDIRFEC 720
Query: 721 ARFGTVKSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDNCP 780
ARFGTVKSMNV KPC S V AEE+YK+ DVEIKH IQ ST+V SRNDND +D+
Sbjct: 721 ARFGTVKSMNVVKPCNSFVGAEEKYKN---TNDVEIKHGIQGNSTLVPSRNDNDLEDD-- 780
Query: 781 DATYQEQGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQSSPG 840
+A ++ NEVVE+KLC MG DA CFED+ C++ E+IP G +QSSPG
Sbjct: 781 EANLNDR---------PNEVVENKLCQMGNDDAPCFEDVACENTLESIPGGIPGRQSSPG 840
Query: 841 NELHDVKVAKIIET---GSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENREK 900
NEL D VA+++ET GSD K +LL DSTTV AD +KKVL+G+D MVRTDSD E EK
Sbjct: 841 NELRDTNVAEMVETDEKGSDNKSMLLDDSTTVGADSKKKVLNGLDAMVRTDSDAFEKVEK 900
Query: 901 KERNNNLESSFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFSK 950
K+ NL F +GSVFVEFGR+EASCMAAHSLHGRIYDGQEI +EYIPHDLY KRF K
Sbjct: 901 KDPRTNL---FVLGSVFVEFGRMEASCMAAHSLHGRIYDGQEICIEYIPHDLYRKRFPK 900
BLAST of Cp4.1LG17g02200 vs. ExPASy TrEMBL
Match:
A0A6J1H6S0 (splicing factor U2af large subunit B-like OS=Cucurbita moschata OX=3662 GN=LOC111460135 PE=4 SV=1)
HSP 1 Score: 1214 bits (3140), Expect = 0.0
Identity = 679/959 (70.80%), Postives = 761/959 (79.35%), Query Frame = 0
Query: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAAN-DGGDTGSHS 60
MS+YS SK YSR S KQ+L NSNDESAARTRP SFEDIMLRRKNK SA + G TGSHS
Sbjct: 1 MSSYSFSKHYSRRSKKQTLSNSNDESAARTRPLSFEDIMLRRKNKGSADTVEVGVTGSHS 60
Query: 61 RRESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSD 120
RRESIDK T N SERHFRH +G+SLDVQNL LEES + SSRRKKEETLLKDNM +RSD
Sbjct: 61 RRESIDKLSTDNCASERHFRHGKGASLDVQNLSLEESGKDSSRRKKEETLLKDNMEVRSD 120
Query: 121 RNNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGK 180
RNNY S LTL+GKLK+D NG DK+QKYGQEN+G GK ++ SR+DIE ETGKRHSRD+ K
Sbjct: 121 RNNYDSELTLMGKLKYDANGNDKKQKYGQENVGRGKKNQSSRVDIEKETGKRHSRDSKAK 180
Query: 181 DRREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHH 240
RED G+G ER KRK Q+GDD+ NRD++ +K+HDHGKHHD E++ERKEAK L+S++
Sbjct: 181 --REDLGRGNFERGGKRKDQNGDDEGNRDKYAAKRHDHGKHHDPENRERKEAKASLTSNY 240
Query: 241 EDSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDR 300
EDSRL++RRKRS D +SKH++S SLSPRP K S+KL RQKELPLDSHVKKSGRW SDSDR
Sbjct: 241 EDSRLQRRRKRSQDRESKHRRSVSLSPRPHKHSSKLVRQKELPLDSHVKKSGRWRSDSDR 300
Query: 301 IGDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTP-PVRSPEKKNEGLDLLPAEK 360
GD TNSS+SQYRRH GST SGLGGYSPRKRRTESA+KTP PV+SPEKK+EGLD+ P EK
Sbjct: 301 TGDLTNSSNSQYRRHFGST-SGLGGYSPRKRRTESAIKTPSPVQSPEKKDEGLDVPPTEK 360
Query: 361 VGLFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSI 420
+GLFS S+ SNFQPSN TVSSGI N SGGA+FS +GKSL+GVSSNN+ KTN S+D I
Sbjct: 361 IGLFSSSINSNFQPSNATVSSGIINVQSGGAIFSSVIGKSLTGVSSNNIEMKTNVSLDLI 420
Query: 421 QLTQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQA 480
QLTQATRPMRRLYIENLPHS SEKAIIDCLNGFLTSSGVNHI+GT PCISCIIHKDRGQA
Sbjct: 421 QLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGVNHIKGTLPCISCIIHKDRGQA 480
Query: 481 LVEFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQ 540
LVEFLTPEDASAALSFDGSDFSGSIL+IRRPKDYVE+V
Sbjct: 481 LVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYVEIV---------------------- 540
Query: 541 TGDLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNI 600
TG L+KSVAVVNKI D VEDSPNKI +AGISNRISSEM L++I
Sbjct: 541 TGGLDKSVAVVNKIIDTVEDSPNKIFIAGISNRISSEM------------------LRDI 600
Query: 601 VAAFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIAS 660
V AFGPLKA+HFE+N+DLNE CAFLEYVDQS++ KACAGLNGMKIGG+VLKVFPAVP S
Sbjct: 601 VTAFGPLKAFHFEMNDDLNERCAFLEYVDQSIVSKACAGLNGMKIGGEVLKVFPAVPFTS 660
Query: 661 LERNGCQPCYGIPEHVKPLLQQPTVVLKVN-VFNADVLPLLSESDINEVLEDIRFECARF 720
LERN CQP YGIPEHVKPLLQQPTVVLKVN VFNADVLP+LSE+DI+EVLEDIR ECARF
Sbjct: 661 LERNECQPWYGIPEHVKPLLQQPTVVLKVNNVFNADVLPVLSEADIDEVLEDIRVECARF 720
Query: 721 GTVKSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDN----- 780
GTVKSMN KPC C SAEE+YK+I D+TDVEIKHEIQE T+ ISRN ND +DN
Sbjct: 721 GTVKSMNFVKPCNGCFSAEEDYKNISDITDVEIKHEIQENCTMAISRNGNDVEDNNVNLD 780
Query: 781 -CPDATYQEQGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQS 840
CP+ T Q QGN P NGRH++EV E KLC MG DAT FE + C++ASE IPRG ++QS
Sbjct: 781 NCPNDTNQRQGNCPGNGRHQDEV-EVKLCRMGQDDATRFEIVACENASERIPRGLSEQQS 840
Query: 841 SPGNELHDVKVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENREK 900
SPGN+ D KVA+ IET ++ D+K V MVRTD DTSE EK
Sbjct: 841 SPGNQHQDAKVAETIETNE-------------ISPDKKSVCIDDSAMVRTDFDTSEKSEK 900
Query: 901 KERNNNLESSFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRFSK 950
+ NNL S F +GSVFVEFGR EASCMAAHSLHGRIYDGQEIS+EYIPHDLY KRF K
Sbjct: 901 DDPRNNLASLFVLGSVFVEFGRTEASCMAAHSLHGRIYDGQEISIEYIPHDLYRKRFPK 902
BLAST of Cp4.1LG17g02200 vs. ExPASy TrEMBL
Match:
A0A6J1L124 (splicing factor U2af large subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC111498921 PE=4 SV=1)
HSP 1 Score: 1213 bits (3138), Expect = 0.0
Identity = 684/962 (71.10%), Postives = 760/962 (79.00%), Query Frame = 0
Query: 1 MSTYSCSKQYSRTSAKQSLYNSNDESAARTRPFSFEDIMLRRKNKESAAN-DGGDTGSHS 60
MS++S SK YSR S KQ+L NSNDESAARTRP SFEDIMLRRKNK SA + G TGSHS
Sbjct: 1 MSSFSFSKHYSRRSKKQTLSNSNDESAARTRPLSFEDIMLRRKNKGSADTVEVGVTGSHS 60
Query: 61 RRESIDKHITANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEETLLKDNMVIRSD 120
RRESIDK T N SERHFRH +G+S DVQNL LEES + SSRRKKEETLLKDNM RSD
Sbjct: 61 RRESIDKLSTDNCASERHFRHGKGASPDVQNLSLEESGKDSSRRKKEETLLKDNMEFRSD 120
Query: 121 RNNYGSGLTLIGKLKHDTNGKDKRQKYGQENLGWGKNDERSRIDIENETGKRHSRDAAGK 180
RNNY S LTL+GKLK+D NG DK+QKYG EN+G GKN++ SR+DIE ETGKRHSRD+ K
Sbjct: 121 RNNYDSELTLMGKLKYDANGNDKKQKYGLENVGRGKNNQSSRVDIEKETGKRHSRDS--K 180
Query: 181 DRREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLSSHH 240
RRED G+GK ER KRK Q+GDD+ NRD++ +K+HDHGKHHD E++ERKEAK L+S++
Sbjct: 181 ARREDLGRGKFERGGKRKDQNGDDEGNRDKYAAKRHDHGKHHDPENRERKEAKGSLTSNY 240
Query: 241 EDSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSDSDR 300
EDSRLKKRRKRS D +SKH+ +SPRP K STKLARQKELPLDS+VKKSGRW SDSDR
Sbjct: 241 EDSRLKKRRKRSQDRESKHR----ISPRPHKHSTKLARQKELPLDSNVKKSGRWRSDSDR 300
Query: 301 IGDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTP-PVRSPEKKNEGLDLLPAEK 360
GD TNSS+SQYRR SGST SGLGGYSPRKRRTESAVKTP PV+SPEKK+EGLDL P EK
Sbjct: 301 TGDLTNSSNSQYRRQSGST-SGLGGYSPRKRRTESAVKTPSPVQSPEKKDEGLDLPPTEK 360
Query: 361 VGLFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNASVDSI 420
+GLFS S+ SNFQPSN TVSSGI N SGGA+FS +G+SLSGVSSNN+ KTN S+D I
Sbjct: 361 IGLFSSSINSNFQPSNTTVSSGIINVQSGGAIFSSVIGRSLSGVSSNNIEMKTNVSLDLI 420
Query: 421 QLTQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKDRGQA 480
QLTQATRPMRRLYIENLPHS SEKAIIDCLNGFLTSSG+NHI+GT PCISCIIHKDRGQA
Sbjct: 421 QLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLTSSGINHIKGTLPCISCIIHKDRGQA 480
Query: 481 LVEFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNRGGFQTVAIFMQ 540
LVEFLTPEDASAALSFDGSDFSGSIL+IRRPKDYVE+V
Sbjct: 481 LVEFLTPEDASAALSFDGSDFSGSILKIRRPKDYVEIV---------------------- 540
Query: 541 TGDLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFSLCCVHSGDYFFNVILQLKNI 600
TG L+KSVAVVNKI D VEDSPNKI +AGISNRISSEM L++I
Sbjct: 541 TGGLDKSVAVVNKIIDTVEDSPNKIFIAGISNRISSEM------------------LRDI 600
Query: 601 VAAFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAVPIAS 660
V AFGPLKAYHFE+N+DLNE CAFLEYVDQS++ KACAGLNGMKIGG+VLKVFPAVP
Sbjct: 601 VTAFGPLKAYHFEMNDDLNERCAFLEYVDQSIVSKACAGLNGMKIGGEVLKVFPAVPFTP 660
Query: 661 LERNGCQPCYGIPEHVKPLLQQPTVVLKVN-VFNADVLPLLSESDINEVLEDIRFECARF 720
LERN CQP YGIPEHVKPLLQQPTVVLKVN VFNADVLP+LSE+DI+EVLEDIR ECARF
Sbjct: 661 LERNECQPWYGIPEHVKPLLQQPTVVLKVNNVFNADVLPVLSEADIDEVLEDIRVECARF 720
Query: 721 GTVKSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDN----- 780
GTVKSMN KPC C SAEE+YK+I D+TDVEIKHEIQE T+ ISRN ND +DN
Sbjct: 721 GTVKSMNFVKPCNGCFSAEEDYKNISDITDVEIKHEIQENCTMAISRNGNDVEDNNVNLD 780
Query: 781 -CPDATYQEQGNYPHNGRHKNEVVEDKLCHMGIKDATCFEDIVCKSASETIPRGCCDKQS 840
CP+ T Q QGN P NGRH +EVVEDKLC MG DAT FE + C++ASE PRG ++QS
Sbjct: 781 NCPNGTNQRQGNCPGNGRHHDEVVEDKLCRMGQDDATRFEIVACENASERNPRGLSEQQS 840
Query: 841 SPGNELHDVKVAKIIETGS---DEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSEN 900
SPGN+ D KVA+ IET D+K V L DS MVRTDSDTS
Sbjct: 841 SPGNQHRDAKVAETIETNEISPDKKSVCLNDSA----------------MVRTDSDTSAK 899
Query: 901 REKKERNNNLESSFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRF 950
+K +R NNL S F +GSVFVEFGR EASCMAAHSLHGRIYDGQEIS+EYIPHDLY KRF
Sbjct: 901 SKKGDRRNNLASLFVLGSVFVEFGRTEASCMAAHSLHGRIYDGQEISIEYIPHDLYRKRF 899
BLAST of Cp4.1LG17g02200 vs. TAIR 10
Match:
AT2G33435.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 215.3 bits (547), Expect = 2.1e-55
Identity = 172/473 (36.36%), Postives = 256/473 (54.12%), Query Frame = 0
Query: 70 ANRESERHFRHSRGSSLDVQNLPLEESARISSRRKKEE---TLLKDNMVIRSDRNNYGSG 129
++R+ E SR +LD Q ++ S+R++K E + + + ++ G
Sbjct: 521 SSRKKEEAISSSREENLDKQ----KKDESTSNRKRKAEGECSTAETESIEEHSKDRRGK- 580
Query: 130 LTLIGKLKHDTNGKDKR--QKYGQENLGWGKNDE--------RSRIDIENETGKRHSRDA 189
K + ++N +++R +K +E+L + E ++ D + K+ R
Sbjct: 581 -----KEETNSNCREERRDKKMKKEDLASNRKIEGEIPTTETKTMTDRDGLCSKKRLRSL 640
Query: 190 AGKDRREDRGKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHHDLESKERKEAKILLS 249
D D K + KRK Q+G+ +NR+ ++SK+HD GK H +E ER E +
Sbjct: 641 VVADVPRDESSIKPDNGDKRKNQNGNHKKNREINMSKRHDPGKVHSVEVSERWERREQPK 700
Query: 250 SHHEDSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELPLDSHVKKSGRWHSD 309
S D R K+RR RS DH +K S PR K++++ R E ++ VK H
Sbjct: 701 SRQRDLREKRRRSRSRDHGQDRQKRSSPLPRAEKATSRHKRNHEERSENVVKDRSGKHHC 760
Query: 310 SDRIGDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVK--TPPVRSPEKKNEGLDLL 369
+D T++ S++ RR+S S +S LGGYSPRKRR +++ K +PP S EKK+ L
Sbjct: 761 NDNEDKVTSTVSNKSRRYSAS-KSELGGYSPRKRREQASTKAASPPNLSSEKKSAKWGLA 820
Query: 370 PAEKVGLFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKSLSGVSSNNLATKTNAS 429
G+FS SV S Q + T IS A +L + + S
Sbjct: 821 ATVTAGMFSDSVFSGLQAATQTAYPTISE-----ASLTLLKPLMVMDAPFRTPPARQTTS 880
Query: 430 VDSIQLTQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVNHIEGTQPCISCIIHKD 489
DS+QLT++TR MRRLY EN+P S SEK++I+C NG++ SSG NHI+G++PCISCII+K+
Sbjct: 881 FDSVQLTESTRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCISCIINKE 940
Query: 490 RGQALVEFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMKLSYIFFSNR 528
+ QALVEFLTP+DASAALS DG F+GS L+IRRPKDYV + + F N+
Sbjct: 941 KSQALVEFLTPQDASAALSLDGCSFAGSNLKIRRPKDYVRTTVSSIMVVFYNQ 977
BLAST of Cp4.1LG17g02200 vs. TAIR 10
Match:
AT2G33440.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 191.8 bits (486), Expect = 2.5e-48
Identity = 125/358 (34.92%), Postives = 187/358 (52.23%), Query Frame = 0
Query: 595 LKNIVAAFGPLKAYHFEINNDLNEPCAFLEYVDQSVMPKACAGLNGMKIGGQVLKVFPAV 654
L IV+ FGPLKAY F NNDLN+ CAFLEY D SV KACAGLNGM++GG V+ A
Sbjct: 2 LMEIVSVFGPLKAYRFVSNNDLNQRCAFLEYTDGSVTLKACAGLNGMRLGGSVITAVCAF 61
Query: 655 PIA-SLERNGCQPCYGIPEHVKPLLQQPTVVLKV-NVFNADVLPLLSESDINEVLEDIRF 714
P A S+ N P YGIP H KPLL +P +LK+ NV + + L SE ++ E+LED+R
Sbjct: 62 PDASSVAVNENPPFYGIPSHAKPLLGKPKNILKLKNVVDPEDLTSFSEQEVKEILEDVRL 121
Query: 715 ECARFGTVKSMNVAKPCTSCVSAEEEYKSICDVTDVEIKHEIQEISTIVISRNDNDHDDN 774
ECARFG +KS+N+ + + ++ E + ++ + K E++ VI D
Sbjct: 122 ECARFGVIKSINILEHKSKDITVSET-NPLLNLESTDSK----EMNVSVIEEKD------ 181
Query: 775 CPDATYQEQGNYPHNGRHKNEVVEDK--LCHMGIKDATCFEDIVCKSASETIPRGCCDKQ 834
G K E + D L + + D+ ED +C+ S+T +
Sbjct: 182 --------------EGSEKAEDIADNVDLAEVVMPDSLTGEDKLCEPCSDT----AAETS 241
Query: 835 SSPGNELHDVKVAKIIETGSDEKPVLLGDSTTVVADDEKKVLHGMDPMVRTDSDTSENRE 894
+ +LH T + ++ +S A++ ++V R D+ ++
Sbjct: 242 TQENEDLH--------STEQEHCEKIVEESAQAEAENPQEVASVRTVKTRWDAG---DKI 301
Query: 895 KKERNNNLESSFAVGSVFVEFGRLEASCMAAHSLHGRIYDGQEISVEYIPHDLYHKRF 949
++E+ + E F G +F+E+ R EA+C AAHSLHGR+YD + + EY+ +LY RF
Sbjct: 302 EEEQEEDPEDVFETGCIFIEYRRPEATCDAAHSLHGRLYDNRIVKAEYVSKELYQIRF 319
BLAST of Cp4.1LG17g02200 vs. TAIR 10
Match:
AT4G36690.4 (U2 snRNP auxilliary factor, large subunit, splicing factor )
HSP 1 Score: 94.4 bits (233), Expect = 5.4e-19
Identity = 128/534 (23.97%), Postives = 216/534 (40.45%), Query Frame = 0
Query: 223 LESKERKEAKILLSSHHEDSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKELP 282
L+SK ++E++ H ++ K R+R ++ +S R
Sbjct: 33 LDSKPKRESR----DHERETSRSKDREREKGRDKDRERDSEVSRR--------------S 92
Query: 283 LDSHVKKSGRWHSDSDRIGDFTNSSSSQYRRHS---GSTRSGLGGYSPRKRRTES---AV 342
D +KS D DR + SS++R HS G R GG R+ R+ S +
Sbjct: 93 RDRDGEKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERGGGRRSRRSRSRSKDRSE 152
Query: 343 KTPPVRSPEKKNE---GLDLLPAEKVGLFSGSVTSNFQPSNPTVSSGISNDPSGGALFSL 402
+ RSP K + G D+ P L +G+ + P P G P+ +F L
Sbjct: 153 RRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAGMFPN---MFPL 212
Query: 403 AMGKSLSGVSSNNLATKTNASVDSIQLTQATRPMRRLYIENLPHSPSEKAIIDCLNGFLT 462
G+S G+S + T QATR RR+Y+ L + +E+++ + +
Sbjct: 213 PTGQSFGGLSMMPIQAMTQ---------QATRHARRVYVGGLSPTANEQSVATFFSQVMA 272
Query: 463 SSGVNHIEGTQPCISCIIHKDRGQALVEFLTPEDASAALSFDGSDFSGSILRIRRPKDYV 522
+ G N ++ I+ ++ A VE + E+AS A+S DG F G+ +++RRP DY
Sbjct: 273 AVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDY- 332
Query: 523 ELVMKLSYIFFSNRGGFQTVAIFMQTGDLEKSVAVVNKISDVVEDSPNKIIVAGISNRIS 582
N T+ + L + + + + P++I V G+
Sbjct: 333 ------------NPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGL----- 392
Query: 583 SEMFSLCCVHSGDYFFNVILQLKNIVAAFGPLKAYHFEINNDL--NEPCAFLEYVDQSVM 642
Y+F Q++ ++ +FG LK + + + ++ AF Y D SV
Sbjct: 393 ------------PYYFTE-SQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVT 452
Query: 643 PKACAGLNGMKIGGQVLKVFPAVPIASLERNGCQPCYGIPEHVKPLLQ------------ 702
ACA LNG+K+G + L V A L++ PE LL
Sbjct: 453 DIACAALNGIKMGDKTLTVRRANQGTMLQK---------PEQENVLLHAQQQIAFQRVML 494
Query: 703 QP-----TVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTVKSMNVAKP 729
QP TVV V D L + + +++ED+R E +FG + ++ + +P
Sbjct: 513 QPGAVATTVVCLTQVVTED--ELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRP 494
BLAST of Cp4.1LG17g02200 vs. TAIR 10
Match:
AT4G36690.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )
HSP 1 Score: 82.0 bits (201), Expect = 2.8e-15
Identity = 139/589 (23.60%), Postives = 237/589 (40.24%), Query Frame = 0
Query: 163 DIENETGKRHSRDAAGKDRREDR-GKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHH 222
+ E+ G DA + R G+ + + +SK K + D +R R ++ + G+
Sbjct: 3 EFEDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDK 62
Query: 223 DLESKERKEAKILLSSHHEDSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKEL 282
D E +++++ S D +K ++RS D H++ S R S + ++E
Sbjct: 63 DRE----RDSEVSRRSRDRDG--EKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRE- 122
Query: 283 PLDSHVKKSGRWHSDSDRIGDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPV 342
+ GR D R D + R S RS +RRT S
Sbjct: 123 -------RGGRDDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRS------- 182
Query: 343 RSPEKKNE---GLDLLPAEKVGLFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKS 402
RSP K + G D+ P L +G+ + P P G P+ +F L G+S
Sbjct: 183 RSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAGMFPN---MFPLPTGQS 242
Query: 403 LSGVSSNNLATKTNASVDSIQLTQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVN 462
G+S + T QATR RR+Y+ L + +E+++ + + + G N
Sbjct: 243 FGGLSMMPIQAMTQ---------QATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGN 302
Query: 463 HIEGTQPCISCIIHKDRGQALVEFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMK 522
++ I+ ++ A VE + E+AS A+S DG F G+ +++RRP DY
Sbjct: 303 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDY------ 362
Query: 523 LSYIFFSNRGGFQTVAIFMQTGDLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFS 582
N T+ + L + + + + P++I V G+
Sbjct: 363 -------NPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGL---------- 422
Query: 583 LCCVHSGDYFFNVILQLKNIVAAFGPLKAYHFEINNDL--NEPCAFLEYVDQSVMPKACA 642
Y+F Q++ ++ +FG LK + + + ++ AF Y D SV ACA
Sbjct: 423 -------PYYFTE-SQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACA 482
Query: 643 GLNGMKIGGQVLKVFPAVPIASLERNGCQPCYGIPEHVKPLLQ------------QP--- 702
LNG+K+G + L V A L++ PE LL QP
Sbjct: 483 ALNGIKMGDKTLTVRRANQGTMLQK---------PEQENVLLHAQQQIAFQRVMLQPGAV 516
Query: 703 --TVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFGTVKSMNVAKP 729
TVV V D L + + +++ED+R E +FG + ++ + +P
Sbjct: 543 ATTVVCLTQVVTED--ELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRP 516
BLAST of Cp4.1LG17g02200 vs. TAIR 10
Match:
AT4G36690.2 (U2 snRNP auxilliary factor, large subunit, splicing factor )
HSP 1 Score: 78.2 bits (191), Expect = 4.0e-14
Identity = 138/579 (23.83%), Postives = 231/579 (39.90%), Query Frame = 0
Query: 163 DIENETGKRHSRDAAGKDRREDR-GKGKSERESKRKYQHGDDDRNRDRHISKKHDHGKHH 222
+ E+ G DA + R G+ + + +SK K + D +R R ++ + G+
Sbjct: 3 EFEDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDK 62
Query: 223 DLESKERKEAKILLSSHHEDSRLKKRRKRSLDHQSKHKKSGSLSPRPPKSSTKLARQKEL 282
D E +++++ S D +K ++RS D H++ S R S + ++E
Sbjct: 63 DRE----RDSEVSRRSRDRDG--EKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRE- 122
Query: 283 PLDSHVKKSGRWHSDSDRIGDFTNSSSSQYRRHSGSTRSGLGGYSPRKRRTESAVKTPPV 342
+ GR D R D + R S RS +RRT S
Sbjct: 123 -------RGGRDDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRS------- 182
Query: 343 RSPEKKNE---GLDLLPAEKVGLFSGSVTSNFQPSNPTVSSGISNDPSGGALFSLAMGKS 402
RSP K + G D+ P L +G+ + P P G P+ +F L G+S
Sbjct: 183 RSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAGMFPN---MFPLPTGQS 242
Query: 403 LSGVSSNNLATKTNASVDSIQLTQATRPMRRLYIENLPHSPSEKAIIDCLNGFLTSSGVN 462
G+S + T QATR RR+Y+ L + +E+++ + + + G N
Sbjct: 243 FGGLSMMPIQAMTQ---------QATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGN 302
Query: 463 HIEGTQPCISCIIHKDRGQALVEFLTPEDASAALSFDGSDFSGSILRIRRPKDYVELVMK 522
++ I+ ++ A VE + E+AS A+S DG F G+ +++RRP DY
Sbjct: 303 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDY------ 362
Query: 523 LSYIFFSNRGGFQTVAIFMQTGDLEKSVAVVNKISDVVEDSPNKIIVAGISNRISSEMFS 582
N T+ + L + + + + P++I V G+
Sbjct: 363 -------NPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGL---------- 422
Query: 583 LCCVHSGDYFFNVILQLKNIVAAFGPLKAYHFEINNDL--NEPCAFLEYVDQSVMPKACA 642
Y+F Q++ ++ +FG LK + + + ++ AF Y D SV ACA
Sbjct: 423 -------PYYFTE-SQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACA 482
Query: 643 GLNGMKIGGQVLKVFPAVPIASLERNGCQPCYGIPEHVKPLLQ------------QP--- 702
LNG+K+G + L V A L++ PE LL QP
Sbjct: 483 ALNGIKMGDKTLTVRRANQGTMLQK---------PEQENVLLHAQQQIAFQRVMLQPGAV 506
Query: 703 --TVVLKVNVFNADVLPLLSESDINEVLEDIRFECARFG 719
TVV V D L + + +++ED+R E +FG
Sbjct: 543 ATTVVCLTQVVTED--ELRDDEEYGDIMEDMRQEGGKFG 506
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P26369 | 1.1e-29 | 30.22 | Splicing factor U2AF 65 kDa subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=3 | [more] |
Q24562 | 3.3e-29 | 28.44 | Splicing factor U2AF 50 kDa subunit OS=Drosophila melanogaster OX=7227 GN=U2af50... | [more] |
P26368 | 4.3e-29 | 29.72 | Splicing factor U2AF 65 kDa subunit OS=Homo sapiens OX=9606 GN=U2AF2 PE=1 SV=4 | [more] |
P90978 | 2.8e-28 | 27.92 | Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis elegans OX=6239 GN=uaf-1 P... | [more] |
P90727 | 3.6e-28 | 28.10 | Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis briggsae OX=6238 GN=uaf-1 ... | [more] |
Match Name | E-value | Identity | Description | |
XP_023514084.1 | 0.0 | 95.79 | splicing factor U2af large subunit A [Cucurbita pepo subsp. pepo] >XP_023514085.... | [more] |
XP_022964139.1 | 0.0 | 94.00 | splicing factor U2af large subunit A-like [Cucurbita moschata] >XP_022964140.1 s... | [more] |
KAG6593827.1 | 0.0 | 93.89 | Splicing factor U2AF 65 kDa subunit, partial [Cucurbita argyrosperma subsp. soro... | [more] |
KAG7026156.1 | 0.0 | 91.41 | Splicing factor U2AF 65 kDa subunit [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_023000460.1 | 0.0 | 92.63 | splicing factor U2af large subunit A-like [Cucurbita maxima] >XP_023000461.1 spl... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HJZ8 | 0.0 | 94.00 | splicing factor U2af large subunit A-like OS=Cucurbita moschata OX=3662 GN=LOC11... | [more] |
A0A6J1KDP6 | 0.0 | 92.63 | splicing factor U2af large subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
A0A6J1C9Y6 | 0.0 | 74.56 | splicing factor U2af large subunit A OS=Momordica charantia OX=3673 GN=LOC111009... | [more] |
A0A6J1H6S0 | 0.0 | 70.80 | splicing factor U2af large subunit B-like OS=Cucurbita moschata OX=3662 GN=LOC11... | [more] |
A0A6J1L124 | 0.0 | 71.10 | splicing factor U2af large subunit B-like OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
Match Name | E-value | Identity | Description | |
AT2G33435.1 | 2.1e-55 | 36.36 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT2G33440.1 | 2.5e-48 | 34.92 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G36690.4 | 5.4e-19 | 23.97 | U2 snRNP auxilliary factor, large subunit, splicing factor | [more] |
AT4G36690.1 | 2.8e-15 | 23.60 | U2 snRNP auxilliary factor, large subunit, splicing factor | [more] |
AT4G36690.2 | 4.0e-14 | 23.83 | U2 snRNP auxilliary factor, large subunit, splicing factor | [more] |