Cp4.1LG16g09430 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g09430
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-type E3 ubiquitin transferase
Location	Cp4.1LG16: 8679463 .. 8680784 (-)
RNA-Seq Expression	Cp4.1LG16g09430
Synteny	Cp4.1LG16g09430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACGGTGTGTCCAGCGAAAATAATGGTAATAATAATAATAATAGTAATAATGCGCTTGAATCCGATTTTGGATCGGAGCGAGCTTTGTCCCTCTGGGCCCCGATACTGCTGGGTATGATGGGAAATCCCCGTGGGCGTCGTAGATTCAGGCATCTAGAGTTTGACGAAGATGATGATGATAATAATGATCAGGAGCATGGGGATGGGGAGGGGAACCGTGTGAGTAGTGAGCCGACTGAGCTTGATTCGGTCATTAGGAGGAGGAGGAGAAGTTCGGCTACCATTCTACAGTTGCTCCAAGGTATCAGAGCTGGAATGGCAACTGGTGAATCAGAGAATAGTTACGAGGGAGAGAGGAGCAGAGAAAGAGAAAGAGAAAGAGAAAGAGAACGAGAACGAGAAAGAGAGCGGGTTATCCTTATAAATCCTTTCAACCAGACCATTGTAGTTCAAGGAGGTGAGAGTCAAAATCATAACGCTATAGGGTCGCTGGGTGATTATTTCGTAGGACCTGGTTTGGATTTGTTATTGCAACATCTAGCCGAGAATGATCCCAACAGATATGGCACTCCACCAGCCCAGAAGGAGGCAGTTGATGCGCTGCCCACGGTGAGAGTTGAATGCGGGGATAATCGTCTGCAATGTTCGGTGTGTTTGGATGAGTTTGAGATGGATGAAGAAGCCAAGGAGATGCCTTGTAAGCATAAGTTTCATTCAGGGTGTATTCTGCCGTGGCTGGAGCTGCATAGTTCCTGCCCAGTTTGTAGGCATCAATTGCCTGCGGATGAGTCCAAGCGTGATGCGGATGGTGGGTCGGCTAGGTTTATGGGTAGTGGCAGTGGGGAAATTGATGGGAGAAACGCATCTGGGACTGGGAGAAGGTTTTCGTTTCCATGGCCATTCAATGGCTTGTTTTCTTCGCAAGGAAACTCCTCGGGAGGAAGTGAAAGTGAGTCTCAAAGGGATCACACATCCATTTGAATATCTGTGTTTGATATGCTCTGCTTCGCTTCTGCCCTGCTTGCTTATGTATGTGTATGTATGTATGTATGTATGTTATACTTATACTGTACTATGCAGATGTTTTGCCTCCTACTACCCTTAGAACAATCTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCAATTTTACCAACATTTTGTATATGTTATGCCTTTTCACTTCGCCCCTGCTTTCATTGCTATTCTTTCACATCCAATAACAACTACGTATGTATGTATGCAAAAGCTGGAGGCATCCCTTCTAATTCTACAGAGAAGATGCCAAGGCAAGAGGCACCGGTTTATTGA

mRNA sequence

ATGGGAAACGGTGTGTCCAGCGAAAATAATGGTAATAATAATAATAATAGTAATAATGCGCTTGAATCCGATTTTGGATCGGAGCGAGCTTTGTCCCTCTGGGCCCCGATACTGCTGGGTATGATGGGAAATCCCCGTGGGCGTCGTAGATTCAGGCATCTAGAGTTTGACGAAGATGATGATGATAATAATGATCAGGAGCATGGGGATGGGGAGGGGAACCGTGTGAGTAGTGAGCCGACTGAGCTTGATTCGGTCATTAGGAGGAGGAGGAGAAGTTCGGCTACCATTCTACAGTTGCTCCAAGGTATCAGAGCTGGAATGGCAACTGGTGAATCAGAGAATAGTTACGAGGGAGAGAGGAGCAGAGAAAGAGAAAGAGAAAGAGAAAGAGAACGAGAACGAGAAAGAGAGCGGGTTATCCTTATAAATCCTTTCAACCAGACCATTGTAGTTCAAGGAGGTGAGAGTCAAAATCATAACGCTATAGGGTCGCTGGGTGATTATTTCGTAGGACCTGGTTTGGATTTGTTATTGCAACATCTAGCCGAGAATGATCCCAACAGATATGGCACTCCACCAGCCCAGAAGGAGGCAGTTGATGCGCTGCCCACGGTGAGAGTTGAATGCGGGGATAATCGTCTGCAATGTTCGGTGTGTTTGGATGAGTTTGAGATGGATGAAGAAGCCAAGGAGATGCCTTGTAAGCATAAGTTTCATTCAGGGTGTATTCTGCCGTGGCTGGAGCTGCATAGTTCCTGCCCAGTTTGTAGGCATCAATTGCCTGCGGATGAGTCCAAGCGTGATGCGGATGGTGGGTCGGCTAGGTTTATGGGTAGTGGCAGTGGGGAAATTGATGGGAGAAACGCATCTGGGACTGGGAGAAGGTTTTCGTTTCCATGGCCATTCAATGGCTTGTTTTCTTCGCAAGGAAACTCCTCGGGAGGAAGTGAAAATGTTTTGCCTCCTACTACCCTTAGAACAATCTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCAATTTTACCAACATTTTGTATATGTTATGCCTTTTCACTTCGCCCCTGCTTTCATTGCTATTCTTTCACATCCAATAACAACTACGTATGTATGTATGCAAAAGCTGGAGGCATCCCTTCTAATTCTACAGAGAAGATGCCAAGGCAAGAGGCACCGGTTTATTGA

Coding sequence (CDS)

ATGGGAAACGGTGTGTCCAGCGAAAATAATGGTAATAATAATAATAATAGTAATAATGCGCTTGAATCCGATTTTGGATCGGAGCGAGCTTTGTCCCTCTGGGCCCCGATACTGCTGGGTATGATGGGAAATCCCCGTGGGCGTCGTAGATTCAGGCATCTAGAGTTTGACGAAGATGATGATGATAATAATGATCAGGAGCATGGGGATGGGGAGGGGAACCGTGTGAGTAGTGAGCCGACTGAGCTTGATTCGGTCATTAGGAGGAGGAGGAGAAGTTCGGCTACCATTCTACAGTTGCTCCAAGGTATCAGAGCTGGAATGGCAACTGGTGAATCAGAGAATAGTTACGAGGGAGAGAGGAGCAGAGAAAGAGAAAGAGAAAGAGAAAGAGAACGAGAACGAGAAAGAGAGCGGGTTATCCTTATAAATCCTTTCAACCAGACCATTGTAGTTCAAGGAGGTGAGAGTCAAAATCATAACGCTATAGGGTCGCTGGGTGATTATTTCGTAGGACCTGGTTTGGATTTGTTATTGCAACATCTAGCCGAGAATGATCCCAACAGATATGGCACTCCACCAGCCCAGAAGGAGGCAGTTGATGCGCTGCCCACGGTGAGAGTTGAATGCGGGGATAATCGTCTGCAATGTTCGGTGTGTTTGGATGAGTTTGAGATGGATGAAGAAGCCAAGGAGATGCCTTGTAAGCATAAGTTTCATTCAGGGTGTATTCTGCCGTGGCTGGAGCTGCATAGTTCCTGCCCAGTTTGTAGGCATCAATTGCCTGCGGATGAGTCCAAGCGTGATGCGGATGGTGGGTCGGCTAGGTTTATGGGTAGTGGCAGTGGGGAAATTGATGGGAGAAACGCATCTGGGACTGGGAGAAGGTTTTCGTTTCCATGGCCATTCAATGGCTTGTTTTCTTCGCAAGGAAACTCCTCGGGAGGAAGTGAAAATGTTTTGCCTCCTACTACCCTTAGAACAATCTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCAATTTTACCAACATTTTGTATATGTTATGCCTTTTCACTTCGCCCCTGCTTTCATTGCTATTCTTTCACATCCAATAACAACTACGTATGTATGTATGCAAAAGCTGGAGGCATCCCTTCTAATTCTACAGAGAAGATGCCAAGGCAAGAGGCACCGGTTTATTGA

Protein sequence

MGNGVSSENNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGERSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSGEIDGRNASGTGRRFSFPWPFNGLFSSQGNSSGGSENVLPPTTLRTICLLLLLLLLLPLPILPTFCICYAFSLRPCFHCYSFTSNNNYVCMYAKAGGIPSNSTEKMPRQEAPVY

Homology

[Close]

BLAST of Cp4.1LG16g09430 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 8.6e-40
Identity = 83/168 (49.40%), Postives = 104/168 (61.90%), Query Frame = 0


Query: 151 VVQGGES-QNHNAIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPTVRV- 210
           V+Q   S Q      ++GDYF+GPGL+ L+Q LAENDPNRYGTPPA K A++ALP V + 
Sbjct: 154 VIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNIT 213

Query: 211 --ECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFHSGCILPWLELHSSCPVCRHQLPADES 270
                    QC+VC+D+FE   EAK+MPCKH +H  C+LPWLELH+SCPVCRH+LP D+ 
Sbjct: 214 KSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDP 273

Query: 271 K-----RDADGGSARFMGSGSGEIDGRNASGTGR------RFSFPWPF 304
                 R A G S    G   G+  G+ + G  R      R S PWPF
Sbjct: 274 DYERRVRGAQGTS----GGNDGDNSGQRSDGDNRTVERSFRISLPWPF 317

[Close]

BLAST of Cp4.1LG16g09430 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-39
Identity = 110/298 (36.91%), Postives = 159/298 (53.36%), Query Frame = 0


Query: 47  GRRRFRHLEFDEDDDDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRA 106
           G  ++  +E   +  D++D+++  G          E +  IRR RR+S T+ ++L  I  
Sbjct: 55  GFSQWNPIEHPGETMDSDDEDNDLGR---------EFEGFIRRHRRAS-TLRRVLDSIHD 114

Query: 107 GMATGESENSYEGERSRERERERERERERERERVILINPFNQTIVVQGG----------E 166
            +A                        ++ER+  ILIN FNQ + +QG           +
Sbjct: 115 DLAD-----------------------DQERDSSILINAFNQALALQGSVLDPDEGQGDQ 174

Query: 167 SQNHNAIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQ 226
             + N  G L +Y +G GL LLLQHLAE+DP+R GTPPA+KEAV+ALPTV++E     + 
Sbjct: 175 GGSTNDDGLLEEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALPTVKIE---EVVS 234

Query: 227 CSVCLDEFEMDEEAKEMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKRDADGGSAR 286
           CSVCLD+ E+  +AK+MPC+HKFHS CILPWLELHSSCPVCR +LP++E+K   +  +  
Sbjct: 235 CSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEETKDLNEPSNIG 294

Query: 287 FMGSGSGEIDGRNASGTGRRFSFPWP----FNGLFSSQ--GNSSGGSENVLPPTTLRT 329
            +     E+            + PW      N LFS++   N+ G S +   P T  T
Sbjct: 295 RVEDSHEEVRADGPGNVSESSNRPWAIVPWLNELFSTREAQNAGGVSTDQQSPHTSGT 316

[Close]

BLAST of Cp4.1LG16g09430 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.7e-38
Identity = 97/245 (39.59%), Postives = 134/245 (54.69%), Query Frame = 0


Query: 95  ATILQLLQGIRAGMATGESENSYEGERSRERERERERERERER-ERVILINPFNQTI--- 154
           +T+L L+ G  A   +G    S  G   + + R  ++  + +  +    +    QT+   
Sbjct: 80  STLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSS 139

Query: 155 ------VVQGGESQNHNAI-GSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDAL 214
                 V++   S   N + G+ GDYF GPGL+ L+Q LAENDPNRYGTPPA K A+DAL
Sbjct: 140 GTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDAL 199

Query: 215 PTVRVE---CGDNRLQCSVCLDEFEMDEEAKEMPCKHKFHSGCILPWLELHSSCPVCRHQ 274
           PTV+V          QC+VC+DEFE   + K+MPCKH FH  C+LPWLELH+SCPVCR +
Sbjct: 200 PTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFE 259

Query: 275 LPADESKRDADGGSARFMGSGSGEIDGRNASGTGRRFS--FPWPF---NGLFSSQGNSSG 321
           LP D+   +     ++  G G G ++G+       RFS   PWPF   +G  S  G    
Sbjct: 260 LPTDDPDYENRSQGSQGSGDGQGSVEGQQTP----RFSIQLPWPFRRQDGSGSGSGAPGT 319

[Close]

BLAST of Cp4.1LG16g09430 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-28
Identity = 69/166 (41.57%), Postives = 94/166 (56.63%), Query Frame = 0


Query: 164 GSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPTVRV---ECGDNRLQCSVC 223
           G+ GDYF GPGL+ L + L+     R G PPA + A+DALPT+++       +   C VC
Sbjct: 135 GNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVC 194

Query: 224 LDEFEMDEEAKEMPCKHKFHSGCILPWLELHSSCPVCRHQLPA---DESKRDADGGSARF 283
            DEFE+  EAK+MPC H +HS CI+PWL  H+SCPVCR +LP+     S ++    +  +
Sbjct: 195 KDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNY 254

Query: 284 MGSGSGEIDGRNASGTGRR--FSFPWPF--NGLFSSQGNSSGGSEN 320
             S S        +G  RR  FS  WPF  +G  SS   + GG+ N
Sbjct: 255 RSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 299

[Close]

BLAST of Cp4.1LG16g09430 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.7e-27
Identity = 65/156 (41.67%), Postives = 88/156 (56.41%), Query Frame = 0


Query: 167 GDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPTVRV---ECGDNRLQCSVCLDE 226
           GDYF GPGL+ L++ L+    +R G PPA K ++DALPT+++       +   C VC DE
Sbjct: 134 GDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDE 193

Query: 227 FEMDEEAKEMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSG 286
           FE+  EAK+MPC H +HS CI+PWL  H+SCPVCR +LP       + G S+    S + 
Sbjct: 194 FELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP-------SRGSSSSTQSSQNR 253

Query: 287 EIDGRNASGTGRRFSFPWPFNGLFSSQGNSSGGSEN 320
             +GR  S     FS  WPF    SS   +   + N
Sbjct: 254 STNGRENSRRRNIFSNLWPFRSSSSSSTQNRRDTNN 281

[Close]

BLAST of Cp4.1LG16g09430 vs. NCBI nr
Match: XP_023512553.1 (E3 ubiquitin-protein ligase SIRP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 630 bits (1626), Expect = 1.07e-225
Identity = 318/319 (99.69%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MGNGVSSENNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 60
           MGNGVSSENNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD
Sbjct: 39  MGNGVSSENNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 98

Query: 61  DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 120
           DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE
Sbjct: 99  DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 158

Query: 121 RSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 180
           RSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ
Sbjct: 159 RSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 218

Query: 181 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 240
           HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH
Sbjct: 219 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 278

Query: 241 SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSGEIDGRNASGTGRRFSFP 300
           SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSGEIDGRNASGTGRRFSFP
Sbjct: 279 SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSGEIDGRNASGTGRRFSFP 338

Query: 301 WPFNGLFSSQGNSSGGSEN 319
           WPFNGLFSSQGNSSGGSE+
Sbjct: 339 WPFNGLFSSQGNSSGGSES 357

[Close]

BLAST of Cp4.1LG16g09430 vs. NCBI nr
Match: KAG6570309.1 (E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 611 bits (1575), Expect = 3.46e-218
Identity = 312/323 (96.59%), Postives = 315/323 (97.52%), Query Frame = 0


Query: 1   MGNGVSSENNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 60
           MGNG+SS+NNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD
Sbjct: 23  MGNGMSSDNNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 82

Query: 61  DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 120
           DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE
Sbjct: 83  DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 142

Query: 121 RSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 180
           RSRE    RERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ
Sbjct: 143 RSRE----RERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 202

Query: 181 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 240
           HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH
Sbjct: 203 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 262

Query: 241 SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSG----EIDGRNASGTGRR 300
           SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSG    EIDGRNASGTGRR
Sbjct: 263 SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSGSGSGEIDGRNASGTGRR 322

Query: 301 FSFPWPFNGLFSSQGNSSGGSEN 319
           FSFPWPFNGLFSSQGNSSGGSE+
Sbjct: 323 FSFPWPFNGLFSSQGNSSGGSES 341

[Close]

BLAST of Cp4.1LG16g09430 vs. NCBI nr
Match: KAG7010206.1 (E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 611 bits (1575), Expect = 6.25e-218
Identity = 312/323 (96.59%), Postives = 315/323 (97.52%), Query Frame = 0


Query: 1   MGNGVSSENNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 60
           MGNG+SS+NNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD
Sbjct: 39  MGNGMSSDNNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 98

Query: 61  DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 120
           DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE
Sbjct: 99  DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 158

Query: 121 RSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 180
           RSRE    RERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ
Sbjct: 159 RSRE----RERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 218

Query: 181 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 240
           HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH
Sbjct: 219 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 278

Query: 241 SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSG----EIDGRNASGTGRR 300
           SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSG    EIDGRNASGTGRR
Sbjct: 279 SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSGSGSGEIDGRNASGTGRR 338

Query: 301 FSFPWPFNGLFSSQGNSSGGSEN 319
           FSFPWPFNGLFSSQGNSSGGSE+
Sbjct: 339 FSFPWPFNGLFSSQGNSSGGSES 357

[Close]

BLAST of Cp4.1LG16g09430 vs. NCBI nr
Match: XP_022985675.1 (E3 ubiquitin-protein ligase SIRP1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 607 bits (1566), Expect = 1.36e-216
Identity = 307/319 (96.24%), Postives = 312/319 (97.81%), Query Frame = 0


Query: 1   MGNGVSSENNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 60
           MGNG+SS+NNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD
Sbjct: 39  MGNGMSSDNNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 98

Query: 61  DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 120
           D+NN+QEHGDGEGNR SSEP ELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE
Sbjct: 99  DNNNEQEHGDGEGNRASSEPAELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 158

Query: 121 RSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 180
           RSRE  RERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ
Sbjct: 159 RSRE--RERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 218

Query: 181 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 240
           HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH
Sbjct: 219 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 278

Query: 241 SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSGEIDGRNASGTGRRFSFP 300
           SGCILPWLELHSSCPVCRHQLPADESKRD DGGSARFMGSGSGEIDGR ASG GRRFSFP
Sbjct: 279 SGCILPWLELHSSCPVCRHQLPADESKRDTDGGSARFMGSGSGEIDGRTASGIGRRFSFP 338

Query: 301 WPFNGLFSSQGNSSGGSEN 319
           WPFNGLFSSQGNSSGGSE+
Sbjct: 339 WPFNGLFSSQGNSSGGSES 355

[Close]

BLAST of Cp4.1LG16g09430 vs. NCBI nr
Match: XP_022944289.1 (E3 ubiquitin-protein ligase SIRP1-like [Cucurbita moschata])

HSP 1 Score: 602 bits (1551), Expect = 3.15e-214
Identity = 310/324 (95.68%), Postives = 313/324 (96.60%), Query Frame = 0


Query: 1   MGNGVSSENNGNNNNN-SNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDED 60
           MGNG+SS+NNGNNNNN SNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDED
Sbjct: 39  MGNGMSSDNNGNNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDED 98

Query: 61  DDDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEG 120
           DDDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEG
Sbjct: 99  DDDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEG 158

Query: 121 ERSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLL 180
           ERSRE    RERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLL
Sbjct: 159 ERSRE----RERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLL 218

Query: 181 QHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKF 240
           QHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPC+HKF
Sbjct: 219 QHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCRHKF 278

Query: 241 HSGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSG------EIDGRNASGT 300
           HSGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSG      EIDGRNASGT
Sbjct: 279 HSGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSGSGSGSGEIDGRNASGT 338

Query: 301 GRRFSFPWPFNGLFSSQGNSSGGS 317
           GRRFSFPWPFNGLFSSQGNSSGGS
Sbjct: 339 GRRFSFPWPFNGLFSSQGNSSGGS 358

[Close]

BLAST of Cp4.1LG16g09430 vs. ExPASy TrEMBL
Match: A0A6J1JBZ6 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111483664 PE=4 SV=1)

HSP 1 Score: 607 bits (1566), Expect = 6.59e-217
Identity = 307/319 (96.24%), Postives = 312/319 (97.81%), Query Frame = 0


Query: 1   MGNGVSSENNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 60
           MGNG+SS+NNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD
Sbjct: 39  MGNGMSSDNNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 98

Query: 61  DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 120
           D+NN+QEHGDGEGNR SSEP ELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE
Sbjct: 99  DNNNEQEHGDGEGNRASSEPAELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 158

Query: 121 RSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 180
           RSRE  RERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ
Sbjct: 159 RSRE--RERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 218

Query: 181 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 240
           HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH
Sbjct: 219 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 278

Query: 241 SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSGEIDGRNASGTGRRFSFP 300
           SGCILPWLELHSSCPVCRHQLPADESKRD DGGSARFMGSGSGEIDGR ASG GRRFSFP
Sbjct: 279 SGCILPWLELHSSCPVCRHQLPADESKRDTDGGSARFMGSGSGEIDGRTASGIGRRFSFP 338

Query: 301 WPFNGLFSSQGNSSGGSEN 319
           WPFNGLFSSQGNSSGGSE+
Sbjct: 339 WPFNGLFSSQGNSSGGSES 355

[Close]

BLAST of Cp4.1LG16g09430 vs. ExPASy TrEMBL
Match: A0A6J1FWF9 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111448781 PE=4 SV=1)

HSP 1 Score: 602 bits (1551), Expect = 1.52e-214
Identity = 310/324 (95.68%), Postives = 313/324 (96.60%), Query Frame = 0


Query: 1   MGNGVSSENNGNNNNN-SNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDED 60
           MGNG+SS+NNGNNNNN SNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDED
Sbjct: 39  MGNGMSSDNNGNNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDED 98

Query: 61  DDDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEG 120
           DDDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEG
Sbjct: 99  DDDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEG 158

Query: 121 ERSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLL 180
           ERSRE    RERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLL
Sbjct: 159 ERSRE----RERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLL 218

Query: 181 QHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKF 240
           QHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPC+HKF
Sbjct: 219 QHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCRHKF 278

Query: 241 HSGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSG------EIDGRNASGT 300
           HSGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSG      EIDGRNASGT
Sbjct: 279 HSGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMGSGSGSGSGSGEIDGRNASGT 338

Query: 301 GRRFSFPWPFNGLFSSQGNSSGGS 317
           GRRFSFPWPFNGLFSSQGNSSGGS
Sbjct: 339 GRRFSFPWPFNGLFSSQGNSSGGS 358

[Close]

BLAST of Cp4.1LG16g09430 vs. ExPASy TrEMBL
Match: A0A6J1JDY5 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111483664 PE=4 SV=1)

HSP 1 Score: 599 bits (1544), Expect = 2.21e-213
Identity = 307/330 (93.03%), Postives = 312/330 (94.55%), Query Frame = 0


Query: 1   MGNGVSSENNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 60
           MGNG+SS+NNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD
Sbjct: 39  MGNGMSSDNNGNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDD 98

Query: 61  DDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 120
           D+NN+QEHGDGEGNR SSEP ELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE
Sbjct: 99  DNNNEQEHGDGEGNRASSEPAELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGE 158

Query: 121 RSRERERERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 180
           RSRE  RERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ
Sbjct: 159 RSRE--RERERERERERERVILINPFNQTIVVQGGESQNHNAIGSLGDYFVGPGLDLLLQ 218

Query: 181 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 240
           HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH
Sbjct: 219 HLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFH 278

Query: 241 SGCILPWLELHSSCPVCRHQLPADESKRDADGGSARFMG-----------SGSGEIDGRN 300
           SGCILPWLELHSSCPVCRHQLPADESKRD DGGSARFMG           SGSGEIDGR 
Sbjct: 279 SGCILPWLELHSSCPVCRHQLPADESKRDTDGGSARFMGELSNGNDSGSGSGSGEIDGRT 338

Query: 301 ASGTGRRFSFPWPFNGLFSSQGNSSGGSEN 319
           ASG GRRFSFPWPFNGLFSSQGNSSGGSE+
Sbjct: 339 ASGIGRRFSFPWPFNGLFSSQGNSSGGSES 366

[Close]

BLAST of Cp4.1LG16g09430 vs. ExPASy TrEMBL
Match: A0A0A0KWR3 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G267990 PE=4 SV=1)

HSP 1 Score: 503 bits (1295), Expect = 1.05e-175
Identity = 271/331 (81.87%), Postives = 289/331 (87.31%), Query Frame = 0


Query: 1   MGNGVSSENN-GNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDED 60
           +GNG+SS+NN  NNNNN+NN LESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFD+D
Sbjct: 39  IGNGISSDNNDNNNNNNNNNELESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDDD 98

Query: 61  DDDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEG 120
           DDDN   EH DGEGNRVSSE TELDSVIRRRR SSATILQLLQGIRAG+AT ESENSYEG
Sbjct: 99  DDDN---EHEDGEGNRVSSETTELDSVIRRRR-SSATILQLLQGIRAGIATAESENSYEG 158

Query: 121 ERSRERERERERERERERERVILINPFNQTIVVQGGESQNHN--AIGSLGDYFVGPGLDL 180
           ERSRE            RERVILINPFNQTIVVQGGE+QN N  +IGSLGDYFVGPGLDL
Sbjct: 159 ERSRE------------RERVILINPFNQTIVVQGGENQNQNQNSIGSLGDYFVGPGLDL 218

Query: 181 LLQHLAENDPNRYGTPPAQKEAVDALPTVRVECG-DNRLQCSVCLDEFEMDEEAKEMPCK 240
           LLQH+AENDPNRYGTPPAQKEAVDALPTVRVE   D+ LQCSVCLDEFE+DEEAKEMPCK
Sbjct: 219 LLQHIAENDPNRYGTPPAQKEAVDALPTVRVELEEDSCLQCSVCLDEFEVDEEAKEMPCK 278

Query: 241 HKFHSGCILPWLELHSSCPVCRHQLPADESKRDADGGSA-RFM-------GSGSGEIDGR 300
           HKFH+GCILPWLELHSSCPVCRHQLP DESKRD DGGSA RFM       G+GSGEI+GR
Sbjct: 279 HKFHTGCILPWLELHSSCPVCRHQLPGDESKRDVDGGSAARFMSDLNNGNGNGSGEIEGR 338

Query: 301 NASGTGRRFSFPWPFNGLFSSQGNSSGGSEN 319
           N+S +GRRFSFPWPFNGLF+SQGNSS GS +
Sbjct: 339 NSSESGRRFSFPWPFNGLFTSQGNSSAGSAS 353

[Close]

BLAST of Cp4.1LG16g09430 vs. ExPASy TrEMBL
Match: A0A1S3BNR7 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103491641 PE=4 SV=1)

HSP 1 Score: 503 bits (1294), Expect = 1.72e-175
Identity = 271/335 (80.90%), Postives = 289/335 (86.27%), Query Frame = 0


Query: 1   MGNGVSSENN-GNNNNNSNNALESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDED 60
           +GNG+SS+NN  NNNNN+NN LESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFD+D
Sbjct: 39  IGNGISSDNNDNNNNNNNNNELESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDDD 98

Query: 61  DDDNNDQEHGDGEGNRVSSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEG 120
           DDDN   EH DGEGN VSSE TELDSVIRRRR SSATILQLLQGIRAG+AT ESENSYEG
Sbjct: 99  DDDN---EHEDGEGNHVSSETTELDSVIRRRR-SSATILQLLQGIRAGIATAESENSYEG 158

Query: 121 ERSRERERERERERERERERVILINPFNQTIVVQGGESQN--HNAIGSLGDYFVGPGLDL 180
           ERSRE            RERVILINPFNQTIVVQGGE+QN  HN+IGSLGDYFVGPGLDL
Sbjct: 159 ERSRE------------RERVILINPFNQTIVVQGGENQNQNHNSIGSLGDYFVGPGLDL 218

Query: 181 LLQHLAENDPNRYGTPPAQKEAVDALPTVRVECG-DNRLQCSVCLDEFEMDEEAKEMPCK 240
           LLQH+AENDPNRYGTPPAQKEAVDALPTVRVE   D+RLQCSVCLDEFE+DEEAKEMPCK
Sbjct: 219 LLQHIAENDPNRYGTPPAQKEAVDALPTVRVELEEDSRLQCSVCLDEFEVDEEAKEMPCK 278

Query: 241 HKFHSGCILPWLELHSSCPVCRHQLPADESKRDADGGSA-RFM-----------GSGSGE 300
           HKFH+GCILPWLELHSSCPVCRHQLP DESKRD DGGSA RFM           G+GSGE
Sbjct: 279 HKFHTGCILPWLELHSSCPVCRHQLPGDESKRDVDGGSAARFMSDLNNGNGNGNGNGSGE 338

Query: 301 IDGRNASGTGRRFSFPWPFNGLFSSQGNSSGGSEN 319
           I+ RN+S +GRRFSFPWPFNGLF+SQGNSS GS +
Sbjct: 339 IEERNSSESGRRFSFPWPFNGLFTSQGNSSAGSAS 357

[Close]

BLAST of Cp4.1LG16g09430 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein )

HSP 1 Score: 309.7 bits (792), Expect = 3.4e-84
Identity = 182/360 (50.56%), Postives = 229/360 (63.61%), Query Frame = 0


Query: 3   NGVSSENNGNNNNNSNNAL------ESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEF 62
           +G   E +GN        +      E+DFG++RALSLWAPILLGMM +PR RRRFR  EF
Sbjct: 33  SGFIEEMSGNGGGGGGRGIRDVQDSETDFGTDRALSLWAPILLGMMSSPRRRRRFRRSEF 92

Query: 63  DEDDDDNNDQ--EHGDGEGNRVSSE-------------------PTELDSVIRRRRRSSA 122
            E++DDN D    + DG GN  ++                      E +S++RRRRRSS 
Sbjct: 93  GEENDDNGDDLTTNADGNGNDSNNSNNNVYRHHRARRHGGEIDLDREFESILRRRRRSSG 152

Query: 123 TILQLLQGIRAGMATGESENSYEGERSRERERERERERERERERVILINPFNQTIVVQGG 182
            ILQLLQGIRAG+A+ E E+S           +   +  RER+RVI+INP+NQ++VV   
Sbjct: 153 NILQLLQGIRAGIAS-EYESS-----------DNNWDNSRERDRVIMINPYNQSLVVPSD 212

Query: 183 ESQNHNAIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRL 242
           ++QNH ++ SLGDYF+GPGLDLLLQHLAENDPNR GTPPA+KEAV+ALPTV++      L
Sbjct: 213 QNQNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIM---EPL 272

Query: 243 QCSVCLDEFEMDEEAKEMPCKHKFHSGCILPWLELHSSCPVCRHQLPA-----DESKRDA 302
           QCSVCLD+FE   EAKEMPCKHKFH  CI+PWLELHSSCPVCR +LP+     DE+K D+
Sbjct: 273 QCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDS 332

Query: 303 D-------------GGSARFMGSGSGEIDGRNASGTGRRFSFPWPFNGLFSSQGNSSGGS 318
           +             G     +G+     +    SG GRRFSFPWPF+GLFSS  +SS  +
Sbjct: 333 ERVLRTRNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSFPWPFSGLFSSSSSSSSST 377

[Close]

BLAST of Cp4.1LG16g09430 vs. TAIR 10
Match: AT4G26400.2 (RING/U-box superfamily protein )

HSP 1 Score: 256.9 bits (655), Expect = 2.6e-68
Identity = 162/342 (47.37%), Postives = 212/342 (61.99%), Query Frame = 0


Query: 5   VSSENNGNNNNNSNNAL--ESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDD 64
           +S E NG ++++       E DFG++RALSLW PILLGMM NPR RRRFR  EF  D+D+
Sbjct: 35  MSREINGGSSSSLREVQDPEIDFGTDRALSLWGPILLGMMSNPRRRRRFRRTEFGVDNDE 94

Query: 65  NNDQEHGDG------------------EGNRVSSEPTELDSVIRRRRRSSATILQLLQGI 124
            N  +  DG                  +G  +  +  E +S++RRRRRSSATILQLLQGI
Sbjct: 95  VNVSDDVDGNDSVDIDRHHHRRHRHRQQGREIDLD-REFESILRRRRRSSATILQLLQGI 154

Query: 125 RAGMATGESENSYEGERSRERERERERERERERERVILINPFNQTIVVQGGESQNHN--- 184
           RAG+A+ E E+S                     +R +L    NQ+ VVQG  S N N   
Sbjct: 155 RAGIAS-EYESS---------------------DRDLL----NQSAVVQGSTSLNQNRNN 214

Query: 185 -AIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVC 244
            ++ ++GDYFVG  LD LL+HLA+ND  R+G+ PA+KE VD LPTV++      LQCS+C
Sbjct: 215 TSLSAIGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKI---SESLQCSIC 274

Query: 245 LDEFEMDEEAKEMPCKHKFHSGCILPWLELHSSCPVCRHQLPA-DESKRDADGGSARFM- 304
           LD+F+   EAKEMPCKHKFH  CI+PWLELHSSCPVCR++LP  DE+K +      R + 
Sbjct: 275 LDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDETKVNPVRPRTRTLE 334

Query: 305 ---GSGSGEIDGRNASGTGRRFSFPWPFNGLFSSQGNSSGGS 318
               + + E D RN++ + RRFSFPWPF+GLFSS  +SS  +
Sbjct: 335 INVSNENVEDDARNSNVSERRFSFPWPFSGLFSSSSSSSASA 346

[Close]

BLAST of Cp4.1LG16g09430 vs. TAIR 10
Match: AT4G26400.1 (RING/U-box superfamily protein )

HSP 1 Score: 256.9 bits (655), Expect = 2.6e-68
Identity = 162/342 (47.37%), Postives = 212/342 (61.99%), Query Frame = 0


Query: 5   VSSENNGNNNNNSNNAL--ESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDD 64
           +S E NG ++++       E DFG++RALSLW PILLGMM NPR RRRFR  EF  D+D+
Sbjct: 35  MSREINGGSSSSLREVQDPEIDFGTDRALSLWGPILLGMMSNPRRRRRFRRTEFGVDNDE 94

Query: 65  NNDQEHGDG------------------EGNRVSSEPTELDSVIRRRRRSSATILQLLQGI 124
            N  +  DG                  +G  +  +  E +S++RRRRRSSATILQLLQGI
Sbjct: 95  VNVSDDVDGNDSVDIDRHHHRRHRHRQQGREIDLD-REFESILRRRRRSSATILQLLQGI 154

Query: 125 RAGMATGESENSYEGERSRERERERERERERERERVILINPFNQTIVVQGGESQNHN--- 184
           RAG+A+ E E+S                     +R +L    NQ+ VVQG  S N N   
Sbjct: 155 RAGIAS-EYESS---------------------DRDLL----NQSAVVQGSTSLNQNRNN 214

Query: 185 -AIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPTVRVECGDNRLQCSVC 244
            ++ ++GDYFVG  LD LL+HLA+ND  R+G+ PA+KE VD LPTV++      LQCS+C
Sbjct: 215 TSLSAIGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKI---SESLQCSIC 274

Query: 245 LDEFEMDEEAKEMPCKHKFHSGCILPWLELHSSCPVCRHQLPA-DESKRDADGGSARFM- 304
           LD+F+   EAKEMPCKHKFH  CI+PWLELHSSCPVCR++LP  DE+K +      R + 
Sbjct: 275 LDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDETKVNPVRPRTRTLE 334

Query: 305 ---GSGSGEIDGRNASGTGRRFSFPWPFNGLFSSQGNSSGGS 318
               + + E D RN++ + RRFSFPWPF+GLFSS  +SS  +
Sbjct: 335 INVSNENVEDDARNSNVSERRFSFPWPFSGLFSSSSSSSASA 346

[Close]

BLAST of Cp4.1LG16g09430 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 1.7e-67
Identity = 148/313 (47.28%), Postives = 192/313 (61.34%), Query Frame = 0


Query: 32  SLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNNDQEHGDGEGNRVSSEPTELDSVIRRRR 91
           SLWAPIL+ +M +P  RRR + +E  ED+ +    E+ + +G   +    +L  ++RRRR
Sbjct: 58  SLWAPILMELMNDPVRRRRNQSVESVEDNQNEVQTENNEDDGE--NDLDWQLQEILRRRR 117

Query: 92  RSSATILQLLQGIRAGMATGESENSYEGERSRERERERERERERERERVILINPFNQTIV 151
           R SA +LQLLQGIRAG++  ESE++  G  +                RVILIN  NQTI 
Sbjct: 118 RHSAAVLQLLQGIRAGLSV-ESESTGNGGNN--------------PGRVILINTSNQTIT 177

Query: 152 VQGGESQNHNAIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPTVRVECG 211
           VQ     +    GSLGDYF+GPG ++LLQ LAENDPNRYGTPPA+KEAV+AL TV++E  
Sbjct: 178 VQNSADMDSVPAGSLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIE-- 237

Query: 212 DNRLQCSVCLDEFEMDEEAKEMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKRDAD 271
              LQCSVCLD+FE+  EAK MPC HKFHS C+LPWLELHSSCPVCR+QLPADE+K D+ 
Sbjct: 238 -ETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSV 297

Query: 272 GGSARFMGSGSG-------------------------EIDGRNASGTGRRFSFPWPFNGL 320
             ++   GS S                          E +  N +  G  FS PWPF+ L
Sbjct: 298 TTTSDNNGSSSASATTSHGAENSDGNRRQEEEEEEEEEEEEENENNDGSGFSIPWPFSTL 350

[Close]

BLAST of Cp4.1LG16g09430 vs. TAIR 10
Match: AT3G13430.1 (RING/U-box superfamily protein )

HSP 1 Score: 205.7 bits (522), Expect = 6.9e-53
Identity = 124/260 (47.69%), Postives = 158/260 (60.77%), Query Frame = 0


Query: 21  LESDFGSERALSLWAPILLGMMGNPRGRRRFRHLE----FDEDDDDNNDQEHGDGEGNRV 80
           ++++   + A SLW PIL+ MM N   +      +     +++D+D +D + GD   +  
Sbjct: 40  MDNNDDHQAADSLWTPILMEMMNNNHDQHSTNQEDSESILEDEDEDEDDGDDGDQNNDGE 99

Query: 81  SSEPTELDSVIRRRRRSSATILQLLQGIRAGMATGESENSYEGERSRERERERERERERE 140
                +L+ + R R R S  I+ LLQGIRAG+   ESEN+               +    
Sbjct: 100 IDITHQLEEIRRIRTRHSTAIVNLLQGIRAGLLI-ESENN--------------EDNPDN 159

Query: 141 RERVILINPFNQTI-VVQGGESQNHNAIGSLGDYFVGPGLDLLLQHLAEND-PNRYGTPP 200
            E V+LIN FNQ I V Q          GSLGDYF+GPG + LLQ LAEND  NRYGTPP
Sbjct: 160 SELVVLINSFNQRIRVHQDSVDTTSVPSGSLGDYFIGPGFETLLQRLAENDLNNRYGTPP 219

Query: 201 AQKEAVDALPTVRVECGDNRLQCSVCLDEFEMDEEAKEMPCKHKFHSGCILPWLELHSSC 260
           A KEAV+AL  V++E  D+ LQCSVCLD+FE+  EAKEMPCKHKFHS C+LPWLELHSSC
Sbjct: 220 ATKEAVEALAMVKIE--DSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSC 279

Query: 261 PVCRHQLPA---DESKRDAD 272
           PVCR+ LP    DE K DA+
Sbjct: 280 PVCRYLLPTGDDDEPKTDAE 282

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g09430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH30	8.6e-40	49.40	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q6AVN2	1.1e-39	36.91	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q8LPN7	4.7e-38	39.59	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
O22197	1.5e-28	41.57	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	3.7e-27	41.67	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]

BLAST of Cp4.1LG16g09430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512553.1	1.07e-225	99.69	E3 ubiquitin-protein ligase SIRP1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6570309.1	3.46e-218	96.59	E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7010206.1	6.25e-218	96.59	E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022985675.1	1.36e-216	96.24	E3 ubiquitin-protein ligase SIRP1-like isoform X2 [Cucurbita maxima]	[more]
XP_022944289.1	3.15e-214	95.68	E3 ubiquitin-protein ligase SIRP1-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG16g09430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBZ6	6.59e-217	96.24	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111483664 P...	[more]
A0A6J1FWF9	1.52e-214	95.68	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111448781...	[more]
A0A6J1JDY5	2.21e-213	93.03	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111483664 P...	[more]
A0A0A0KWR3	1.05e-175	81.87	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G267990 PE...	[more]
A0A1S3BNR7	1.72e-175	80.90	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103491641 PE=4 ...	[more]

BLAST of Cp4.1LG16g09430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56340.1	3.4e-84	50.56	RING/U-box superfamily protein	[more]
AT4G26400.2	2.6e-68	47.37	RING/U-box superfamily protein	[more]
AT4G26400.1	2.6e-68	47.37	RING/U-box superfamily protein	[more]
AT1G55530.1	1.7e-67	47.28	RING/U-box superfamily protein	[more]
AT3G13430.1	6.9e-53	47.69	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 217..257 e-value: 7.0E-8 score: 42.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 216..258 e-value: 9.6E-13 score: 48.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 217..258 score: 12.40076
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 181..264 e-value: 8.7E-21 score: 75.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 18..275
None	No IPR available	PANTHER	PTHR15710:SF22	RING/U-BOX SUPERFAMILY PROTEIN	coord: 18..275
None	No IPR available	CDD	cd16669	RING-H2_RNF181	coord: 216..261 e-value: 2.9828E-23 score: 89.7373
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 212..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g09430.1	Cp4.1LG16g09430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity