Cp4.1LG17g00620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATCTCACGCGTTTTTTCCTTCCTCGCGGCCTCCGCCATTATCGCTGCTCACTTTTTGCTCTCATCGGCGATGGCCGTCGATTTCTCCGGCGGTGACAAACTCCTCTTCGTTCCGGCTGAATCCAAGTGCAGAGGCTCCATCGCTGAATGCTTTCTCGCCGGAGATGACAATGATTCCGCCTTCGGAATGGAGTTCGAGATGGACTCTGAGATCAATCGCCGAATTCTAGCGTCTTCTCGCTACCTGAGCTATGGCGCTTTGAAAAGGAACAGCGTTCCTTGCTCTCGCCGCGGTGCTTCTTACTACAACTGCCAGCCTGGCGCTCAGGCCAATCCTTACAGACGCGGTTGCAACGCCATTACTCGCTGCCGGAGTTAA ATGGAAATCTCACGCGTTTTTTCCTTCCTCGCGGCCTCCGCCATTATCGCTGCTCACTTTTTGCTCTCATCGGCGATGGCCGTCGATTTCTCCGGCGGTGACAAACTCCTCTTCGTTCCGGCTGAATCCAAGTGCAGAGGCTCCATCGCTGAATGCTTTCTCGCCGGAGATGACAATGATTCCGCCTTCGGAATGGAGTTCGAGATGGACTCTGAGATCAATCGCCGAATTCTAGCGTCTTCTCGCTACCTGAGCTATGGCGCTTTGAAAAGGAACAGCGTTCCTTGCTCTCGCCGCGGTGCTTCTTACTACAACTGCCAGCCTGGCGCTCAGGCCAATCCTTACAGACGCGGTTGCAACGCCATTACTCGCTGCCGGAGTTAA ATGGAAATCTCACGCGTTTTTTCCTTCCTCGCGGCCTCCGCCATTATCGCTGCTCACTTTTTGCTCTCATCGGCGATGGCCGTCGATTTCTCCGGCGGTGACAAACTCCTCTTCGTTCCGGCTGAATCCAAGTGCAGAGGCTCCATCGCTGAATGCTTTCTCGCCGGAGATGACAATGATTCCGCCTTCGGAATGGAGTTCGAGATGGACTCTGAGATCAATCGCCGAATTCTAGCGTCTTCTCGCTACCTGAGCTATGGCGCTTTGAAAAGGAACAGCGTTCCTTGCTCTCGCCGCGGTGCTTCTTACTACAACTGCCAGCCTGGCGCTCAGGCCAATCCTTACAGACGCGGTTGCAACGCCATTACTCGCTGCCGGAGTTAA MEISRVFSFLAASAIIAAHFLLSSAMAVDFSGGDKLLFVPAESKCRGSIAECFLAGDDNDSAFGMEFEMDSEINRRILASSRYLSYGALKRNSVPCSRRGASYYNCQPGAQANPYRRGCNAITRCRS Homology
BLAST of Cp4.1LG17g00620 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 6.2e-32 Identity = 73/113 (64.60%), Postives = 85/113 (75.22%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 7.5e-30 Identity = 72/129 (55.81%), Postives = 91/129 (70.54%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.1e-28 Identity = 63/113 (55.75%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.0e-26 Identity = 67/121 (55.37%), Postives = 79/121 (65.29%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.3e-25 Identity = 58/85 (68.24%), Postives = 66/85 (77.65%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. NCBI nr
Match: XP_022930438.1 (protein RALF-like 33 [Cucurbita moschata] >XP_023514647.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 253 bits (647), Expect = 6.57e-85 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. NCBI nr
Match: KAG6593968.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026310.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 252 bits (644), Expect = 1.89e-84 Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. NCBI nr
Match: XP_023000591.1 (protein RALF-like 33 [Cucurbita maxima]) HSP 1 Score: 248 bits (633), Expect = 8.99e-83 Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. NCBI nr
Match: XP_038875155.1 (protein RALF-like 33 [Benincasa hispida]) HSP 1 Score: 213 bits (543), Expect = 4.77e-69 Identity = 105/127 (82.68%), Postives = 117/127 (92.13%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. NCBI nr
Match: XP_022138421.1 (protein RALF-like 33 [Momordica charantia]) HSP 1 Score: 205 bits (521), Expect = 1.01e-65 Identity = 105/127 (82.68%), Postives = 111/127 (87.40%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. ExPASy TrEMBL
Match: A0A6J1EV64 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111436882 PE=3 SV=1) HSP 1 Score: 253 bits (647), Expect = 3.18e-85 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. ExPASy TrEMBL
Match: A0A6J1KG89 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1) HSP 1 Score: 248 bits (633), Expect = 4.35e-83 Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. ExPASy TrEMBL
Match: A0A6J1C9N4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1) HSP 1 Score: 205 bits (521), Expect = 4.89e-66 Identity = 105/127 (82.68%), Postives = 111/127 (87.40%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. ExPASy TrEMBL
Match: A0A6J1H3W7 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1) HSP 1 Score: 204 bits (520), Expect = 7.42e-66 Identity = 96/127 (75.59%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. ExPASy TrEMBL
Match: A0A6J1KVY0 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1) HSP 1 Score: 202 bits (513), Expect = 8.65e-65 Identity = 95/127 (74.80%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 ) HSP 1 Score: 138.3 bits (347), Expect = 4.4e-33 Identity = 73/113 (64.60%), Postives = 85/113 (75.22%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 ) HSP 1 Score: 131.3 bits (329), Expect = 5.3e-31 Identity = 72/129 (55.81%), Postives = 91/129 (70.54%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 ) HSP 1 Score: 118.6 bits (296), Expect = 3.6e-27 Identity = 67/121 (55.37%), Postives = 79/121 (65.29%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 ) HSP 1 Score: 115.9 bits (289), Expect = 2.3e-26 Identity = 58/85 (68.24%), Postives = 66/85 (77.65%), Query Frame = 0
BLAST of Cp4.1LG17g00620 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 ) HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17 Identity = 41/71 (57.75%), Postives = 55/71 (77.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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