Cp4.1LG17g00170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTATGATGAAGAGGACCCTTCTTCTCTTTGCCGTCTTCTTGCTGCTCGTGTTTACAGATGCGACCATGCACAACGTGGTTAAGAAGAAAGATGCGCGTAAGCTAGCTCAAAGCTTTAGTGGTCAAATCCCTAAAACGGGAGTGTTCGGTGGTGTGAAATATTCTGAAGATGCTGATGTTGCTCAAGCTGACGTTGGCATGAACAACAACGAAGATGAGGACGATGAAAATCTTGGTTATAAAAACTACGGAAAGGGTTCGGATACCGAAACTCACCGTTACTTCTCAAGTGAGAAGCCATACAGACCCTAA ATGACTATGATGAAGAGGACCCTTCTTCTCTTTGCCGTCTTCTTGCTGCTCGTGTTTACAGATGCGACCATGCACAACGTGGTTAAGAAGAAAGATGCGCGTAAGCTAGCTCAAAGCTTTAGTGGTCAAATCCCTAAAACGGGAGTGTTCGGTGGTGTGAAATATTCTGAAGATGCTGATGTTGCTCAAGCTGACGTTGGCATGAACAACAACGAAGATGAGGACGATGAAAATCTTGGTTATAAAAACTACGGAAAGGGTTCGGATACCGAAACTCACCGTTACTTCTCAAGTGAGAAGCCATACAGACCCTAA ATGACTATGATGAAGAGGACCCTTCTTCTCTTTGCCGTCTTCTTGCTGCTCGTGTTTACAGATGCGACCATGCACAACGTGGTTAAGAAGAAAGATGCGCGTAAGCTAGCTCAAAGCTTTAGTGGTCAAATCCCTAAAACGGGAGTGTTCGGTGGTGTGAAATATTCTGAAGATGCTGATGTTGCTCAAGCTGACGTTGGCATGAACAACAACGAAGATGAGGACGATGAAAATCTTGGTTATAAAAACTACGGAAAGGGTTCGGATACCGAAACTCACCGTTACTTCTCAAGTGAGAAGCCATACAGACCCTAA MTMMKRTLLLFAVFLLLVFTDATMHNVVKKKDARKLAQSFSGQIPKTGVFGGVKYSEDADVAQADVGMNNNEDEDDENLGYKNYGKGSDTETHRYFSSEKPYRP Homology
BLAST of Cp4.1LG17g00170 vs. NCBI nr
Match: KAG6594018.1 (hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026358.1 hypothetical protein SDJN02_12860, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 200 bits (508), Expect = 1.93e-64 Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g00170 vs. NCBI nr
Match: KAG6575119.1 (hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112 bits (281), Expect = 9.07e-30 Identity = 67/110 (60.91%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of Cp4.1LG17g00170 vs. NCBI nr
Match: KAG7013689.1 (hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112 bits (281), Expect = 1.62e-29 Identity = 67/110 (60.91%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of Cp4.1LG17g00170 vs. NCBI nr
Match: TYK02960.1 (uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (276), Expect = 5.07e-29 Identity = 72/110 (65.45%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of Cp4.1LG17g00170 vs. NCBI nr
Match: XP_004150985.1 (uncharacterized protein LOC101207042 [Cucumis sativus] >KGN47457.1 hypothetical protein Csa_021763 [Cucumis sativus]) HSP 1 Score: 110 bits (275), Expect = 6.99e-29 Identity = 69/111 (62.16%), Postives = 77/111 (69.37%), Query Frame = 0
BLAST of Cp4.1LG17g00170 vs. ExPASy TrEMBL
Match: A0A5D3BV16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00430 PE=4 SV=1) HSP 1 Score: 110 bits (276), Expect = 2.46e-29 Identity = 72/110 (65.45%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of Cp4.1LG17g00170 vs. ExPASy TrEMBL
Match: A0A0A0KGD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327960 PE=4 SV=1) HSP 1 Score: 110 bits (275), Expect = 3.39e-29 Identity = 69/111 (62.16%), Postives = 77/111 (69.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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