Cp4.1LG16g09400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g09400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	branchpoint-bridging protein isoform X1
Location	Cp4.1LG16: 8516273 .. 8522165 (-)
RNA-Seq Expression	Cp4.1LG16g09400
Synteny	Cp4.1LG16g09400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGGAACCGCGTACCGGACGCCGGACGGGAGACACCGTGTTCTGTCTGAAGCCATTCCCAGAGAACTTGGTTATGTGCGGCAATTCTTCATCGTGCGTTCAGTTCTGAAGAAGATAGTGGTTCAGGTAATTTCATTTCTCTTTCGCATGGTTTTCGTTTCGTTGTTGAGATGATTTTGGGTATGGAAAGCAAAATGGAGTTTACTGTTAGCCCCATTCTTCCCAGTGCAACTCCAAAATAAGCAACAAAGTTGTATTTTGCACCAGCATTTCTTGTTAAGCTATGTAATTCCATTGGGAGCAAGAAAATTTGAAGCAATTTCTAATTTCTAATTTCTAATTTCTAATTTCGTTGTCTTTGAGACCAGCAGCTAAGATTTGCAATCTGAGAGGTGGAGGTGTTTTCTTGTAAATATAACATTTGCTAACTTCATGAATCACGATCACAAAGATTATGGCGTTCTAGAGAAATGTGTCAAATGTGATTATAATTTTATTTGTGCTATGTGTACAAGAACAGTCTTTTGCTGTTAATCAAAGCACGGTCGAATGTTGTTCCAGTCTTGTTAACGTGTTCTAGTTAGACAAAAGAGTTTGAGATCATGTTTTATGTAATAGCTAAGTAATTGTTTTTTTTTAATATCCGTGAATGTTGGATATTGCTATATAGAATTTGGTTCCAAGAGGTCCCTTTTACTGACCGATTGTCAAATGAATAGACCATTTCTTCTGTAAAAAATTGTGGTTAAGTTACCTCAGTTAATTAAAAACTTACCAGGCGCCATGTCTGATCTTTCCACGAGCTGATATCCCCTTGCTATTTACCACATGTCATTCTATGAACTGTTATAAAATATTATTATACACAGGGTCATACGAATTTCTTGTTCATTTGATCTATGTTGTTCGGGAATTCTTTACACAAAAGAGTGTAAATGACAATTTCAAGGTTATATGTACTCGTTGATTTCTCATATATGTTTTATATCATATGTTCTTAAGGTGATTGGGGAAGAATATGAGTGCAGAGGTTGAAAAGGCATCTTGTATCGAGTCTAGAAGTGCAAAGATGTCTGGAGCAACTGTTACTTCTGCTGCACCTATGGGAAGCCAAAAGGTTTCCATGTTTGCAGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCAGGGTCTTTGGTTCCCATCTTCCGAGTGAACAAAAAGTTGGGAGGGAATGAATCCGCTAATGGAGAAAATGTGAAACAGACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAGGATACTGCTGTCAGAAAGGGGAGGCTCATAGCTTATCAGGTATTTGTGGATTTCTACTCTTTGTCTTCACCCCGCCGCACTTTTTCGTGTATCAATGGCATGTGTTGAAGTCACATTTCACAATCAATAGAAAACGTGTATTCCCCTCCTTCATCTTGTTTATTCTGTGAGCTTTTGAAGTGCAACGAATCACTACCAATTTGGGGGTTGGTTTATTTGATGTATTATCTGGGATAATTTCCTGCTCAGTCTTCTGTGTGACTGTTTCGCATAGAAGATTCCCATTCCAANTATTTTATTCACTCTGTTCCTCAAGGAAATAGAAACATATGAACTTAATCATTCTGTCACTCAAAGATAACCATGTTTTATGTCTCGATCATAACTTTTCCTATTTCACATAGGATGAGACTTGGAATGATTTTTTTCTTTTTTTCTTTTTTTCTTTCTTTGAAGGAAAAAGAAAATTTTCGTTAATGACATGGAAAATTGCAAGAAAGTAGCAGGAAGGGTATCTAATTATAGCACTGTATTTCTCGTTTTCACAAGTCAATCATGATCTTTTAATGTCCCCCTACTACATGAGGATCATTCACTTCATTTATAAAATCCCATCATGCTAGGAAATATTTTCCTTCGCCAAATGGAATCTATATATTGCGAATTTAGTGAACTTATTTCATGTTAAAGTTGAGAATTCTACCTTCTGAGGAGGTGCCGAAGTAACGGAGAGATCTCATAATCATCTTCTCCAATGTGATGTTTAAAATGCTCCAGTGCATTGGAGATTTTTGCTCATTCGTTCTGAGTTCCCTCCGTTTATGTAGTTTTTGTAGACCAGTTTAAGCTATTGTTTCCCTGATCATATGGAATTTACCTCGTAGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGGTAAAAAAAAGCATTTTAGATTATGAGATGTTGTACTAAAGATTATCTCTGTTTCATAAACTTTTAATAGATATTTCCTTCACTAAATATGTCAGGAGACTGGAGCCAAAATACGAATTTGCGGTATTAAAGCAGGGACAGGTGAAAAGGTGAACCCTTAGATCATGAAAGTCAAAAATATTTTTCTGATGAAATGANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATAATGGAACTGTTGTTTTAAGAAAATAAGAACAAATAAATGTATAACTGTCATTATTTTGTATGATTTTGATGTATGCCTTCTTCAGAATATACAGGCGCTGAACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTATACTTAGTTAGCGACTTGTTTTTATTATGTCCTCGAATTGAATTATTTTTGTTATCTGTAGAAATTTTATTGCTGATACAGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGCTTACTTCTCCCGGTAAGATTGGTCTTGGATTACTTTTCTTCTGTGGTTAGTGAATATATTAACCTTTTATTTTATTCACTCTGTTCCTCAAGGAAATAGAAACATATGAACTTAATCATTCTGTCACTCAAAGATAACCATGTTTTATGTCTCGATCATAACTTTTCCTATTTCACATAGGATGAGACTTGGAATGATTTTTTTCTTTTTTTCTTTTTTTCTTTCTTTGAAGGAAAAAGAAAATTTTCGTTAATGACATGGAAAATTGCAAGAAAGTAGCAGGAAGGGTATCTAATTATAGCACTGTATTTCTCGTTTTCACAAGTCAATCATGATCTTTTAATGTCCCCCTACTACATGAGGATCATTCACTTCATTTATAAAATCCCATCATGCTAGGAAATATTTTCCTTCGCCAAATGGAATCTATATATTGCGAATTTAGTGAACTTATTTCATGTTAAAGTTGAGAATTCTACCTTCTGAGGAGGTGCCGAAGTAACGGAGAGATCTCATAATCATCTTCTCCAATGTGATGTTTAAAATGCTCCAGTGCATTGGAGATTTTTGCTCATTCGTTCTGAGTTCCCTCCGTTTATGTAGTTTTTGTAGACCAGTTTAAGCTATTGTTTCCCTGATCATATGGAATTTACCTCGTAGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGGTAAAAAAAAGCATTTTAGATTATGAGATGTTGTACTAAAGATTATCTCTGTTTCATAAACTTTTAATAGATATTTCCTTCACTAAATATGTCAGGAGACTGGAGCCAAAATACGAATTTGCGGTATTAAAGCAGGGACAGGTGAAAAGGTGAACCCTTAGATCATGAAAGTCAAAAATATTTTTCTGATGAAATGAAAGTCATAATATGTTCTATACTGCAAAGTAAAGCCGAAGGACCATATTTTTAGAATCTGGGACATGACAATATTTTTACTCTTTTTGCTTCCCCCACCTTCCCTTATTCTTACAGGACGAAATTAAACCAACTGATGTACACGAAACTCAGAACGCTTATGAAGAGCTGTATGTTTGCATATCAGCTGATACATTTGATAAGATTGATGCTGCAATTTCTGTTATTGAACTCCTAATCACCTCAATATCGGTTAGTCATTTGCTTCAAGTAAAGAACTGATCTCCACGGTTTTCATCTTATTTTAGACAATTTTTCTCATTATTTATAACTCATTGCCTTCGTCTCACAGGGAAATCTGGCCACTGGCTCCACATTGTCTGACTTGGTTTCTACGGAGGAAAGTTCTTCCAGCCGAGCCGAGGGTACTACAGTCTCAAATATGGGGCAGACTCCTGTGCCGAACCAGGGGGTTATGCATCAACTACAAGTTTATGCGCCAACTCCGATGCAAGGCCAGTTTCGCTATCCTAGTGCATGGCCTTCTCACAATTTACCGCCTGCTCCTGCATTTATTTCCCCACAAGATCCTCCGTCATCATTTTCTCGTCCACCTGCTCCAGTTGCTTTCAATCCAGCTTTCCGGGGCCCTCCTGTTCCTCCTCCAAGACAGCAGTTTCCTGCACAGGACTTGCAGCAACCTTTCATGACTCAAACCAGTCACGTTGGCCAACCCAGAGTAAATGCTTTGACAATGCAACGCCCCTCATTGGTTCCTTCTAATGTCTCAAATCCAAACTTCACTGGTAGTGGTCAATTACCTTCAGGACCACTCCCGAATATGGCAGGATCATCAATTCCCTCAGCTTTGCCTCAACTTGTTCCTGGTAGCATTCCTCCTGGACCACGGCCTGACCGTCCATTAGCACCTAGCATAGTTTCTACTGGTTTTTCTGGTCCCGCAGTTGGCAGCTCAGCATCTATGGGTCCAAATAACATGGGGCAGATGGCTCTATCGATTGCCCCACCCTTTCTGCCTCGTGCAGCTCCACCGCAGGGTGTTAATTCTTCTGGCACAGCATCTGCAAATGCAGCAGTAGCCAATGTGGATGGATATGCATCTTTTACTTCTGGGCCGCCCACCCCCCAAGCCATGAGTATACATAAAAATCACCCTATTACACCTCCAATTCCGTCACCCCAGATGGGGCATCGCCCACCATTTGCAGCACATAATCCTGCTGGTAACTTCATTGCTGGATCTGCTTCAACCCCTCCAACACCACCTACCAATACCAGCAATTTTACATTCCAACCACGTGGTCCACAAAATCCATCTCCTCAAACAATTCTGAATTTAAACATTCAAAACACACCTACCGTACCTACATTGCAACAGCCTGCATCTGGGGCGCCATCTTTCCATCCAGCAGCCCCAAATTTTGTGAGAGCTGCCAATCAACCCTTTCCCGGACCCCAAGCTGGCAGCCAGATAGGTAATCGTCAAATTCAAGAGGTAGCTTCAAATCCTATTGGCATGCAGGTCTCGGCTAGGATTCCTGCTTTCCTCGATCAAGGTCCTCGAACACAACTGCATCAAAGAAACTTTGGTCCAGCCATGCAAATGCAAATGCAAATGCCGAACTTGCCAGGCAATTTTACTCACAGACCCGGGAACCCCATGCAACTTGAACAATGTTTCCCCATGCGAGCTCCTCGACCTGAAGTCCGCTTTCCTCCCCCACAGTACAGTAGCAATCTGGCGTTTGTTTCTAGTAGGCCACCTCCCATTTCCGGTGGGCAGCAAGTTTATGATCCATTCTCGCCTACATCTGTAGCTGGCACACAACAGCAGGGGAGCAATCCGCCAAGGTGAAAACTGCTGAAGTGCATTGGGTGTTTGTAGTTGCACTTTTACGACAGAGGGAAAAGCTCAGATAGCCTTCTAAGGCCCGAATGAGCACTCTTTGCTGATATATAAAAGTTAACTTTTGTATTCATGTTTCGCTAAAAAATATGATAGATTTCTTGGAATGGATGTGAGTTGATGCTTTGCTGGTAAATGATAGTCGTACCCTTTCAATGGATCCTATGAGGGGCGGGGTTCGATTTTGATAATTTCCTCAGTCATCTTTAAGGC

mRNA sequence

CAAAGGAACCGCGTACCGGACGCCGGACGGGAGACACCGTGTTCTGTCTGAAGCCATTCCCAGAGAACTTGGTTATGTGCGGCAATTCTTCATCGTGCGTTCAGTTCTGAAGAAGATAGTGGTTCAGGTGATTGGGGAAGAATATGAGTGCAGAGGTTGAAAAGGCATCTTGTATCGAGTCTAGAAGTGCAAAGATGTCTGGAGCAACTGTTACTTCTGCTGCACCTATGGGAAGCCAAAAGGTTTCCATGTTTGCAGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCAGGGTCTTTGGTTCCCATCTTCCGAGTGAACAAAAAGTTGGGAGGGAATGAATCCGCTAATGGAGAAAATGTGAAACAGACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAGGATACTGCTGTCAGAAAGGGGAGGCTCATAGCTTATCAGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGAATATACAGGCGCTGAACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGCTTACTTCTCCCGGTAAGATTGGTCTTGGATTACTTTTCTTCTGTGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGGAGACTGGAGCCAAAATACGAATTTGCGGTATTAAAGCAGGGACAGGTGAAAAGGACGAAATTAAACCAACTGATGTACACGAAACTCAGAACGCTTATGAAGAGCTGTATGTTTGCATATCAGCTGATACATTTGATAAGATTGATGCTGCAATTTCTGTTATTGAACTCCTAATCACCTCAATATCGGGAAATCTGGCCACTGGCTCCACATTGTCTGACTTGGTTTCTACGGAGGAAAGTTCTTCCAGCCGAGCCGAGGGTACTACAGTCTCAAATATGGGGCAGACTCCTGTGCCGAACCAGGGGGTTATGCATCAACTACAAGTTTATGCGCCAACTCCGATGCAAGGCCAGTTTCGCTATCCTAGTGCATGGCCTTCTCACAATTTACCGCCTGCTCCTGCATTTATTTCCCCACAAGATCCTCCGTCATCATTTTCTCGTCCACCTGCTCCAGTTGCTTTCAATCCAGCTTTCCGGGGCCCTCCTGTTCCTCCTCCAAGACAGCAGTTTCCTGCACAGGACTTGCAGCAACCTTTCATGACTCAAACCAGTCACGTTGGCCAACCCAGAGTAAATGCTTTGACAATGCAACGCCCCTCATTGGTTCCTTCTAATGTCTCAAATCCAAACTTCACTGGTAGTGGTCAATTACCTTCAGGACCACTCCCGAATATGGCAGGATCATCAATTCCCTCAGCTTTGCCTCAACTTGTTCCTGGTAGCATTCCTCCTGGACCACGGCCTGACCGTCCATTAGCACCTAGCATAGTTTCTACTGGTTTTTCTGGTCCCGCAGTTGGCAGCTCAGCATCTATGGGTCCAAATAACATGGGGCAGATGGCTCTATCGATTGCCCCACCCTTTCTGCCTCGTGCAGCTCCACCGCAGGGTGTTAATTCTTCTGGCACAGCATCTGCAAATGCAGCAGTAGCCAATGTGGATGGATATGCATCTTTTACTTCTGGGCCGCCCACCCCCCAAGCCATGAGTATACATAAAAATCACCCTATTACACCTCCAATTCCGTCACCCCAGATGGGGCATCGCCCACCATTTGCAGCACATAATCCTGCTGGTAACTTCATTGCTGGATCTGCTTCAACCCCTCCAACACCACCTACCAATACCAGCAATTTTACATTCCAACCACGTGGTCCACAAAATCCATCTCCTCAAACAATTCTGAATTTAAACATTCAAAACACACCTACCGTACCTACATTGCAACAGCCTGCATCTGGGGCGCCATCTTTCCATCCAGCAGCCCCAAATTTTGTGAGAGCTGCCAATCAACCCTTTCCCGGACCCCAAGCTGGCAGCCAGATAGGTAATCGTCAAATTCAAGAGGTAGCTTCAAATCCTATTGGCATGCAGGTCTCGGCTAGGATTCCTGCTTTCCTCGATCAAGGTCCTCGAACACAACTGCATCAAAGAAACTTTGGTCCAGCCATGCAAATGCAAATGCAAATGCCGAACTTGCCAGGCAATTTTACTCACAGACCCGGGAACCCCATGCAACTTGAACAATGTTTCCCCATGCGAGCTCCTCGACCTGAAGTCCGCTTTCCTCCCCCACAGTACAGTAGCAATCTGGCGTTTGTTTCTAGTAGGCCACCTCCCATTTCCGGTGGGCAGCAAGTTTATGATCCATTCTCGCCTACATCTGTAGCTGGCACACAACAGCAGGGGAGCAATCCGCCAAGGTGAAAACTGCTGAAGTGCATTGGGTGTTTGTAGTTGCACTTTTACGACAGAGGGAAAAGCTCAGATAGCCTTCTAAGGCCCGAATGAGCACTCTTTGCTGATATATAAAAGTTAACTTTTGTATTCATGTTTCGCTAAAAAATATGATAGATTTCTTGGAATGGATGTGAGTTGATGCTTTGCTGGTAAATGATAGTCGTACCCTTTCAATGGATCCTATGAGGGGCGGGGTTCGATTTTGATAATTTCCTCAGTCATCTTTAAGGC

Coding sequence (CDS)

ATGAGTGCAGAGGTTGAAAAGGCATCTTGTATCGAGTCTAGAAGTGCAAAGATGTCTGGAGCAACTGTTACTTCTGCTGCACCTATGGGAAGCCAAAAGGTTTCCATGTTTGCAGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCAGGGTCTTTGGTTCCCATCTTCCGAGTGAACAAAAAGTTGGGAGGGAATGAATCCGCTAATGGAGAAAATGTGAAACAGACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAGGATACTGCTGTCAGAAAGGGGAGGCTCATAGCTTATCAGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGAATATACAGGCGCTGAACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGCTTACTTCTCCCGGTAAGATTGGTCTTGGATTACTTTTCTTCTGTGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGGAGACTGGAGCCAAAATACGAATTTGCGGTATTAAAGCAGGGACAGGTGAAAAGGACGAAATTAAACCAACTGATGTACACGAAACTCAGAACGCTTATGAAGAGCTGTATGTTTGCATATCAGCTGATACATTTGATAAGATTGATGCTGCAATTTCTGTTATTGAACTCCTAATCACCTCAATATCGGGAAATCTGGCCACTGGCTCCACATTGTCTGACTTGGTTTCTACGGAGGAAAGTTCTTCCAGCCGAGCCGAGGGTACTACAGTCTCAAATATGGGGCAGACTCCTGTGCCGAACCAGGGGGTTATGCATCAACTACAAGTTTATGCGCCAACTCCGATGCAAGGCCAGTTTCGCTATCCTAGTGCATGGCCTTCTCACAATTTACCGCCTGCTCCTGCATTTATTTCCCCACAAGATCCTCCGTCATCATTTTCTCGTCCACCTGCTCCAGTTGCTTTCAATCCAGCTTTCCGGGGCCCTCCTGTTCCTCCTCCAAGACAGCAGTTTCCTGCACAGGACTTGCAGCAACCTTTCATGACTCAAACCAGTCACGTTGGCCAACCCAGAGTAAATGCTTTGACAATGCAACGCCCCTCATTGGTTCCTTCTAATGTCTCAAATCCAAACTTCACTGGTAGTGGTCAATTACCTTCAGGACCACTCCCGAATATGGCAGGATCATCAATTCCCTCAGCTTTGCCTCAACTTGTTCCTGGTAGCATTCCTCCTGGACCACGGCCTGACCGTCCATTAGCACCTAGCATAGTTTCTACTGGTTTTTCTGGTCCCGCAGTTGGCAGCTCAGCATCTATGGGTCCAAATAACATGGGGCAGATGGCTCTATCGATTGCCCCACCCTTTCTGCCTCGTGCAGCTCCACCGCAGGGTGTTAATTCTTCTGGCACAGCATCTGCAAATGCAGCAGTAGCCAATGTGGATGGATATGCATCTTTTACTTCTGGGCCGCCCACCCCCCAAGCCATGAGTATACATAAAAATCACCCTATTACACCTCCAATTCCGTCACCCCAGATGGGGCATCGCCCACCATTTGCAGCACATAATCCTGCTGGTAACTTCATTGCTGGATCTGCTTCAACCCCTCCAACACCACCTACCAATACCAGCAATTTTACATTCCAACCACGTGGTCCACAAAATCCATCTCCTCAAACAATTCTGAATTTAAACATTCAAAACACACCTACCGTACCTACATTGCAACAGCCTGCATCTGGGGCGCCATCTTTCCATCCAGCAGCCCCAAATTTTGTGAGAGCTGCCAATCAACCCTTTCCCGGACCCCAAGCTGGCAGCCAGATAGGTAATCGTCAAATTCAAGAGGTAGCTTCAAATCCTATTGGCATGCAGGTCTCGGCTAGGATTCCTGCTTTCCTCGATCAAGGTCCTCGAACACAACTGCATCAAAGAAACTTTGGTCCAGCCATGCAAATGCAAATGCAAATGCCGAACTTGCCAGGCAATTTTACTCACAGACCCGGGAACCCCATGCAACTTGAACAATGTTTCCCCATGCGAGCTCCTCGACCTGAAGTCCGCTTTCCTCCCCCACAGTACAGTAGCAATCTGGCGTTTGTTTCTAGTAGGCCACCTCCCATTTCCGGTGGGCAGCAAGTTTATGATCCATTCTCGCCTACATCTGTAGCTGGCACACAACAGCAGGGGAGCAATCCGCCAAGGTGA

Protein sequence

MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRVNKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVKEYPGYNFIGLIYGPSGENQKRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCISADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSGPLPNMAGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFGPAMQMQMQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEVRFPPPQYSSNLAFVSSRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR

Homology

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BLAST of Cp4.1LG16g09400 vs. ExPASy Swiss-Prot
Match: Q9LU44 (Splicing factor-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SF1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.3e-19
Identity = 55/138 (39.86%), Postives = 81/138 (58.70%), Query Frame = 0


Query: 137 ELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFI 196
           E L  E++E+I +I+K NP++K P DYRP      L +P           +KE+PGYNFI
Sbjct: 210 ERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKLFIP-----------MKEFPGYNFI 269

Query: 197 GLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCISADT 256
           GLI GP G  QKR+E+ETGAKI I G K    E    +  D+    +  E+L+V + A+T
Sbjct: 270 GLIIGPRGNTQKRMERETGAKIVIRG-KGSVKEGRHQQKKDLKYDPSENEDLHVLVEAET 329

Query: 257 FDKIDAAISVIELLITSI 275
            + ++AA  ++E L+  +
Sbjct: 330 QEALEAAAGMVEKLLQPV 335

[Close]

BLAST of Cp4.1LG16g09400 vs. ExPASy Swiss-Prot
Match: Q54BM5 (Branchpoint-bridging protein OS=Dictyostelium discoideum OX=44689 GN=sf1 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 8.5e-15
Identity = 67/197 (34.01%), Postives = 103/197 (52.28%), Query Frame = 0


Query: 117 YGPSGENQKRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLLLPV 176
           Y  +G+     E+ I+    E L+ E+ +++    ++NP+YK P DY+P  ++ +  + +
Sbjct: 130 YDNNGKRSNTREQRIK----EKLQKERHQLVVTAQQINPTYKPPSDYQPPNEKKTRKIYI 189

Query: 177 RLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPT 236
                     +K +P YNFIGLI GP G  QKR+EKE+GAKI I     G G   + KPT
Sbjct: 190 ---------PIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAI----RGKGSSRDGKPT 249

Query: 237 DVHETQNAYEELYVCISADTFDKID-AAISVIELLITSISG-NLATGSTLSDLVSTEESS 296
            +   +N  +EL+V ++ADT D++D A + V E LI    G N      L +L   E + 
Sbjct: 250 KLQFQEN--DELHVLLTADTVDQLDKAEVLVREFLIPVEEGKNEHKRQQLREL--AEMNG 305

Query: 297 SSRAEGTTVSNMGQTPV 312
           + R     + N   TPV
Sbjct: 310 TLRERPAYMGNRSWTPV 305

[Close]

BLAST of Cp4.1LG16g09400 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 6.1e-05
Identity = 95/330 (28.79%), Postives = 126/330 (38.18%), Query Frame = 0


Query: 325 PTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQF 384
           P+P       PS  P    PP+PA  SP  P  +   PP+P   +PA   P  P P    
Sbjct: 41  PSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPAPPS 100

Query: 385 PAQDLQQPFMTQTSHVGQPRVNALTMQRPS-LVPSNVSNPNFTGSGQLPSGPLPNMAGSS 444
           PA     P          P   +     PS   P + S P  + +  LP  P P      
Sbjct: 101 PAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPP--SPAPPLPPSPAPPSPSPP 160

Query: 445 I-PSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMG-QMALSIAPP 504
           + PS  P + P   PP P P  P  P   S     PA     S  P +    +  S APP
Sbjct: 161 VPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPP 220

Query: 505 FLPRAAPPQGVNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMG 564
             P  APP   + +  + +  A  +       +  PP+P   S     P  PP P P   
Sbjct: 221 SPPSPAPPSPPSPAPPSPSPPAPPSP---VPPSPAPPSPAPPSPKPPAPPPPPSPPPPPP 280

Query: 565 HRPPFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPT 624
            RPPF A+ P          +PP+PP + +  T  P  P +PSP + +     +   VP 
Sbjct: 281 PRPPFPANTP-------MPPSPPSPPPSPAPPT--PPTPPSPSPPSPVP---PSPAPVPP 340

Query: 625 LQQPASGAPSFHPA-APNFVRAANQPFPGP 651
              P S APS  P+ AP     +  P P P
Sbjct: 341 SPAPPSPAPSPPPSPAPPTPSPSPSPSPSP 353

[Close]

BLAST of Cp4.1LG16g09400 vs. NCBI nr
Match: XP_023512295.1 (proline-rich protein 36-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1476 bits (3822), Expect = 0.0
Identity = 771/828 (93.12%), Postives = 771/828 (93.12%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVKEYPGYNFIGLIYGPS 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVKEYPGYNFIGLIYGPS
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVKEYPGYNFIGLIYGPS 120

Query: 121 GENQKRLEK----------------------------------------------NIQAL 180
           GENQKRLEK                                              NIQAL
Sbjct: 121 GENQKRLEKETGAKIRICGIKAGTGEKWNCCFKKIRTNKCITVIILYDFDVCLLQNIQAL 180

Query: 181 NNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYN 240
           NNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLLLPV           KEYPGYN
Sbjct: 181 NNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLLLPV-----------KEYPGYN 240

Query: 241 FIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCISA 300
           FIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCISA
Sbjct: 241 FIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCISA 300

Query: 301 DTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQ 360
           DTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQ
Sbjct: 301 DTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQ 360

Query: 361 GVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRG 420
           GVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRG
Sbjct: 361 GVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRG 420

Query: 421 PPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSG 480
           PPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSG
Sbjct: 421 PPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSG 480

Query: 481 PLPNMAGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQM 540
           PLPNMAGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQM
Sbjct: 481 PLPNMAGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQM 540

Query: 541 ALSIAPPFLPRAAPPQGVNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPP 600
           ALSIAPPFLPRAAPPQGVNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPP
Sbjct: 541 ALSIAPPFLPRAAPPQGVNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPP 600

Query: 601 IPSPQMGHRPPFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQ 660
           IPSPQMGHRPPFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQ
Sbjct: 601 IPSPQMGHRPPFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQ 660

Query: 661 NTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIGNRQIQEVASNPIGMQVS 720
           NTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIGNRQIQEVASNPIGMQVS
Sbjct: 661 NTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIGNRQIQEVASNPIGMQVS 720

Query: 721 ARIPAFLDQGPRTQLHQRNFGPAMQMQMQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEV 780
           ARIPAFLDQGPRTQLHQRNFGPAMQMQMQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEV
Sbjct: 721 ARIPAFLDQGPRTQLHQRNFGPAMQMQMQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEV 780

Query: 781 RFPPPQYSSNLAFVSSRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR 782
           RFPPPQYSSNLAFVSSRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR
Sbjct: 781 RFPPPQYSSNLAFVSSRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR 817

[Close]

BLAST of Cp4.1LG16g09400 vs. NCBI nr
Match: KAG7010232.1 (bpb1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1408 bits (3645), Expect = 0.0
Identity = 740/801 (92.38%), Postives = 746/801 (93.13%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVK-------------EY 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQ +             E 
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 P------GYNFIGLIYGPSGENQKRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPP 180
           P        +      GP G N     KNIQALNNELLELEKREVIGEILKLNPSYKAPP
Sbjct: 121 PKTQVSEAEDVDDNSPGPQGNN-----KNIQALNNELLELEKREVIGEILKLNPSYKAPP 180

Query: 181 DYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240
           DYRPLLKEDSL LPV           KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC
Sbjct: 181 DYRPLLKEDSLPLPV-----------KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240

Query: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCISADTFDKIDAAISVIELLITSISGNLATG 300
           GIKAGTGEKDEIKPTDVHETQNAYEELYVC+SADTFDKIDAAISVIELLITSISGNLATG
Sbjct: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATG 300

Query: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360
           STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH
Sbjct: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360

Query: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420
           NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG
Sbjct: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420

Query: 421 QPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSGPLPNMAGSSIPSALPQLVPGSIPPGPR 480
           QPRVNALT+QRPSLVPSNVSNPNFTGSGQLPSGPLPNM GSSIPSALPQLVPGSIPPGPR
Sbjct: 421 QPRVNALTIQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPR 480

Query: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTASAN 540
           PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALS+APPFLPRAAPPQGVNSSGTASAN
Sbjct: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSLAPPFLPRAAPPQGVNSSGTASAN 540

Query: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFIAGSAS 600
           AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFIAGSAS
Sbjct: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSAS 600

Query: 601 TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFVR 660
           TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNF+R
Sbjct: 601 TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMR 660

Query: 661 AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFGPAMQMQ 720
           AANQPFPGPQAGSQIGN QIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNF PAMQMQ
Sbjct: 661 AANQPFPGPQAGSQIGNHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFSPAMQMQ 720

Query: 721 MQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEVRFPPPQYSSNLAFVSSRPPPISGGQQV 780
           MQMPNLPGNFTHRPGN MQLEQCFPMRAPRPEVRF PPQYSSNLAFVS RPPPISGGQQV
Sbjct: 721 MQMPNLPGNFTHRPGNAMQLEQCFPMRAPRPEVRFTPPQYSSNLAFVSGRPPPISGGQQV 780

Query: 781 YDPFSPTSVAGTQQQGSNPPR 782
           YDPFSPTSVAGTQQQGSNPPR
Sbjct: 781 YDPFSPTSVAGTQQQGSNPPR 785

[Close]

BLAST of Cp4.1LG16g09400 vs. NCBI nr
Match: XP_022943634.1 (splicing factor 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1400 bits (3623), Expect = 0.0
Identity = 737/801 (92.01%), Postives = 742/801 (92.63%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVK-------------EY 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQ +             E 
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 P------GYNFIGLIYGPSGENQKRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPP 180
           P        N      GP G N     KNIQALNNELLELEKREVIGEILKLNPSYKAPP
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNN-----KNIQALNNELLELEKREVIGEILKLNPSYKAPP 180

Query: 181 DYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240
           DYRPLLKEDSL LPV           KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC
Sbjct: 181 DYRPLLKEDSLPLPV-----------KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240

Query: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCISADTFDKIDAAISVIELLITSISGNLATG 300
           GIKAGTGEKDEIKPTDVHETQNAYEELYVC+SADTFDKIDAAISVIELLITSISGNLATG
Sbjct: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATG 300

Query: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360
           STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH
Sbjct: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360

Query: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420
           NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG
Sbjct: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420

Query: 421 QPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSGPLPNMAGSSIPSALPQLVPGSIPPGPR 480
           QPRVNALT+QRPSLVPSNVSNPNFTGSGQLPSGPLPNM GSSIPSALPQLVPGSIPPGPR
Sbjct: 421 QPRVNALTVQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPR 480

Query: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTASAN 540
           PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTASAN
Sbjct: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASAN 540

Query: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFIAGSAS 600
           AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFIAGSAS
Sbjct: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSAS 600

Query: 601 TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFVR 660
           TPPTPPTNTSNFTFQPRGPQNPSP TILNLNIQNTPTVPTLQQPASGAPSFHPAAPNF+R
Sbjct: 601 TPPTPPTNTSNFTFQPRGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMR 660

Query: 661 AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFGPAMQMQ 720
           AANQPFPGPQAGSQIGN QIQEVASNPIGMQVSARIPAFLDQGPRTQLHQ NF PAMQMQ
Sbjct: 661 AANQPFPGPQAGSQIGNHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQ 720

Query: 721 MQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEVRFPPPQYSSNLAFVSSRPPPISGGQQV 780
           MQMPNLP NFTHRPGN MQLEQCFPMRAPRPEVRF PP+YSSNLAFVS RPPPISGGQQV
Sbjct: 721 MQMPNLPRNFTHRPGNAMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQV 780

Query: 781 YDPFSPTSVAGTQQQGSNPPR 782
           YDPFSPTSVAGTQQQGSNPPR
Sbjct: 781 YDPFSPTSVAGTQQQGSNPPR 785

[Close]

BLAST of Cp4.1LG16g09400 vs. NCBI nr
Match: XP_022943635.1 (splicing factor 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1391 bits (3601), Expect = 0.0
Identity = 733/801 (91.51%), Postives = 739/801 (92.26%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVK-------------EY 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQ +             E 
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 P------GYNFIGLIYGPSGENQKRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPP 180
           P        N      GP G N+        ALNNELLELEKREVIGEILKLNPSYKAPP
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNNK--------ALNNELLELEKREVIGEILKLNPSYKAPP 180

Query: 181 DYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240
           DYRPLLKEDSL LPV           KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC
Sbjct: 181 DYRPLLKEDSLPLPV-----------KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240

Query: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCISADTFDKIDAAISVIELLITSISGNLATG 300
           GIKAGTGEKDEIKPTDVHETQNAYEELYVC+SADTFDKIDAAISVIELLITSISGNLATG
Sbjct: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATG 300

Query: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360
           STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH
Sbjct: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360

Query: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420
           NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG
Sbjct: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420

Query: 421 QPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSGPLPNMAGSSIPSALPQLVPGSIPPGPR 480
           QPRVNALT+QRPSLVPSNVSNPNFTGSGQLPSGPLPNM GSSIPSALPQLVPGSIPPGPR
Sbjct: 421 QPRVNALTVQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPR 480

Query: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTASAN 540
           PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTASAN
Sbjct: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASAN 540

Query: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFIAGSAS 600
           AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFIAGSAS
Sbjct: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSAS 600

Query: 601 TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFVR 660
           TPPTPPTNTSNFTFQPRGPQNPSP TILNLNIQNTPTVPTLQQPASGAPSFHPAAPNF+R
Sbjct: 601 TPPTPPTNTSNFTFQPRGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMR 660

Query: 661 AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFGPAMQMQ 720
           AANQPFPGPQAGSQIGN QIQEVASNPIGMQVSARIPAFLDQGPRTQLHQ NF PAMQMQ
Sbjct: 661 AANQPFPGPQAGSQIGNHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQ 720

Query: 721 MQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEVRFPPPQYSSNLAFVSSRPPPISGGQQV 780
           MQMPNLP NFTHRPGN MQLEQCFPMRAPRPEVRF PP+YSSNLAFVS RPPPISGGQQV
Sbjct: 721 MQMPNLPRNFTHRPGNAMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQV 780

Query: 781 YDPFSPTSVAGTQQQGSNPPR 782
           YDPFSPTSVAGTQQQGSNPPR
Sbjct: 781 YDPFSPTSVAGTQQQGSNPPR 782

[Close]

BLAST of Cp4.1LG16g09400 vs. NCBI nr
Match: XP_022986681.1 (splicing factor 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1382 bits (3577), Expect = 0.0
Identity = 728/801 (90.89%), Postives = 736/801 (91.89%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVK-------------EY 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQ +             E 
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PGYNFIGLIY------GPSGENQKRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPP 180
           P               GP G N     KNIQALNNELLELEKREVIGEILKLNPSYKAPP
Sbjct: 121 PKTQVSEAEKVDDNSPGPQGNN-----KNIQALNNELLELEKREVIGEILKLNPSYKAPP 180

Query: 181 DYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240
           DYRPLLKEDSL LPV           KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC
Sbjct: 181 DYRPLLKEDSLPLPV-----------KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240

Query: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCISADTFDKIDAAISVIELLITSISGNLATG 300
           GIKAGTGEKDEIKPTDVHETQNAYEELYVC+SADTFDKIDAAISVIELLITSISGNLATG
Sbjct: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATG 300

Query: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360
           STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSH
Sbjct: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSH 360

Query: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420
           NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVG
Sbjct: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVG 420

Query: 421 QPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSGPLPNMAGSSIPSALPQLVPGSIPPGPR 480
           QPRVNALT+QRPSLVPSNVSNPNFTGSGQLPSGPLPNM GSSIPSALPQLV GSIPPGPR
Sbjct: 421 QPRVNALTIQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPR 480

Query: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTASAN 540
           PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTA  N
Sbjct: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGN 540

Query: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFIAGSAS 600
           AAVANVDGYAS+TSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFI+GSAS
Sbjct: 541 AAVANVDGYASYTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSAS 600

Query: 601 TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFVR 660
           TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNFVR
Sbjct: 601 TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVR 660

Query: 661 AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFGPAMQMQ 720
           AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSA IPAFLDQGPRTQL QRNF PAMQMQ
Sbjct: 661 AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQ 720

Query: 721 MQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEVRFPPPQYSSNLAFVSSRPPPISGGQQV 780
           MQMPNLPGNFTHRPGN MQLEQCFPMR PRPEVRF PPQYSSNL FVS RPPPISGGQQV
Sbjct: 721 MQMPNLPGNFTHRPGNAMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQV 780

Query: 781 YDPFSPTSVAGTQQQGSNPPR 782
           YDPFSPTSVAGTQQQGSNPPR
Sbjct: 781 YDPFSPTSVAGTQQQGSNPPR 785

[Close]

BLAST of Cp4.1LG16g09400 vs. ExPASy TrEMBL
Match: A0A6J1FUX8 (splicing factor 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448345 PE=4 SV=1)

HSP 1 Score: 1400 bits (3623), Expect = 0.0
Identity = 737/801 (92.01%), Postives = 742/801 (92.63%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVK-------------EY 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQ +             E 
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 P------GYNFIGLIYGPSGENQKRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPP 180
           P        N      GP G N     KNIQALNNELLELEKREVIGEILKLNPSYKAPP
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNN-----KNIQALNNELLELEKREVIGEILKLNPSYKAPP 180

Query: 181 DYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240
           DYRPLLKEDSL LPV           KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC
Sbjct: 181 DYRPLLKEDSLPLPV-----------KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240

Query: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCISADTFDKIDAAISVIELLITSISGNLATG 300
           GIKAGTGEKDEIKPTDVHETQNAYEELYVC+SADTFDKIDAAISVIELLITSISGNLATG
Sbjct: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATG 300

Query: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360
           STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH
Sbjct: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360

Query: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420
           NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG
Sbjct: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420

Query: 421 QPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSGPLPNMAGSSIPSALPQLVPGSIPPGPR 480
           QPRVNALT+QRPSLVPSNVSNPNFTGSGQLPSGPLPNM GSSIPSALPQLVPGSIPPGPR
Sbjct: 421 QPRVNALTVQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPR 480

Query: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTASAN 540
           PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTASAN
Sbjct: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASAN 540

Query: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFIAGSAS 600
           AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFIAGSAS
Sbjct: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSAS 600

Query: 601 TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFVR 660
           TPPTPPTNTSNFTFQPRGPQNPSP TILNLNIQNTPTVPTLQQPASGAPSFHPAAPNF+R
Sbjct: 601 TPPTPPTNTSNFTFQPRGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMR 660

Query: 661 AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFGPAMQMQ 720
           AANQPFPGPQAGSQIGN QIQEVASNPIGMQVSARIPAFLDQGPRTQLHQ NF PAMQMQ
Sbjct: 661 AANQPFPGPQAGSQIGNHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQ 720

Query: 721 MQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEVRFPPPQYSSNLAFVSSRPPPISGGQQV 780
           MQMPNLP NFTHRPGN MQLEQCFPMRAPRPEVRF PP+YSSNLAFVS RPPPISGGQQV
Sbjct: 721 MQMPNLPRNFTHRPGNAMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQV 780

Query: 781 YDPFSPTSVAGTQQQGSNPPR 782
           YDPFSPTSVAGTQQQGSNPPR
Sbjct: 781 YDPFSPTSVAGTQQQGSNPPR 785

[Close]

BLAST of Cp4.1LG16g09400 vs. ExPASy TrEMBL
Match: A0A6J1FY22 (splicing factor 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448345 PE=4 SV=1)

HSP 1 Score: 1391 bits (3601), Expect = 0.0
Identity = 733/801 (91.51%), Postives = 739/801 (92.26%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVK-------------EY 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQ +             E 
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 P------GYNFIGLIYGPSGENQKRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPP 180
           P        N      GP G N+        ALNNELLELEKREVIGEILKLNPSYKAPP
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNNK--------ALNNELLELEKREVIGEILKLNPSYKAPP 180

Query: 181 DYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240
           DYRPLLKEDSL LPV           KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC
Sbjct: 181 DYRPLLKEDSLPLPV-----------KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240

Query: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCISADTFDKIDAAISVIELLITSISGNLATG 300
           GIKAGTGEKDEIKPTDVHETQNAYEELYVC+SADTFDKIDAAISVIELLITSISGNLATG
Sbjct: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATG 300

Query: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360
           STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH
Sbjct: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360

Query: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420
           NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG
Sbjct: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420

Query: 421 QPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSGPLPNMAGSSIPSALPQLVPGSIPPGPR 480
           QPRVNALT+QRPSLVPSNVSNPNFTGSGQLPSGPLPNM GSSIPSALPQLVPGSIPPGPR
Sbjct: 421 QPRVNALTVQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPR 480

Query: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTASAN 540
           PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTASAN
Sbjct: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASAN 540

Query: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFIAGSAS 600
           AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFIAGSAS
Sbjct: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSAS 600

Query: 601 TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFVR 660
           TPPTPPTNTSNFTFQPRGPQNPSP TILNLNIQNTPTVPTLQQPASGAPSFHPAAPNF+R
Sbjct: 601 TPPTPPTNTSNFTFQPRGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMR 660

Query: 661 AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFGPAMQMQ 720
           AANQPFPGPQAGSQIGN QIQEVASNPIGMQVSARIPAFLDQGPRTQLHQ NF PAMQMQ
Sbjct: 661 AANQPFPGPQAGSQIGNHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQ 720

Query: 721 MQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEVRFPPPQYSSNLAFVSSRPPPISGGQQV 780
           MQMPNLP NFTHRPGN MQLEQCFPMRAPRPEVRF PP+YSSNLAFVS RPPPISGGQQV
Sbjct: 721 MQMPNLPRNFTHRPGNAMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQV 780

Query: 781 YDPFSPTSVAGTQQQGSNPPR 782
           YDPFSPTSVAGTQQQGSNPPR
Sbjct: 781 YDPFSPTSVAGTQQQGSNPPR 782

[Close]

BLAST of Cp4.1LG16g09400 vs. ExPASy TrEMBL
Match: A0A6J1JBW8 (splicing factor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE=4 SV=1)

HSP 1 Score: 1382 bits (3577), Expect = 0.0
Identity = 728/801 (90.89%), Postives = 736/801 (91.89%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVK-------------EY 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQ +             E 
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PGYNFIGLIY------GPSGENQKRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPP 180
           P               GP G N     KNIQALNNELLELEKREVIGEILKLNPSYKAPP
Sbjct: 121 PKTQVSEAEKVDDNSPGPQGNN-----KNIQALNNELLELEKREVIGEILKLNPSYKAPP 180

Query: 181 DYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240
           DYRPLLKEDSL LPV           KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC
Sbjct: 181 DYRPLLKEDSLPLPV-----------KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRIC 240

Query: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCISADTFDKIDAAISVIELLITSISGNLATG 300
           GIKAGTGEKDEIKPTDVHETQNAYEELYVC+SADTFDKIDAAISVIELLITSISGNLATG
Sbjct: 241 GIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATG 300

Query: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSH 360
           STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSH
Sbjct: 301 STLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSH 360

Query: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVG 420
           NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVG
Sbjct: 361 NLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVG 420

Query: 421 QPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSGPLPNMAGSSIPSALPQLVPGSIPPGPR 480
           QPRVNALT+QRPSLVPSNVSNPNFTGSGQLPSGPLPNM GSSIPSALPQLV GSIPPGPR
Sbjct: 421 QPRVNALTIQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPR 480

Query: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTASAN 540
           PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTA  N
Sbjct: 481 PDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGN 540

Query: 541 AAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFIAGSAS 600
           AAVANVDGYAS+TSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFI+GSAS
Sbjct: 541 AAVANVDGYASYTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSAS 600

Query: 601 TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFVR 660
           TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNFVR
Sbjct: 601 TPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVR 660

Query: 661 AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFGPAMQMQ 720
           AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSA IPAFLDQGPRTQL QRNF PAMQMQ
Sbjct: 661 AANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQ 720

Query: 721 MQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEVRFPPPQYSSNLAFVSSRPPPISGGQQV 780
           MQMPNLPGNFTHRPGN MQLEQCFPMR PRPEVRF PPQYSSNL FVS RPPPISGGQQV
Sbjct: 721 MQMPNLPGNFTHRPGNAMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQV 780

Query: 781 YDPFSPTSVAGTQQQGSNPPR 782
           YDPFSPTSVAGTQQQGSNPPR
Sbjct: 781 YDPFSPTSVAGTQQQGSNPPR 785

[Close]

BLAST of Cp4.1LG16g09400 vs. ExPASy TrEMBL
Match: A0A6J1J889 (splicing factor 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE=4 SV=1)

HSP 1 Score: 1377 bits (3564), Expect = 0.0
Identity = 722/793 (91.05%), Postives = 735/793 (92.69%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVKEYPGYNFI--GLIYG 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQ +       +  G +  
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PS---------GENQKRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKE 180
           P           +N    + N +ALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKE
Sbjct: 121 PKTQVSEAEKVDDNSPGPQGNNKALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKE 180

Query: 181 DSLLLPVRLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGE 240
           DSL LPV           KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGE
Sbjct: 181 DSLPLPV-----------KEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGE 240

Query: 241 KDEIKPTDVHETQNAYEELYVCISADTFDKIDAAISVIELLITSISGNLATGSTLSDLVS 300
           KDEIKPTDVHETQNAYEELYVC+SADTFDKIDAAISVIELLITSISGNLATGSTLSDLVS
Sbjct: 241 KDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVS 300

Query: 301 TEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAF 360
           TEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSHNLPPAPAF
Sbjct: 301 TEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAF 360

Query: 361 ISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALT 420
           ISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVGQPRVNALT
Sbjct: 361 ISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALT 420

Query: 421 MQRPSLVPSNVSNPNFTGSGQLPSGPLPNMAGSSIPSALPQLVPGSIPPGPRPDRPLAPS 480
           +QRPSLVPSNVSNPNFTGSGQLPSGPLPNM GSSIPSALPQLV GSIPPGPRPDRPLAPS
Sbjct: 421 IQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPS 480

Query: 481 IVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTASANAAVANVDG 540
           IVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTA  NAAVANVDG
Sbjct: 481 IVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDG 540

Query: 541 YASFTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFIAGSASTPPTPPTN 600
           YAS+TSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFI+GSASTPPTPPTN
Sbjct: 541 YASYTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTN 600

Query: 601 TSNFTFQPRGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPG 660
           TSNFTFQPRGPQNPSPQTILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPG
Sbjct: 601 TSNFTFQPRGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPG 660

Query: 661 PQAGSQIGNRQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFGPAMQMQMQMPNLPG 720
           PQAGSQIGNRQIQEVASNPIGMQVSA IPAFLDQGPRTQL QRNF PAMQMQMQMPNLPG
Sbjct: 661 PQAGSQIGNRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPG 720

Query: 721 NFTHRPGNPMQLEQCFPMRAPRPEVRFPPPQYSSNLAFVSSRPPPISGGQQVYDPFSPTS 780
           NFTHRPGN MQLEQCFPMR PRPEVRF PPQYSSNL FVS RPPPISGGQQVYDPFSPTS
Sbjct: 721 NFTHRPGNAMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTS 780

Query: 781 VAGTQQQGSNPPR 782
           VAGTQQQGSNPPR
Sbjct: 781 VAGTQQQGSNPPR 782

[Close]

BLAST of Cp4.1LG16g09400 vs. ExPASy TrEMBL
Match: A0A6J1DJY7 (branchpoint-bridging protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021231 PE=4 SV=1)

HSP 1 Score: 1089 bits (2816), Expect = 0.0
Identity = 598/824 (72.57%), Postives = 639/824 (77.55%), Query Frame = 0


Query: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEK S IE  + KMSGAT++S APMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIEPGNMKMSGATISSPAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQVKEYPGYNFI--GLIYG 120
           NKK GGNES NGEN KQ QR TKWGPDLTQDTAVRKGRLIAYQ +       +  G +  
Sbjct: 61  NKKSGGNESVNGENDKQAQRKTKWGPDLTQDTAVRKGRLIAYQTRLEQITELLKSGTLEV 120

Query: 121 PSGENQ--------------KRLEKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYR 180
           P  ++               +  +KNIQ  N ELLELEKREVIGEILKLNPSYKAPPDYR
Sbjct: 121 PETQDSALGAENVEDKSPGSQASDKNIQVQNTELLELEKREVIGEILKLNPSYKAPPDYR 180

Query: 181 PLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIK 240
           PLLKED   LPV           KEYPGYNFIGLIYGPSGENQKRLEKETG K+RICGIK
Sbjct: 181 PLLKEDRFPLPV-----------KEYPGYNFIGLIYGPSGENQKRLEKETGVKMRICGIK 240

Query: 241 AGTGEKDEIKPTDVHETQNAYEELYVCISADTFDKIDAAISVIELLITSISGNLATGSTL 300
           A TGEKDEIKPTD HETQNAYEELYV +SADTFDKIDAAISVIELLITSISGNL TGST 
Sbjct: 241 AETGEKDEIKPTDGHETQNAYEELYVYMSADTFDKIDAAISVIELLITSISGNLTTGSTF 300

Query: 301 SDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAW----PS 360
           SDLVSTE SSSS+AEGTT+SN+GQTPVPNQGVM Q+QVYAPT +QGQF YPS W    PS
Sbjct: 301 SDLVSTEVSSSSQAEGTTISNIGQTPVPNQGVMQQVQVYAPTSVQGQFHYPSTWFPAGPS 360

Query: 361 HNLPPAPAFISPQDPPS--------------------SFSRPPAPVAFNPAFRGPPVPPP 420
           HNL PAP FISPQ+PPS                    SF+RPP  + FNPAF GPPV PP
Sbjct: 361 HNLTPAPGFISPQNPPSVRNNPIHLSTPTSNISNVPSSFARPPTQIPFNPAFHGPPVHPP 420

Query: 421 RQQFPAQDLQQPFMTQTSHVGQPRVNALTMQRPSLVPSNVSNPNFTGSGQLPSGPLPNMA 480
           RQQ P QDLQQPFMTQTSHVGQ RV+ LT+QRP LV SNVSNPNFTGSG LPSG LPNM 
Sbjct: 421 RQQLPVQDLQQPFMTQTSHVGQSRVHGLTIQRPPLVQSNVSNPNFTGSGPLPSGLLPNMP 480

Query: 481 GSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAP 540
           GS++PS        SIPP   PDRPLAP +VSTGFSGP VG SAS+GPNNMGQ ALS+AP
Sbjct: 481 GSAVPS--------SIPPASLPDRPLAPIMVSTGFSGPTVGGSASVGPNNMGQTALSLAP 540

Query: 541 PFLPRAAPPQGVNSSGTASANAAVANVDGYASFTSGPPTPQAMSIHKNHPITPPIPSPQM 600
           P  P  A P GVNSSG     AA AN+D Y+SF SGP  PQA  +H N PI  P+PSPQM
Sbjct: 541 PLGPHTALPHGVNSSG-----AAPANMDVYSSFPSGPSNPQATGVHTNRPIAAPVPSPQM 600

Query: 601 GHRPPFA---AHNPAGNFIAGSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTP 660
           GHRPPF+   AHNPAGNFIAGSAS  PTPPTNTSNFTFQPRGPQNP  QTILNLNIQN  
Sbjct: 601 GHRPPFSVPSAHNPAGNFIAGSASNLPTPPTNTSNFTFQPRGPQNPPTQTILNLNIQNPS 660

Query: 661 TVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIGNRQIQEVA-SNPIGMQVSAR 720
           TVPTLQ PASGAPS+HPA PNF R  NQPFPGPQAGSQIGN QIQE+A S+PIGMQ S R
Sbjct: 661 TVPTLQHPASGAPSYHPAGPNFPRVGNQPFPGPQAGSQIGNNQIQEIAASHPIGMQASPR 720

Query: 721 IPAFLDQGPRTQLHQRNFGPAMQMQMQMPNLPGNFTHRPGNPMQLEQCFPMRAPRPEVRF 780
           +PAFLD GPRT LHQRNF PAMQM    PNLPGNF HRPGNPMQLEQ FP+RA RPEVRF
Sbjct: 721 LPAFLDPGPRTPLHQRNFSPAMQM----PNLPGNFPHRPGNPMQLEQGFPIRATRPEVRF 780

[Close]

BLAST of Cp4.1LG16g09400 vs. TAIR 10
Match: AT3G32940.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 205.3 bits (521), Expect = 1.8e-52
Identity = 199/562 (35.41%), Postives = 273/562 (48.58%), Query Frame = 0


Query: 22  TVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIF-RVNKKLGGNESANGENVK-QTQ 81
           T TSAA     K+SMF AK+GFVIPKNKLSGSL+PIF R NK LG  +S  G   K   +
Sbjct: 2   TSTSAA-----KISMFGAKSGFVIPKNKLSGSLIPIFQRGNKTLGSADSDTGPPSKLGKK 61

Query: 82  RNTKWGPDLTQDTAVRKGRLIAYQVKEYPGYNFIGLIYGPSGENQKRLEKNIQAL--NNE 141
           R TKW PDL+QD AV+K R +AYQ +                +  +RLE     +  N  
Sbjct: 62  RKTKWAPDLSQDIAVKKCRFLAYQKR--------------VDQITQRLESGTLEVETNRT 121

Query: 142 LLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFIG 201
            LE EKRE IGEIL+LNP YKAPPDY+PLLKE       RL +D     VKE+  ++F+ 
Sbjct: 122 DLEFEKREAIGEILELNPRYKAPPDYKPLLKE------ARLPID-----VKEHSDFSFLS 181

Query: 202 LIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCISADTF 261
           LI+G  G+ QKRLEKETGAK++I G K G GEK E+ P+D +E Q +++ELY  IS+DT+
Sbjct: 182 LIFGSQGDTQKRLEKETGAKVQIFGTKTG-GEKVELSPSDENEIQKSWQELYFQISSDTY 241

Query: 262 DKIDAAISVIELLITSISGNLATG----STLSDLVSTEESSSSRAEGTTVSNMGQTPVPN 321
           +K+DAAI+V+ELL++S+SGN   G    S++S+++ST   +S      T     +T   +
Sbjct: 242 EKVDAAIAVVELLMSSVSGNTGAGAAPPSSISEIISTIPGNSIAT--ATAPTSERTTDHS 301

Query: 322 QGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQD-PPSSFSRPPAPVAFNPAF 381
           Q + H    +  +         +  P H  PP   F+S           P   +  NP F
Sbjct: 302 QVLQHGSSFHLSS---------NQAPLH--PPLEHFVSGLGYNIQEQELPKNSMNLNPLF 361

Query: 382 RGP--PVP-----PPRQQFPAQDLQQPFMTQTSHVGQPRVNALTMQRPSLVPSNVSNPNF 441
                PVP     PP    P      PF    +    PR  ++T+            P +
Sbjct: 362 AQQLLPVPHDTSLPPGSHVPRPPDSFPFSLSNT----PRTYSVTL------------PPY 421

Query: 442 TGSGQLPSGPLPNMAGSSIPSALPQLVPGSIPPGPRPDRPLAPSIV------STGFSGPA 501
           +GS   P GP   +  S++ +  P   P  +P   +  RPLAP+          G   P+
Sbjct: 422 SGSQIQPIGPRSTVRPSTLFTFHPVHRPTLLPDIDQSVRPLAPNFSPHPVAHQPGTEIPS 481

Query: 502 V------------GSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTASANAAVANV 550
           +            GS +S+ P ++     S  P  L  A PP    S         +   
Sbjct: 482 IPFPSASSLIAEYGSGSSLRPMSVSPHIAS-RPAGLVPAYPPTNTASRPFHGDFGYIPQQ 502

[Close]

BLAST of Cp4.1LG16g09400 vs. TAIR 10
Match: AT5G51300.1 (splicing factor-related )

HSP 1 Score: 98.6 bits (244), Expect = 2.4e-20
Identity = 55/138 (39.86%), Postives = 81/138 (58.70%), Query Frame = 0


Query: 137 ELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFI 196
           E L  E++E+I +I+K NP++K P DYRP      L +P           +KE+PGYNFI
Sbjct: 210 ERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKLFIP-----------MKEFPGYNFI 269

Query: 197 GLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCISADT 256
           GLI GP G  QKR+E+ETGAKI I G K    E    +  D+    +  E+L+V + A+T
Sbjct: 270 GLIIGPRGNTQKRMERETGAKIVIRG-KGSVKEGRHQQKKDLKYDPSENEDLHVLVEAET 329

Query: 257 FDKIDAAISVIELLITSI 275
            + ++AA  ++E L+  +
Sbjct: 330 QEALEAAAGMVEKLLQPV 335

[Close]

BLAST of Cp4.1LG16g09400 vs. TAIR 10
Match: AT5G51300.2 (splicing factor-related )

HSP 1 Score: 98.6 bits (244), Expect = 2.4e-20
Identity = 55/138 (39.86%), Postives = 81/138 (58.70%), Query Frame = 0


Query: 137 ELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFI 196
           E L  E++E+I +I+K NP++K P DYRP      L +P           +KE+PGYNFI
Sbjct: 210 ERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKLFIP-----------MKEFPGYNFI 269

Query: 197 GLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCISADT 256
           GLI GP G  QKR+E+ETGAKI I G K    E    +  D+    +  E+L+V + A+T
Sbjct: 270 GLIIGPRGNTQKRMERETGAKIVIRG-KGSVKEGRHQQKKDLKYDPSENEDLHVLVEAET 329

Query: 257 FDKIDAAISVIELLITSI 275
            + ++AA  ++E L+  +
Sbjct: 330 QEALEAAAGMVEKLLQPV 335

[Close]

BLAST of Cp4.1LG16g09400 vs. TAIR 10
Match: AT5G51300.3 (splicing factor-related )

HSP 1 Score: 98.6 bits (244), Expect = 2.4e-20
Identity = 55/138 (39.86%), Postives = 81/138 (58.70%), Query Frame = 0


Query: 137 ELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLLLPVRLVLDYFSSVVKEYPGYNFI 196
           E L  E++E+I +I+K NP++K P DYRP      L +P           +KE+PGYNFI
Sbjct: 210 ERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKLFIP-----------MKEFPGYNFI 269

Query: 197 GLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCISADT 256
           GLI GP G  QKR+E+ETGAKI I G K    E    +  D+    +  E+L+V + A+T
Sbjct: 270 GLIIGPRGNTQKRMERETGAKIVIRG-KGSVKEGRHQQKKDLKYDPSENEDLHVLVEAET 329

Query: 257 FDKIDAAISVIELLITSI 275
            + ++AA  ++E L+  +
Sbjct: 330 QEALEAAAGMVEKLLQPV 335

[Close]

BLAST of Cp4.1LG16g09400 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 44.7 bits (104), Expect = 4.0e-04
Identity = 23/69 (33.33%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 187 VKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYE 246
           V  YP +NF+G + GP G + KR+E  TG ++ I G  +    + E K       ++  E
Sbjct: 144 VDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNE 203

Query: 247 ELYVCISAD 256
           +L++ I AD
Sbjct: 204 QLHILIEAD 212

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g09400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU44	3.3e-19	39.86	Splicing factor-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SF1 PE=1 SV=1	[more]
Q54BM5	8.5e-15	34.01	Branchpoint-bridging protein OS=Dictyostelium discoideum OX=44689 GN=sf1 PE=3 SV...	[more]
Q9FPQ6	6.1e-05	28.79	Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=...	[more]

BLAST of Cp4.1LG16g09400 vs. NCBI nr


Match Name	Identity	Description
XP_023512295.1	93.12	proline-rich protein 36-like [Cucurbita pepo subsp. pepo]	[more]
KAG7010232.1	92.38	bpb1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022943634.1	92.01	splicing factor 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022943635.1	91.51	splicing factor 1-like isoform X2 [Cucurbita moschata]	[more]
XP_022986681.1	90.89	splicing factor 1-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG16g09400 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1FUX8	92.01	splicing factor 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448345 ...	[more]
A0A6J1FY22	91.51	splicing factor 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448345 ...	[more]
A0A6J1JBW8	90.89	splicing factor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE...	[more]
A0A6J1J889	91.05	splicing factor 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE...	[more]
A0A6J1DJY7	72.57	branchpoint-bridging protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Cp4.1LG16g09400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G32940.1	1.8e-52	35.41	RNA-binding KH domain-containing protein	[more]
AT5G51300.1	2.4e-20	39.86	splicing factor-related	[more]
AT5G51300.2	2.4e-20	39.86	splicing factor-related	[more]
AT5G51300.3	2.4e-20	39.86	splicing factor-related	[more]
AT2G38610.1	4.0e-04	33.33	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 745..782
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 575..608
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 535..608
None	No IPR available	PANTHER	PTHR11208:SF98	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN	coord: 104..129 coord: 26..103 coord: 134..773
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 194..220 score: 8.554656
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 194..226 e-value: 1.2E-4 score: 21.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 55..134 e-value: 1.1E-7 score: 33.9
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 185..282 e-value: 2.7E-22 score: 80.5
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 181..277
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 104..129 coord: 134..773
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 26..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g09400.1	Cp4.1LG16g09400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding